Effects of DNA methylation on DNA-binding proteins and gene expression

Targeted mutation of the DNA methyltransferase gene results in embryonic lethality

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A genomic sequencing protocol that yields a positive display of 5-methylcytosine residues in individual DNA strands

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Purification, sequence, and cellular localization of a novel chromosomal protein that binds to Methylated DNA

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Temporal and regional changes in DNA methylation in the embryonic, extraembryonic and germ cell lineages during mouse embryo development

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The essentials of DNA methylation

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CpG islands as gene markers in the human genome

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DNA methylation and gene activity

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Developmental pattern of gene-specific DNA methylation in the mouse embryo and germ line.Preprint

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DNA methylation inhibits transcription indirectly via a methyl-CpG binding protein

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Identification of a mammalian protein that binds specifically to DNA containing methylated CpGs

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Epigenomics: Genome-Wide Study of Methylation Phenomena

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Mouse models of tight junction physiology

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Transcription factor occupancy limits DNA methylation and determines ICAM1 expression in breast cancer

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TOPK promotes immune suppression in kidney renal clear cell carcinoma and emerges as a prognostic and therapeutic target

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Epigenetic regulation in MASLD – insight for therapeutic target discovery

Britsemmer, J. H., López‐Alcántara, N., & Kirchner, H. (2026) · Epigenomics · doi:10.1080/17501911.2026.2633978 · Cited by 2

Promoter identification and analysis of key glycosphingolipid biosynthesis-globo series pathway genes in piglets

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Transgenerational Epigenetic Programming

Bautista, N. M. (2022) · Springer eBooks · doi:10.1007/978-3-031-13771-6_5 · Cited by 2

CpG hypomethylation at proximal promoter and 5’UTR along with IL6 signaling loop associates with MYD88 upregulation in epithelial ovarian cancer

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Limitations of In Vivo Reprogramming to Dopaminergic Neurons via a Tricistronic Strategy

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Phosphopeptides Designed for 5-Methylcytosine Recognition

Nomura, A., & Okamoto, A. (2011) · Biochemistry · doi:10.1021/bi102053d · Cited by 2

Cytosine Methylation of Phytophthora sojae by Methylated DNA Immunoprecipitation

Spangler, M. (2012) · OhioLink ETD Center (Ohio Library and Information Network) · Cited by 2

DNA methylation of the TAA1 gene regulates formation of the pollen wall in chemically induced male sterility in wheat (Triticum aestivum)

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Duck IL-2 promoter cloning and the effects of methylation status on mRNA levels in immune tissues

Zhang, T., Liu, H., Zhou, T., Luo, J., Wang, J., Han, C., Hu, J., Wu, Q., & Wang, Y. (2018) · Central European Journal of Immunology · doi:10.5114/ceji.2018.81350 · Cited by 2

The Role of DNA Methylation in Cancer

Shahkarami, S., Zoghi, S., & Rezaei, N. (2020) · Springer eBooks · doi:10.1007/978-3-030-30845-2_22 · Cited by 2

Regulation of Gene Expression in Plants

Gatehouse, J. A. (1997) · Elsevier eBooks · doi:10.1016/b978-012214674-9/50010-2 · Cited by 2

Direct and Base Excision Repair-Mediated Regulation of a GC-Rich cis-Element in Response to 5-Formylcytosine and 5-Carboxycytosine

Müller, N., Ponkkonen, E., Carell, T., & Khobta, A. (2021) · International Journal of Molecular Sciences · doi:10.3390/ijms222011025 · Cited by 2

Comparative Single-Molecule Kinetic Study for the Effect of Base Methylation on a Model DNA–Protein Interaction

Lim, Y., Bak, S. Y., Lee, S. H., & Kim, S. K. (2020) · The Journal of Physical Chemistry Letters · doi:10.1021/acs.jpclett.0c01929 · Cited by 2

MADS specificity : Unravelling the dual function of the MADS domain protein FRUITFULL

van Mourik, H. (2017) · doi:10.18174/421563 · Cited by 2

Two MADS-box transcription factors mediate epigenetic control of tomato fruit ripeningPreprint

Niu, Q., Xu, Y., Huang, H., Li, L., Tang, D., Wu, S., Liu, P., Liu, R., Ma, Y., Ni, J., et al. (2022) · Research Square · doi:10.21203/rs.3.rs-2003863/v1 · Cited by 2

5-Methylcytosine and Its Oxidized Derivatives

Pfeifer, G. P. (2019) · Springer eBooks · doi:10.1007/978-981-13-8958-0_3 · Cited by 1

DNA promoter methylation of CCM genes in human cerebral cavernous malformations: Importance of confirming MSP data through sequencing

Saban, D. V., Larisch, J., Nickel, A., Pierscianek, D., Dammann, P. R., Sure, U., & Zhu, Y. (2020) · European Journal of Medical Genetics · doi:10.1016/j.ejmg.2020.104090 · Cited by 1

Extracellular ssDNA from Pittosporum tobira Exerts Strong Insecticidal Activity on Coccus hesperidum: A Natural Parallel to ‘Genetic Zipper’ Technology

Oberemok, V. V., Laikova, K. V., Gal’chinsky, N. V., Ali, J., Petrishina, N., Yatskova, Y., & Chachoua, I. (2026) · International Journal of Molecular Sciences · doi:10.3390/ijms27104576 · Cited by 1

Cooperative care influences genome-wide levels of DNA methylation in nestling chestnut-crowned babblers

Liebl, A. L., Anderson, S., Russell, A. F., Wesner, J. S., & Petersen, J. L. (2026) · Philosophical Transactions of the Royal Society B Biological Sciences · doi:10.1098/rstb.2025.0014 · Cited by 1

The importance of epigenetics in embryonic development and reproductive biotechnology.

Wongtawan, T. (2012) · Cited by 1

Methylation status of insulin‐like growth factor‐binding protein‐3 promoter in prostate cancer tissues

Okugi, H., Koike, H., Sekine, Y., Matsui, H., & Suzuki, K. (2006) · Asia-Pacific Journal of Clinical Oncology · doi:10.1111/j.1743-7563.2006.00055.x · Cited by 1

UNIVERSIDADE DE SÃO PAULO - USP FACULDADE DE MEDICINA DE RIBEIRÃO PRETO - FMRP DEPARTAMENTO DE GENÉTICA IDENTIFICAÇÃO DE GENES REGULADOS PELO MECANISMO DE METILAÇÃO EM LINHAGENS TUMORAIS DE CABEÇA E PESCOÇO

Kaneto, C. M. (2007) · Cited by 1

MethylSeqLogo: DNA methylation smart sequence logos

Hsu, F., & Horton, P. (2024) · BMC Bioinformatics · doi:10.1186/s12859-024-05896-2 · Cited by 1

Molecular cloning, expression pattern, and 3D structural prediction of the cold inducible RNA-binding protein (CIRP) in Japanese flounder (Paralichthys olivaceus)

Yang, X. N., Gao, J., Ma, L., Li, Z., Wang, W., Wang, Z., Yu, H., Qi, J., Wang, X., Wang, Z., et al. (2015) · Journal of Ocean University of China · doi:10.1007/s11802-015-2622-0 · Cited by 1

Cancer Epigenomics: a review

Kumar, R., & Sharan, N. (2011) · Internet Journal of Medical Update - EJOURNAL · doi:10.4314/ijmu.v6i1.63977 · Cited by 1

The Molecular Regulation of MAP3K1 in Eyelid Development

Geh, E. N. (2011) · OhioLink ETD Center (Ohio Library and Information Network) · Cited by 1

Nuclear factor I/A coordinates the timing of oligodendrocyte differentiation/maturation via Olig1 promoter methylation

Semi, K., Sanosaka, T., Namihira, M., & Nakashima, K. (2018) · HAYATI Journal of Biosciences · doi:10.4308/hjb.25.2.70 · Cited by 1

DNA base modifications in aging

Gaubatz, J. W. (2001) · Advances in cell aging and gerontology · doi:10.1016/s1566-3124(01)04027-5 · Cited by 1

EPIGENÉTICA Y EPIGENÓMICA DE LA ARTRITIS REUMATOIDE

Gómez, L. M., Páez, M. C., & Anaya, Y. J.-M. (2006) · Redalyc (Universidad Autónoma del Estado de México) · Cited by 1

DETECTION OF GENETIC ALTERATIONS IN MOUSE LUNG ADENOCARCINOMAS BY TWO-DIMENSIONAL GEL ELECTROPHORESIS

Liu, J., Gu, P., Bergman, G., Kelloff, G. J., Boone, C. W., You, M., & Wang, Y. (2000) · Experimental Lung Research · doi:10.1080/01902140150216738 · Cited by 1

Elimination of Colon Cancer Stem-Like Cells by the Combination of Curcumin

Yu, Y., Kanwar, S. S., Patel, B. B., Nautiyal, J., Sarkar, F. H., & Majumdar, A. P. N. (2009) · Cited by 1

Targeting the Epigenome with Dietary Agents

Delage, B., & Dashwood, R. H. (2008) · Oxidative stress and disease · doi:10.1201/9780849381492.ch13 · Cited by 1

Transposon regulation upon dynamic loss of DNA methylation

Walter, M. (2015) · HAL · doi:10.13140/rg.2.2.18747.21286 · Cited by 1

Conservation Genetics and Epigenetics of Pronghorn, Antilocapra americana

Hahn, E. E. (2016) · UA Campus Repository (The University of Arizona) · Cited by 1

DNA methylation epigenetically regulates gene expression in Burkholderia cenocepaciaPreprint

Vandenbussche, I., Sass, A. M., Pinto‐Carbó, M., Mannweiler, O., Eberl, L., & Coenye, T. (2020) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2020.02.21.960518 · Cited by 1

ISL2 is an epigenetically silenced tumor suppressor and regulator of metabolism in pancreatic cancerPreprint

Tufan, T., Yang, J., Tummala, K. S., Cingoz, H., Kuscu, C., Adair, S. J., Cömertpay, G., Nagdas, S., Goudreau, B. J., Luleyap, H. U., et al. (2020) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2020.05.23.112839 · Cited by 1

The Arabidopsis active demethylase ROS1 cis -regulates immune-responsive genes by pruning DNA methylation at promoter-regulatory regionsPreprint

Halter, T., Wang, J., Amesefe, D., Lastrucci, E., Charvin, M., Singla‐Rastogi, M., & Navarro, L. (2020) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2020.09.30.321257 · Cited by 1

DNA methylation at a single cytosine embedded in the W-box cis -element repels binding of WRKY transcription factors through steric hindrancePreprint

Charvin, M., Halter, T., Blanc‐Mathieu, R., Barraud, P., Nicaise, M., Parcy, F., & Navarro, L. (2022) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2022.09.26.509487 · Cited by 1

Epigenic regulation and posttranslational modification of human cytochrome P450s : Focus on CYP2W1, CYP1A2 and CYP2C18

Gomez, A. V. (2008) · Figshare · Cited by 1

Epigenomics and Cancer

de Silanes, I. L., & Esteller, M. (2008) · Humana Press eBooks · doi:10.1007/978-1-59745-470-4_14

Das Cd-induzierbare crp-Gen aus dem terrestrischen Oligochaeten Enchytraeus: Genomische Organisation und Bedeutung für die Cd-Detoxifizierung

Tschuschke, S. (2001)

Analysis of the Regulation of Expression of Transforming Growth Factor-Beta in Human Breast Cancer Cells.

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Identificação de Genes Regulados pelo Mecanismo de Metilação em Linhagens Tumorais de Cabeça e Pescoço

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DNA Structures of Biological Relevance, Studies of Unusual Sequences

Wang, Y.-H. (2006) · Encyclopedia of Analytical Chemistry · doi:10.1002/9780470027318.a1409

Genetic etiology of hereditary colorectal cancer: new mechanisms and advanced mutation detection techniques

Gazzoli, I. (2006) · Utrecht University Repository (Utrecht University)

Investigating the molecular basis of adaptation and speciation in divergent populations

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THE ROLE OF CATECHOL-O-METHYLTRANSFERASE (COMT) AND THE EFFECTS OF COMT INHIBITION IN BRAIN AND IN CARDIOVASCULAR AND RENAL PATHOPHYSIOLOGY

Helkamaa, T. (2007) · Työväentutkimus Vuosikirja

Roles of EEF1A2 & PTK6 in breast cancer

Fida, M. (2011) · ERA

Effects of DNA methylation pattern on the chromatin structure

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Somatische Mosaike und atypische Deletionen bei Patienten mit Prader-Willi- und Angelman-Syndrom

Nazlican, H. (2006) · DuEPublico (University of Duisburg-Essen)

Expresión de adiponectina y sus receptores en tejido adiposo. Regulación epigenética en la adipogénesis.

Musri, M. M. (2006) · LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Científicas)

Effects of caffeic acid, chlorogenic acid, and EGCG on the methylation status of p16 gene in T-47D breast cancer cells

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The Characterization of CpG Methylation ofERα andERβ Gene in the Breast Cancer

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Early replicating DNA involved in the G2 to M transition in Allium cepa L meristematic cells

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Methylated-CpG island recovery assay-assisted microarrays for cancer diagnosis

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Identification, structural characterization, and tissue distribution of Tsg-5: a new TNF-stimulated gene

Abrantes, E. F., Pires, E., Carvalho, A. F., Costa, F. F., Savino, W., & Reis, L. F. L. (2003) · Genes and Immunity · doi:10.1038/sj.gene.6363949

The Th1 Adjuvant Effect of Immunostimulatory (ISS) DNA Sequences

Corr, M., & Tang, C. M. (2002) · Humana Press eBooks · doi:10.1007/978-1-59259-305-7_12

Maternal uniparental disomy of human chromosome 7

Hannula‐Jouppi, K. (2001) · Työväentutkimus Vuosikirja

Regulation of the catalytic activity and specificity of DNA nucleotide methyltransferase 1

Bashtrykov, P. (2014) · OPUS Publication Server of the University of Stuttgart (University of Stuttgart) · doi:10.18419/opus-1407

Targeted transposition of the Sleeping Beauty transposon using zinc finger proteins

Voigt, K. (2011) · Universitätsbibliothek der FU Berlin Hochschulschriftenstelle u. Dokumentenserver · doi:10.17169/refubium-11455

Molecular Signatures of Cancer

Edlundh-Rose, E. (2006) · KTH Publication Database DiVA (KTH Royal Institute of Technology)

Herstellung und Charakterisierung von APOBEC-1 transgenen Kaninchen mit dem leberspezifischen APOBEC-1 Promotor der Ratte

Apostel, F. (2001)

The Functional Significance and Chromatin Organisation of the Imprinting Control Regions of the H19 and Kcnq1 Genes

Kanduri, M. (2004) · KTH Publication Database DiVA (KTH Royal Institute of Technology)

Healing Cartilage -Aspects on Regenerative Methods

Enochson, L. (2013) · Gothenburg University Publications Electronic Archive (Gothenburg University)

DNA methylation modulates transcription factor occupancy chiefly at sites of high intrinsic cell-type variabilityPreprint

Maurano, M. T., Wang, H., John, S., Shafer, A., Canfield, T. K., Lee, K., & Stamatoyannopoulos, J. A. (2014) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/003061

Characterisation and Functional Studies of the DNA Cytosine-5-Methyltransferase 3-like Gene

Aapola, U. (2004) · Tampere University Institutional Repository (Tampere University)

Systems Epigenomics and Applications to Ageing and Cancer

Teschendorff, A. E. (2015) · Translational bioinformatics · doi:10.1007/978-94-017-9927-0_8

Mismatch repair genes in Lynch syndrome: a review Genes de reparo de DNA na síndrome de Lynch: uma revisão

Cavalcanti, F. L. D. S., da Silva, C., Dominguez–Valentin, M., Ferreira, F. D. O., Carraro, D. M., & Mauro, B. (2009)

Molecular Biotechnology Programme

Johnsson, P. (2012)

Review Article: Deoxyribonucleic acid (DNA) methylation and its impact in generation of cancer

Rajeswari, J. J., & Chakravarthi, G. P. (2014)

EPIGENETIC SILENCING OF THE PROAPOPTOTIC GENE BIM IN ANAPLASTIC

Mogavero, A. (2010)

Struktur und Funktion des Gens für das translationell kontrollierte Tumorprotein (TCTP)

Thiele, H. (2000) · doi:10.18452/14496

STUDYING ABERRANT METHYLATION AND miRNA PROFILING FOR THE DETECTION OF LUNG CANCER BIOMARKERS

Zamakhshari, H. (2013) · Brock University Digital Repository (Brock University)

Molekulare Analyse der epigenetischen Regulation der SMN2-Genaktivität in der Pathogenese der spinalen Muskelatrophie (SMA)

Hauke, J. (2009) · Kölner Universitäts PublikationsServer (Universität zu Köln)

FREQUÊNCIA DE MUTAÇÕES NOS GENES MSH6, PMS1, PMS2, TP53 E CHEK2 EM PACIENTES SUSPEITOS DE SÍNDROME DE LYNCH

da Silva, F. C. C. (2011)

Relationships between DNA and Histone Modifications

Pfeifer, G. P., & Hahn, M. A. (2014) · Elsevier eBooks · doi:10.1016/b978-0-12-801238-3.00092-1

In utero exposure to di-(2-ethylhexyl) phthalate reveals the presence of an adrenal-testis axis regulating androgen formation

Arguelles, M. A., & Benjamin, D. (2011) · DigitalGeorgetown (Georgetown University Library)

Beziehungen zwischen der Chromatinstruktur und Apoptose-bedingter DNA-Fragmentierung

Schliephacke, T. (2001) · eDiss (Georg-August-Universität Göttingen) · doi:10.53846/goediss-3581

The Arabidopsis thaliana Heat Shock Transcription Factor A1b Transcriptional Regulatory Network

Albhilal, W. S. (2015) · Open Access at Essex (University of Essex)

Deoxyribonucleic acid (DNA) methylation and its impact in generation of cancer

Rajeswari, J. J., & Chakravarthi, G. P. (2014) · The Journal of Clinical and Scientific Research · doi:10.15380/2277-5706.jcsr.13.070

Fremde DNA im menschlichen Genom: Konsequenzen für das Wirts- und das Fremdgenom

Fakultät, N. (2013)

Die Reaktivierung der FMR1-Transkription in Fibroblasten von Patienten mit Fragilem-X-Syndrom durch Methotrexat

Gärtner, J. (2014)

Fehlregulation der DNA-Methylierung in urologischen Karzinomen

Ackermann, R. (2004)

Characterization of transcription factors in plasmodium falciparum

Luah, Y. H. (2014) · DR-NTU (Nanyang Technological University) · doi:10.32657/10356/61728

Regulatory Mechanism of Insulin-Like Growth Factor Binding Protein-3 in Non-Small Cell Lung Cancer

Chang, Y. S., Lee, H., Kim, Y. S., Kim, H. J., Chang, J., Ahn, C., Kim, S. K., & Kim, S. K. (2004) · Tuberculosis & respiratory diseases

FINAL APPROVAL OF DISSERTATION Doctor of Philosophy in Biomedical Sciences Computer Aided Analysis of Restriction Landmark Genomic Scanning Images from Tumor and Cell Line Models

Patrick, J. L. (2001)

DNA Demethylating Agents

Brown, R. E. (2004) · CRC Press eBooks · doi:10.1201/9780203487013.ch13

Proteins That Modulate DNA Methylation Aberrations in Cancer

Tollefsbol, T. O. (2008) · doi:10.1201/9781420045802-9

Embryo Manipulation for Biotechnology in Domestic Animals

Tatham, B. (2006) · Books in soils, plants, and the environment · doi:10.1201/9781420049275.ch18

Nutritional and Lifestyle Impact on Epigenetics and Cancer

Shankar, E., & Gupta, S. (2016) · Energy balance and cancer · doi:10.1007/978-3-319-41610-6_4

Untersuchung zur transkriptionellen Regulation des Angiopoietin-2 in humanen Endothelzellen

Jonas, W. (2010) · edoc Publication server (Humboldt University of Berlin) · doi:10.18452/16180

Epigenetic repression of the NFATc1 transcription factor in human lymphomas

Akimzhanov, A. M. (2005) · Online Publication Service of Würzburg University (Würzburg University)

A complex interplay of regulatory domains controls cell cycle dependent subnuclear localization of DNMT1 and is required for the maintenance of epigenetic information

Easwaran, H. (2004) · doi:10.18452/15069

Pharmako-epigenetische Untersuchungen zur Therapieresistenz im Neuroblastom

Schumacher, A. (2010) · DuEPublico (University of Duisburg-Essen)

Genetic and Epigenetic Characterization of Colorectal and Endometrial Cancer

Kuismanen, S. A. (2006) · Työväentutkimus Vuosikirja

Methylation-Induced Repression— Belts, Braces, and Chromatin

Bird, A. P., & Wolffe, A. P. (1999) · Cell · doi:10.1016/s0092-8674(00)81532-9 · Cited by 1,858

Role of DNA methylation in the regulation of transcription

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Mechanisms of transcriptional repression by DNA methylation

Kaluscha, S. (2021) · edoc (University of Basel) · doi:10.5451/unibas-ep89851

Effects of cytosine methylation on transcription factor binding sites

Medvedeva, Y. A., Khamis, A. M., Kulakovskiy, I. V., Ba-Alawi, W., Bhuyan, M. S. I., Kawaji, H., Lassmann, T., Harbers, M., Forrest, A. R. R., & Bajić, V. B. (2014) · BMC Genomics · doi:10.1186/1471-2164-15-119 · Cited by 262

The Effect of DNA Methylation on DNA-Protein Interactions and on the Regulation of Gene Expression

Doerfler, W. (1986) · Springer eBooks · doi:10.1007/978-3-642-73325-3_31 · Cited by 2