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Structure and evolution of the apolipoprotein multigene family

Luo, Chi-Cheng, Li, Wen-Hsiung, Moore, Marsha N., Chan, Lawrence·1986·Journal of Molecular Biology
DOI 10.1016/0022-2836(86)90436-5
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Abstract

We present the complementary DNA and deduced amino acid sequence of rat apolipoprotein A-II (apoA-II), and the results of a detailed statistical analysis of the nucleotide and amino acid sequences of all the apolipoprotein gene sequences published to date: namely, those of human and rat apoA-I, apoA-II and apoE, rat apoA-IV, and human apoC-I, C-II and C-III. Our results indicate that the apolipoprotein genes have very similar genomic structures, each having a total of three introns at the same locations. Using the exon/intron junctions as reference points, we have obtained an alignment of the coding regions of all the genes studied. It appears that the mature peptide regions of these genes are almost completely made up of tandem repeats of 11 codons. The part of mature peptide region encoded by exon 3 contains a common block of 33 codons, whereas the part encoded by exon 4 contains a much more variable number of internal repeats of 11 codons. These genes have apparently evolved from a primordial gene through multiple partial (internal) and complete gene duplications. On the basis of the degree of homology of the various sequences, and the pattern of the internal repeats in these genes, we propose an evolutionary tree for the apolipoprotein genes and give rough estimates of the divergence times between these genes. Our results show that apoA-II has evolved extremely rapidly and that apoA-I and apoE also have evolved at high rates but some regions are better conserved than the…

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Research works printed but not linked: 79

  1. Baker, 1975, J. Biol. Chem, 250, 2725, 10.1016/S0021-9258(19)41662-1 · DOI
  2. Barker, 1977, Biochem. Physiol, 57B, 309
  3. Boguski, 1984, 81, 5021
  4. Boguski, 1985, 82, 992
  5. Bokisch, 1970, J. Clin. Invest, 49, 2427, 10.1172/JCI106462 · DOI
  6. Breckenridge, 1978, New Engl. J. Med, 298, 1265, 10.1056/NEJM197806082982301 · DOI
  7. Brewer, 1978, Biochem. Biophys. Res. Commun, 80, 623, 10.1016/0006-291X(78)91614-5 · DOI
  8. Brown, 1975, Cell, 6, 307, 10.1016/0092-8674(75)90182-8 · DOI
  9. Brown, 1972, Biochem. Biophys. Res. Commun, 46, 375, 10.1016/S0006-291X(72)80149-9 · DOI
  10. Bruns, 1983, Arteriosclerosis, 4, 97, 10.1161/01.ATV.4.2.97 · DOI
  11. Chan, 1980, Biochemistry, 19, 5631, 10.1021/bi00565a027 · DOI
  12. Cheung, 1983, Nucl. Acids Res, 11, 3703, 10.1093/nar/11.11.3703 · DOI
  13. Cheung, 1984, 81, 508
  14. Das, 1985, J. Biol. Chem, 260, 6240, 10.1016/S0021-9258(18)88963-3 · DOI
  15. Dayhoff, 1972, vol. 5
  16. Edelstein, 1978, Biochemistry, 15, 1934, 10.1021/bi00654a022 · DOI
  17. Fielding, 1972, Biochem. Biophys. Res. Commun, 46, 1493, 10.1016/0006-291X(72)90776-0 · DOI
  18. Fitch, 1977, Genetics, 86, 623, 10.1093/genetics/86.3.623 · DOI
  19. George, 1984, J. Biol. Chem, 259, 2667, 10.1016/S0021-9258(17)43406-5 · DOI
  20. Gergen, 1979, Nucl. Acids Res, 7, 2115, 10.1093/nar/7.8.2115 · DOI
  21. Glomset, 1968, J. Lipid Res, 9, 155, 10.1016/S0022-2275(20)43114-1 · DOI
  22. Goldstein, 1977, Annu. Rev. Biochem, 46, 897, 10.1146/annurev.bi.46.070177.004341 · DOI · Paper page
  23. Goodman, 1981, Progr. Biophys. Mol. Biol, 38, 105, 10.1016/0079-6107(81)90012-2 · DOI
  24. Herbert, 1974, J. Biol. Chem, 249, 5718, 10.1016/S0021-9258(20)79876-5 · DOI
  25. Hillyard, 1972, Biochemistry, 11, 511, 10.1021/bi00754a005 · DOI
  26. Hood, 1975, Annu. Rev. Genet, 9, 305, 10.1146/annurev.ge.09.120175.001513 · DOI
  27. Hui, 1981, J. Biol. Chem, 256, 5646, 10.1016/S0021-9258(19)69254-9 · DOI · Paper page
  28. Innerarity, 1984, J. Biol. Chem, 259, 7261, 10.1016/S0021-9258(17)39866-6 · DOI · Paper page
  29. Jackson, 1984, 81, 2945
  30. Jackson, 1973, J. Biol. Chem, 248, 2639, 10.1016/S0021-9258(19)44054-4 · DOI
  31. Jackson, 1976, Phys. Rev, 56, 259
  32. Jeanneret, 1976, Hoppe-Seyler's Z. Physiol. Chem. Bd, 357, 867, 10.1515/bchm2.1976.357.1.867 · DOI
  33. Jeanpierre, 1984, Somat. Cell Mol. Genet, 10, 645, 10.1007/BF01535231 · DOI
  34. Jonas, 1972, J. Biol. Chem, 247, 7767, 10.1016/S0021-9258(19)44589-4 · DOI
  35. Karathanasis, 1985, 82, 6374
  36. Karathanasis, 1983, 80, 6147
  37. Kimura, 1973, Nature New Biol, 243, 199, 10.1038/newbio243199a0 · DOI
  38. Knott, 1984, Biochem. Biophys. Res. Commun, 125, 299, 10.1016/S0006-291X(84)80368-X · DOI
  39. Knott, 1984, Biochem. Biophys. Res. Commun, 120, 734, 10.1016/S0006-291X(84)80168-0 · DOI
  40. Knott, 1984, Nucl. Acids Res, 12, 3909, 10.1093/nar/12.9.3909 · DOI
  41. Lackner, 1984, Biochem. Biophys. Res. Commun, 122, 877, 10.1016/0006-291X(84)91172-0 · DOI
  42. LaRosa, 1970, Biochem. Biophys. Res. Commun, 41, 57, 10.1016/0006-291X(70)90468-7 · DOI
  43. Law, 1984, Biochem. Biophys. Res. Commun, 118, 934, 10.1016/0006-291X(84)91485-2 · DOI
  44. Li, 1983, Mol. Biol. Evol, 1, 94
  45. Li, 1985, Mol. Biol. Evol, 2, 150
  46. Lin-Lee, 1985, Biochemistry, 24, 3751, 10.1021/bi00335a050 · DOI
  47. Mahley, 1983, Biochim. Biophys. Acta, 737, 197, 10.1016/0304-4157(83)90001-1 · DOI
  48. Maxam, 1980, Methods Enzymol, 65, 499, 10.1016/S0076-6879(80)65059-9 · DOI
  49. McLachlan, 1977, Nature (London), 267, 465, 10.1038/267465a0 · DOI
  50. McLean, 1983, J. Biol. Chem, 258, 8993, 10.1016/S0021-9258(18)32155-0 · DOI
  51. McLean, 1984, J. Biol. Chem, 259, 6498, 10.1016/S0021-9258(20)82169-3 · DOI
  52. Moore, 1984, Biochem. Biophys. Res. Commun, 123, 1, 10.1016/0006-291X(84)90371-1 · DOI
  53. Perler, 1980, Cell, 20, 555, 10.1016/0092-8674(80)90641-8 · DOI
  54. Perryman, 1984, Clin. Chem, 30, 662, 10.1093/clinchem/30.5.662 · DOI
  55. Plummer, 1978, J. Biol. Chem, 253, 3907, 10.1016/S0021-9258(17)34776-2 · DOI
  56. Poncin, 1984, Eur. J. Biochem, 140, 493, 10.1111/j.1432-1033.1984.tb08129.x · DOI
  57. Pownall, 1980, 77, 3154
  58. Protter, 1984, DNA, 3, 449, 10.1089/dna.1.1984.3.449 · DOI
  59. Quarfordt, 1982, J. Biol. Chem, 257, 14642, 10.1016/S0021-9258(18)33329-5 · DOI
  60. Rall, 1982, 79, 4696
  61. Rall, 1983, J. Clin. Invest, 12, 1288, 10.1172/JCI111085 · DOI · Paper page
  62. Rybak, 1978, Pharmacology, 16, 11, 10.1159/000136740 · DOI
  63. Scanu, 1975, Paabs Revista, 4, 1
  64. Segrest, 1974, FEBS Letters, 38, 247, 10.1016/0014-5793(74)80064-5 · DOI
  65. Sharpe, 1984, Nucl. Acids Res, 12, 3917, 10.1093/nar/12.9.3917 · DOI
  66. Sherrill, 1980, J. Biol. Chem, 255, 1804, 10.1016/S0021-9258(19)85951-3 · DOI
  67. Shoulders, 1983, Nucl. Acids Res, 11, 2827, 10.1093/nar/11.9.2827 · DOI
  68. Soutar, 1975, Biochemistry, 14, 3057, 10.1021/bi00685a003 · DOI
  69. Sparrow, 1980, Ann. N.Y. Acad. Sci, 348, 187, 10.1111/j.1749-6632.1980.tb21300.x · DOI
  70. Sparrow, 1982, CRC Crit. Rev. Biochem, 13, 87, 10.3109/10409238209108710 · DOI
  71. Steinmetz, 1985, J. Biol. Chem, 260, 2258, 10.1016/S0021-9258(18)89547-3 · DOI
  72. Tsao, 1985, J. Biol. Chem, 260, 15222, 10.1016/S0021-9258(18)95725-X · DOI
  73. Wang, 1985, J. Clin. Invest, 75, 384, 10.1172/JCI111711 · DOI
  74. Wei, 1985, J. Biol. Chem, 260, 15211, 10.1016/S0021-9258(18)95724-8 · DOI
  75. Weisgraber, 1982, J. Biol. Chem, 257, 2518, 10.1016/S0021-9258(18)34954-8 · DOI · Paper page
  76. Weisgraber, 1984, J. Clin. Invest, 73, 1024, 10.1172/JCI111287 · DOI · Paper page
  77. Windler, 1980, J. Biol. Chem, 255, 5475, 10.1016/S0021-9258(19)70811-4 · DOI
  78. Yokoyama, 1980, J. Biol. Chem, 255, 7333, 10.1016/S0021-9258(20)79708-5 · DOI
  79. Zorich, 1985, J. Biol. Chem, 260, 8831, 10.1016/S0021-9258(17)39427-9 · DOI · Paper page

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Metadata

Authors
Luo, C.-C., Li, W.-H., Moore, M. N., & Chan, L.
Venue
Journal of Molecular Biology
Publisher
Elsevier BV
Published
1986-02
Volume
187
Issue
3
Pages
325-340
ISSN
0022-2836
DOI
10.1016/0022-2836(86)90436-5
Cited by
173
References
3
Language
en
Licence
Funders
National Science Foundation

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