Klf15 orchestrates circadian nitrogen homeostasis
Open accessAbstract
Diurnal variation in nitrogen homeostasis is observed across phylogeny. But whether these are endogenous rhythms, and if so, molecular mechanisms that link nitrogen homeostasis to the circadian clock remain unknown. Here, we provide evidence that a clock-dependent peripheral oscillator, Krüppel-like factor 15 transcriptionally coordinates rhythmic expression of multiple enzymes involved in mammalian nitrogen homeostasis. In particular, Krüppel-like factor 15-deficient mice exhibit no discernable amino acid rhythm, and the rhythmicity of ammonia to urea detoxification is impaired. Of the external cues, feeding plays a dominant role in modulating Krüppel-like factor 15 rhythm and nitrogen homeostasis. Further, when all behavioral, environmental and dietary cues were controlled in humans, nitrogen homeostasis exhibited an endogenous circadian rhythmicity. Thus, in mammals, nitrogen homeostasis exhibits circadian rhythmicity, and is orchestrated by Krüppel-like factor 15.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Amino acid plasma concentrations are under endogenous circadian control through Krüppel-like factor 15-control of the rhythmic expression of multiple enzymes involved in mammalian nitrogen homeostasis.
“Recent research demonstrates that amino acid plasma concentrations are under endogenous circadian control, through Krüppel-like factor 15-control of the rhythmic expression of multiple enzymes involved in mammalian nitrogen homeostasis (Jeyaraj et al., 2012).”
From The impact of the circadian timing system on cardiovascular and metabolic function (2012) · cites this paper as Jeyaraj et al., 2012
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
Coordination of circadian timing in mammals
Reppert, S. M., & Weaver, D. R. (2002) · Nature · doi:10.1038/nature00965 · Cited by 4,379 · see citing works
Newgard, C. B., An, J., Bain, J. R., Muehlbauer, M. J., Stevens, R. D., Lien, L. F., Haqq, A. M., Shah, S. H., Arlotto, M., Slentz, C. A., et al. (2009) · Cell Metabolism · doi:10.1016/j.cmet.2009.02.002 · Cited by 3,165 · see citing works
Amino acids: Metabolism, functions, and nutrition
Wu, G. (2009) · Amino Acids · doi:10.1007/s00726-009-0269-0 · Cited by 3,004 · see citing works
Obesity and Metabolic Syndrome in Circadian <i>Clock</i> Mutant Mice
Turek, F. W., Joshu, C., Kohsaka, A., Lin, E., Ivanova, G., McDearmon, E., Laposky, A., Losee-Olson, S., Easton, A., Jensen, D. R., et al. (2005) · Science · doi:10.1126/science.1108750 · Cited by 2,485 · see citing works
Self-citationDibner, C., Schibler, U., & Albrecht, U. (2010) · Annual Review of Physiology · doi:10.1146/annurev-physiol-021909-135821 · Cited by 2,421 · see citing works
Self-citationDamiola, F., Le Minh, N., Preitner, N., Kornmann, B., Fleury-Olela, F., & Schibler, U. (2000) · Genes & Development · doi:10.1101/gad.183500 · Cited by 2,394 · see citing works
Adverse metabolic and cardiovascular consequences of circadian misalignment
Scheer, F. A. J. L., Hilton, M. F., Mantzoros, C. S., & Shea, S. A. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0808180106 · Cited by 2,351 · see citing works
Self-citationPreitner, N., Damiola, F., Luis-Lopez-Molina, Zakany, J., Duboule, D., Albrecht, U., & Schibler, U. (2002) · Cell · doi:10.1016/s0092-8674(02)00825-5 · Cited by 2,198 · see citing works
Self-citationMethods for cosinor-rhythmometry.
Nelson, W. E., Tong, Y. L., Lee, J. K., & Franz Halberg, A. (1979) · PubMed · Cited by 1,701 · see citing works
Molecular components of the mammalian circadian clock
Ko, C. H., & Takahashi, J. S. (2006) · Human Molecular Genetics · doi:10.1093/hmg/ddl207 · Cited by 1,657 · see citing works
Disruption of the clock components CLOCK and BMAL1 leads to hypoinsulinaemia and diabetes
Marcheva, B., Ramsey, K. M., Buhr, E. D., Kobayashi, Y., Su, H., Ko, C. H., Ivanova, G., Omura, C., Mo, S., Vitaterna, M. H., et al. (2010) · Nature · doi:10.1038/nature09253 · Cited by 1,525 · see citing works
Self-citationRudic, R. D., McNamara, P., Curtis, A.-M., Boston, R. C., Panda, S., Hogenesch, J. B., & FitzGerald, G. A. (2004) · PLoS Biology · doi:10.1371/journal.pbio.0020377 · Cited by 1,059 · see citing works
Physiological significance of a peripheral tissue circadian clock
Lamia, K. A., Storch, K.-F., & Weitz, C. J. (2008) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0806717105 · Cited by 1,048 · see citing works
Mammalian Krüppel-Like Factors in Health and Diseases
McConnell, B. B., & Yang, V. W. (2010) · Physiological Reviews · doi:10.1152/physrev.00058.2009 · Cited by 1,015 · see citing works
Branched-Chain Amino Acid Metabolism
Harper, A. E., Miller, R. H., & Block, K. P. (1984) · Annual Review of Nutrition · doi:10.1146/annurev.nu.04.070184.002205 · Cited by 1,011 · see citing works
Green, C. B., Takahashi, J. S., & Bass, J. (2008) · Cell · doi:10.1016/j.cell.2008.08.022 · Cited by 902 · cited 2× · see citing works
“…the CCM as centrally involved in regulating metabolic homeostasis, particularly with respect to glucose and lipid levels (Duez and Staels, 2008; Green et al., 2008; Lamia et al., 2008; Le Martelot et al., 2009; Marcheva 1 Published in &HOO0HWDEROLVP± which should be cited to refer to this…”
Self-citationNonredundant roles of the mPer1 and mPer2 genes in the mammalian circadian clock.
Zheng, B., Albrecht, U., Kaasik, K., Sage, M., Lu, W., Vaishnav, S., Li, Q., Sun, Z. S., Eichele, G., Bradley, A., et al. (2001) · Cell · doi:10.1016/s0092-8674(01)00380-4 · Cited by 900 · see citing works
Self-citationFelig, P. (1975) · Annual Review of Biochemistry · doi:10.1146/annurev.bi.44.070175.004441 · Cited by 789 · see citing works
Amino-acid imbalance explains extension of lifespan by dietary restriction in Drosophila
Grandison, R. C., Piper, M. D. W., & Partridge, L. (2009) · Nature · doi:10.1038/nature08619 · Cited by 777 · see citing works
Time of feeding and the intrinsic circadian clock drive rhythms in hepatic gene expression.
Vollmers, C., Gill, S., DiTacchio, L., Pulivarthy, S. R., Le, H. D., & Panda, S. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0909591106 · Cited by 765 · see citing works
Branched-Chain Amino Acid Metabolism
Yudkoff, M. (1999) · Cited by 763 · see citing works
R EGULATION OF E NZYMES OF THE U REA C YCLE AND A RGININE M ETABOLISM
Morris, S. M. (2002) · Annual Review of Nutrition · doi:10.1146/annurev.nutr.22.110801.140547 · Cited by 727 · see citing works
Miller, I. J., & Bieker, J. J. (1993) · Molecular and Cellular Biology · doi:10.1128/mcb.13.5.2776-2786.1993 · Cited by 725 · see citing works
Rev-erbα, a Heme Sensor That Coordinates Metabolic and Circadian Pathways
Yin, L., Wu, N., Curtin, J. C., Qatanani, M., Szwergold, N. R., Reid, R. A., Waitt, G. M., Parks, D. J., Pearce, K. H., Wisely, G. B., et al. (2007) · Science · doi:10.1126/science.1150179 · Cited by 707 · see citing works
Ripperger, J. A., & Schibler, U. (2006) · Nature Genetics · doi:10.1038/ng1738 · Cited by 593 · see citing works
Self-citationD'Antona, G., Ragni, M., Cardile, A., Tedesco, L., Dossena, M., Bruttini, F., Caliaro, F., Corsetti, G., Bottinelli, R., Carruba, M. O., et al. (2010) · Cell Metabolism · doi:10.1016/j.cmet.2010.08.016 · Cited by 568 · see citing works
Circadian orchestration of the hepatic proteome
Reddy, A. B., Karp, N. A., Maywood, E. S., Sage, E. A., Deery, M., O'Neill, J. S., Wong, G. K. Y., Chesham, J., Odell, M., Lilley, K. S., et al. (2006) · Current Biology · doi:10.1016/j.cub.2006.04.026 · Cited by 548 · see citing works
Rey, G., Cesbron, F., Rougemont, J., Reinke, H., Brunner, M., & Naef, F. (2011) · PLoS Biology · doi:10.1371/journal.pbio.1000595 · Cited by 473 · see citing works
Shah, S. H., Bain, J. R., Muehlbauer, M. J., Stevens, R. D., Crosslin, D. R., Haynes, C. S., Dungan, J., Newby, L. K., Hauser, E. R., Ginsburg, G. S., et al. (2010) · Circulation Cardiovascular Genetics · doi:10.1161/circgenetics.109.852814 · Cited by 468 · see citing works
REV-ERBα Participates in Circadian SREBP Signaling and Bile Acid Homeostasis
Martelot, G. L., Claudel, T., Gatfield, D., Schaad, O., Kornmann, B., Sasso, G. L., Moschetta, A., & Schibler, U. (2009) · PLoS Biology · doi:10.1371/journal.pbio.1000181 · Cited by 448 · see citing works
Human Responses to the Geophysical Daily, Annual and Lunar Cycles
Foster, R. G., & Roenneberg, T. (2008) · Current Biology · doi:10.1016/j.cub.2008.07.003 · Cited by 410 · see citing works
Dependence of Mouse Embryonic Stem Cells on Threonine Catabolism
Wang, J., Alexander, P. B., Wu, L. C., Hammer, R. E., Cleaver, O. B., & McKnight, S. L. (2009) · Science · doi:10.1126/science.1173288 · Cited by 365 · see citing works
Measurement of internal body time by blood metabolomics
Minami, Y., Kasukawa, T., Kakazu, Y., Iigo, M., Sugimoto, M., Ikeda, S., Yasui, A., van der Horst, G. T. J., Soga, T., & Ueda, H. R. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0900617106 · Cited by 261 · see citing works
Cyclic changes in metabolic state during the life of a yeast cell
Tu, B. P., Mohler, R. E., Liu, J. C., Dombek, K. M., Young, E. T., Synovec, R. E., & McKnight, S. L. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0708365104 · Cited by 260 · see citing works
Regulation of Gluconeogenesis by Krüppel-like Factor 15
Gray, S., Wang, B., Orihuela, Y., Hong, E., Fisch, S., Haldar, S. M., Cline, G. W., Kim, J. K., Peroni, O. D., Kahn, B. B., et al. (2007) · Cell Metabolism · doi:10.1016/j.cmet.2007.03.002 · Cited by 246 · see citing works
Self-citationNeurological implications of urea cycle disorders
Gropman, A. L., Summar, M. L., & Leonard, J. V. (2007) · Journal of Inherited Metabolic Disease · doi:10.1007/s10545-007-0709-5 · Cited by 219 · see citing works
Leptin Reduces Pathology and Improves Memory in a Transgenic Mouse Model of Alzheimer's Disease
Greco, S. J., Bryan, K. J., Sarkar, S., Zhu, X., Smith, M. A., Ashford, J. W., Johnston, J. M., Tezapsidis, N., & Casadesús, G. (2010) · Journal of Alzheimer s Disease · doi:10.3233/jad-2010-1308 · Cited by 218 · see citing works
Self-citationKruppel-like factor 15 is a regulator of cardiomyocyte hypertrophy
Fisch, S., Gray, S., Heymans, S. R. B., Haldar, S. M., Wang, B., Pfister, O., Cui, L., Kumar, A., Lin, Z., SenBanerjee, S., et al. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0701981104 · Cited by 217 · see citing works
Self-citationHepatic glutamate metabolism: a tale of 2 hepatocytes
Brosnan, M. E., & Brosnan, J. T. (2009) · American Journal of Clinical Nutrition · doi:10.3945/ajcn.2009.27462z · Cited by 199 · see citing works
Luteinizing hormone modulates cognition and amyloid-β deposition in Alzheimer APP transgenic mice
Casadesús, G., Webber, K. M., Atwood, C., Pappolla, M. A., Perry, G. L., Bowen, R. L., & Smith, M. A. (2006) · Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease · doi:10.1016/j.bbadis.2006.01.008 · Cited by 190 · see citing works
Self-citationYe, X., Robinson, M. B., Batshaw, M. L., Furth, E. E., Smith, I. R. L., & Wilson, J. M. (1996) · Journal of Biological Chemistry · doi:10.1074/jbc.271.7.3639 · Cited by 153 · see citing works
Circadian Clock Gene Bmal1 Is Not Essential; Functional Replacement with its Paralog, Bmal2
Shi, S.-Q., Hida, A., McGuinness, O. P., Wasserman, D. H., Yamazaki, S., & Johnson, C. H. (2010) · Current Biology · doi:10.1016/j.cub.2009.12.034 · Cited by 150 · see citing works
The nuclear receptors Rev-erbs and RORs integrate circadian rhythms and metabolism
Duez, H., & Staels, B. (2008) · Diabetes and Vascular Disease Research · doi:10.3132/dvdr.2008.0014 · Cited by 132 · see citing works
Hogenesch, J. B., Gu, Y.-Z., Moran, S. M., Shimomura, K., Radcliffe, L. A., Takahashi, J. S., & Bradfield, C. A. (2000) · Journal of Neuroscience · doi:10.1523/jneurosci.20-13-j0002.2000 · Cited by 120 · see citing works
Disruption of mCry2 restores circadian rhythmicity in mPer2 mutant micePreprint
Oster, H., Yasui, A., van der Horst, G. T. J., & Albrecht, U. (2002) · Genes & Development · doi:10.1101/gad.233702 · Cited by 116 · see citing works
Self-citationKlf15 Deficiency Is a Molecular Link Between Heart Failure and Aortic Aneurysm Formation
Haldar, S. M., Lu, Y., Jeyaraj, D., Kawanami, D., Cui, Y., Eapen, S. J., Hao, C., Li, Y., Doughman, Y., Watanabe, M., et al. (2010) · Science Translational Medicine · doi:10.1126/scitranslmed.3000502 · Cited by 109 · see citing works
Self-citationExtracting transcription factor targets from ChIP-Seq data
Tuteja, G., White, P., Schug, J., & Kaestner, K. H. (2009) · Nucleic Acids Research · doi:10.1093/nar/gkp536 · Cited by 108 · see citing works
Circadian Periodicity of Blood Amino-acids in Adult Men
Feigin, R. D., Klainer, A. S., & Beisel, W. R. (1967) · Nature · doi:10.1038/215512b0 · Cited by 99 · see citing works
Bryan, K. J., Mudd, J. C., Richardson, S. L., Chang, J., Lee, H., Zhu, X., Smith, M. A., & Casadesús, G. (2009) · Journal of Neurochemistry · doi:10.1111/j.1471-4159.2009.06502.x · Cited by 70 · see citing works
Self-citationAmino Acid Metabolism of Pea Leaves
Bauer, A., Urquhart, A. A., & Joy, K. W. (1977) · PLANT PHYSIOLOGY · doi:10.1104/pp.59.5.915 · Cited by 67 · see citing works
Diurnal Variations of Nitrogenase Activity in the Field
Balandreau, J., Millier, C., & Dommergues, Y. R. (1974) · Applied Microbiology · doi:10.1128/am.27.4.662-665.1974 · Cited by 51 · see citing works
THE DIURNAL FLUCTUATION IN NITROGEN FIXATION IN THE NODULES OF ALNUS GLUTINOSA AND MYRICA GALE
Wheeler, C. T. (1969) · New Phytologist · doi:10.1111/j.1469-8137.1969.tb06471.x · Cited by 49 · see citing works
Fernstrom, J., Wurtman, R. J., Hammarstrom-Wiklund, B., et al. (1979) · American Journal of Clinical Nutrition · doi:10.1093/ajcn/32.9.1923 · Cited by 38 · see citing works
Lee, J. T., & Nussbaum, R. L. (1989) · Journal of Clinical Investigation · doi:10.1172/jci114360 · Cited by 34 · see citing works
Diurnal Variations of Nitrogenase Activity in the Field
Balandreau, J., Millier, C. R., & Dommergues, Y. R. (1974) · Applied Microbiology · doi:10.1128/aem.27.4.662-665.1974 · Cited by 34 · see citing works
Circadian Periodicity of Blood Amino-acids in Normal and Adrenalectomized Mice
Feigin, R. D., Dangerfield, H. G., & Beisel, W. R. (1969) · Nature · doi:10.1038/221094a0 · Cited by 33 · see citing works
Flagged first, then by citations
Cited by
Sorted by citations
Circadian physiology of metabolism
Panda, S. (2016) · Science · doi:10.1126/science.aah4967 · Cited by 1,092 · see citing works
Timing to perfection: the biology of central and peripheral circadian clocks
Albrecht, U. (2012) · Neuron · doi:10.1016/j.neuron.2012.04.006 · Cited by 915 · see citing works
Self-citationShih, D. M., Wang, Z., Lee, R., Meng, Y., Che, N., Charugundla, S., Qi, H., Wu, J., Pan, C., Brown, J. M., et al. (2015) · Journal of Lipid Research · doi:10.1194/jlr.m051680 · Cited by 335 · see citing works
Circadian Clock Control of Liver Metabolic Functions
Reinke, H., & Asher, G. (2016) · Gastroenterology · doi:10.1053/j.gastro.2015.11.043 · Cited by 321 · see citing works
Trimethylamine-N-oxide (TMAO)-induced atherosclerosis is associated with bile acid metabolism
Ding, L., Chang, M., Guo, Y., Zhang, L., Xue, C., Yanagita, T., Zhang, T., & Wang, Y. (2018) · Lipids in Health and Disease · doi:10.1186/s12944-018-0939-6 · Cited by 250 · see citing works
Self-citationThe impact of the circadian timing system on cardiovascular and metabolic function
Morris, C. J., Yang, J. N., & Scheer, F. A. J. L. (2012) · Progress in Brain Research · doi:10.1016/b978-0-444-59427-3.00019-8 · Cited by 215 · see citing works
Self-citationThe Liver in the Eyes of a Chronobiologist
Zwighaft, Z., Reinke, H., & Asher, G. (2016) · Journal of Biological Rhythms · doi:10.1177/0748730416633552 · Cited by 29 · see citing works
- Authors
- Jeyaraj, D., Scheer, F. A. J. L., Ripperger, J. A., Haldar, S. M., Lu, Y., Prosdocimo, D. A., Eapen, S. J., Eapen, B. L., Cui, Y., Mahabeleshwar, G. H., Lee, H.-G., Smith, M. A., Casadesus, G., Mintz, E. M., Sun, H., Wang, Y., Ramsey, K. M., Bass, J., Shea, S. A., Albrecht, U., & Jain, M. K.
- Affiliations
- MetroHealth (US)
- Brigham and Women's Hospital (US)
- University of Fribourg (CH)
- Case Western Reserve University (US)
- Kent State University (US)
- University of California, Los Angeles (US)
- Northwestern University (US)
- Corresponding author
- Jain, Mukesh K.
- ORCID
- Venue
- Cell Metabolism
- Publisher
- Elsevier BV
- Published
- 2012-03
- Volume
- 15
- Issue
- 3
- Pages
- 311-323
- ISSN
- 1550-4131 (ISSN-L)
- PMC
- PMC3299986
- OpenAlex
- W2165532538
- Cited by
- 154
- References
- 56
- Citations by year
- 2026: 6 · 2025: 10 · 2024: 20 · 2023: 9 · 2022: 6 · 2021: 19 · 2020: 16 · 2019: 11 · 2018: 11 · 2017: 7 · 2016: 8 · 2015: 9 · 2014: 10 · 2013: 7 · 2012: 5
- FWCI
- 4.36
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Licence
- Locations
- Cell Metabolism (publishedVersion)
- PubMed (publishedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- reroDoc Digital Library (submittedVersion)
- Funders
- National Heart, Lung, and Blood Institute (HL 084154, R01HL084154, HL094660, T32HL105338, HL 086548, K24HL076446, HL-076754, R00HL097023, HL075427, R01-HL09480601, R01HL110630, R01HL094806, R01HL075427, K99HL097023, R01HL072952, R01HL086548, HL097595, R01HL097593, R01HL103205, K08HL094660, P30HL101299, R01HL076754, HL097023, HL072952)
- National Institute of Diabetes and Digestive and Kidney Diseases (DK59637, DK059630, U24DK059637, U24DK059630)
- National Center for Research Resources (M01RR002635)
- Topics
- Life Sciences › Neuroscience › Endocrine and Autonomic Systems › Circadian rhythm and melatonin
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Kruppel-like factors research
- Health Sciences › Medicine › Physiology › Dietary Effects on Health
- Keywords
- KLF15, circadian clock, nitrogen homeostasis, ammonia detoxification, urea cycle, peripheral oscillators, feeding cues, endogenous rhythms
- MeSH terms
- Adult, Animals, Cell Line, DNA-Binding Proteins, Homeostasis, Humans, Male, Mice, Inbred C57BL, Nitrogen, Transcription Factors, Blotting, Western, Mice, Knockout, Chromatin Immunoprecipitation, Mice, Kruppel-Like Transcription Factors, Young Adult, Circadian Clocks, Real-Time Polymerase Chain Reaction
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review