Clinical and cost implications of Biofire FilmArray® meningitis/encephalitis panel testing: a systematic review
Open accessAbstract
Background Meningitis and encephalitis are diseases with high case fatality rates and serious long-term sequalae. A significant percentage do not receive an aetiological diagnosis, in part due to limitations of conventional testing methods. The Biofire FilmArray® Meningitis / Encephalitis Panel (MEP) is the first commercially approved multiplex PCR panel for diagnosis of infectious meningoencephalitis. It provides rapid results and has the potential to reduce empiric antimicrobial use and length of hospitalisation when compared to conventional testing. Methods We conducted a systematic review to evaluate the impact of MEP implementation by searching the Medline and Embase databases. The outcomes of interest were duration of acyclovir treatment, duration of antimicrobials, length of stay and healthcare cost. Results A total of 23 studies satisfied the inclusion criteria, the majority of which were retrospective studies comparing cohorts before and after MEP implementation. The included studies were very heterogenous, with variation in MEP implementation strategies, standard of care diagnostics and study populations. MEP testing resulted in reduction in acyclovir use in 75 % of studies with an average reduction of 39 h (range 11-144 h). Antimicrobial use and length of stay was reduced in 44 % and 40 % of studies respectively. Five studies looked at healthcare costs, variably described between studies as hospitalisation, antimicrobial and microbiology costs. Total hospitalisatio…
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
The lack of outcome measures such as antimicrobial use or length of stay limits the ability to fully evaluate clinical and economic impact.
“The lack of outcome measures such as antimicrobial use or length of stay also limits the ability to fully evaluate clinical and economic impact.20”
From Utility and clinical relevance of multiplex PCR panels for diagnosis of central nervous system infections (2026) · cites this paper as [20]
Cites
O'Brien, K. L., Wolfson, L. J., Watt, J. P., Henkle, E., Deloria-Knoll, M., McCall, N., Lee, E., Mulholland, K., Levine, O. S., & Cherian, T. (2009) · The Lancet · doi:10.1016/s0140-6736(09)61204-6 · Cited by 2,398 · see citing works
Practice Guidelines for the Management of Bacterial Meningitis
Tunkel, A. R., Hartman, B. J., Kaplan, S. L., Kaufman, B. A., Roos, K. L., Scheld, W. M., & Whitley, R. J. (2004) · Clinical Infectious Diseases · doi:10.1086/425368 · Cited by 2,308 · see citing works
Tunkel, A. R., Glaser, C. A., Bloch, K. C., Sejvar, J. J., Marra, C. M., Roos, K. L., Hartman, B. J., Kaplan, S. L., Scheld, W. M., & Whitley, R. J. (2008) · Clinical Infectious Diseases · doi:10.1086/589747 · Cited by 1,193 · see citing works
Clinical Metagenomic Sequencing for Diagnosis of Meningitis and Encephalitis
Wilson, M. R., Sample, H. A., Zorn, K. C., Arevalo, S., Yu, G., Neuhaus, J., Federman, S., Stryke, D., Briggs, B., Langelier, C., et al. (2019) · New England Journal of Medicine · doi:10.1056/nejmoa1803396 · Cited by 1,067 · see citing works
Leber, A. L., Everhart, K., Balada-Llasat, J.-M., Cullison, J., Daly, J., Holt, S., Lephart, P., Salimnia, H., Schreckenberger, P. C., DesJarlais, S., et al. (2016) · Journal of Clinical Microbiology · doi:10.1128/jcm.00730-16 · Cited by 609 · see citing works
Solomon, T., Michael, B. D., Smith, P. E., Sanderson, F., Davies, N. W. S., Hart, I. J., Holland, M., Easton, A., Buckley, C. J., Kneen, R., et al. (2011) · Journal of Infection · doi:10.1016/j.jinf.2011.11.014 · Cited by 466 · see citing works
Acute encephalitis – diagnosis and management
Ellul, M. A., & Solomon, T. (2018) · Clinical Medicine · doi:10.7861/clinmedicine.18-2-155 · Cited by 245 · see citing works
Rhein, J., Bahr, N. C., Hemmert, A., Cloud, J. L., Bellamkonda, S. K., Oswald, C., Lo, E. Y. W., Nabeta, H. W., Kiggundu, R., Akampurira, A., et al. (2015) · Diagnostic Microbiology and Infectious Disease · doi:10.1016/j.diagmicrobio.2015.11.017 · Cited by 111 · see citing works
Vetter, P., Schibler, M., Herrmann, J. L., & Boutolleau, D. (2020) · Clinical Microbiology and Infection · doi:10.1016/j.cmi.2019.12.013 · Cited by 64 · see citing works
Broadhurst, M. J., Dujari, S., Budvytiene, I., Pinsky, B. A., Gold, C. A., & Banaei, N. (2020) · Journal of Clinical Microbiology · doi:10.1128/jcm.00311-20 · Cited by 57 · see citing works
Assessment of the FilmArray ME Panel in 4199 Consecutively Tested Cerebrospinal Fluid Samples
Lindström, J., Elfving, K., Lindh, M., Westin, J., & Studahl, M. (2022) · Clinical Microbiology and Infection · doi:10.1016/j.cmi.2021.05.017 · Cited by 48 · see citing works
Posnakoglou, L., Siahanidou, T., Syriopoulou, V., & Michos, A. (2020) · European Journal of Clinical Microbiology & Infectious Diseases · doi:10.1007/s10096-020-03986-6 · Cited by 42 · see citing works
Association of the filmarray meningitis/encephalitis panel with clinical management
Nabower, A. M., Miller, S., Biewen, B., Lyden, E., Goodrich, N., Miller, A., Gollehon, N., Skar, G., & Snowden, J. (2019) · Hospital Pediatrics · doi:10.1542/hpeds.2019-0064 · Cited by 42 · see citing works
Tarai, B., & Das, P. (2019) · Neurological Sciences · doi:10.1007/s10072-018-3584-y · Cited by 41 · see citing works
Hagen, A., Eichinger, A., Meyer-Buehn, M., Schober, T., & Huebner, J. (2020) · BMC Pediatrics · doi:10.1186/s12887-020-1944-2 · Cited by 41 · see citing works
Precit, M. R., Yee, R., Pandey, U., Fahit, M., Pool, C., Naccache, S. N., & Dien Bard, J. (2020) · Journal of Clinical Microbiology · doi:10.1128/jcm.01592-19 · Cited by 39 · see citing works
Messacar, K., Palmer, C., Gregoire, L., Elliott, A., Ackley, E., Perraillon, M. C., Tyler, K. L., & Dominguez, S. R. (2022) · The Journal of Pediatrics · doi:10.1016/j.jpeds.2022.02.002 · Cited by 34 · see citing works
Sundelin, T., Bialas, J., de Diego, J., Hermanowski, M., Leibhan, H., Ponderand, L., Juanola-Falgarona, M., Jones, T., Rey, M., Johnson, S., et al. (2023) · Journal of Clinical Microbiology · doi:10.1128/jcm.00426-23 · Cited by 33 · see citing works
O’Brien, M. P., Francis, J. R., Marr, I., & Baird, R. (2018) · The Pediatric Infectious Disease Journal · doi:10.1097/inf.0000000000001936 · Cited by 33 · see citing works
DiDiodato, G., & Bradbury, N. (2019) · Open Forum Infectious Diseases · doi:10.1093/ofid/ofz119 · Cited by 32 · see citing works
Moffa, M. A., Bremmer, D. N., Carr, D. R., Buchanan, C., Shively, N. R., Elrufay, R., & Walsh, T. (2020) · Antibiotics · doi:10.3390/antibiotics9060282 · Cited by 26 · see citing works
Evans, M., Merkel, K. G., Harder, J., & Rose, D. T. T. (2019) · Diagnostic Microbiology and Infectious Disease · doi:10.1016/j.diagmicrobio.2019.114935 · Cited by 26 · see citing works
Contribution of the BioFire® FilmArray® Meningitis/Encephalitis Panel:
Dack, K., Pankow, S., Ablah, E. A., Zackula, R., & Assi, M. (2019) · Kansas Journal of Medicine · doi:10.17161/kjm.v12i1.11695 · Cited by 26 · see citing works
Markovich, K., Wingler, M. J. B., Stover, K. R., Barber, K. E., Wagner, J. L., & Cretella, D. A. (2022) · Diseases · doi:10.3390/diseases10040110 · Cited by 22 · see citing works
Choi, J. J., Westblade, L. F., Gottesdiener, L. S., Liang, K., Li, H. A., Wehmeyer, G. T., Glesby, M. J., & Simon, M. S. (2021) · Open Forum Infectious Diseases · doi:10.1093/ofid/ofab467 · Cited by 21 · see citing works
Mina, Y., Schechner, V., Savion, M., Yahav, D., Bilavsky, E., Sorek, N., Ben-Zvi, H., & Adler, A. (2019) · BMC Infectious Diseases · doi:10.1186/s12879-019-4348-x · Cited by 20 · see citing works
Messacar, K., Gaensbauer, J. T., Birkholz, M., Palmer, C., Todd, J. K., Tyler, K. L., & Dominguez, S. R. (2020) · Diagnostic Microbiology and Infectious Disease · doi:10.1016/j.diagmicrobio.2020.115085 · Cited by 20 · see citing works
Impact of a 24/7 multiplex-PCR on the management of patients with confirmed viral meningitis
de Ponfilly, G. P., Chauvin, A., Salmona, M., Benmansour, H., Berçot, B., Caméléna, F., Courbin, V., Eyer, X., Lecorché, E., Mougari, F., et al. (2021) · Journal of Infection · doi:10.1016/j.jinf.2021.08.050 · Cited by 16 · see citing works
Diaz, K. M. O., Piedrahíta, J. A. A., Suárez-Brochero, Ó. F., Granada, D. O., Barón, L. M., Cortés-Bonilla, I., & Hasbun, R. (2020) · Epidemiology and Infection · doi:10.1017/s0950268820001648 · Cited by 13 · see citing works
Ngo Nsoga, M. T., Pérez-Rodriguez, F. J., Mamin, A., L’Huillier, A. G., Cherkaoui, A., Kaiser, L., & Schibler, M. (2023) · Microbiology Spectrum · doi:10.1128/spectrum.03179-22 · Cited by 11 · see citing works
Walker, M., Taylor, K., Beaulieu, R., Laurent, M., Hamer, D., & O'Neal, C. (2021) · The American Journal of the Medical Sciences · doi:10.1016/j.amjms.2020.09.020 · Cited by 11 · see citing works
Otake, S., Nakagawa, Y., Ryu, H., Oue, T., & Kasai, M. (2022) · Journal of Infection and Chemotherapy · doi:10.1016/j.jiac.2022.05.005 · Cited by 11 · see citing works
Executive Summary: State-of-the Art: Acute Encephalitis
Bloch, K. C., Glaser, C. A., Gaston, D. C., & Venkatesan, A. (2023) · Clinical Infectious Diseases · doi:10.1093/cid/ciad456 · Cited by 9 · see citing works
Lin, G. Y.-E., Lin, C., Chi, H., Huang, D. T., Huang, C., & Chiu, N. (2022) · Journal of Microbiology Immunology and Infection · doi:10.1016/j.jmii.2022.07.013 · Cited by 9 · see citing works
Clague, M., Kim, C. F., Zucker, J. E., Green, D. A., Sun, Y., Whittier, S., & Thakur, K. T. (2022) · Open Forum Infectious Diseases · doi:10.1093/ofid/ofac356 · Cited by 7 · see citing works
Impact of CSF Meningitis and Encephalitis Panel on Resource Use for Febrile Well-Appearing Infants
DesPain, A. W., Pearman, R., Hamdy, R. F., Campos, J. M., Badolato, G. M., & Breslin, K. A. (2022) · Hospital Pediatrics · doi:10.1542/hpeds.2021-006433 · Cited by 7 · see citing works
Berkhout, A., Cheng, D. R., McNab, S., Lee, L., Daley, A. J., & Clifford, V. (2022) · The Pediatric Infectious Disease Journal · doi:10.1097/inf.0000000000003812 · Cited by 7 · see citing works
Disse, S. C., Zapf, A., Schneble, F., Fiedler, A., Hossain, H., & Meyer, A. (2022) · Infection · doi:10.1007/s15010-022-01836-5 · Cited by 2 · see citing works
Flagged first, then by citations
Cited by
Sorted by citations
Ibrahim, N. H., Kinsella, P. M., Chan, E., Cronin, K. M., & Bond, K. A. (2026) · Internal Medicine Journal · doi:10.1111/imj.70391 · Cited by 2 · see citing works
One-pot recombinase polymerase amplification and CRISPR/Cas12a assay for Cryptococcus neoformans
Li, Z., Chen, L., Luo, J., Lu, Y., Zhang, H., & Zhao, P. (2026) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-026-13733-0 · Cited by 1 · see citing works
Chirizzi, D., Spedicato, A., Bianco, G., Lupo, L. I., Serafini, I., Pisanò, D., Orsi, M. R., Moschettini, G., Sorge, A., Bruno, R., et al. (2026) · Microorganisms · doi:10.3390/microorganisms14071574 · Cited by 1 · see citing works
Gürler, M., Karaoğlu, Ç., Yurtcu, E. E., Us, E., & Karahan, Z. C. (2026) · The Indian Journal of Medical Research · doi:10.25259/ijmr_2107_2025
Subedi, S., Harris, P. N. A., Hall, L., & Paterson, L. D. (2026) · Open Forum Infectious Diseases · doi:10.1093/ofid/ofag240
Self-citationApplication of rapid diagnostic tests in sepsis
Hashimoto, H. (2026) · Journal of the Japanese Society of Intensive Care Medicine · doi:10.3918/jsicm.33_r16
Noguchi, K., Natori, N., Akimoto, T., Hara, M., & Nakajima, H. (2026) · Journal of Nihon University Medical Association · doi:10.4264/numa.85.2_89
Galimam, S., Randall, H., Heard, S., Oze, V., & Robertson, M. (2026) · Antimicrobial Stewardship & Healthcare Epidemiology · doi:10.1017/ash.2026.10393
When Faster Diagnosis Is Not Enough: Bringing Diagnostic Stewardship into Antimicrobial Stewardship
Mezzadri, L., & Bonfanti, P. (2026) · Infezioni in Medicina · doi:10.53854/liim-3402-1
Nakahama, H., Hanada, S., Takeda, E., Takahashi, Y., Nei, Y., Mitsumura, T., Miyamoto, A., & Tamaoka, M. (2026) · Frontiers in Oncology · doi:10.3389/fonc.2026.1877315
Mahomed, S., Khan, A., & Archary, D. (2026) · Discover Viruses. · doi:10.1007/s44370-026-00051-2
Vulcănescu, D. D., Horhat, F. G., Ciortuz, C., Varga, N.-I., & Bagiu, I. C. (2026) · Medicina · doi:10.3390/medicina62081497
Agrawal, A., Shukla, D. P., Thanneeru, S. K., Sharma, P. K., Chanchlani, R., Kumar, A., Joshi, R., Singh, J., & Rukadikar, C. A. (2026) · Cureus · doi:10.7759/cureus.114618
Tasaki, K., Hara, M., Shiota, H., Ishihara, M., & Nakajima, H. (2026) · Journal of Infection and Public Health · doi:10.1016/j.jiph.2026.103353
Amplification-Free Duplex Detection of Bacteria Using Solid-State Nanopores
Guo, S., Zhu, X., Zhang, S., Yang, Z., Wang, Y., Cai, L., & Xiao, X. (2026) · ACS Sensors · doi:10.1021/acssensors.6c01962
- Authors
- Rafiei, N., Subedi, S., Harris, P. N., & Paterson, D. L.
- Affiliations
- The University of Queensland (AU)
- Corresponding author
- Rafiei, Nastaran
- Venue
- Diagnostic Microbiology and Infectious Disease
- Publisher
- Elsevier BV
- Published
- 2025-07
- Volume
- 112
- Issue
- 3
- Pages
- 116823
- ISSN
- 0732-8893 (ISSN-L)
- OpenAlex
- W4408735379
- Cited by
- 13
- References
- 38
- Citations by year
- 2026: 13
- FWCI
- 1.43
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Diagnostic Microbiology and Infectious Disease (publishedVersion, cc-by-nc-nd)
- PubMed (publishedVersion)
- Griffith Research Online (submittedVersion, cc-by-nc-nd)
- Funders
- GlaxoSmithKline Australia
- bioMérieux
- Metro North Hospital and Health Service
- Topics
- Life Sciences › Immunology and Microbiology › Microbiology › Bacterial Infections and Vaccines
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Clinical Biochemistry › Bacterial Identification and Susceptibility Testing
- Health Sciences › Medicine › Infectious Diseases › Infectious Encephalopathies and Encephalitis
- Keywords
- multiplex PCR, viral meningitis, encephalitis, etiological diagnosis, antimicrobial use, length of hospital stay, health care costs, empiric antimicrobial therapy
- MeSH terms
- Acyclovir, Encephalitis, Humans, Length of Stay, Meningitis, Health Care Costs, Molecular Diagnostic Techniques, Multiplex Polymerase Chain Reaction
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review