New insigths on the metabolic diversity among the epibiotic microbial communitiy of the hydrothermal shrimp Rimicaris exoculata.

Basic local alignment search tool

Altschul, S. F., Gish, W., Miller, W., Myers, E. W., & Lipman, D. J. (1990) · Journal of Molecular Biology · doi:10.1006/jmbi.1990.9999 · Cited by 98,669 · see citing works

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

Thompson, J. D., Higgins, D. G., & Gibson, T. J. (1994) · Nucleic Acids Research · doi:10.1093/nar/22.22.4673 · Cited by 64,617 · see citing works

The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Saitou, N., & Nei, M. (1987) · Molecular Biology and Evolution · doi:10.1093/oxfordjournals.molbev.a040454 · Cited by 59,962 · see citing works

CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP

Felsenstein, J. (1985) · Evolution · doi:10.1111/j.1558-5646.1985.tb00420.x · Cited by 44,735 · see citing works

Confidence Limits on Phylogenies: An Approach Using the Bootstrap

Felsenstein, J. (1985) · Evolution · doi:10.2307/2408678 · Cited by 19,371 · see citing works

Occurrence, metabolism, metabolic role, and industrial uses of bacterial polyhydroxyalkanoates

Anderson, A. J., & DAWES, E. A. (1990) · Microbiological Reviews · doi:10.1128/mr.54.4.450-472.1990 · Cited by 2,917 · see citing works

SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny

Galtier, N., Gouy, M., & Gautier, C. (1996) · Computer applications in the biosciences · doi:10.1093/bioinformatics/12.6.543 · Cited by 2,264 · see citing works

Isolation and characterization

Turksen, K. (2006) · Humana Press eBooks · Cited by 2,082 · see citing works

An off-axis hydrothermal vent field near the Mid-Atlantic Ridge at 30° N

Party, T. A.-6. S., Kelley, D. S., Karson, J. A., Blackman, D. K., Früh-Green, G. L., Butterfield, D. A., Lilley, M. D., Olson, E. J., Schrenk, M. O., Roe, K. K., et al. (2001) · Nature · doi:10.1038/35084000 · Cited by 1,168 · see citing works

Geochemistry of high H2 and CH4 vent fluids issuing from ultramafic rocks at the Rainbow hydrothermal field (36°14′N, MAR)

Charlou, J., Donval, J., Fouquet, Y., Jean‐Baptiste, P., & Holm, N. G. (2002) · Chemical Geology · doi:10.1016/s0009-2541(02)00134-1 · Cited by 909 · see citing works

The rainbow vent fluids (36°14′N, MAR): the influence of ultramafic rocks and phase separation on trace metal content in Mid-Atlantic Ridge hydrothermal fluids

Douville, É., Charlou, J., Oelkers, É. H., Bienvenu, P., Colon, C. F. J., Donval, J., Fouquet, Y., Prieur, D., & Appriou, P. (2002) · Chemical Geology · doi:10.1016/s0009-2541(01)00351-5 · Cited by 701 · see citing works

Inorganic polyphosphate: toward making a forgotten polymer unforgettable

Kornberg, A. (1995) · Journal of Bacteriology · doi:10.1128/jb.177.3.491-496.1995 · Cited by 583 · see citing works

Chemistry of hot springs on the Mid-Atlantic Ridge

Campbell, A. C., Palmer, M. R., Klinkhammer, G. P., Bowers, T. S., Edmond, J. M., Lawrence, J. R., Casey, J., Thompson, G., Humphris, S. E., Rona, P. A., et al. (1988) · Nature · doi:10.1038/335514a0 · Cited by 451 · see citing works

Methane- and Sulfur-Metabolizing Microbial Communities Dominate the Lost City Hydrothermal Field Ecosystem

Brazelton, W. J., Schrenk, M. O., Kelley, D. S., & Baross, J. A. (2006) · Applied and Environmental Microbiology · doi:10.1128/aem.00574-06 · Cited by 404 · see citing works

Isolation and Characterization of Novel Psychrophilic, Neutrophilic, Fe-Oxidizing, Chemolithoautotrophic α- and γ- Proteobacteria from the Deep Sea

Edwards, K. J., Rogers, D. R., Wirsen, C. O., & McCollom, T. M. (2003) · Applied and Environmental Microbiology · doi:10.1128/aem.69.5.2906-2913.2003 · Cited by 355 · see citing works

Variations in deep-sea hydrothermal vent communities on the Mid-Atlantic Ridge near the Azores plateau

Desbruyères, D., Biscoito, M., Caprais, J., Colaço, A., Comtet, T., Crassous, P., Fouquet, Y., Khripounoff, A., Bris, N. L., Olu, K., et al. (2001) · Deep Sea Research Part I Oceanographic Research Papers · doi:10.1016/s0967-0637(00)00083-2 · Cited by 302 · see citing works

Inclusion Bodies of Prokaryotes

Shively, J. (1974) · Annual Review of Microbiology · doi:10.1146/annurev.mi.28.100174.001123 · Cited by 284 · see citing works

Dominance of one bacterial phylotype at a Mid-Atlantic Ridge hydrothermal vent site.

Polz, M. F., & Cavanaugh, C. M. (1995) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.92.16.7232 · Cited by 217 · see citing works

Phylogenetic Analysis Reveals Multiple Lateral Transfers of Adenosine-5′-Phosphosulfate Reductase Genes among Sulfate-Reducing Microorganisms

Friedrich, M. W. (2002) · Journal of Bacteriology · doi:10.1128/jb.184.1.278-289.2002 · Cited by 186 · see citing works

Isolation and Characterization ofposMutants Defective in Correct Positioning of Septum in Schizosaccharomyces pombe

Edamatsu, M., & Toyoshima, Y. Y. (1996) · ZOOLOGICAL SCIENCE · doi:10.2108/zsj.13.235 · Cited by 181 · see citing works

Dual Symbiosis in a Bathymodiolus sp. Mussel from a Methane Seep on the Gabon Continental Margin (Southeast Atlantic): 16S rRNA Phylogeny and Distribution of the Symbionts in Gills

Duperron, S., Nadalig, T., Caprais, J., Sibuet, M., Fiala‐Médioni, A., Amann, R., & Dubilier, N. (2005) · Applied and Environmental Microbiology · doi:10.1128/aem.71.4.1694-1700.2005 · Cited by 179 · see citing works

Identification of a new class of biopolymer: bacterial synthesis of a sulfur-containing polymer with thioester linkages

Lütke‐Eversloh, T., Steinbüchel, A., Luftmann, H., & Bergander, K. (2001) · Microbiology · doi:10.1099/00221287-147-1-11 · Cited by 169 · see citing works

Feeding biology of the shrimp Rimicaris exoculata at hydrothermal vents on the Mid-Atlantic Ridge

Dover, C. L. V., Fry, B., Grassle, J. F., Humphris, S. E., & Rona, P. A. (1988) · Marine Biology · doi:10.1007/bf00391196 · Cited by 160 · see citing works

Molecular Analysis of the Diversity of Sulfate-Reducing and Sulfur-Oxidizing Prokaryotes in the Environment, Using aprA as Functional Marker Gene

Meyer, B., & Kuever, J. (2007) · Applied and Environmental Microbiology · doi:10.1128/aem.01272-07 · Cited by 158 · see citing works

Novel Forms of Structural Integration between Microbes and a Hydrothermal Vent Gastropod from the Indian Ocean

Goffredi, S. K., Warén, A., Orphan, V. J., Dover, C. L. V., & Vrijenhoek, R. C. (2004) · Applied and Environmental Microbiology · doi:10.1128/aem.70.5.3082-3090.2004 · Cited by 158 · see citing works

Chemosynthetic microbial activity at Mid‐Atlantic Ridge hydrothermal vent sites

Wirsen, C. O., Jannasch, H. W., & Molyneaux, S. J. (1993) · Journal of Geophysical Research Atmospheres · doi:10.1029/92jb01556 · Cited by 145 · see citing works

TWO NEW CARIDEAN SHRIMPS (BRESILIIDAE) FROM A HYDROTHERMAL FIELD ON THE MID-ATLANTIC RIDGE

Williams, A. B., & Rona, P. A. (1986) · Journal of Crustacean Biology · doi:10.1163/193724086x00299 · Cited by 140 · see citing works

Elemental sulfur in the gills of three species of clams containing chemoautotrophic symbiotic bacteria: a possible inorganic energy storage compound

Vetter, R. D. (1985) · Marine Biology · doi:10.1007/bf00393041 · Cited by 133 · see citing works

Two New Caridean Shrimps (Bresiliidae) from a Hydrothermal Field on the Mid-Atlantic Ridge

Williams, A. B., & Rona, P. A. (1986) · Journal of Crustacean Biology · doi:10.2307/1548184 · Cited by 129 · see citing works

Unexpected co‐occurrence of six bacterial symbionts in the gills of the cold seep mussel Idas sp. (Bivalvia: Mytilidae)

Duperron, S., Halary, S., Lorion, J., Sibuet, M., & Gaill, F. (2007) · Environmental Microbiology · doi:10.1111/j.1462-2920.2007.01465.x · Cited by 123 · see citing works

Coexistence of Bacterial Sulfide Oxidizers, Sulfate Reducers, and Spirochetes in a Gutless Worm (Oligochaeta) from the Peru Margin

Blazejak, A., Erséus, C., Amann, R., & Dubilier, N. (2005) · Applied and Environmental Microbiology · doi:10.1128/aem.71.3.1553-1561.2005 · Cited by 112 · see citing works

Novel Chemoautotrophic Endosymbiosis between a Member of the Epsilonproteobacteria and the Hydrothermal-Vent Gastropod Alviniconcha aff. hessleri (Gastropoda: Provannidae) from the Indian Ocean

Suzuki, Y., Sasaki, T., Suzuki, M., Nogi, Y., Miwa, T., Takai, K., Nealson, K. H., & Horikoshi, K. (2005) · Applied and Environmental Microbiology · doi:10.1128/aem.71.9.5440-5450.2005 · Cited by 110 · see citing works

Trophic ecology of massive shrimp aggregations at a Mid‐Atlantic Ridge hydrothermal vent site

Polz, M. F., Robinson, J. J., Cavanaugh, C. M., & Dover, C. L. V. (1998) · Limnology and Oceanography · doi:10.4319/lo.1998.43.7.1631 · Cited by 109 · see citing works

Heat-shock response and temperature resistance in the deep-sea vent shrimp Rimicaris exoculata

Ravaux, J., Gaill, F., Bris, N. L., Sarradin, P., Jollivet, D., & Shillito, B. (2003) · Journal of Experimental Biology · doi:10.1242/jeb.00419 · Cited by 106 · see citing works

Early steps in microbial colonization processes at deep‐sea hydrothermal vents

Alain, K., Zbinden, M., Bris, N. L., Lesongeur, F., Quérellou, J., Gaill, F., & Cambon‐Bonavita, M. (2004) · Environmental Microbiology · doi:10.1111/j.1462-2920.2003.00557.x · Cited by 104 · see citing works

Phylogenetic characterization of the bacterial assemblage associated with mucous secretions of the hydrothermal vent polychaete Paralvinella palmiformis

Alain, K., Olagnon, M., Desbruyères, D., Pagé, A., Barbier, G., Juniper, S. K., Quérellou, J., & Cambon‐Bonavita, M. (2002) · FEMS Microbiology Ecology · doi:10.1111/j.1574-6941.2002.tb01035.x · Cited by 102 · see citing works

Occurrence of Deferribacterales and Entomoplasmatales in the deep-sea Alvinocarid shrimp Rimicaris exoculata gut.

Zbinden, M., & Cambon-Bonavita, M.-A. (2003) · FEMS Microbiology Ecology · doi:10.1016/s0168-6496(03)00176-4 · Cited by 101 · see citing works

Wide bacterial diversity associated with tubes of the vent worm Riftia pachyptila

López‐García, P., Gaill, F., & Moreira, D. (2002) · Environmental Microbiology · doi:10.1046/j.1462-2920.2002.00286.x · Cited by 100 · see citing works

Temperature resistance of Hesiolyra bergi, a polychaetous annelid living on deep-sea vent smoker walls

Shillito, B., Jollivet, D., Sarradin, P., Rodier, P., Lallier, F. H., Desbruyères, D., & Gaill, F. (2001) · Marine Ecology Progress Series · doi:10.3354/meps216141 · Cited by 99 · see citing works

Distribution of bacteria and associated minerals in the gill chamber of the vent shrimp Rimicaris exoculata and related biogeochemical processes.

Zbinden, M., Le Bris, N., Gaill, F., & Compère, P. (2004) · Marine Ecology Progress Series · doi:10.3354/meps284237 · Cited by 95 · see citing works

Occurrence of 16:2(n-4) and 18:2(n-4) fatty acids in the lipids of the hydrothermal vent shrimps Rimicaris exoculata and Alvinocaris markensis: nutritional and trophic implications

Pond, D., Dixon, D., Bell, M., Fallick, A. E., & Sargent, J. (1997) · Marine Ecology Progress Series · doi:10.3354/meps156167 · Cited by 91 · see citing works

Characterization of Symbiont Populations in Life-History Stages of Mussels From Chemosynthetic Environments

Salerno, J. L., Macko, S. A., Hallam, S. J., Bright, M., Won, Y., McKiness, Z. P., & Dover, C. L. V. (2005) · Biological Bulletin · doi:10.2307/3593123 · Cited by 83 · see citing works

Evidence for chemoautotrophic symbiosis in a Mediterranean cold seep clam (Bivalvia: Lucinidae): comparative sequence analysis of bacterial 16S rRNA, APS reductase and RubisCO genes

Duperron, S., Fiala‐Médioni, A., Caprais, J., Olu, K., & Sibuet, M. (2006) · FEMS Microbiology Ecology · doi:10.1111/j.1574-6941.2006.00194.x · Cited by 81 · see citing works

Feeding specialization of bresiliid shrimps in the TAG site hydrothermal community

Gebruk, A., Pimenov, N., & Sawichev, A. (1993) · Marine Ecology Progress Series · doi:10.3354/meps098247 · Cited by 70 · see citing works

Trophic ecology of Rimicaris exoculata : a combined lipid abundance/stable isotope approach

Rieley, G., Dover, C. L. V., Hedrick, D. B., & Eglinton, G. (1999) · Marine Biology · doi:10.1007/s002270050489 · Cited by 62 · see citing works

Untitled work

(1993) · Institutional Archive of Ifremer (French Research Institute for Exploitation of the Sea) · Cited by 61 · see citing works

Geochemical energy sources for microbial primary production in the environment of hydrothermal vent shrimps

Schmidt, C., Vuillemin, R., Gall, C., Gaill, F., & Bris, N. L. (2007) · Marine Chemistry · doi:10.1016/j.marchem.2007.09.009 · Cited by 52 · see citing works

Elemental characterization of microorganism granules by EFTEM in the tube wall of a deep‐sea vent invertebrate

Lechaire, J. P., Shillito, B., Frébourg, G., & Gaill, F. (2002) · Biology of the Cell · doi:10.1016/s0248-4900(02)01199-1 · Cited by 29 · see citing works

Elemental Characterization of Daphnia Resting Eggs by X-ray Analytical Microscopy

Kawasaki, T., Sakata, M., & Namiki, H. (2004) · ZOOLOGICAL SCIENCE · doi:10.2108/zsj.21.1019 · Cited by 18 · see citing works

In situ localization of sulphur in the thioautotrophic symbiotic model Lucina pectinata (Gmelin, 1791) by cryo‐EFTEM microanalysis

Lechaire, J. P., Frébourg, G., Gaill, F., & Gros, O. (2006) · Biology of the Cell · doi:10.1042/bc20040502 · Cited by 17 · see citing works

Symbiotic diversity in marine animals: the art of harnessing chemosynthesis

Dubilier, N., Bergin, C., & Lott, C. (2008) · Nature Reviews Microbiology · doi:10.1038/nrmicro1992 · Cited by 1,073 · see citing works

Diversity and Habitat Preferences of Cultivated and Uncultivated Aerobic Methanotrophic Bacteria Evaluated Based on pmoA as Molecular Marker

Knief, C. (2015) · Frontiers in Microbiology · doi:10.3389/fmicb.2015.01346 · Cited by 598 · see citing works

Ultragentle manipulation of delicate structures using a soft robotic gripper

Sinatra, N. R., Teeple, C. B., Vogt, D. M., Parker, K. K., Gruber, D. F., & Wood, R. J. (2019) · Science Robotics · doi:10.1126/scirobotics.aax5425 · Cited by 363 · see citing works

Biotic Interactions in Microbial Communities as Modulators of Biogeochemical Processes: Methanotrophy as a Model System

Ho, A., Angel, R., Veraart, A. J., Daebeler, A., Jia, Z., Kim, S.-Y., Kerckhof, F., Boon, N., & Bodelier, P. L. E. (2016) · Frontiers in Microbiology · doi:10.3389/fmicb.2016.01285 · Cited by 135 · see citing works

Inorganic carbon fixation by chemosynthetic ectosymbionts and nutritional transfers to the hydrothermal vent host-shrimp <i>Rimicaris exoculata</i>

Ponsard, J., Cambon-Bonavita, M.-A., Zbinden, M., Lepoint, G., Joassin, A., Corbari, L., Shillito, B., Durand, L., Cueff-Gauchard, V., & Compère, P. (2013) · The ISME Journal · doi:10.1038/ismej.2012.87 · Cited by 110 · see citing works

Dual symbiosis of the vent shrimp <i>Rimicaris exoculata</i> with filamentous gamma‐ and epsilonproteobacteria at four Mid‐Atlantic Ridge hydrothermal vent fields

Petersen, J. M., Ramette, A., Lott, C., Cambon‐Bonavita, M., Zbinden, M., & Dubilier, N. (2010) · Environmental Microbiology · doi:10.1111/j.1462-2920.2009.02129.x · Cited by 107 · see citing works

Microbial diversity associated with the hydrothermal shrimp<i>Rimicaris exoculata</i>gut and occurrence of a resident microbial community

Durand, L., Zbinden, M., Cueff-Gauchard, V., Duperron, S., Roussel, E. G., Shillito, B., & Cambon-Bonavita, M.-A. (2010) · FEMS Microbiology Ecology · doi:10.1111/j.1574-6941.2009.00806.x · Cited by 100 · see citing works

Acquisition of epibiotic bacteria along the life cycle of the hydrothermal shrimp <i>Rimicaris exoculata</i>

Guri, M., Durand, L., Cueff-Gauchard, V., Zbinden, M., Crassous, P., Shillito, B., & Cambon-Bonavita, M.-A. (2012) · The ISME Journal · doi:10.1038/ismej.2011.133 · Cited by 87 · see citing works

The Diversity of Deep-Sea Mussels and Their Bacterial Symbioses

Duperron, S. (2010) · Topics in geobiology · doi:10.1007/978-90-481-9572-5_6 · Cited by 87 · see citing works

Functional genes as markers for sulfur cycling and CO2 fixation in microbial communities of hydrothermal vents of the Logatchev field

Hügler, M., Gärtner, A., & Imhoff, J. F. (2010) · FEMS Microbiology Ecology · doi:10.1111/j.1574-6941.2010.00919.x · Cited by 86 · see citing works

Are spatial variations in the diets of hydrothermal fauna linked to local environmental conditions?

de Busserolles, F., Sarrazin, J., Gauthier, O., Gélinas, Y., Fabri, M.-C., Sarradin, P., & Desbruyères, D. (2009) · Deep Sea Research Part II Topical Studies in Oceanography · doi:10.1016/j.dsr2.2009.05.011 · Cited by 85 · see citing works

The gill chamber epibiosis of deep‐sea shrimp <scp> <i>R</i> </scp> <i>imicaris</i> <i>exoculata</i> : an in‐depth metagenomic investigation and discovery of <scp> <i>Z</i> </scp> <i>etaproteobacteria</i>

Jan, C., Petersen, J. M., Werner, J., Teeling, H., Huang, S., Glöckner, F. O., Golyshina, O. V., Dubilier, N., Golyshin, P. N., Jebbar, M., et al. (2014) · Environmental Microbiology · doi:10.1111/1462-2920.12406 · Cited by 83 · see citing works

Pathways of carbon and energy metabolism of the epibiotic community associated with the deep-sea hydrothermal vent shrimp Rimicaris exoculata.

Hügler, M., Petersen, J. M., Dubilier, N., Imhoff, J. F., & Sievert, S. M. (2011) · PLoS ONE · doi:10.1371/journal.pone.0016018 · Cited by 80 · see citing works

Genetics and Evolution of Deep-Sea Chemosynthetic Bacteria and Their Invertebrate Hosts

Vrijenhoek, R. C. (2010) · Topics in geobiology · doi:10.1007/978-90-481-9572-5_2 · Cited by 77 · see citing works

Diversity and function in microbial mats from the Lucky Strike hydrothermal vent field

Crépeau, V., Cambon‐Bonavita, M., Lesongeur, F., Randrianalivelo, H., Sarradin, P., Sarrazin, J., & Godfroy, A. (2011) · FEMS Microbiology Ecology · doi:10.1111/j.1574-6941.2011.01070.x · Cited by 74 · see citing works

Diversity and Function of Epibiotic Microbial Communities on the Galatheid Crab, Shinkaia crosnieri

Watsuji, T., Nakagawa, S., Tsuchida, S., Toki, T., Hirota, A., Tsunogai, U., & Takai, K. (2010) · Microbes and Environments · doi:10.1264/jsme2.me10135 · Cited by 69 · see citing works

Iron oxide deposits associated with the ectosymbiotic bacteria in the hydrothermal vent shrimp Rimicaris exoculata

Corbari, L., Cambon‐Bonavita, M., Long, G. J., Grandjean, F., Zbinden, M., Gaill, F., & Compère, P. (2008) · Biogeosciences · doi:10.5194/bg-5-1295-2008 · Cited by 65 · see citing works

Novel hydrocarbon monooxygenase genes in the metatranscriptome of a natural deep‐sea hydrocarbon plume

Li, M., Jain, S., Baker, B. J., Taylor, C., & Dick, G. J. (2013) · Environmental Microbiology · doi:10.1111/1462-2920.12182 · Cited by 61 · see citing works

Identifying future sea turtle conservation areas under climate change

Butt, N., Whiting, S. D., & Dethmers, K. (2016) · Biological Conservation · doi:10.1016/j.biocon.2016.10.012 · Cited by 58 · see citing works

Comparison of microbial communities associated with three Atlantic ultramafic hydrothermal systems

Roussel, E. G., Konn, C., Charlou, J., Donval, J., Fouquet, Y., Quérellou, J., Prieur, D., & Cambon‐Bonavita, M. (2011) · FEMS Microbiology Ecology · doi:10.1111/j.1574-6941.2011.01161.x · Cited by 56 · see citing works

Identification and Characterization of Carboxyl Esterases of Gill Chamber-Associated Microbiota in the Deep-Sea Shrimp Rimicaris exoculata by Using Functional Metagenomics

Alcaide, M. M., Tchigvintsev, A., Martínez‐Martínez, M., Popovic, A., Reva, O. N., Lafraya, Á., Bargiela, R., Nechitaylo, T. Y., Matesanz, R., Cambon‐Bonavita, M., et al. (2015) · Applied and Environmental Microbiology · doi:10.1128/aem.03387-14 · Cited by 50 · see citing works

Development of an ecotoxicological protocol for the deep-sea fauna using the hydrothermal vent shrimp Rimicaris exoculata

Auguste, M., Mestre, N. C., Rocha, T. L., Cardoso, C., Cueff‐Gauchard, V., Bloa, S. L., Cambon‐Bonavita, M., Shillito, B., Zbinden, M., Ravaux, J., et al. (2016) · Aquatic Toxicology · doi:10.1016/j.aquatox.2016.03.024 · Cited by 48 · see citing works

Diversity and methane oxidation of active epibiotic methanotrophs on live Shinkaia crosnieri

Watsuji, T., Yamamoto, A., Takaki, Y., Uéda, K., Kawagucci, S., & Takai, K. (2014) · The ISME Journal · doi:10.1038/ismej.2013.226 · Cited by 46 · see citing works

Free‐living bacterial communities associated with tubeworm ( R idgeia piscesae) aggregations in contrasting diffuse flow hydrothermal vent habitats at the Main Endeavour Field, Juan de Fuca Ridge

Forget, N. L., & Juniper, S. K. (2013) · MicrobiologyOpen · doi:10.1002/mbo3.70 · Cited by 45 · see citing works

Hydrothermal systems: A decade of discovery in slow spreading environments

Kelley, D. S., & Shank, T. M. (2010) · Geophysical monograph · doi:10.1029/2010gm000945 · Cited by 42 · see citing works

Rimicaris exoculata: biology and ecology of a shrimp from deep-sea hydrothermal vents associated with ectosymbiotic bacteria

Zbinden, M., & Cambon‐Bonavita, M. (2020) · Marine Ecology Progress Series · doi:10.3354/meps13467 · Cited by 38 · see citing works

Characterization of marine microbial communities around an Arctic seabed hydrocarbon seep at Scott Inlet, Baffin Bay

Cramm, M. A., Neves, B. D. M., Manning, C. C. M., Oldenburg, T. B. P., Archambault, P., Chakraborty, A., Cyr-Parent, A., Edinger, E., Jaggi, A., Mort, A., et al. (2020) · The Science of The Total Environment · doi:10.1016/j.scitotenv.2020.143961 · Cited by 39 · see citing works

Epsilonproteobacteria as gill epibionts of the hydrothermal vent gastropod Cyathermia naticoides (North East-Pacific Rise)

Zbinden, M., Marqué, L., Gaudron, S. M., Ravaux, J., Léger, N., & Duperron, S. (2014) · Marine Biology · doi:10.1007/s00227-014-2591-7 · Cited by 38 · see citing works

Bacteria Associated with Benthic Invertebrates from Extreme Marine Environments: Promising but Underexplored Sources of Biotechnologically Relevant Molecules

Giudice, A. L., & Rizzo, C. (2022) · Marine Drugs · doi:10.3390/md20100617 · Cited by 37 · see citing works

Ontogenetic variation in epibiont community structure in the deep‐sea yeti crab,Kiwa puravida: convergence among crustaceans

Goffredi, S. K., Gregory, A., Jones, W. J., Morella, N. M., & Sakamoto, R. I. (2013) · Molecular Ecology · doi:10.1111/mec.12439 · Cited by 34 · see citing works

Is It First the Egg or the Shrimp? – Diversity and Variation in Microbial Communities Colonizing Broods of the Vent Shrimp Rimicaris exoculata During Embryonic Development

Methou, P., Hernández-Ávila, I., Aube, J., Cueff-Gauchard, V., Gayet, N., Amand, L., Shillito, B., Pradillon, F., & Cambon-Bonavita, M.-A. (2019) · Frontiers in Microbiology · doi:10.3389/fmicb.2019.00808 · Cited by 30 · see citing works

Antimicrobial Peptides and Ectosymbiotic Relationships: Involvement of a Novel Type IIa Crustin in the Life Cycle of a Deep-Sea Vent Shrimp

Le Bloa, S., Boidin-Wichlacz, C., Cueff-Gauchard, V., Rosa, R. D., Cuvillier-Hot, V., Durand, L., Methou, P., Pradillon, F., Cambon-Bonavita, M.-A., & Tasiemski, A. (2020) · Frontiers in Immunology · doi:10.3389/fimmu.2020.01511 · Cited by 30 · see citing works

Biogeographical distribution of<i>Rimicaris exoculata</i>resident gut epibiont communities along the Mid-Atlantic Ridge hydrothermal vent sites

Durand, L., Roumagnac, M., Cueff-Gauchard, V., Jan, C., Guri, M., Tessier, C., Haond, M., Crassous, P., Zbinden, M., Arnaud-Haond, S., et al. (2015) · FEMS Microbiology Ecology · doi:10.1093/femsec/fiv101 · Cited by 32 · see citing works

LTR-Retrotransposons in R. exoculata and Other Crustaceans: The Outstanding Success of GalEa-Like Copia Elements

Piednoël, M., Donnart, T., Esnault, C., Graça, P., Higuet, D., & Bonnivard, É. (2013) · PLoS ONE · doi:10.1371/journal.pone.0057675 · Cited by 31 · see citing works

Chemosynthetic ectosymbionts associated with a shallow-water marine nematode

Bellec, L., Cambon‐Bonavita, M., Hourdez, S., Jebbar, M., Tasiemski, A., Durand, L., Gayet, N., & Zeppilli, D. (2019) · Scientific Reports · doi:10.1038/s41598-019-43517-8 · Cited by 31 · see citing works

Niche partitioning in the Rimicaris exoculata holobiont: the case of the first symbiotic Zetaproteobacteria

Cambon‐Bonavita, M., Aubé, J., Cueff‐Gauchard, V., & Réveillaud, J. (2021) · Microbiome · doi:10.1186/s40168-021-01045-6 · Cited by 31 · see citing works

Cutting through the smoke: the diversity of microorganisms in deep-sea hydrothermal plumes

Djurhuus, A., Mikalsen, S., Giebel, H., & Rogers, A. D. (2017) · Royal Society Open Science · doi:10.1098/rsos.160829 · Cited by 29 · see citing works

A Nematode of the Mid-Atlantic Ridge Hydrothermal Vents Harbors a Possible Symbiotic Relationship

Bellec, L., Cambon‐Bonavita, M., Cueff‐Gauchard, V., Durand, L., Gayet, N., & Zeppilli, D. (2018) · Frontiers in Microbiology · doi:10.3389/fmicb.2018.02246 · Cited by 29 · see citing works

Gill chamber and gut microbial communities of the hydrothermal shrimp Rimicaris chacei Williams and Rona 1986: A possible symbiosis

Apremont, V., Cambon‐Bonavita, M., Cueff‐Gauchard, V., François, D., Pradillon, F., Corbari, L., & Zbinden, M. (2018) · PLoS ONE · doi:10.1371/journal.pone.0206084 · Cited by 29 · see citing works

The IPOCAMP Pressure Incubator for Deep-Sea Fauna

Shillito, B., Gaill, F., & Ravaux, J. (2014) · Journal of Marine Science and Technology · doi:10.6119/jmst-013-0718-3 · Cited by 29 · see citing works

Bacterial Community Associated with Organs of Shallow Hydrothermal Vent Crab Xenograpsus testudinatus near Kuishan Island, Taiwan

Yang, S., Chiang, P., Hsu, T.-C., Kao, S., & Tang, S. (2016) · PLoS ONE · doi:10.1371/journal.pone.0150597 · Cited by 28 · see citing works

Comparative Study of Chemosensory Organs of Shrimp From Hydrothermal Vent and Coastal Environments

Zbinden, M., Berthod, C., Montagné, N., Machon, J., Léger, N., Chertemps, T., Rabet, N., Shillito, B., & Ravaux, J. (2017) · Chemical Senses · doi:10.1093/chemse/bjx007 · Cited by 27 · see citing works

Diversity and characterization of bacterial communities of five co‐occurring species at a hydrothermal vent on the Tonga Arc

Lee, W., Juniper, S. K., Perez, M., Ju, S., & Kim, S. (2021) · Ecology and Evolution · doi:10.1002/ece3.7343 · Cited by 23 · see citing works

Cell-Specific Thioautotrophic Productivity of Epsilon-Proteobacterial Epibionts Associated with Shinkaia crosnieri

Watsuji, T., Nishizawa, M., Morono, Y., Hirayama, H., Kawagucci, S., Takahata, N., Sano, Y., & Takai, K. (2012) · PLoS ONE · doi:10.1371/journal.pone.0046282 · Cited by 25 · see citing works

Neuroanatomy of a hydrothermal vent shrimp provides insights into the evolution of crustacean integrative brain centers

Machon, J., Krieger, J., Meth, R., Zbinden, M., Ravaux, J., Montagné, N., Chertemps, T., & Harzsch, S. (2019) · eLife · doi:10.7554/elife.47550 · Cited by 24 · see citing works

Chemosynthetic communities and biogeochemical energy pathways along the Mid-Atlantic Ridge: The case of Bathymodiolus azoricus

Bris, N. L., & Duperron, S. (2010) · Geophysical monograph · doi:10.1029/2008gm000712 · Cited by 25 · see citing works

“ Candidatus Desulfobulbus rimicarensis,” an Uncultivated Deltaproteobacterial Epibiont from the Deep-Sea Hydrothermal Vent Shrimp Rimicaris exoculata

Jiang, L., Liu, X., Dong, C., Huang, Z., Cambon‐Bonavita, M., Alain, K., Gu, L., Wang, S., & Shao, Z. (2020) · Applied and Environmental Microbiology · doi:10.1128/aem.02549-19 · Cited by 23 · see citing works

Structure and Connectivity of Hydrothermal Vent Communities Along the Mid-Ocean Ridges in the West Indian Ocean: A Review

Perez, M., Sun, J., Xu, Q., & Qian, P. (2021) · Frontiers in Marine Science · doi:10.3389/fmars.2021.744874 · Cited by 20 · see citing works

Metabolism Interactions Promote the Overall Functioning of the Episymbiotic Chemosynthetic Community of Shinkaia crosnieri of Cold Seeps

Xu, Z., Wang, M., Zhang, H., He, W., Cao, L., Lian, C., Zhong, Z., Wang, H., Fu, L., Zhang, X., et al. (2022) · mSystems · doi:10.1128/msystems.00320-22 · Cited by 20 · see citing works

Comparison of Chemoreceptive Abilities of the Hydrothermal Shrimp Mirocaris fortunata and the Coastal Shrimp Palaemon elegans

Machon, J., Lucas, P., Ravaux, J., & Zbinden, M. (2018) · Chemical Senses · doi:10.1093/chemse/bjy041 · Cited by 19 · see citing works

First Comparative Analysis of the Community Structures and Carbon Metabolic Pathways of the Bacteria Associated with Alvinocaris longirostris in a Hydrothermal Vent of Okinawa Trough

Sun, Q.-L., Zeng, Z., Chen, S., & Sun, L. (2016) · PLoS ONE · doi:10.1371/journal.pone.0154359 · Cited by 18 · see citing works

Biotic and abiotic controls on iron oxyhydroxide formation in the gill chamber of the hydrothermal vent shrimp Rimicaris exoculata

Schmidt, C., Corbari, L., Gaill, F., & Bris, N. L. (2009) · Geobiology · doi:10.1111/j.1472-4669.2009.00209.x · Cited by 18 · see citing works

Investigation of bacterial communities within the digestive organs of the hydrothermal vent shrimp Rimicaris exoculata provide insights into holobiont geographic clustering.

Cowart, D. A., Durand, L., Cambon-Bonavita, M.-A., & Arnaud-Haond, S. (2017) · PLoS ONE · doi:10.1371/journal.pone.0172543 · Cited by 17 · see citing works

Comparative Analysis of Intestinal Microflora Between Two Developmental Stages of Rimicaris kairei, a Hydrothermal Shrimp From the Central Indian Ridge

Qi, L., Lian, C., Zhu, F.-C., Shi, M., & He, L. (2022) · Frontiers in Microbiology · doi:10.3389/fmicb.2021.802888 · Cited by 17 · see citing works

Shallow-water hydrothermal vent system as an extreme proxy for discovery of microbiome significance in a crustacean holobiont

Chiu, L., Wang, M., Tseng, K.-Y., Wei, C., Lin, H., Yang, S., & Tseng, Y. (2022) · Frontiers in Marine Science · doi:10.3389/fmars.2022.976255 · Cited by 17 · see citing works

New digestive symbiosis in the hydrothermal vent amphipoda Ventiella sulfuris

Corbari, L., Durand, L., Cambon‐Bonavita, M., Gaill, F., & Compère, P. (2012) · Comptes Rendus Biologies · doi:10.1016/j.crvi.2011.12.005 · Cited by 16 · see citing works

Full-length 16S rRNA amplicon sequencing reveals the variation of epibiotic microbiota associated with two shrimp species of Alvinocarididae: possibly co-determined by environmental heterogeneity and specific recognition of hosts

Hui, M., Wang, A., Cheng, J., & Sha, Z. (2022) · PeerJ · doi:10.7717/peerj.13758 · Cited by 16 · see citing works

Arthropods host intracellular chemosynthetic symbionts, too: cave study reveals an unusual form of symbiosis

Pakes, M. J., Mejía‐Ortíz, L. M., & Weiss, A. K. (2014) · Journal of Crustacean Biology · doi:10.1163/1937240x-00002238 · Cited by 15 · see citing works

Phylogenetic relationship between symbionts of tubeworm Lamellibrachia satsuma and the sediment microbial community in Kagoshima Bay

Patra, A. K., Cho, H. H., Kwon, Y. M., Kwon, K. K., Sato, T., Kato, C., Kang, S. G., & Kim, S. (2016) · Ocean Science Journal · doi:10.1007/s12601-016-0028-6 · Cited by 15 · see citing works

Direct Image-Based Correlative Microscopy Technique for Coupling Identification and Structural Investigation of Bacterial Symbionts Associated with Metazoans

Halary, S., Duperron, S., & Boudier, T. (2011) · Applied and Environmental Microbiology · doi:10.1128/aem.02461-10 · Cited by 14 · see citing works

Microbial epibiotic community of the deep-sea galatheid squat lobster Munidopsis alvisca

Leinberger, J., Milke, F., Christodoulou, M., Poehlein, A., Caraveo-Patiño, J., Teske, A., & Brinkhoff, T. (2022) · Scientific Reports · doi:10.1038/s41598-022-06666-x · Cited by 13 · see citing works

Highlighting of quorum sensing lux genes and their expression in the hydrothermal vent shrimp Rimicaris exoculata ectosymbiontic community. Possible use as biogeographic markers

Le Bloa, S., Durand, L., Cueff- Gauchard, V., Le Bars, J., Taupin, L., Marteau, C., Bazire, A., & Cambon-Bonavita, M.-A. (2017) · PLoS ONE · doi:10.1371/journal.pone.0174338 · Cited by 12 · see citing works

Identification and characterization of a symbiotic agglutination-related C-type lectin from the hydrothermal vent shrimp Rimicaris exoculata

Liu, X., Ye, S., Cheng, C.-Y., Li, H., Lu, B., Yang, W., & Yang, J. (2019) · Fish & Shellfish Immunology · doi:10.1016/j.fsi.2019.05.057 · Cited by 13 · see citing works

Blow Your Nose, Shrimp! Unexpectedly Dense Bacterial Communities Occur on the Antennae and Antennules of Hydrothermal Vent Shrimp

Zbinden, M., Gallet, A., Szafrański, K. M., Machon, J., Ravaux, J., Léger, N., & Duperron, S. (2018) · Frontiers in Marine Science · doi:10.3389/fmars.2018.00357 · Cited by 11 · see citing works

Compositional and Functional Shifts in the Epibiotic Bacterial Community of Shinkaia crosnieri Baba & Williams (a Squat Lobster from Hydrothermal Vents) during Methane-Fed Rearing

Watsuji, T., Motoki, K., Hada, E., Nagai, Y., Takaki, Y., Yamamoto, A., Uéda, K., Toyofuku, T., Yamamoto, H., & Takai, K. (2018) · Microbes and Environments · doi:10.1264/jsme2.me18072 · Cited by 11 · see citing works

Genomic evidence for the first symbiotic Deferribacterota, a novel gut symbiont from the deep-sea hydrothermal vent shrimp Rimicaris kairei

Qi, L., Shi, M., Zhu, F.-C., Lian, C., & He, L. (2023) · Frontiers in Microbiology · doi:10.3389/fmicb.2023.1179935 · Cited by 10 · see citing works

Multiple nutritional strategies of hydrothermal vent shrimp (Rimicaris hybisae) assemblages at the Mid-Cayman Rise

Versteegh, E. A. A., Dover, C. L. V., Audenhaege, L. V., & Coleman, M. L. (2022) · Deep Sea Research Part I Oceanographic Research Papers · doi:10.1016/j.dsr.2022.103915 · Cited by 10 · see citing works

Symbioses of alvinocaridid shrimps from the South West Pacific: No chemosymbiotic diets but conserved gut microbiomes

Methou, P., Cueff‐Gauchard, V., Michel, L. N., Gayet, N., Pradillon, F., & Cambon‐Bonavita, M. (2023) · Environmental Microbiology Reports · doi:10.1111/1758-2229.13201 · Cited by 8 · see citing works

Phylogenetic Characterization of Episymbiotic Bacteria Hosted by a Hydrothermal Vent Limpet (Lepetodrilidae, Vetigastropoda)

Bates, A. E., Harmer, T. L., Roeselers, G., & Cavanaugh, C. M. (2011) · Biological Bulletin · doi:10.1086/bblv220n2p118 · Cited by 10 · see citing works

Molecular study of bacterial diversity within the trophosome of the vestimentiferan tubeworm R idgeia piscesae

Forget, N. L., Perez, M., & Juniper, S. K. (2014) · Marine Ecology · doi:10.1111/maec.12169 · Cited by 9 · see citing works

Anatomy and Symbiosis of the Digestive System of the Vent Shrimp Rimicaris Exoculata and Rimicaris Chacei Revealed Through Imaging Approaches

Guéganton, M., Rouxel, O., Durand, L., Cueff‐Gauchard, V., Gayet, N., Pradillon, F., & Cambon‐Bonavita, M. (2022) · Frontiers in Marine Science · doi:10.3389/fmars.2022.903748 · Cited by 9 · see citing works

The phylogeography and ecology of Oligobrachia frenulate species suggest a generalist chemosynthesis-based fauna in the arctic

Sen, A., Andersen, L. W., Kjeldsen, K. U., Michel, L. N., Hong, W. L., Choquet, M., & Rasmussen, T. L. (2023) · Heliyon · doi:10.1016/j.heliyon.2023.e14232 · Cited by 7 · see citing works

Bacterial communities associated with Shinkaia crosnieri from the Iheya North, Okinawa Trough: Microbial diversity and metabolic potentials

Zhang, J., Zeng, Z., Chen, S., & Sun, L. (2017) · Journal of Marine Systems · doi:10.1016/j.jmarsys.2017.02.011 · Cited by 7 · see citing works

Molekulare Ökologie und Biogeographie methanotropher Bakterien in gefluteten Reisfeldern

Lüke, C. (2010) · Publikationsserver (Universitat Marburg) · doi:10.17192/z2010.0128 · Cited by 7 · see citing works

Symbiont Community Composition in Rimicaris kairei Shrimps from Indian Ocean Vents with Notes on Mineralogy

Methou, P., Hikosaka, M., Chen, C., Watanabe, H., Miyamoto, N., Makita, H., Takahashi, Y., & Jenkins, R. G. (2022) · Applied and Environmental Microbiology · doi:10.1128/aem.00185-22 · Cited by 6 · see citing works

Biometry and lifestyle of the Ordovician proetide trilobiteCyamella stensioeiOwens, 1979

Popp, A., & Pärnaste, H. (2011) · GFF · doi:10.1080/11035897.2011.599418 · Cited by 6 · see citing works

Microbial Habitats Associated with Deep-Sea Hydrothermal Vent Invertebrates: Insights from Microanalysis and Geochemical Modeling

Bris, N. L., & Gaill, F. (2010) · Topics in geobiology · doi:10.1007/978-90-481-9572-5_3 · Cited by 6 · see citing works

Symbiont Acquisition Strategies in Post‐Settlement Stages of Two Co‐Occurring Deep‐Sea Rimicaris Shrimp

Guéganton, M., Methou, P., Aubé, J., Noël, C., Rouxel, O., Cueff‐Gauchard, V., Gayet, N., Durand, L., Pradillon, F., & Cambon‐Bonavita, M. (2024) · Ecology and Evolution · doi:10.1002/ece3.70369 · Cited by 6 · see citing works

Epibiotic bacterial community of Sphaeroma serratum (Crustacea, Isopoda): relationship with molt status

Caro, A., Escalas, A., Bouvier, C., Grousset, E., Lautrédou-Audouy, N., Roques, C., Charmantier‐Daures, M., & Gros, O. (2012) · Marine Ecology Progress Series · doi:10.3354/meps09711 · Cited by 5 · see citing works

Carideicomes alvinocaridis gen. nov., sp. nov., a marine bacterium isolated from shrimp gill in a hydrothermal field of Okinawa Trough

Wang, Y., Liu, L., Yu, M., Zhou, S., Fu, T., Sun, W., Du, R., & Zhang, X. (2020) · INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · doi:10.1099/ijsem.0.003971 · Cited by 4 · see citing works

Symbiotic Relationships

Ciancio, A. (2016) · Springer eBooks · doi:10.1007/978-94-024-0884-3_3 · Cited by 4 · see citing works

Environmental Transmission of Symbionts in the Mangrove Crabs Aratus pisonii and Minuca rapax: Acquisition of the Bacterial Community through Larval Development to Juvenile Stage

Béziat, N. S., Duperron, S., & Gros, O. (2024) · Microorganisms · doi:10.3390/microorganisms12040652 · Cited by 1 · see citing works

FISH , a new tool for in situ preservation of RNA in tissues of deep‐sea mobile fauna

Cueff‐Gauchard, V., Aubé, J., Lagadec, J., Bignon, L., Lafontaine, J., Hernández‐Ávila, I., Marsaud, N., Shillito, B., Amand, L., Roussel, E. G., et al. (2025) · Limnology and Oceanography Methods · doi:10.1002/lom3.10677 · Cited by 1 · see citing works

Symbioses from Cold Seeps

Li, C., Wang, M., Wang, H., Zhou, L., Zhong, Z., Chen, H., & Sun, Y. (2023) · Springer eBooks · doi:10.1007/978-981-99-1494-4_6

A Review of Macrobiology–Microbiology Interactions at Mid‐Ocean Ridge Hydrothermal Systems and Their Role in Mediating Element Fluxes into the Ocean

Yohe, L. R., & Syverson, D. D. (2025) · Geophysical monograph · doi:10.1002/9781394229185.ch5

Description de la diversité microbienne associée à la crevette Rimicaris chacei : une possible double symbiose

Apremont, V. (2017) · doi:10.70675/d9f20765zc6ecz461bza22dz324ebafb09f8

Cycles de vie de deux crevettes hydrothermales de la dorsale médio-atlantique : Rimicaris exoculata et Rimicaris chacei

Methou, P. (2019) · theses.fr (ABES) · doi:10.70675/bf7aab7fzc361z40c2z9ac6z34c7f7b317db · Cited by 1 · see citing works

Sensory adaptations in shrimp from deep hydrothermal vents : Comparison of chemo‐ and thermo-sensory abilities in the vent species Mirocaris fortunata and the coastal species Palaemon elegans

Machon, J. (2018) · doi:10.70675/475f7677zfaeaz4eb7za25az115bbc1a8cac

Dynamique spatiale et temporelle des communautés mircrobiennes dans les édifices hydrothermaux actifs

François, D. (2021) · theses.fr (ABES) · doi:10.70675/190dfcaez1a58z4592z8996zfe84822b493e · Cited by 1 · see citing works

New insigths on the metabolic diversity among the epibiotic microbial community of the hydrothermal shrimp Rimicaris exoculata.

Zbinden, M., Shillito, B., Bris, N. L., de Montlaur, C. D. V., Roussel, E. G., Guyot, F., Gaill, F., & Cambon‐Bonavita, M. (2008) · HAL

Pathways of carbon and energy metabolism of the epibiotic community associated with the deep-sea hydrothermal vent shrimp Rimicaris exoculata

Petersen, J. M., Dubilier, N., Imhoff, J. F., & Sievert, S. M. (2011)

Acquisition of epibiotic bacteria along the life cycle of the hydrothermal shrimp <i>Rimicaris exoculata</i>

Guri, M., Durand, L., Cueff-Gauchard, V., Zbinden, M., Crassous, P., Shillito, B., & Cambon-Bonavita, M.-A. (2012) · The ISME Journal · doi:10.1038/ismej.2011.133 · Cited by 87 · see citing works

Distribution of bacteria and associated minerals in the gill chamber of the vent shrimp Rimicaris exoculata and related biogeochemical processes

Zbinden, M., Bris, N. L., Gaill, F., & Compère, P. (2004) · Flanders Marine Institute (Flanders Marine Institute)

Unexpected diversity within the Rimicaris exoculata epibiotic community - Insights into sulfur and carbon metabolism

Hügler, M., Struck, J., Dublier, N., Imhoff, J. F., & Sievert, S. M. (2009)