CoChat
Sign Up
Cited by 93

The DOI matches its Crossref record; 17 of the 17 references it cites were found in a registry or an index.

TET2 Regulates Mast Cell Differentiation and Proliferation through Catalytic and Non-catalytic Activities

Montagner, Sara, Leoni, Cristina, Emming, Stefan, Della Chiara, Giulia, Balestrieri, Chiara, Barozzi, Iros, Piccolo, Viviana, Togher, Susan, Ko, Myunggon, Rao, Anjana, Natoli, Gioacchino, Monticelli, Silvia·2016·Cell Reports
DOI 10.1016/j.celrep.2016.04.044PMC PMC5584687
Open this paper in CoChat — free account

Overview

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1016/j.celrep.2016.04.044

Cites

17 of 17 references verified0 citation errors · 0 not checkable

Statistics

Verification

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Citations

Cites

Research works printed but not linked: 42

  1. Abdel-Wahab, 2009, Genetic characterization of TET1, TET2, and TET3 alterations in myeloid malignancies, Blood, 114, 144, 10.1182/blood-2009-03-210039 · DOI · Paper page
  2. Amati, 2001, Function of the c-Myc oncoprotein in chromatin remodeling and transcription, Biochim. Biophys. Acta, 1471, M135
  3. An, 2015, Acute loss of TET function results in aggressive myeloid cancer in mice, Nat. Commun., 6, 10071, 10.1038/ncomms10071 · DOI
  4. Barozzi, 2014, Coregulation of transcription factor binding and nucleosome occupancy through DNA features of mammalian enhancers, Mol. Cell, 54, 844, 10.1016/j.molcel.2014.04.006 · DOI · Paper page
  5. Boyle, 2004, GO:TermFinder--open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes, Bioinformatics, 20, 3710, 10.1093/bioinformatics/bth456 · DOI · Paper page
  6. Cashman, 1992, Neuroblastoma x spinal cord (NSC) hybrid cell lines resemble developing motor neurons, Dev. Dyn., 194, 209, 10.1002/aja.1001940306 · DOI
  7. Chen, 2013, TET2 promotes histone O-GlcNAcylation during gene transcription, Nature, 493, 561, 10.1038/nature11742 · DOI · Paper page
  8. De Vita, 2014, Loss of function of TET2 cooperates with constitutively active KIT in murine and human models of mastocytosis, PLoS ONE, 9, e96209, 10.1371/journal.pone.0096209 · DOI
  9. Deho’, 2014, Two functionally distinct subsets of mast cells discriminated By IL-2-independent CD25 activities, J. Immunol., 193, 2196, 10.4049/jimmunol.1400516 · DOI
  10. Deplus, 2013, TET2 and TET3 regulate GlcNAcylation and H3K4 methylation through OGT and SET1/COMPASS, EMBO J., 32, 645, 10.1038/emboj.2012.357 · DOI · Paper page
  11. Gallant, 2009, Myc’s secret life without Max, Cell Cycle, 8, 3848, 10.4161/cc.8.23.10088 · DOI
  12. Garber, 2012, A high-throughput chromatin immunoprecipitation approach reveals principles of dynamic gene regulation in mammals, Mol. Cell, 47, 810, 10.1016/j.molcel.2012.07.030 · DOI · Paper page
  13. Hahn, 2013, Dynamics of 5-hydroxymethylcytosine and chromatin marks in Mammalian neurogenesis, Cell Rep., 3, 291, 10.1016/j.celrep.2013.01.011 · DOI
  14. Heinz, 2010, Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities, Mol. Cell, 38, 576, 10.1016/j.molcel.2010.05.004 · DOI · Paper page
  15. Hon, 2014, 5mC oxidation by Tet2 modulates enhancer activity and timing of transcriptome reprogramming during differentiation, Mol. Cell, 56, 286, 10.1016/j.molcel.2014.08.026 · DOI · Paper page
  16. Huang, 2014, Connections between TET proteins and aberrant DNA modification in cancer, Trends Genet., 30, 464, 10.1016/j.tig.2014.07.005 · DOI
  17. Huang, 2014, Distinct roles of the methylcytosine oxidases Tet1 and Tet2 in mouse embryonic stem cells, Proc. Natl. Acad. Sci. USA, 111, 1361, 10.1073/pnas.1322921111 · DOI
  18. Iwasaki, 2006, The order of expression of transcription factors directs hierarchical specification of hematopoietic lineages, Genes Dev., 20, 3010, 10.1101/gad.1493506 · DOI · Paper page
  19. Ko, 2010, Impaired hydroxylation of 5-methylcytosine in myeloid cancers with mutant TET2, Nature, 468, 839, 10.1038/nature09586 · DOI · Paper page
  20. Ko, 2011, Ten-Eleven-Translocation 2 (TET2) negatively regulates homeostasis and differentiation of hematopoietic stem cells in mice, Proc. Natl. Acad. Sci. USA, 108, 14566, 10.1073/pnas.1112317108 · DOI · Paper page
  21. Ko, 2015, TET proteins and 5-methylcytosine oxidation in hematological cancers, Immunol. Rev., 263, 6, 10.1111/imr.12239 · DOI
  22. Langmead, 2012, Fast gapped-read alignment with Bowtie 2, Nat. Methods, 9, 357, 10.1038/nmeth.1923 · DOI · Paper page
  23. Leoni, 2015, Reduced DNA methylation and hydroxymethylation in patients with systemic mastocytosis, Eur. J. Haematol., 95, 566, 10.1111/ejh.12537 · DOI
  24. Li, 2009, The Sequence Alignment/Map format and SAMtools, Bioinformatics, 25, 2078, 10.1093/bioinformatics/btp352 · DOI · Paper page
  25. Livak, 2001, Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method, Methods, 25, 402, 10.1006/meth.2001.1262 · DOI · Paper page
  26. Lu, 2014, Role of Tet proteins in enhancer activity and telomere elongation, Genes Dev., 28, 2103, 10.1101/gad.248005.114 · DOI
  27. Mayoral, 2010, Stable overexpression of miRNAs in bone marrow-derived murine mast cells using lentiviral expression vectors, Methods Mol. Biol., 667, 205, 10.1007/978-1-60761-811-9_14 · DOI
  28. Mayoral, 2011, MiR-221 influences effector functions and actin cytoskeleton in mast cells, PLoS ONE, 6, e26133, 10.1371/journal.pone.0026133 · DOI
  29. Ostuni, 2013, Latent enhancers activated by stimulation in differentiated cells, Cell, 152, 157, 10.1016/j.cell.2012.12.018 · DOI · Paper page
  30. Paul, 2015, Transcriptional Heterogeneity and Lineage Commitment in Myeloid Progenitors, Cell, 163, 1663, 10.1016/j.cell.2015.11.013 · DOI · Paper page
  31. Qi, 2013, Antagonistic regulation by the transcription factors C/EBPα and MITF specifies basophil and mast cell fates, Immunity, 39, 97, 10.1016/j.immuni.2013.06.012 · DOI
  32. Quinlan, 2010, BEDTools: a flexible suite of utilities for comparing genomic features, Bioinformatics, 26, 841, 10.1093/bioinformatics/btq033 · DOI · Paper page
  33. Rishi, 2010, CpG methylation of half-CRE sequences creates C/EBPalpha binding sites that activate some tissue-specific genes, Proc. Natl. Acad. Sci. USA, 107, 20311, 10.1073/pnas.1008688107 · DOI
  34. Rusca, 2012, MiR-146a and NF-κB1 regulate mast cell survival and T lymphocyte differentiation, Mol. Cell. Biol., 32, 4432, 10.1128/MCB.00824-12 · DOI
  35. Song, 2011, Selective chemical labeling reveals the genome-wide distribution of 5-hydroxymethylcytosine, Nat. Biotechnol., 29, 68, 10.1038/nbt.1732 · DOI
  36. Soucie, 2012, In aggressive forms of mastocytosis, TET2 loss cooperates with c-KITD816V to transform mast cells, Blood, 120, 4846, 10.1182/blood-2011-12-397588 · DOI
  37. Tahiliani, 2009, Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1, Science, 324, 930, 10.1126/science.1170116 · DOI · Paper page
  38. Trapnell, 2012, Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks, Nat. Protoc., 7, 562, 10.1038/nprot.2012.016 · DOI
  39. Tsai, 1991, Induction of mast cell proliferation, maturation, and heparin synthesis by the rat c-kit ligand, stem cell factor, Proc. Natl. Acad. Sci. USA, 88, 6382, 10.1073/pnas.88.14.6382 · DOI
  40. Wu, 2011, Dual functions of Tet1 in transcriptional regulation in mouse embryonic stem cells, Nature, 473, 389, 10.1038/nature09934 · DOI · Paper page
  41. Yamanaka, 1997, Impaired granulopoiesis, myelodysplasia, and early lethality in CCAAT/enhancer binding protein epsilon-deficient mice, Proc. Natl. Acad. Sci. USA, 94, 13187, 10.1073/pnas.94.24.13187 · DOI · Paper page
  42. Zhang, 2008, Model-based analysis of ChIP-Seq (MACS), Genome Biol., 9, R137, 10.1186/gb-2008-9-9-r137 · DOI · Paper page

Cited by

See all 93

Metadata

Authors
Montagner, S., Leoni, C., Emming, S., Della Chiara, G., Balestrieri, C., Barozzi, I., Piccolo, V., Togher, S., Ko, M., Rao, A., Natoli, G., & Monticelli, S.
Venue
Cell Reports
Publisher
Elsevier BV
Published
2016-05
Volume
15
Issue
7
Pages
1566-1579
ISSN
2211-1247
DOI
10.1016/j.celrep.2016.04.044
PMC
PMC5584687
Cited by
93
References
17
Language
en
Update notices
erratum (2017-08-15)
Licence
Funders
  • Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (156875)
  • Novartis Foundation

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review