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A Dynamic Unfolded Protein Response Contributes to the Control of Cortical Neurogenesis
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With progression of neurogenesis, two distinct lineage-related populations of neural progenitors coexist in the developing cortex: radial glia proliferative progenitors (PP) that expand the stem cell pool by symmetric divisions and neurogenic differentiative progenitors (DP) that divide to generate neurons (N).
“More specifically, with the progression of neurogenesis two distinct, lineagerelated populations of neural progenitors coexist in the developing cortex: radial glia, proliferative progenitors (PP) that expand the stem cell pool by symmetric divisions and neurogenic, differentiative progenitors (DP) that divide to generate neurons (N) (32,33).”
From MicroRNA profiling of mouse cortical progenitors and neurons reveals miR-486-5p as a regulator of neurogenesis (2020) · cites this paper as [33]
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Noctor, S. C., Martínez-Cerdeño, V., Ivic, L., & Kriegstein, A. R. (2004) · Nature Neuroscience · doi:10.1038/nn1172 · Cited by 2,229
The cell biology of neurogenesis
Götz, M., & Huttner, W. B. (2005) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm1739 · Cited by 2,130
Neurogenic radial glia in the outer subventricular zone of human neocortex
Hansen, D. V., Lui, J. H., Parker, P. R. L., & Kriegstein, A. R. (2010) · Nature · doi:10.1038/nature08845 · Cited by 1,388
Deep sequencing reveals 50 novel genes for recessive cognitive disorders
Najmabadi, H., Hu, H., Garshasbi, M., Zemojtel, T., Abedini, S. S., Chen, W., Hosseini, M., Behjati, F., Haas, S., Jamali, P., et al. (2011) · Nature · doi:10.1038/nature10423 · Cited by 965
Human ES cell-derived neural rosettes reveal a functionally distinct early neural stem cell stage
Elkabetz, Y., Panagiotakos, G., Al Shamy, G., Socci, N. D., Tabar, V., & Studer, L. (2008) · Genes & Development · doi:10.1101/gad.1616208 · Cited by 677
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Research works printed but not linked: 62
- Akella, 2010, MEC-17 is an alpha-tubulin acetyltransferase, Nature, 467, 218, 10.1038/nature09324 · DOI · Paper page
- Anders, 2010, Differential expression analysis for sequence count data, Genome Biol., 11, R106, 10.1186/gb-2010-11-10-r106 · DOI · Paper page
- Avila, 2014, Glycine receptors control the generation of projection neurons in the developing cerebral cortex, Cell Death Differ., 21, 1696, 10.1038/cdd.2014.75 · DOI
- Bauer, 2012, Translational control of cell division by Elongator, Cell Rep., 1, 424, 10.1016/j.celrep.2012.04.001 · DOI
- Betizeau, 2013, Precursor diversity and complexity of lineage relationships in the outer subventricular zone of the primate, Neuron, 80, 442, 10.1016/j.neuron.2013.09.032 · DOI · Paper page
- Caraux, 2005, PermutMatrix: a graphical environment to arrange gene expression profiles in optimal linear order, Bioinformatics, 21, 1280, 10.1093/bioinformatics/bti141 · DOI
- Chan, 2004, Herp stabilizes neuronal Ca2+ homeostasis and mitochondrial function during endoplasmic reticulum stress, J. Biol. Chem., 279, 28733, 10.1074/jbc.M404272200 · DOI
- Chen, 2009, Defects in tRNA modification associated with neurological and developmental dysfunctions in Caenorhabditis elegans elongator mutants, PLoS Genet., 5, e1000561, 10.1371/journal.pgen.1000561 · DOI
- Close, 2006, Transcription impairment and cell migration defects in elongator-depleted cells: implication for familial dysautonomia, Mol. Cell, 22, 521, 10.1016/j.molcel.2006.04.017 · DOI
- Creppe, 2009, Elongator controls the migration and differentiation of cortical neurons through acetylation of alpha-tubulin, Cell, 136, 551, 10.1016/j.cell.2008.11.043 · DOI
- Demay, 2014, The PERK pathway independently triggers apoptosis and a Rac1/Slpr/JNK/Dilp8 signaling favoring tissue homeostasis in a chronic ER stress Drosophila model, Cell Death Dis., 5, e1452, 10.1038/cddis.2014.403 · DOI
- English, 2013, Rab10 GTPase regulates ER dynamics and morphology, Nat. Cell Biol., 15, 169, 10.1038/ncb2647 · DOI · Paper page
- Englund, 2005, Pax6, Tbr2, and Tbr1 are expressed sequentially by radial glia, intermediate progenitor cells, and postmitotic neurons in developing neocortex, J. Neurosci., 25, 247, 10.1523/JNEUROSCI.2899-04.2005 · DOI · Paper page
- Esberg, 2006, Elevated levels of two tRNA species bypass the requirement for elongator complex in transcription and exocytosis, Mol. Cell, 24, 139, 10.1016/j.molcel.2006.07.031 · DOI
- Farkas, 2008, Insulinoma-associated 1 has a panneurogenic role and promotes the generation and expansion of basal progenitors in the developing mouse neocortex, Neuron, 60, 40, 10.1016/j.neuron.2008.09.020 · DOI
- Favaro, 2009, Hippocampal development and neural stem cell maintenance require Sox2-dependent regulation of Shh, Nat. Neurosci., 12, 1248, 10.1038/nn.2397 · DOI
- Fei, 2014, 3′ UTR-dependent, miR-92-mediated restriction of Tis21 expression maintains asymmetric neural stem cell division to ensure proper neocortex size, Cell Rep., 7, 398, 10.1016/j.celrep.2014.03.033 · DOI
- Fietz, 2010, OSVZ progenitors of human and ferret neocortex are epithelial-like and expand by integrin signaling, Nat. Neurosci., 13, 690, 10.1038/nn.2553 · DOI · Paper page
- Franceschini, 2013, STRING v9.1: protein-protein interaction networks, with increased coverage and integration, Nucleic Acids Res., 41, D808, 10.1093/nar/gks1094 · DOI · Paper page
- Glatt, 2013, Structural insights into Elongator function, Curr. Opin. Struct. Biol., 23, 235, 10.1016/j.sbi.2013.02.009 · DOI
- Glatt, 2012, The Elongator subcomplex Elp456 is a hexameric RecA-like ATPase, Nat. Struct. Mol. Biol., 19, 314, 10.1038/nsmb.2234 · DOI
- Götz, 1998, Pax6 controls radial glia differentiation in the cerebral cortex, Neuron, 21, 1031, 10.1016/S0896-6273(00)80621-2 · DOI
- Grosjean, 2010, Deciphering synonymous codons in the three domains of life: co-evolution with specific tRNA modification enzymes, FEBS Lett., 584, 252, 10.1016/j.febslet.2009.11.052 · DOI
- Hébert, 2000, Targeting of cre to the Foxg1 (BF-1) locus mediates loxP recombination in the telencephalon and other developing head structures, Dev. Biol., 222, 296, 10.1006/dbio.2000.9732 · DOI
- Heijmans, 2013, ER stress causes rapid loss of intestinal epithelial stemness through activation of the unfolded protein response, Cell Rep., 3, 1128, 10.1016/j.celrep.2013.02.031 · DOI · Paper page
- Hsu, 2006, The UCSC Known Genes, Bioinformatics, 22, 1036, 10.1093/bioinformatics/btl048 · DOI
- Huang, 2005, An early step in wobble uridine tRNA modification requires the Elongator complex, RNA, 11, 424, 10.1261/rna.7247705 · DOI
- Huang, 2009, Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources, Nat. Protoc., 4, 44, 10.1038/nprot.2008.211 · DOI · Paper page
- Hutton, 2011, SOX2 expression levels distinguish between neural progenitor populations of the developing dorsal telencephalon, Dev. Biol., 352, 40, 10.1016/j.ydbio.2011.01.015 · DOI
- Ingolia, 2012, The ribosome profiling strategy for monitoring translation in vivo by deep sequencing of ribosome-protected mRNA fragments, Nat. Protoc., 7, 1534, 10.1038/nprot.2012.086 · DOI
- Johansson, 2008, Eukaryotic wobble uridine modifications promote a functionally redundant decoding system, Mol. Cell. Biol., 28, 3301, 10.1128/MCB.01542-07 · DOI
- Karlsborn, 2014, Familial dysautonomia (FD) patients have reduced levels of the modified wobble nucleoside mcm(5)s(2)U in tRNA, Biochem. Biophys. Res. Commun., 454, 441, 10.1016/j.bbrc.2014.10.116 · DOI
- Katayama, 2004, Induction of neuronal death by ER stress in Alzheimer’s disease, J. Chem. Neuroanat., 28, 67, 10.1016/j.jchemneu.2003.12.004 · DOI
- Kouroku, 2007, ER stress (PERK/eIF2alpha phosphorylation) mediates the polyglutamine-induced LC3 conversion, an essential step for autophagy formation, Cell Death Differ., 14, 230, 10.1038/sj.cdd.4401984 · DOI · Paper page
- Laguesse, 2015, Progenitor genealogy in the developing cerebral cortex, Cell Tissue Res., 359, 17, 10.1007/s00441-014-1979-5 · DOI
- Langmead, 2009, Ultrafast and memory-efficient alignment of short DNA sequences to the human genome, Genome Biol., 10, R25, 10.1186/gb-2009-10-3-r25 · DOI · Paper page
- Leidel, 2009, Ubiquitin-related modifier Urm1 acts as a sulphur carrier in thiolation of eukaryotic transfer RNA, Nature, 458, 228, 10.1038/nature07643 · DOI
- Li, 2012, The anti-Shine-Dalgarno sequence drives translational pausing and codon choice in bacteria, Nature, 484, 538, 10.1038/nature10965 · DOI
- Lin, 2013, Ikbkap/Elp1 deficiency causes male infertility by disrupting meiotic progression, PLoS Genet., 9, e1003516, 10.1371/journal.pgen.1003516 · DOI
- Marthiens, 2013, Centrosome amplification causes microcephaly, Nat. Cell Biol., 15, 731, 10.1038/ncb2746 · DOI
- Miyata, 2004, Asymmetric production of surface-dividing and non-surface-dividing cortical progenitor cells, Development, 131, 3133, 10.1242/dev.01173 · DOI
- Nedialkova, 2015, Optimization of Codon Translation Rates via tRNA Modifications Maintains Proteome Integrity, Cell, 161, 1606, 10.1016/j.cell.2015.05.022 · DOI
- Nguyen, 2006, p27kip1 independently promotes neuronal differentiation and migration in the cerebral cortex, Genes Dev., 20, 1511, 10.1101/gad.377106 · DOI
- Nguyen, 2010, Elongator - an emerging role in neurological disorders, Trends Mol. Med., 16, 1, 10.1016/j.molmed.2009.11.002 · DOI
- Okada, 2010, A role for the elongator complex in zygotic paternal genome demethylation, Nature, 463, 554, 10.1038/nature08732 · DOI
- Petrakis, 2004, Molecular architecture, structure-function relationship, and importance of the Elp3 subunit for the RNA binding of holo-elongator, J. Biol. Chem., 279, 32087, 10.1074/jbc.M403361200 · DOI
- Phizicky, 2010, tRNA biology charges to the front, Genes Dev., 24, 1832, 10.1101/gad.1956510 · DOI
- Rezgui, 2013, tRNA tKUUU, tQUUG, and tEUUC wobble position modifications fine-tune protein translation by promoting ribosome A-site binding, Proc. Natl. Acad. Sci. USA, 110, 12289, 10.1073/pnas.1300781110 · DOI
- Rosekrans, 2015, ER stress induces epithelial differentiation in the mouse oesophagus, Gut, 64, 195, 10.1136/gutjnl-2013-306347 · DOI
- Rutkowski, 2006, Adaptation to ER stress is mediated by differential stabilities of pro-survival and pro-apoptotic mRNAs and proteins, PLoS Biol., 4, e374, 10.1371/journal.pbio.0040374 · DOI
- Selvadurai, 2014, Archaeal Elp3 catalyzes tRNA wobble uridine modification at C5 via a radical mechanism, Nat. Chem. Biol., 10, 810, 10.1038/nchembio.1610 · DOI
- Sessa, 2008, Tbr2 directs conversion of radial glia into basal precursors and guides neuronal amplification by indirect neurogenesis in the developing neocortex, Neuron, 60, 56, 10.1016/j.neuron.2008.09.028 · DOI
- Simpson, 2009, Variants of the elongator protein 3 (ELP3) gene are associated with motor neuron degeneration, Hum. Mol. Genet., 18, 472, 10.1093/hmg/ddn375 · DOI
- Slaugenhaupt, 2001, Tissue-specific expression of a splicing mutation in the IKBKAP gene causes familial dysautonomia, Am. J. Hum. Genet., 68, 598, 10.1086/318810 · DOI
- Songe-Møller, 2010, Mammalian ALKBH8 possesses tRNA methyltransferase activity required for the biogenesis of multiple wobble uridine modifications implicated in translational decoding, Mol. Cell. Biol., 30, 1814, 10.1128/MCB.01602-09 · DOI
- Stadler, 2011, Wobble base-pairing slows in vivo translation elongation in metazoans, RNA, 17, 2063, 10.1261/rna.02890211 · DOI
- Tuvia, 2007, The ubiquitin E3 ligase POSH regulates calcium homeostasis through spatial control of Herp, J. Cell Biol., 177, 51, 10.1083/jcb.200611036 · DOI
- Wang, 2014, The impact of the endoplasmic reticulum protein-folding environment on cancer development, Nat. Rev. Cancer, 14, 581, 10.1038/nrc3800 · DOI
- Wang, 2015, Tunicamycin-induced unfolded protein response in the developing mouse brain, Toxicol. Appl. Pharmacol., 283, 157, 10.1016/j.taap.2014.12.019 · DOI
- Winkler, 2002, Elongator is a histone H3 and H4 acetyltransferase important for normal histone acetylation levels in vivo, Proc. Natl. Acad. Sci. USA, 99, 3517, 10.1073/pnas.022042899 · DOI
- Xu, 2014, Unfolded protein response is required for the definitive endodermal specification of mouse embryonic stem cells via Smad2 and β-catenin signaling, J. Biol. Chem., 289, 26290, 10.1074/jbc.M114.572560 · DOI
- Zhang, 2013, Upregulation of sestrin 2 expression via JNK pathway activation contributes to autophagy induction in cancer cells, Cell. Signal., 25, 150, 10.1016/j.cellsig.2012.09.004 · DOI
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Self-citationDori, M., Cavalli, D., Lesche, M., Massalini, S., Alieh, L. H. A., de Toledo, B. C., Khudayberdiev, S., Schratt, G., Dahl, A., & Calegari, F. (2020) · Development · doi:10.1242/dev.190520 · Cited by 22
Metadata
- Authors
- Laguesse, S., Creppe, C., Nedialkova, D. D., Prévot, P.-P., Borgs, L., Huysseune, S., Franco, B., Duysens, G., Krusy, N., Lee, G., Thelen, N., Thiry, M., Close, P., Chariot, A., Malgrange, B., Leidel, S. A., Godin, J. D., & Nguyen, L.
- Venue
- Developmental Cell
- Publisher
- Elsevier BV
- Published
- 2015-12
- Volume
- 35
- Issue
- 5
- Pages
- 553-567
- ISSN
- 1534-5807
- Cited by
- 228
- References
- 5
- Language
- en
- Licence
- www.elsevier.com/tdm/userlicense/1.0/ (tdm)
- www.elsevier.com/legal/tdmrep-license (tdm)
- www.elsevier.com/open-access/userlicense/1.0/ (vor, 372 d)
- doi.org/10.15223/policy-017 (stm-asf)
- doi.org/10.15223/policy-037 (stm-asf)
- doi.org/10.15223/policy-012 (stm-asf)
- doi.org/10.15223/policy-029 (stm-asf)
- doi.org/10.15223/policy-004 (stm-asf)
- Funders
- Marie Curie
- EMBO long-term fellowships
- New York Stem Cell Foundation
- Maryland Stem Cell Research Funding
- Adrienne Helis Malvin Medical Research Foundation
- Max Planck Society
- North Rhine-Westphalian Ministry for Innovation, Science and Research (314-400 010 09)
- European Research Council (ERC-2012-StG 310489-tRNAmodi)
- EMBO Long-Term Fellowship (ALTF1291-2010)
- F.R.S.-F.N.R.S
- Fonds Léon Fredericq
- Fondation Médicale Reine Elisabeth
- Fondation Simone et Pierre Clerdent
- Belgian Science Policy
- ARC (ARC11/16-01)
- WELBIO
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