Cited by 5Bacterial Identification and Susceptibility TestingClinical Laboratory Practices and Quality ControlSepsis Diagnosis and Treatment

Lab efficiency and improvements in the management of bloodstream infections: a before and after study

Open access
Paluch, Maxime, Ettahar, Nicolas, Lagraulet, Benjamin, Cattoen, Christian, Rethore, Eric, Dubrulle, Arnaud, Abad, Lélia, Canis, Frédérique +3 more·2025·European Journal of Clinical Microbiology & Infectious Diseases

Abstract

PURPOSE: Early availability of identification of bacterial pathogens and knowledge of their antimicrobial susceptibility is crucial when managing patients with bloodstream infections (BSI). We aimed to assess the impact of the laboratory conversion (full automation and conversion to 24/7 workflow) on laboratory efficiency, timeliness of diagnostic results, and patient outcomes. METHODS: An observational retrospective study was conducted to compare lab organisation, laboratory times including turnaround time (TAT) for positive blood cultures (PBCs), antimicrobial therapy (antibiotic prescription, time to first antibiotic modification), patient outcomes (30-day mortality, hospital and ICU discharge), and antibiotic consumption for pre- and post-conversion periods (January to December 2019 versus June 2021 to May 2022) in adults with BSI admitted to the ICU at the Centre Hospitalier de Valenciennes. Multivariable models were used to compare periods, adjusting for relevant patient characteristics. RESULTS: A total of 116 and 128 PBCs from 104 to 112 patients in pre- and post-conversion were analysed. TAT decreased significantly for clinically significant episodes (median 30.4 (n = 83) versus 27.1 h (n = 84), p = 0.004). The percent of PBCs with antimicrobial susceptibility testing results available within 24 h increased significantly for night shift PBCs (0.9% versus 18.7%; p < 0.0001). A significant reduction in time to first antibiotic modification occurred (median difference of 19.1 h, p = 0.04). Additionally, we observed for the post-conversion a 51% increase in probability of ICU discharge (hazard ratio [HR] = 1.51, 95%CI 1.09‒2.08, p = 0.014) and a trend towards a reduction in 30-day mortality (HR = 0.65, 95%CI 0.40‒1.06, p = 0.085). CONCLUSION: Laboratory reorganisation improved laboratory efficiency, leading to improvements in the management of patients with BSIs. CLINICAL TRIAL NUMBER : Not applicable.

AI snapshot

Written from the paper’s full text.

TL;DR

In a single-centre before-and-after study, converting the microbiology laboratory to full automation and 24/7 workflow was associated with faster bloodstream infection diagnostics and earlier antibiotic modification. Post-conversion patients also had higher probability of ICU discharge and a trend toward lower 30-day mortality.

Key findings

  • Turnaround time for clinically significant episodes decreased from median 30.4 h (n = 83) to 27.1 h (n = 84), p = 0.004.
  • The proportion of night-shift positive blood cultures with antimicrobial susceptibility testing results available within 24 h increased from 0.9% to 18.7% (p < 0.0001).
  • Time to first antibiotic modification was significantly shorter, with a median difference of 19.1 h (p = 0.04); overall median time fell from 69.7 h to 50.6 h.
  • Post-conversion was associated with a 51% increase in probability of ICU discharge (sHR = 1.51, 95%CI 1.09‒2.08, p = 0.014) and a trend toward reduced 30-day mortality (HR = 0.65, 95%CI 0.40‒1.06, p = 0.085); infection-related deaths decreased from 15.4% to 5.3% (p = 0.014).

Methods

  • Single-centre retrospective observational before-and-after study at the ICU and microbiology laboratory of the Centre Hospitalier de Valenciennes, France, comparing pre-conversion January–December 2019 with post-conversion June 2021–May 2022.
  • Included adults ≥18 years admitted to ICU with a positive blood culture caused by bacterial or fungal pathogen(s); analysed 116 pre-conversion and 128 post-conversion BSI episodes in 104 and 112 patients, respectively.
  • The intervention was laboratory automation (WASPLab®) and conversion to 24/7 bacteriology workflow; outcomes included laboratory turnaround times, therapy modification, 30-day mortality, hospital/ICU discharge, and antimicrobial consumption, analysed with multivariable models adjusted for patient characteristics differing at p < 0.20.

Limitations

  • The authors state that the single-centre retrospective pragmatic pre-post design limits generalisability and precludes causal inference due to potential uncontrolled confounding; COVID-19 disruption, higher post-intervention contamination rate, evolving antimicrobial practice, and lack of a priori power calculation are also noted.
  • The authors also report lack of information on appropriate or effective antibiotic therapy, confounding variables, and other infection-management methods such as surgical source control.
  • Evident from the text: the before-and-after observational design cannot separate the laboratory conversion from concurrent temporal or organisational changes, and the study was not randomised.

Model-written summary. Check it against the paper before relying on it.

Integrity signals

Registry

Crossref · 10.1007/s10096-025-05200-x

Cites

25 of 25 references verified0 citation errors · 0 not checkable

Statistics

Nothing to recompute.

Claims the paper makes

22 of 26 cited sources checked · 12 supported · 1 flagged · accuracy not yet measured

  • Premisecitation

    Delays in appropriate treatment were associated with increased 30-day mortality.

    “This is an important improvement, as delays were associated with increased 30-day mortality [11].”
    Quote in the paperSubstantial claim1 of 1 sources checked
    • cites [11] Van Heuverswyn J, Valik JK, van der Desiree S, Hedberg P, Giske C, Naucler P (2023) Association between time to appropriate antimicrobial treatment and 30-day mortality in patients with bloodstream infections: A retrospective cohort study. Clin Infect Dis 76(3):469–478. https://doi.org/10.1093/cid/ciac727 source

      The Conclusions report increased 30-day mortality with delayed appropriate antimicrobial treatment in patients with bloodstream infections, but only after 12 hours from blood culture collection—not at 1, 3, or 6 hours. The citing sentence omits that important timing qualification. (LLM, conf=0.88)

      Experimental — accuracy not yet measured
  • Findingown data

    The percent of PBCs with AST results available within 24 h increased significantly for night shift PBCs (0.9% vs 18.7%, p<0.0001).

    “The percent of PBCs with antimicrobial susceptibility testing results available within 24 h increased significantly for night shift PBCs (0.9% versus 18.7%; p < 0.0001).”
    • Also stated in: § Laboratory efficiency · plain
      “The percent of PBCs with AST results available within 24 h increased significantly for night shift PBCs (0.9% versus 18.7%; p < 0.0001)”
    Quote in the paperSubstantial claim
  • Findingown data

    There was a trend towards a reduction in 30-day mortality post-conversion (HR=0.65, 95%CI 0.40-1.06, p=0.085).

    “and a trend towards a reduction in 30-day mortality (HR = 0.65, 95%CI 0.40‒1.06, p = 0.085).”
    Quote in the paperNot a substantial claim
  • Findingown data

    The percentage of deaths related to infection decreased significantly in the post-conversion period (16 (15.4%) versus 6 (5.3%), p = 0.014).

    “However, the percentage of deaths related to infection decreased significantly in the post-conversion period [16 (15.4%) versus 6 (5.3%), p = 0.014].”
    Quote in the paperSubstantial claim
  • Findingown data

    Between both periods, overall antimicrobial consumption decreased slightly (1667 vs. 1542.1 DDD/1000HD).

    “Between both periods, overall antimicrobial consumption decreased slightly (1667 vs. 1542.1 DDD/1000HD)”
    Quote in the paperNot a substantial claim
  • May combine two claims. 30
  • Classified as probably not a substantial claim. 28
  • May combine two claims.

    Study design and conductown data

    Multivariable models were used to compare periods, adjusting for relevant patient characteristics showing a significant difference between periods at p<0.20.

    “Multivariable models were used to compare periods, adjusting for relevant patient characteristics.”
    • Also stated in: § Statistical analysis · plain
      “Multivariate analyses were used to compare antimicrobial times (linear or log-linear model), 30-day mortality (Cox proportional hazards model), cumulative incidence of ICU and hospital discharge (Fine and Gray sub-distribution hazard model considering death as a competitive risk) between the two periods, adjusting on relevant patient characteristics showing a significant difference between periods”
    Quote in the paperSubstantial claim3 of 3 sources checked
    • cites [5] Brock GN, Barnes C, Ramirez JA, Myers J (2011) How to handle mortality when investigating length of hospital stay and time to clinical stability. BMC Med Res Methodol 11:144. https://doi.org/10.1186/1471-2288-11-144 source

      The Discussion states that the authors did not address incorporating additional risk factors through regression models. The Methods section instead describes tests comparing patient groups, not multivariable models adjusting for patient characteristics. No page numbers are available in our copy. (LLM, conf=0.88)

      Checked by a reasoning model — may be wrong.

      Experimental — accuracy not yet measured
    • cites [6] Keene CM, Dondorp A, Crawley J, Ohuma EO, Mukaka M (2018) A Competing-Risk approach for modeling length of stay in severe malaria patients in South-East Asia and the implications for planning of hospital services. Clin Infect Dis 67(7):1053–1062. https://doi.org/10.1093/cid/ciy211 source

      The Methods (Statistical Methods; page unavailable) confirm that the paper used multivariable models and adjusted for treatment and country. They describe models for discharge and death, not comparisons between periods, and specify P < .05 rather than P < .20 for selecting factors and assessing significance. (LLM, conf=0.90)

      Experimental — accuracy not yet measured
    • cites [7] Mishima Y, Nawa N, Asada M, Nagashima M, Aiso Y, Nukui Y, Fujiwara T, Shigemitsu H (2023) Impact of antibiotic Time-Outs in multidisciplinary ICU rounds for antimicrobial stewardship program on patient survival: A controlled Before-and-After study. Crit Care Explor 5(1):e0837. https://doi.org/10.1097/CCE.0000000000000837 source

      The Statistical Analyses section says the authors compared phases with a Fine-Gray model that included patient characteristics, and Table 2 confirms multivariable adjustment. The supplied claim’s additional p<0.20 selection criterion is not supported: the listed predictors include characteristics with between-phase p values above 0.20 in Table 1. That criterion does not appear in the verbatim citing sentence. (LLM, conf=0.86)

      Experimental — accuracy not yet measured
  • Classified as probably not a substantial claim.

    Premisecitation

    Rapid ID and AST result availability contributes to faster therapy modification.

    “It is known that rapid ID and AST result availability contributes to faster therapy modification [16–18].”
    Quote in the paperSubstantial claim3 of 3 sources checked
    • cites [16] Banerjee R, Komarow L, Virk A, Rajapakse N, Schuetz AN, Dylla B, Earley M, Lok J, Kohner P, Ihde S, Cole N, Hines L, Reed K, Garner OB, Chandrasekaran S, de St Maurice A, Kanatani M, Curello J, Arias R, Swearingen W, Doernberg SB, Patel R (2021) Randomized trial evaluating clinical impact of rapid identification and susceptibility testing for Gram-negative bacteremia: RAPIDS-GN. Clin Infect Dis 73(1):e39–e46. https://doi.org/10.1093/cid/ciaa528 source
    • cites [17] Banerjee R, Teng CB, Cunningham SA, Ihde SM, Steckelberg JM, Moriarty JP, Shah ND, Mandrekar JN, Patel R (2015) Randomized trial of rapid multiplex polymerase chain Reaction-Based blood culture identification and susceptibility testing. Clin Infect Dis 61(7):1071–1080. https://doi.org/10.1093/cid/civ447 source
    • cites [18] Lopez-Pintor JM, Sanchez-Lopez J, Navarro-San Francisco C, Sanchez-Diaz AM, Loza E, Canton R (2021) Real life clinical impact of antimicrobial stewardship actions on the blood culture workflow from a microbiology laboratory. Antibiot (Basel) 10(12). https://doi.org/10.3390/antibiotics10121511 source
  • Classified as probably not a substantial claim. May combine two claims.

    Premisecitation

    A rapid introduction of an adequate antimicrobial treatment is essential for optimal care, reducing mortality and length of hospital stay, and to fight antibiotic resistance.

    “A rapid introduction of an adequate antimicrobial treatment is essential for optimal care, reducing mortality and length of hospital stay, and to fight antibiotic resistance [1].”
    Quote in the paperSubstantial claim1 of 1 sources checked
    • cites [1] Maurer FP, Christner M, Hentschke M, Rohde H (2017) Advances in rapid identification and susceptibility testing of Bacteria in the clinical microbiology laboratory: implications for patient care and antimicrobial stewardship programs. Infect Dis Rep 9(1):6839. https://doi.org/10.4081/idr.2017.6839 source
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    Use of inadequate and unnecessarily broad empiric antibiotics is linked to higher mortality.

    “Literature highlights that the use of inadequate and unnecessarily broad empiric antibiotics is linked to higher mortality [21, 22].”
    Quote in the paperNot a substantial claim2 of 2 sources checked
    • cites [21] Hung YP, Lee CC, Ko WC (2022) Effects of inappropriate administration of empirical antibiotics on mortality in adults with bacteraemia: systematic review and Meta-Analysis. Front Med (Lausanne) 9:869822. https://doi.org/10.3389/fmed.2022.869822 source

      The Results report that inappropriate empirical antibiotic therapy was associated with higher mortality in adults with bacteraemia. The Methods define appropriateness by whether the antimicrobial was active against the causative organism; the paper does not establish that unnecessarily broad therapy is linked to higher mortality. Page numbers are unavailable in our copy. (LLM, conf=0.89)

      Experimental — accuracy not yet measured
    • cites [22] Rhee C, Kadri SS, Dekker JP, Danner RL, Chen HC, Fram D, Zhang F, Wang R, Klompas M, Program CDCPE (2020) Prevalence of antibiotic-Resistant pathogens in Culture-Proven Sepsis and outcomes associated with inadequate and Broad-Spectrum empiric antibiotic use. JAMA Netw Open 3(4):e202899. https://doi.org/10.1001/jamanetworkopen.2020.2899 source
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    In the Morquin et al. study, result delivery accounted for almost 40% of the time.

    “while result delivery accounted for almost 40% of the time”
    Quote in the paperNot a substantial claim1 of 1 sources checked
    • cites [19] Morquin D, Lejeune J, Agostini C, Godreuil S, Reynes J, Le Moing V, Lamy B (2024) Time is of the essence: achieving prompt and effective antimicrobial therapy of bloodstream infection with advanced hospital information systems. Clin Infect Dis 78(6):1434–1442. https://doi.org/10.1093/cid/ciad744 source

      In “Time in the Overall Process” (p. 1437), the paper says the time after result production and delivery accounted for close to 40% of the overall time. It does not say result delivery itself took that share; the section describes a substantial delay between viewing results and changing treatment. (LLM, conf=0.88)

      Experimental — accuracy not yet measured
  • May combine two claims.

    Premisecitation

    Improvements in TAT and faster treatment adaptation have been attributed to better outcomes in patients with BSI, including improved survival rates in some studies.

    “While the exact cause of this finding cannot be determined due to the observational nature of the study, improvements in TAT and faster treatment adaptation have been attributed to better outcomes in patients with BSI, including improved survival rates in some studies [23–25].”
    Quote in the paperNot a substantial claim3 of 3 sources checked
    • cites [23] Babowicz F, LaPlante R, Mitchell C, O’Donnell JN, Tobin E, George M, Carreno JJ (2021) Impact of accelerate pheno and bact/alert virtuo on clinical processes and outcomes in patients with Sepsis and concurrent Gram-Negative bacteremia. Antimicrob Agents Chemother 65(6). https://doi.org/10.1128/AAC.02364-20 source
    • cites [24] MacVane SH, Dwivedi HP (2024) Evaluating the impact of rapid antimicrobial susceptibility testing for bloodstream infections: a review of actionability, antibiotic use and patient outcome metrics. J Antimicrob Chemother 79(Supplement1):i13–i25. https://doi.org/10.1093/jac/dkae282 source
    • cites [25] Moon RC, MacVane SH, David J, Morton JB, Rosenthal N, Claeys KC (2024) Clinical outcomes of early Phenotype-Desirable antimicrobial therapy for enterobacterales bacteremia. JAMA Netw Open 7(12):e2451633. https://doi.org/10.1001/jamanetworkopen.2024.51633 source

      The Introduction (page unavailable) links delayed identification and susceptibility results to delayed treatment optimization and poorer bloodstream-infection outcomes, including increased mortality risk with discordant therapy. The Discussion (page unavailable) reports better overall outcomes with earlier targeted treatment, but explicitly says this study found no mortality difference. It therefore supports the general link, not a survival benefit from improved turnaround time in this study. (LLM, conf=0.86)

      Experimental — accuracy not yet measured
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    In the Morquin et al. study, the median time to appropriate treatment administration was ~53.5 h (IQR, 28.9; 98.0).

    “The Morquin, et al.. study showed that the median time to appropriate treatment administration was with ~ 53.5 h (IQR, 28.9; 98.0)”
    Quote in the paperNot a substantial claim1 of 1 sources checked
    • cites [19] Morquin D, Lejeune J, Agostini C, Godreuil S, Reynes J, Le Moing V, Lamy B (2024) Time is of the essence: achieving prompt and effective antimicrobial therapy of bloodstream infection with advanced hospital information systems. Clin Infect Dis 78(6):1434–1442. https://doi.org/10.1093/cid/ciad744 source
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    In the Morquin et al. study, only 50% of that time was dedicated to the actual testing.

    “and that only 50% of that time was dedicated to the actual testing”
    Quote in the paperNot a substantial claim1 of 1 sources checked
    • cites [19] Morquin D, Lejeune J, Agostini C, Godreuil S, Reynes J, Le Moing V, Lamy B (2024) Time is of the essence: achieving prompt and effective antimicrobial therapy of bloodstream infection with advanced hospital information systems. Clin Infect Dis 78(6):1434–1442. https://doi.org/10.1093/cid/ciad744 source
  • May combine two claims.

    Premisecitation

    The implementation of total laboratory automation increases efficiency (reducing turnaround times and increasing productivity) and improves testing quality, sample management, traceability, and operator's safety.

    “The implementation of total laboratory automation increases efficiency (reducing turnaround times (TAT) and increasing productivity) and improves the testing quality, sample management, traceability, and operator’s safety [2].”
    Quote in the paperSubstantial claim1 of 1 sources checked
    • cites [2] Trigueiro G, Oliveira C, Rodrigues A, Seabra S, Pinto R, Bala Y, Gutierrez Granado M, Vallejo S, Gonzalez V, Cardoso C (2024) Conversion of a classical microbiology laboratory to a total automation laboratory enhanced by the application of lean principles. Microbiol Spectr 12(2):e0215323. https://doi.org/10.1128/spectrum.02153-23 source

      The Introduction states that total laboratory automation increases efficiency, improves testing quality, and lowers biological risk to operators. The Abstract and Discussion also report improvements in turnaround time and productivity. However, the Introduction says automation offers a *possibility* of better sample management and traceability; the claim presents those improvements as certain. (LLM, conf=0.88)

      Experimental — accuracy not yet measured
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    Progress in BSI management is based on a bundle approach, including optimisation of pre-analytical parameters, use of rapid methods, laboratory organisation, and involvement of antimicrobial stewardship teams.

    “As highlighted by Lamy, et al.., progress in BSI management is based on a bundle approach, including the optimisation of the pre-analytical parameters, the use of rapid methods, laboratory organisation (e.g., 24/7, transportation service) and the involvement of antimicrobial stewardship teams [20].”
    Quote in the paperNot a substantial claim1 of 1 sources checked
    • cites [20] Lamy B, Sundqvist M, Idelevich EA (2020) Bloodstream infections - Standard and progress in pathogen diagnostics. Clin Microbiol Infect 26(2):142–150. https://doi.org/10.1016/j.cmi.2019.11.017 source
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    Fast de-escalation was shown to be associated with a decreased risk.

    “and a fast de-escalation was shown to be associated with a decreased risk [26, 27].”
    Quote in the paperNot a substantial claim2 of 2 sources checked
    • cites [26] Bell BG, Schellevis F, Stobberingh E, Goossens H, Pringle M (2014) A systematic review and meta-analysis of the effects of antibiotic consumption on antibiotic resistance. BMC Infect Dis 14:13. https://doi.org/10.1186/1471-2334-14-13 source

      The Discussion (page unavailable) reports that decreased antibiotic consumption was associated with decreased bacterial resistance. It does not establish that fast de-escalation specifically was associated with decreased risk; a search for de-escalation found no such finding in our copy. (LLM, conf=0.84)

      Experimental — accuracy not yet measured
    • cites [27] Teshome BF, Park T, Arackal J, Hampton N, Kollef MH, Micek ST (2024) Preventing new Gram-negative resistance through Beta-lactam De-escalation in hospitalized patients with sepsis: A retrospective cohort study. Clin Infect Dis 79(4):826–833. https://doi.org/10.1093/cid/ciae253 source

      The Outcomes section reports that beta-lactam de-escalation was associated with less new gram-negative resistance than no change (HR 0.59, 95% CI 0.48–0.73). But the Discussion says patients were classified using their entire beta-lactam exposure, not just the early treatment phase; the paper therefore does not establish the added claim about *fast* de-escalation. (LLM, conf=0.88)

      Experimental — accuracy not yet measured
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    Antibiotic resistance is correlated with antibiotic use.

    “Antibiotic resistance being correlated with antibiotic use, in terms of antimicrobial stewardship, it is crucial that antibiotics are only used when indicated”
    Quote in the paperNot a substantial claim2 of 2 sources checked
    • cites [26] Bell BG, Schellevis F, Stobberingh E, Goossens H, Pringle M (2014) A systematic review and meta-analysis of the effects of antibiotic consumption on antibiotic resistance. BMC Infect Dis 14:13. https://doi.org/10.1186/1471-2334-14-13 source
    • cites [27] Teshome BF, Park T, Arackal J, Hampton N, Kollef MH, Micek ST (2024) Preventing new Gram-negative resistance through Beta-lactam De-escalation in hospitalized patients with sepsis: A retrospective cohort study. Clin Infect Dis 79(4):826–833. https://doi.org/10.1093/cid/ciae253 source
  • May combine two claims.

    Findingown data

    TAT was improved for clinically significant monomicrobial episodes and for PBCs processed during the night shift.

    “Indeed, TAT was improved for clinically significant monomicrobial episodes and for PBCs processed during the night shift.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    No difference was observed for time to positivity and Gram stain between periods.

    “No difference was observed for time to positivity and Gram stain, whereas times to ID (-2.2 h median difference; p = 0.004) and TAT (-2.7 h; p = 0.009) were significantly shorter for PBCs flagged positive during the night shift.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    In 2019, 73,400 plates (45% of total plates) were inoculated by one WASP instrument; in 2021, 215,000 plates (86% of total plates) were inoculated by two WASP instruments.

    “In 2019, 73,400 plates, corresponding to 45% of total plates processed, were inoculated by one WASP® instrument. In 2021, 215,000 plates were inoculated by two WASP® instruments, corresponding to 86% of the total plates.”
    Quote in the paperSubstantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Findingown data

    The proportion of time for training remained similar (16% vs 15%).

    “The proportion of time for training remained similar (16% versus 15%).”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    Microbiologists and clinicians considered 86 (83.5%) and 85 (73.9%) of the 103 and 115 monomicrobial ID episodes clinically significant pre- and post-conversion, respectively.

    “Microbiologists and clinicians considered 86 (83.5%) and 85 (73.9%) of the 103 and 115 monomicrobial ID episodes clinically significant pre- and post-conversion, respectively (Supplementary Data 3).”
    Quote in the paperNot a substantial claim
    • Rests on an assumption: The clinical significance classification by clinicians and microbiologists is valid for defining the clinically significant episode subpopulation.
  • May combine two claims.

    Findingown data

    Post-conversion instantaneous observations showed reductions in administrative (19% vs 31%), movements (9% vs 13%), transports, and walking (16% vs 20%).

    “whilst administrative (19% versus 31%), movements (9% versus 13%), transports, and walking (16% versus 20%) were reduced.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    The study included 244 BSI episodes, 116 pre-conversion and 128 post-conversion, in 104 and 112 patients, respectively.

    “The study included a total of 244 BSI episodes, of which 116 occurred pre-conversion and 128 post-conversion, in 104 and 112 patients, respectively.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Post-conversion showed better separation of areas dedicated to Day 0 and Day 1, while total laboratory surface remained constant.

    “The post-conversion period showed a better separation of areas dedicated to Day 0 and Day 1, whilst the laboratory’s total surface remained constant.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    In a French survey, laboratories without WASPLab did not meet activity split targets (27% technical, 21% administrative, 18% movement, 7% transport, 11% displacement, and 16% others), whereas laboratories operating WASPLab did (46% technical, 12% administrative, 13% movement, 9% transport, 9% displacement, and 11% others).

    “A French survey monitored 15 laboratories without WASPLab® and four equipped with WASPLab®. Laboratories without WASPLab® did not meet the activity split targets (27% technical, 21% administrative, 18% movement, 7% transport, 11% displacement, and 16% others), whereas the ones operating WASPLab® did (46% technical, 12% administrative, 13% movement, 9% transport, 9% displacement, and 11% others) (i”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Organisational improvements led to an increase in lean indicators by 14 points on Day 0 and by 20 points on Day 1.

    “Organisational improvements led to an increase in lean indicators by 14 points on Day 0 and by 20 points on Day 1 (Supplementary data 5).”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Treatment modification occurred in 76 (65.5%) pre-conversion and 81 (63.3%) post-conversion episodes.

    “Treatment modification occurred in 76 (65.5%) and 81 (63.3%) of episodes”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    The percent of PBCs with AST results available within 24 h decreased for daytime PBCs, without reaching statistical significance (48.8% vs 35.0%, p=0.20).

    “and decreased for daytime PBCs, without reaching statistical significance (48.8% versus 35.0%, p = 0.20) (Fig. 1B).”
    Quote in the paperNot a substantial claim
  • Classified as probably not a substantial claim.

    Study design and conductreasoning

    The two compared periods lasted a full year to be comparable.

    “The two compared periods lasted a full year to be comparable.”
    Quote in the paperSubstantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Study design and conductown data

    The analysis plan did not allow assessment of whether time savings led to communication of microbiological results at an hour of the day with optimal probability of being actioned promptly.

    “It should be noted that our analysis plan did not allow us to assess whether time savings led to a communication of microbiological results at an hour of the day with optimal probability of being actioned promptly.”
    Quote in the paperNot a substantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Study design and conductnone given

    Clinical information was collected from the hospital's Electronic Patients Record system and reviewed by the same infectious disease specialist and an intensive care physician.

    “Clinical information was collected from the hospital’s Electronic Patients Record system and reviewed by the same infectious disease specialist and an intensive care physician.”
    Quote in the paperNot a substantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.

    Premisecitation

    Around the clock BSI diagnostics is known to shorten TAT and, in turn, to reduce delays in appropriate treatment introduction.

    “Around the clock BSI diagnostics is known to shorten TAT and, in turn, to reduce delays in appropriate treatment introduction [10].”
    Quote in the paperNot a substantial claim0 of 1 sources checked
    • cites [10] Chirio D, Demonchy E, Le Marechal M, Gaudart A, Lotte R, Carles M, Ruimy R (2023) 24/7 workflow for bloodstream infection diagnostics in microbiology laboratories: the first step to improve clinical management. Clin Chem Lab Med 61(2):349–355. https://doi.org/10.1515/cclm-2022-0667 source
  • Classified as probably not a substantial claim.

    Study design and conductreasoning

    The year 2020 was excluded due to the potential impact of the initial COVID-19 waves on the laboratory workflow.

    “The year 2020 was excluded due to the potential impact of the initial COVID-19 waves on the laboratory workflow.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Interpretationown data

    Following the laboratory automation and reorganisation, the Centre Hospitalier de Valenciennes achieved lean targets, making a proportion of time available for high added-value activities.

    “Following the laboratory automation and reorganisation, the Centre Hospitalier de Valenciennes achieved lean targets, making a proportion of time available for high added-value activities.”
    Quote in the paperSubstantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    According to the results of the French Society of Microbiology national survey, the Centre Hospitalier de Valenciennes belongs to well-organised laboratories for BSI management.

    “According to the results, the Centre Hospitalier de Valenciennes belongs to well-organised laboratories for BSI management [15].”
    Quote in the paperNot a substantial claim0 of 1 sources checked
    • cites [15] Cattoen C, Lamy B (2022) Restitution de l’observatoire National des bactériémies. Microbes 2022 17e congres. National de la SFM, Montpellier

      Couldn’t be matched to a paper in Crossref, so it can’t be checked.

  • Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.

    Premisecitation

    The impact of automation is greater when laboratories are running 24/7 and is particularly important for sepsis management.

    “Studies show that the impact of automation is greater when laboratories are running 24/7 and is particularly important for sepsis management [3].”
    Quote in the paperNot a substantial claim0 of 1 sources checked
    • cites [3] Bou G, Calbo E, Crespo M, Canton R, Alvarez de Luna FF, Garcia Rodriguez J, Angel Goenaga M, Gonzalez-Garcia J, Gonzalez J, Larrosa N, Martinez-Martinez L, Navarro D, Ramon Pano J, Rivero A, Carlos Rodriguez J, Tomas M, Vilaj J (2022) Justification for 24/7 clinical microbiology services. Enferm Infecc Microbiol Clin (Engl Ed) 40(1):1–4. https://doi.org/10.1016/j.eimce.2021.08.014 source
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Study design and conductnone given

    Missing data on covariates were not replaced.

    “Missing data on covariates were not replaced.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Interpretationown data

    Laboratory reorganisation improved laboratory efficiency, leading to improvements in the management of patients with BSIs.

    “Laboratory reorganisation improved laboratory efficiency, leading to improvements in the management of patients with BSIs.”
    Quote in the paperSubstantial claim
    • Rests on an assumption: The pre-conversion and post-conversion periods are comparable except for the laboratory reorganisation, with no other secular changes or unmeasured confounders affecting the outcomes.
  • Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.

    Study design and conductnone given

    Laboratory variables and antimicrobial consumption data were collected from the Laboratory Information System and reviewed by two microbiologists.

    “Laboratory variables and antimicrobial consumption data were collected from the Laboratory Information System and reviewed by two microbiologists from Laboratory Information System.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Interpretationown data

    Laboratory conversion and reorganisation at the Centre Hospitalier de Valenciennes allowed for the processing of increased sample numbers and led to an improvement in the efficiency and timeliness of diagnostic results in the laboratory.

    “Laboratory conversion and reorganisation at the Centre Hospitalier de Valenciennes allowed for the processing of increased sample numbers and led to an improvement in the efficiency and timeliness of diagnostic results in the laboratory.”
    Quote in the paperSubstantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.

    Study design and conductnone given

    Data collection for the two periods was performed by the same two healthcare professionals during the same period of time.

    “Data collection for the two periods was performed by the same two healthcare professionals during the same period of time.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Study design and conductown data

    There were no significant differences between pre- and post-conversion groups regarding demographics, comorbidities, reasons for hospital admission, site of infection, pathogen ID, or mechanisms of resistance.

    “There were no significant differences between the two groups regarding demographics, comorbidities, reasons for hospital admission, site of infection, pathogen ID, or mechanisms of resistance (Supplementary Data 3).”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Interpretationown data

    Laboratory conversion to full automation, together with lean reorganisation, improved BSI management and resulted in improvement of TAT, especially for night shift samples, impacting the time to first antimicrobial treatment modification.

    “In conclusion, laboratory conversion to full automation, together with lean reorganisation, improved the BSI management and resulted in the improvement of TAT, especially for night shift samples impacting the time to first antimicrobial treatment modification.”
    Quote in the paperSubstantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.

    Study design and conductcitation

    The disruption of the post-conversion period by the COVID-19 pandemic could have introduced a bias related to populations studied, albeit SAPS were similar in both periods.

    “post-conversion period by the COVID-19 pandemic could have introduced a bias related to populations studied, albeit simplified acute physiology scores (SAPS) [28] were similar in both periods.”
    Quote in the paperNot a substantial claim0 of 1 sources checked
    • cites [28] Le Gall JR, Lemeshow S, Saulnier F (1993) A new simplified acute physiology score (SAPS II) based on a european/north American multicenter study. JAMA 270(24):2957–2963. https://doi.org/10.1001/jama.270.24.2957 source
  • Classified as probably not a substantial claim.

    Study design and conductnone given

    The authors applied a robust statistical adjustment to account for potential differences in patients' characteristics during the two periods.

    “We also applied a robust statistical adjustment to account for potential differences in patients’ characteristics during the two periods.”
    Quote in the paperSubstantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing), S4 (based). May combine two claims.

    Study design and conductnone given

    Although the two study periods occurred only 3 years apart, actual practice and drug use in antimicrobial therapy may have evolved, making the comparison difficult.

    “Although the two study periods occurred only 3 years apart, the actual practice and drug use in antimicrobial therapy may have evolved, making the comparison difficult.”
    Quote in the paperNot a substantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing), S4 (based).

    Study design and conductnone given

    The distribution of isolated microorganisms reflected that normally seen in hospital practice and the ICU setting, where diagnostic results and antibiotic changes are likely to have the biggest impact on mortality and length of stay.

    “Also, the distribution of the isolated microorganisms reflected that normally seen in a hospital practice and the ICU setting, where diagnostic results and antibiotic changes are likely to have the biggest impact on mortality and length of stay.”
    Quote in the paperNot a substantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing), S4 (based). May combine two claims.

    Study design and conductreasoning

    The increased contamination rate in the post-intervention period could have contributed to the decrease in the percentage of blood samples flagged positive during the day shift with AST within 24 h, possibly linked to a delayed decision to run AST when contamination was suspected.

    “The increased contamination rate in the post-intervention period could have contributed to the decrease in the percentage of blood samples flagged positive during the day shift, with AST within 24 h as maybe linked to a delayed decision to run AST, when there was a suspicion of contamination.”
    Quote in the paperNot a substantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Study design and conductreasoning

    Changes observed may have been influenced by other factors unrelated to the intervention (e.g., higher contamination rate in the post-intervention period).

    “Changes observed may have been influenced by other factors unrelated to the intervention (e.g., higher contamination rate in the.”
    Quote in the paperNot a substantial claim
  • Classified as probably not a substantial claim.

    Study design and conductreasoning

    To mitigate design limitations, the authors defined two 1-year observation periods to ensure the clinical relevance of the observed difference while limiting potential seasonal variability.

    “However, to mitigate the design’s inherent limitations, we defined two 1-year observation periods to ensure the clinical relevance of the observed difference, while limiting potential seasonal variability.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Interpretationown data

    These findings showed, for the first time, how laboratory efficiency by automation and 24/7 conversion could improve BSI management and antibiotics consumption, having an impact at the patient level and global level, with antimicrobial resistance emergence prevention.

    “These findings showed, for the first time, how laboratory efficiency by automation and 24/7 conversion could improve BSI management and antibiotics consumption having an impact at the patient level and global level, with antimicrobial resistance emergence prevention.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Study design and conductnone given

    Although a limited number of patients with BSI episodes were included, patient distribution was balanced with respect to demographic variables and underlying pathologies.

    “Regarding the strengths, although a limited number of patients with BSI episodes were included, patient distribution was balanced with respect to demographic variables and underlying pathologies.”
    Quote in the paperNot a substantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.

    Study design and conductnone given

    Other limitations comprised the lack of information on appropriate or effective antibiotic therapy, confounding variables, and the lack of data on other infection-management methods, such as surgical source control.

    “Second, other limitations comprised the lack of information on appropriate or effective antibiotic therapy, confounding variables, and the lack of data on other infection-management methods, such as surgical source control.”
    Quote in the paperNot a substantial claim
49 of 49
  • The paper relies on this without support.

    The pre-conversion and post-conversion periods are comparable except for the laboratory reorganisation, with no other secular changes or unmeasured confounders affecting the outcomes.

    “January to December 2019 was selected as the baseline “pre-conversion” period. The year 2020 was excluded due to the potential impact of the initial COVID-19 waves on the laboratory workflow. June 2021 to May 2022 corresponded to the “post-conversion” period.”
  • The paper relies on this without support.

    The clinical significance classification by clinicians and microbiologists is valid for defining the clinically significant episode subpopulation.

    “Clinical relevance of the results was established based on clinician/microbiologist review.”
  • The paper relies on this without support.

    The lean indicators and activity observations are valid measures of laboratory efficiency.

    “A lab consultancy expert assessed the laboratory’s efficiency before and after the lab automation and reorganisation, according to the following lean indicators.”
  • The paper relies on this without support.

    There was a need to change the organisational model to absorb an anticipated workload increase.

    “There was a need to change the organisational model to absorb the anticipated workload increase.”
4 of 4

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

Each contradiction between two passages listed here was confirmed by an independent check.

  • Pre-conversion laboratory described as having no automation

    Minor

    The discussion describes the pre-conversion laboratory as operating without automation, but the results state that a WASP® instrument inoculated 45% of its plates in 2019.

1 of 1

Cites

Flagged first, then by citations

Research works printed but not linked: 1

  1. Cattoen C, Lamy B (2022) Restitution de l’observatoire National des bactériémies. Microbes 2022 17e congres. National de la SFM, Montpellier

Cited by

Sorted by citations

Authors
Paluch, M., Ettahar, N., Lagraulet, B., Cattoen, C., Rethore, E., Dubrulle, A., Abad, L., Canis, F., Wayenberg, L., Lambiotte, F., & Dewulf, G.
Affiliations
  • Centre Hospitalier de Valenciennes (FR)
  • bioMérieux (France) (FR)
Corresponding author
Dewulf, Gisèle
Venue
European Journal of Clinical Microbiology & Infectious Diseases
Published
2025-07-11
Volume
44
Issue
10
Pages
2465-2474
ISSN
  • 0934-9723 (ISSN-L)
  • 1435-4373
OpenAlex
W4412193480
Cited by
5
References
25
Citations by year
2026: 5
FWCI
2.63
Type
journal article
Language
en
Open access
Locations
  • European Journal of Clinical Microbiology & Infectious Diseases (publishedVersion, cc-by-nc-nd)
  • PubMed (publishedVersion)
  • Europe PMC (PubMed Central) (submittedVersion, cc-by-nc-nd)
  • PubMed Central (submittedVersion, cc-by-nc-nd)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Clinical Biochemistry › Bacterial Identification and Susceptibility Testing
  • Health Sciences › Medicine › Physiology › Clinical Laboratory Practices and Quality Control
  • Health Sciences › Medicine › Epidemiology › Sepsis Diagnosis and Treatment
Keywords
bloodstream infection, laboratory automation, turnaround time, blood culture, antimicrobial susceptibility testing, antibiotic stewardship, intensive care unit discharge, 30-day mortality, antibiotic use, intensive care unit
MeSH terms
Blood Culture, Aged, Anti-Bacterial Agents, Female, Humans, Intensive Care Units, Male, Middle Aged, Retrospective Studies, Time Factors, Bacteremia, Sepsis, Workflow

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Claims read by deepseek-v4.1-flash under definition version 3 (extract-v3) on 2026-10-14.

Classified by jev-1.13-20260917 (gold-guideline-v0.2) on 2026-10-14.

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Statistics and arithmetic are recomputed, not judged.

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