Assessment of genetic and epigenetic variation in hop plants regenerated from sequential subcultures of organogenic calli
Open accessAbstract
Organogenic calli induced from internodal segments were subcultured three times. Regenerated plants obtained from each subculture were analysed by molecular methods. No major genetic rearrangements were detected in the callus-derived plants since none of the amplified fragment-length polymorphism (AFLP) loci were found to be polymorphic. However, epigenetic changes due to a demethylation process were detected by methylation-sensitive amplified polymorphism (MSAP) technique. The results allowed inference of the possible relationship among the plants derived from different calli subcultures and the in vitro control. The plants recovered from the first and second callus subcultures clustered with the in vitro control pools in the phenogram while the regenerants from the third callus subculture showed the highest genetic distance with the controls. This is the first study reporting data about the genetic stability of callus-derived Humulus lupulus L. plants.
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In Humulus lupulus direct organogenesis, no variation was observed.
“No variation observed”
From Somaclonal Variation and Clonal Fidelity in Commercial Micropropagation: Challenges and Perspectives (2025) · cites this paper as [157]
The indexed Abstract (page unnumbered) reports no polymorphic AFLP loci or major genetic rearrangements in hop plants regenerated from organogenic calli. It does not describe direct organogenesis, and it reports epigenetic changes, so the unqualified claim that no variation was observed is too broad. (LLM, conf=0.87)
Experimental — accuracy not yet measuredIn hop, plants recovered from the first and second callus subcultures had very similar methylation profiles to the in vitro control pools, while regenerants from the third callus subculture showed the highest genetic distance from controls.
“Peredo et al. (2006) [121] identified, using the MSAP technique, that the plants recovered from the first and second callus subcultures had very similar methylation profiles to the in vitro control pools, while the regenerants from the third callus subculture showed the highest genetic distance from the controls.”
From Somaclonal Variation—Advantage or Disadvantage in Micropropagation of the Medicinal Plants (2023) · cites this paper as Peredo et al. (2006) [121]
The available indexed passages contain repository metadata and an abstract, but no section or page of the paper’s full text. Searches for the MSAP phenogram, methylation profiles, and third-subculture distance returned only that same abstract; under the supplied evidence rule, it cannot establish the verdict. (LLM, conf=0.72)
Experimental — accuracy not yet measured
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Percentages, sums and reported differences re-computed from the paper’s own numbers.
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- Authors
- Peredo, E. L., Ángeles Revilla, M., & Arroyo-García, R.
- Affiliations
- Universidad de Oviedo (ES)
- Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (ES)
- Corresponding author
- Peredo, Elena L.
- Venue
- Journal of Plant Physiology
- Publisher
- Elsevier BV
- Published
- 2006-10
- Volume
- 163
- Issue
- 10
- Pages
- 1071-1079
- ISSN
- 0176-1617 (ISSN-L)
- OpenAlex
- W2093352054
- Cited by
- 91
- References
- 32
- Citations by year
- 2026: 1 · 2025: 4 · 2024: 2 · 2023: 4 · 2022: 1 · 2021: 6 · 2020: 5 · 2019: 7 · 2018: 2 · 2017: 3 · 2016: 2 · 2015: 8 · 2014: 4 · 2013: 8 · 2012: 5
- FWCI
- 1.25
- Type
- journal article
- Language
- en
- Open access
- green
- hdl.handle.net
- Licence
- Locations
- Journal of Plant Physiology (publishedVersion)
- PubMed (publishedVersion)
- DIGITAL.CSIC (Spanish National Research Council (CSIC)) (submittedVersion)
- LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Científicas) (submittedVersion, cc-by-nc-sa)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Plant tissue culture and regeneration
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Genetically Modified Organisms Research
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant Genetic and Mutation Studies
- Keywords
- Humulus lupulus, organogenic callus, callus subculture, genetic stability, epigenetic variation, DNA methylation, demethylation, AFLP polymorphism, MSA-P, plant regeneration
- MeSH terms
- Polymorphism, Genetic, DNA Methylation, Humulus, Epigenesis, Genetic, Tissue Culture Techniques
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