Yeast metabolic engineering for hemicellulosic ethanol production

Towards industrial pentose-fermenting yeast strains

Hahn‐Hägerdal, B., Karhumaa, K., Fonseca, C., Spencer‐Martins, I., & Gorwa‐Grauslund, M. F. (2007) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-006-0827-2 · Cited by 784 · see citing works

Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis

Jeffries, T. W., Grigoriev, I. V., Grimwood, J., Laplaza, J. M., Aerts, A. L., Salamov, A. A., Schmutz, J., Lindquist, E., Dehal, P., Shapiro, H., et al. (2007) · Nature Biotechnology · doi:10.1038/nbt1290 · Cited by 492 · see citing works

Comparison of the xylose reductase-xylitol dehydrogenase and the xylose isomerase pathways for xylose fermentation by recombinant Saccharomyces cerevisiae

Karhumaa, K., Sánchez, R. G., Hahn‐Hägerdal, B., & Gorwa‐Grauslund, M. F. (2007) · Microbial Cell Factories · doi:10.1186/1475-2859-6-5 · Cited by 292 · see citing works

Metabolic Engineering for Pentose Utilization in Saccharomyces cerevisiae

Hahn‐Hägerdal, B., Karhumaa, K., Jeppsson, M., & Gorwa‐Grauslund, M. F. (2007) · Springer eBooks · doi:10.1007/10_2007_062 · Cited by 280 · see citing works

Rapid whole-genome mutational profiling using next-generation sequencing technologiesPreprint

Smith, D. R., Quinlan, A. R., Peckham, H. E., Makowsky, K., Tao, W., Woolf, B., Shen, L., Donahue, W. F., Tusneem, N. A., Strömberg, M. P., et al. (2008) · Genome Research · doi:10.1101/gr.077776.108 · Cited by 260 · see citing works

Novel Evolutionary Engineering Approach for Accelerated Utilization of Glucose, Xylose, and Arabinose Mixtures by Engineered <i>Saccharomyces cerevisiae</i> Strains

Wisselink, H. W., Toirkens, M. J., Wu, Q., Pronk, J. T., & van Maris, A. J. A. (2009) · Applied and Environmental Microbiology · doi:10.1128/aem.02268-08 · Cited by 247 · see citing works

Development of Efficient Xylose Fermentation in Saccharomyces cerevisiae: Xylose Isomerase as a Key Component

van Maris, A. J. A., Winkler, A. A., Kuyper, M., de Laat, W. T. A. M., van Dijken, J. P., & Pronk, J. T. (2007) · Advances in biochemical engineering, biotechnology · doi:10.1007/10_2007_057 · Cited by 245 · see citing works

Xylose transport studies with xylose-utilizing Saccharomyces cerevisiae strains expressing heterologous and homologous permeases

Saloheimo, A., Rauta, J., Stasyk, O. V., Sibirny, A. А., Penttilä, M. E., & Ruohonen, L. (2006) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-006-0747-1 · Cited by 210 · see citing works

Complete Reversal of Coenzyme Specificity of Xylitol Dehydrogenase and Increase of Thermostability by the Introduction of Structural Zinc

Watanabe, S., Kodaki, T., & Makino, K. (2004) · Journal of Biological Chemistry · doi:10.1074/jbc.m409443200 · Cited by 195 · see citing works

Ethanol production from xylose by recombinant Saccharomyces cerevisiae expressing protein-engineered NADH-preferring xylose reductase from Pichia stipitis

Watanabe, S., Saleh, A. A., Pack, S. P., Annaluru, N., Kodaki, T., & Makino, K. (2007) · Microbiology · doi:10.1099/mic.0.2007/007856-0 · Cited by 189 · see citing works

Xylose isomerase from polycentric fungus Orpinomyces: gene sequencing, cloning, and expression in Saccharomyces cerevisiae for bioconversion of xylose to ethanol

Madhavan, A., Tamalampudi, S., Ushida, K., Kanai, D., Katahira, S., Srivastava, A., Fukuda, H., Bisaria, V. S., & Kondo, A. (2008) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-008-1794-6 · Cited by 180 · see citing works

Two glucose/xylose transporter genes from the yeast Candida intermedia: first molecular characterization of a yeast xylose–H+ symporter

Leandro, M. J., Gonçalves, P. M., & Spencer‐Martins, I. (2006) · Biochemical Journal · doi:10.1042/bj20051465 · Cited by 168 · see citing works

High activity of xylose reductase and xylitol dehydrogenase improves xylose fermentation by recombinant Saccharomyces cerevisiae

Karhumaa, K., Fromanger, R., Hahn‐Hägerdal, B., & Gorwa‐Grauslund, M. F. (2006) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-006-0575-3 · Cited by 151 · see citing works

Altering the coenzyme preference of xylose reductase to favor utilization of NADH enhances ethanol yield from xylose in a metabolically engineered strain of Saccharomyces cerevisiae

Petschacher, B., & Nidetzky, B. (2008) · Microbial Cell Factories · doi:10.1186/1475-2859-7-9 · Cited by 146 · see citing works

Expression of a heterologous xylose transporter in a Saccharomyces cerevisiae strain engineered to utilize xylose improves aerobic xylose consumption

Hector, R. E., Qureshi, N., Hughes, S. R., & Cotta, M. A. (2008) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-008-1583-2 · Cited by 136 · see citing works

Characterisation of glucose transport inSaccharomyces cerevisiaewith plasma membrane vesicles (countertransport) and intact cells (initial uptake) with single Hxt1, Hxt2, Hxt3, Hxt4, Hxt6, Hxt7 or Gal2 transporters

Maier, A., Völker, B., Boles, E., & Fuhrmann, G. F. (2002) · FEMS Yeast Research · doi:10.1111/j.1567-1364.2002.tb00121.x · Cited by 136 · see citing works

Bioethanol production performance of five recombinant strains of laboratory and industrial xylose-fermenting Saccharomyces cerevisiae

Matsushika, A., Inoue, H., Murakami, K., Takimura, O., & Sawayama, S. (2009) · Bioresource Technology · doi:10.1016/j.biortech.2008.11.047 · Cited by 131 · see citing works

Improvement of ethanol productivity during xylose and glucose co-fermentation by xylose-assimilating S. cerevisiae via expression of glucose transporter Sut1

Katahira, S., Ito, M., Takema, H., Fujita, Y., Tanino, T., Tanaka, T., Fukuda, H., & Kondo, A. (2008) · Enzyme and Microbial Technology · doi:10.1016/j.enzmictec.2008.03.001 · Cited by 130 · see citing works

The coenzyme specificity of Candida tenuis xylose reductase (AKR2B5) explored by site-directed mutagenesis and X-ray crystallography

Petschacher, B., Leitgeb, S., Kavanagh, K. L., Wilson, D. K., & Nidetzky, B. (2004) · Biochemical Journal · doi:10.1042/bj20040363 · Cited by 123 · see citing works

Genome‐scale analysis of Saccharomyces cerevisiae metabolism and ethanol production in fed‐batch culture

Hjersted, J. L., Henson, M. A., & Mahadevan, R. (2007) · Biotechnology and Bioengineering · doi:10.1002/bit.21332 · Cited by 122 · see citing works

Expression of the Gxf1 transporter from Candida intermedia improves fermentation performance in recombinant xylose-utilizing Saccharomyces cerevisiae

Runquist, D., Fonseca, C., Rådström, P., Spencer‐Martins, I., & Hahn‐Hägerdal, B. (2008) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-008-1773-y · Cited by 121 · see citing works

Ethanol production from xylose by recombinant Saccharomyces cerevisiae expressing protein engineered NADP+-dependent xylitol dehydrogenase

Watanabe, S., Saleh, A. A., Pack, S. P., Annaluru, N., Kodaki, T., & Makino, K. (2007) · Journal of Biotechnology · doi:10.1016/j.jbiotec.2007.04.019 · Cited by 115 · see citing works

Expression of protein engineered NADP+-dependent xylitol dehydrogenase increases ethanol production from xylose in recombinant Saccharomyces cerevisiae

Matsushika, A., Watanabe, S., Kodaki, T., Makino, K., Inoue, H., Murakami, K., Takimura, O., & Sawayama, S. (2008) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-008-1649-1 · Cited by 114 · see citing works

Regulation of xylose metabolism in recombinant Saccharomyces cerevisiae

Salusjärvi, L., Kankainen, M., Soliymani, R., Pitkänen, J., Penttilä, M. E., & Ruohonen, L. (2008) · Microbial Cell Factories · doi:10.1186/1475-2859-7-18 · Cited by 106 · see citing works

Bioethanol production from xylose by recombinant Saccharomyces cerevisiae expressing xylose reductase, NADP+-dependent xylitol dehydrogenase, and xylulokinase

Matsushika, A., Watanabe, S., Kodaki, T., Makino, K., & Sawayama, S. (2008) · Journal of Bioscience and Bioengineering · doi:10.1263/jbb.105.296 · Cited by 104 · see citing works

Deleting the para-nitrophenyl phosphatase (pNPPase), PHO13, in recombinant Saccharomyces cerevisiae improves growth and ethanol production on d-xylose

Vleet, J. R. H. V., Jeffries, T. W., & Olsson, L. (2008) · Metabolic Engineering · doi:10.1016/j.ymben.2007.12.002 · Cited by 98 · see citing works

Production of ethanol from corn stover hemicellulose hydrolyzate using Pichia stipitis

Agbogbo, F. K., & Wenger, K. S. (2007) · Journal of Industrial Microbiology & Biotechnology · doi:10.1007/s10295-007-0247-z · Cited by 90 · see citing works

Alcoholic fermentation of xylose and mixed sugars using recombinant Saccharomyces cerevisiae engineered for xylose utilization

Madhavan, A., Tamalampudi, S., Srivastava, A., Fukuda, H., Bisaria, V. S., & Kondo, A. (2009) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-008-1818-2 · Cited by 87 · see citing works

Transposon Mutagenesis To Improve the Growth of Recombinant Saccharomyces cerevisiae on d -Xylose

Ni, H., Laplaza, J. M., & Jeffries, T. W. (2007) · Applied and Environmental Microbiology · doi:10.1128/aem.02564-06 · Cited by 84 · see citing works

Modeling simultaneous glucose and xylose uptake in Saccharomyces cerevisiae from kinetics and gene expression of sugar transporters

Bertilsson, M., Andersson, J., & Lidén, G. (2007) · Bioprocess and Biosystems Engineering · doi:10.1007/s00449-007-0169-1 · Cited by 82 · see citing works

Comparing the xylose reductase/xylitol dehydrogenase and xylose isomerase pathways in arabinose and xylose fermenting Saccharomyces cerevisiae strains

Bettiga, M., Hahn‐Hägerdal, B., & Gorwa‐Grauslund, M. F. (2008) · Biotechnology for Biofuels · doi:10.1186/1754-6834-1-16 · Cited by 80 · see citing works

Altering coenzyme specificity of Pichia stipitis xylose reductase by the semi-rational approach CASTing

Liang, L., Zhang, J., & Lin, Z. (2007) · Microbial Cell Factories · doi:10.1186/1475-2859-6-36 · Cited by 77 · see citing works

Eukaryotic and Bacterial Gene Clusters Related to an Alternative Pathway of Nonphosphorylated L-Rhamnose Metabolism

Watanabe, S., Saimura, M., & Makino, K. (2008) · Journal of Biological Chemistry · doi:10.1074/jbc.m801065200 · Cited by 75 · see citing works

Efficient bioethanol production from xylose by recombinant saccharomyces cerevisiae requires high activity of xylose reductase and moderate xylulokinase activity

Matsushika, A., & Sawayama, S. (2008) · Journal of Bioscience and Bioengineering · doi:10.1263/jbb.106.306 · Cited by 72 · see citing works

Pichia stipitis xylose reductase helps detoxifying lignocellulosic hydrolysate by reducing 5-hydroxymethyl-furfural (HMF)

de Almeida, J. R. M., Modig, T., Röder, A., Lidén, G., & Gorwa‐Grauslund, M. F. (2008) · Biotechnology for Biofuels · doi:10.1186/1754-6834-1-12 · Cited by 72 · see citing works

Overexpression of pyruvate decarboxylase in the yeastHansenula polymorpharesults in increased ethanol yield in high-temperature fermentation of xylose

Ishchuk, O. P., Voronovsky, A. Y., Stasyk, O. V., Gayda, G. Z., Gonchar, M. V., Abbas, C. A., & Sibirny, A. А. (2008) · FEMS Yeast Research · doi:10.1111/j.1567-1364.2008.00429.x · Cited by 69 · see citing works

Overexpression of bacterial xylose isomerase and yeast host xylulokinase improves xylose alcoholic fermentation in the thermotolerant yeastHansenula polymorpha

Dmytruk, O. V., Voronovsky, A. Y., Abbas, C. A., Dmytruk, K. V., Ishchuk, O. P., & Sibirny, A. А. (2007) · FEMS Yeast Research · doi:10.1111/j.1567-1364.2007.00289.x · Cited by 58 · see citing works

Insights from modeling the 3D structure of NAD(P)H-dependent d-xylose reductase of Pichia stipitis and its binding interactions with NAD and NADP

Wang, J., Wei, D., Lin, Y. C., Wang, Y., Du, H., Li, Y.-X., & Chou, K. (2007) · Biochemical and Biophysical Research Communications · doi:10.1016/j.bbrc.2007.05.101 · Cited by 55 · see citing works

Engineering of xylose reductase and overexpression of xylitol dehydrogenase and xylulokinase improves xylose alcoholic fermentation in the thermotolerant yeast Hansenula polymorpha

Dmytruk, O. V., Dmytruk, K. V., Abbas, C. A., Voronovsky, A. Y., & Sibirny, A. А. (2008) · Microbial Cell Factories · doi:10.1186/1475-2859-7-21 · Cited by 55 · see citing works

Identification of common traits in improved xylose‐growing Saccharomyces cerevisiae for inverse metabolic engineering

Bengtsson, O., Jeppsson, M., Sonderegger, M., Parachin, N. S., Sauer, U., Hahn‐Hägerdal, B., & Gorwa‐Grauslund, M. F. (2008) · Yeast · doi:10.1002/yea.1638 · Cited by 50 · see citing works

The Positive Effect of the Decreased NADPH-Preferring Activity of Xylose Reductase fromPichia stipitison Ethanol Production Using Xylose-Fermenting RecombinantSaccharomyces cerevisiae

Watanabe, S., Pack, S. P., Saleh, A. A., Annaluru, N., Kodaki, T., & Makino, K. (2007) · Bioscience Biotechnology and Biochemistry · doi:10.1271/bbb.70104 · Cited by 47 · see citing works

Structure-Guided Engineering of Xylitol Dehydrogenase Cosubstrate Specificity

Ehrensberger, A. H., Elling, R. A., & Wilson, D. K. (2006) · Structure · doi:10.1016/j.str.2005.11.016 · Cited by 46 · see citing works

The expression in Saccharomyces cerevisiae of a glucose/xylose symporter from Candida intermedia is affected by the presence of a glucose/xylose facilitator

Leandro, M. J., Spencer‐Martins, I., & Gonçalves, P. M. (2008) · Microbiology · doi:10.1099/mic.0.2007/015511-0 · Cited by 45 · see citing works

Transcription of hexose transporters of Saccharomyces cerevisiae is affected by change in oxygen provision

Rintala, E., Wiebe, M. G., Tamminen, A., Ruohonen, L., & Penttilä, M. E. (2008) · BMC Microbiology · doi:10.1186/1471-2180-8-53 · Cited by 40 · see citing works

Culture nutrition and physiology impact the inhibitor tolerance of the yeast Pichia stipitis NRRL Y‐7124

Slininger, P. J., Gorsich, S. W., & Liu, Z. L. (2008) · Biotechnology and Bioengineering · doi:10.1002/bit.22110 · Cited by 39 · see citing works

Effect of the reversal of coenzyme specificity by expression of mutated Pichia stipitis xylitol dehydrogenase in recombinant Saccharomyces cerevisiae

Hou, J., Shen, Y., Li, X. P., & Bao, X. M. (2007) · Letters in Applied Microbiology · doi:10.1111/j.1472-765x.2007.02165.x · Cited by 32 · see citing works

Engineering the Pichia stipitis Genome for Fermentation of Hemicellulose Hydrolysates

Jeffries, T. W. (2014) · Bioenergy · doi:10.1128/9781555815547.ch3 · Cited by 24 · see citing works

Identification in the yeast Pichia stipitis of the first l ‐rhamnose‐1‐dehydrogenase gene

Koivistoinen, O. M., Hilditch, S., Voutilainen, S. P., Boer, H., Penttilä, M. E., & Richard, P. (2008) · FEBS Journal · doi:10.1111/j.1742-4658.2008.06392.x · Cited by 24 · see citing works

Metabolic fate of l ‐lactaldehyde derived from an alternative l ‐rhamnose pathway

Watanabe, S., Sommani, P., & Makino, K. (2008) · FEBS Journal · doi:10.1111/j.1742-4658.2008.06645.x · Cited by 20 · see citing works

Construction of a Recombinant S. cerevisiae Expressing a Fusion Protein and Study on the Effect of Converting Xylose and Glucose to Ethanol

Zhang, J., Tian, S., Zhang, Y., & Yang, X. (2008) · Applied Biochemistry and Biotechnology · doi:10.1007/s12010-008-8203-6 · Cited by 9 · see citing works

Hemicelluloses for fuel ethanol: A review

Gírio, F. M., Fonseca, C., Carvalheiro, F., Duarte, L. C., Marques, S., & Bogel‐Łukasik, R. (2010) · Bioresource Technology · doi:10.1016/j.biortech.2010.01.088 · Cited by 1,590 · see citing works

Deconstruction of lignocellulosic biomass with ionic liquids

Brandt, A., Gräsvik, J., Hallett, J. P., & Welton, T. (2013) · Green Chemistry · doi:10.1039/c2gc36364j · Cited by 1,557 · see citing works

Technological trends, global market, and challenges of bio-ethanol production

Mussatto, S. I., Dragone, G., Guimarães, P. M. R., Silva, J. P. A., Carneiro, L. M., Roberto, I. C., Vicente, A. A., Domingues, L., & Teixeira, J. A. (2010) · Biotechnology Advances · doi:10.1016/j.biotechadv.2010.07.001 · Cited by 730 · see citing works

The emergence of adaptive laboratory evolution as an efficient tool for biological discovery and industrial biotechnology

Sandberg, T. E., Salazar, M. J., Weng, L. L., Palsson, B. Ø., & Feist, A. M. (2019) · Metabolic Engineering · doi:10.1016/j.ymben.2019.08.004 · Cited by 558 · see citing works

Improving industrial yeast strains: exploiting natural and artificial diversity

Steensels, J., Snoek, T., Meersman, E., Nicolino, M. P., Voordeckers, K., & Verstrepen, K. J. (2014) · FEMS Microbiology Reviews · doi:10.1111/1574-6976.12073 · Cited by 486 · see citing works

Cellulosic ethanol production: Progress, challenges and strategies for solutions

Liu, C., Xiao, Y., Xia, X., Zhao, X., Peng, L., Srinophakun, P., & Bai, F. (2019) · Biotechnology Advances · doi:10.1016/j.biotechadv.2019.03.002 · Cited by 418 · see citing works

Plant cell wall polymers as precursors for biofuels

Pauly, M., & Keegstra, K. (2010) · Current Opinion in Plant Biology · doi:10.1016/j.pbi.2009.12.009 · Cited by 337 · see citing works

Xylose isomerase overexpression along with engineering of the pentose phosphate pathway and evolutionary engineering enable rapid xylose utilization and ethanol production by Saccharomyces cerevisiae

Zhou, H., Cheng, J.-S., Wang, B. L., Fink, G. R., & Stephanopoulos, G. (2012) · Metabolic Engineering · doi:10.1016/j.ymben.2012.07.011 · Cited by 287 · see citing works

Development of yeast cell factories for consolidated bioprocessing of lignocellulose to bioethanol through cell surface engineering

Hasunuma, T., & Kondo, A. (2011) · Biotechnology Advances · doi:10.1016/j.biotechadv.2011.10.011 · Cited by 259 · see citing works

Customized optimization of metabolic pathways by combinatorial transcriptional engineering

Du, J., Yuan, Y., Si, T., Lian, J., & Zhao, H. (2012) · Nucleic Acids Research · doi:10.1093/nar/gks549 · Cited by 239 · see citing works

Engineering of plant cell walls for enhanced biofuel production

Loqué, D., Scheller, H. V., & Pauly, M. (2015) · Current Opinion in Plant Biology · doi:10.1016/j.pbi.2015.05.018 · Cited by 225 · see citing works

Advances in consolidated bioprocessing systems for bioethanol and butanol production from biomass: a comprehensive review

Salehi Jouzani, G., & Taherzadeh, M. J. (2015) · Biofuel Research Journal · doi:10.18331/brj2015.2.1.4 · Cited by 224 · see citing works

Comparative genomics of xylose-fermenting fungi for enhanced biofuel production

Wohlbach, D. J., Kuo, A., Sato, T. K., Potts, K. M., Salamov, A. A., LaButti, K. M., Sun, H., Clum, A., Pangilinan, J. L., Lindquist, E., et al. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1103039108 · Cited by 212 · see citing works

Polygeneration as a future sustainable energy solution – A comprehensive review

Jana, K., Ray, A., Mansouri, M., Assadi, M., & De, S. K. (2017) · Applied Energy · doi:10.1016/j.apenergy.2017.05.129 · Cited by 208 · see citing works

Bioethanol production from pentose sugars: Current status and future prospects

Kuhad, R. C., Gupta, R., Khasa, Y. P., Singh, A., & Zhang, Y.-H. P. (2011) · Renewable and Sustainable Energy Reviews · doi:10.1016/j.rser.2011.07.058 · Cited by 205 · see citing works

Recombination machinery engineering facilitates metabolic engineering of the industrial yeast Pichia pastoris

Cai, P., Duan, X., Wu, X., Gao, L., Ye, M., & Zhou, Y. J. (2021) · Nucleic Acids Research · doi:10.1093/nar/gkab535 · Cited by 203 · see citing works

Rewiring yeast sugar transporter preference through modifying a conserved protein motif

Young, E. M., Tong, A., Bui, H., Spofford, C., & Alper, H. S. (2013) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1311970111 · Cited by 197 · see citing works

Plant cell walls to ethanol

Jordan, D. B., Bowman, M. J., Braker, J. D., Dien, B. S., Hector, R. E., Lee, C. C., Mertens, J. A., & Wagschal, K. C. (2012) · Biochemical Journal · doi:10.1042/bj20111922 · Cited by 185 · see citing works

Conceptual net energy output for biofuel production from lignocellulosic biomass through biorefining

Zhu, J. Y., & Zhuang, X. (2012) · Progress in Energy and Combustion Science · doi:10.1016/j.pecs.2012.03.007 · Cited by 163 · see citing works

Optimizing pentose utilization in yeast: the need for novel tools and approaches

Young, E. M., Lee, S., & Alper, H. S. (2010) · Biotechnology for Biofuels · doi:10.1186/1754-6834-3-24 · Cited by 158 · see citing works

Directed Evolution of Xylose Isomerase for Improved Xylose Catabolism and Fermentation in the Yeast Saccharomyces cerevisiae

Lee, S., Jellison, T., & Alper, H. S. (2012) · Applied and Environmental Microbiology · doi:10.1128/aem.01419-12 · Cited by 153 · see citing works

A molecular transporter engineering approach to improving xylose catabolism in Saccharomyces cerevisiae

Young, E. M., Comer, A. D., Huang, H., & Alper, H. S. (2012) · Metabolic Engineering · doi:10.1016/j.ymben.2012.03.004 · Cited by 138 · see citing works

Valorisation of xylose to renewable fuels and chemicals, an essential step in augmenting the commercial viability of lignocellulosic biorefineries

Narisetty, V., Cox, R., Bommareddy, R. R., Agrawal, D., Ahmạd, E., Pant, K. K., Chandel, A. K., Bhatia, S. K., Kumar, D., Binod, P., et al. (2021) · Sustainable Energy & Fuels · doi:10.1039/d1se00927c · Cited by 136 · see citing works

Biogas Production from Algae and Cyanobacteria Through Anaerobic Digestion: A Review, Analysis, and Research Needs

Bohutskyi, P., & Bouwer, E. J. (2012) · Springer eBooks · doi:10.1007/978-1-4614-3348-4_36 · Cited by 134 · see citing works

Scale‐up and integration of alkaline hydrogen peroxide pretreatment, enzymatic hydrolysis, and ethanolic fermentation

Banerjee, G., Car, S., Liu, T., Williams, D. L., Meza, S. L., Walton, J. D., & Hodge, D. B. (2011) · Biotechnology and Bioengineering · doi:10.1002/bit.24385 · Cited by 132 · see citing works

An analysis of net energy production and feedstock availability for biobutanol and bioethanol

Swana, J., Yan, Y. Z., Behnam, M., & Thompson, R. W. (2010) · Bioresource Technology · doi:10.1016/j.biortech.2010.08.051 · Cited by 125 · see citing works

Ethanol production from lignocellulosic hydrolysates using engineered Saccharomyces cerevisiae harboring xylose isomerase-based pathway

Ko, J. K., Um, Y., Woo, H. M., Kim, K. H., & Lee, S. (2016) · Bioresource Technology · doi:10.1016/j.biortech.2016.02.124 · Cited by 125 · see citing works

Genome-scale metabolic reconstructions of Pichia stipitis and Pichia pastoris and in silico evaluation of their potentials

Caspeta, L., Shoaie, S., Ågren, R., Nookaew, I., & Nielsen, J. (2012) · BMC Systems Biology · doi:10.1186/1752-0509-6-24 · Cited by 120 · see citing works

Engineering of Saccharomyces cerevisiae as a consolidated bioprocessing host to produce cellulosic ethanol: Recent advancements and current challenges

Sharma, J., Kumar, V., Prasad, R., & Gaur, N. A. (2022) · Biotechnology Advances · doi:10.1016/j.biotechadv.2022.107925 · Cited by 119 · see citing works

Systematic and evolutionary engineering of a xylose isomerase-based pathway in

Lee, S., Jellison, T., & Alper, H. S. (2014) · Biotechnology for Biofuels · doi:10.1186/s13068-014-0122-x · Cited by 118 · see citing works

Ethanol production from SPORL-pretreated lodgepole pine: preliminary evaluation of mass balance and process energy efficiency

Zhu, J., Zhu, W., O’Bryan, P. J., Dien, B. S., Tian, S., Gleisner, R., & Pan, X. (2010) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-009-2408-7 · Cited by 114 · see citing works

Bioethanol from Lignocellulosic Biomass

Zhao, X., Zi, L., Bai, F., Lin, H., Hao, X.-M., Yue, G., & Ho, N. W. Y. (2011) · Advances in biochemical engineering, biotechnology · doi:10.1007/10_2011_129 · Cited by 114 · see citing works

Microbial Degradation of Lignocellulosic Biomass

de Souza, W. R. (2013) · InTech eBooks · doi:10.5772/54325 · Cited by 112 · see citing works

Stress‐related challenges in pentose fermentation to ethanol by the yeast Saccharomyces cerevisiae

de Almeida, J. R. M., Runquist, D., Nogué, V. S. I., Lidén, G., & Gorwa‐Grauslund, M. F. (2011) · Biotechnology Journal · doi:10.1002/biot.201000301 · Cited by 111 · see citing works

Repeated-batch fermentation of lignocellulosic hydrolysate to ethanol using a hybrid Saccharomyces cerevisiae strain metabolically engineered for tolerance to acetic and formic acids

Sanda, T., Hasunuma, T., Matsuda, F., & Kondo, A. (2011) · Bioresource Technology · doi:10.1016/j.biortech.2011.06.028 · Cited by 108 · see citing works

Engineering of plants with improved properties as biofuels feedstocks by vessel-specific complementation of xylan biosynthesis mutants

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Directed Evolution Reveals Unexpected Epistatic Interactions That Alter Metabolic Regulation and Enable Anaerobic Xylose Use by Saccharomyces cerevisiae

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