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Re-print of “Intestinal luminal nitrogen metabolism: Role of the gut microbiota and consequences for the host”
Open accessAbstract
Alimentary and endogenous proteins are mixed in the small intestinal lumen with the microbiota. Although experimental evidences suggest that the intestinal microbiota is able to incorporate and degrade some of the available amino acids, it appears that the microbiota is also able to synthesize amino acids raising the view that amino acid exchange between the microbiota and host can proceed in both directions. Although the net result of such exchanges remains to be determined, it is likely that a significant part of the amino acids recovered from the alimentary proteins are used by the microbiota. In the large intestine, where the density of bacteria is much higher than in the small intestine and the transit time much longer, the residual undigested luminal proteins and peptides can be degraded in amino acids by the microbiota. These amino acids cannot be absorbed to a significant extent by the colonic epithelium, but are precursors for the synthesis of numerous metabolic end products in reactions made by the microbiota. Among these products, some like short-chain fatty acids and organic acids are energy substrates for the colonic mucosa and several peripheral tissues while others like sulfide and ammonia can affect the energy metabolism of colonic epithelial cells. More work is needed to clarify the overall effects of the intestinal microbiota on nitrogenous compound metabolism and consequences on gut and more generally host health.
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“Moreover, in the large intestine, the gut microbiota can also break down proteins to use as nitrogen sources to support their growth [17].”
From Role of the gut microbiota in nutrient competition and protection against intestinal pathogen colonization (2023) · cites this paper as [17]
In the citing paper
“Some taxa within the intestinal microbiota possess the enzymatic capacity (i.e., proteases) to degrade dietary protein (e.g., Bacteroides, Clostridium, Fusobacterium, Streptococcus), which could play especially important roles in protein-rich, low-fiber diets, in which microbial energy harvest shifts from carbohydrate to protein sources (373, 374).”
From Diet and the Microbiota–Gut–Brain Axis: Sowing the Seeds of Good Mental Health (2021) · cites this paper as [374]
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Dardmeh, N., Moazzami, A. A., Yavarmanesh, M., Matin, M. M., & Noorbakhsh, H. (2025) · Journal of the Science of Food and Agriculture · doi:10.1002/jsfa.70190 · Cited by 2
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Zhao, S., Yang, Z. H., Du, J., & Chen, M. (2025) · LWT · doi:10.1016/j.lwt.2025.118664 · Cited by 1
Zhao, Z., Zhou, M., Xu, Z., Wang, M., Yuan, E., Amakye, W. K., & Ren, J. (2025) · International Dairy Journal · doi:10.1016/j.idairyj.2025.106472 · Cited by 1
Yachida, M., Itoh, M., & Morita, Y. (2026) · Veterinary Sciences · doi:10.3390/vetsci13010082 · Cited by 1
Hagen, C. S., Şahin, O., Thomas, J., & Greiner, L. L. (2026) · Translational Animal Science · doi:10.1093/tas/txag019 · Cited by 1
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Connolly, K. R., Maher, S., Sweeney, T., & O’Doherty, J. V. (2026) · Agriculture · doi:10.3390/agriculture16111244 · Cited by 1
Microbial metabolites as emerging Biomodulators of host function and disease susceptibility
Hunzai, H., Ansari, A. A., Ghazanfar, S., Islam, A., Elkelish, A., Das, J., Chaudhary, P., Sridhar, S. B., Panigrahy, U. P., Mantry, S., et al. (2026) · PharmaNutrition · doi:10.1016/j.phanu.2026.100523 · Cited by 2
Mechanisms, Prevention and Management of Diarrhoea in Enteral Nutrition
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Changes in routines often increase the risk of mishaps.
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Metadata
- Authors
- Davila, A.-M., Blachier, F., Gotteland, M., Andriamihaja, M., Benetti, P.-H., Sanz, Y., & Tomé, D.
- Affiliations
- AgroParisTech (FR)
- Instituto de Agroquímica y Tecnología de Alimentos (ES)
- Corresponding author
- Davila, Anne-Marie
- Venue
- Pharmacological Research
- Publisher
- Elsevier BV
- Published
- 2013-03
- Volume
- 69
- Issue
- 1
- Pages
- 114-126
- ISSN
- 1043-6618 (ISSN-L)
- OpenAlex
- W2084796563
- Cited by
- 231
- References
- 182
- Citations by year
- 2026: 17 · 2025: 19 · 2024: 17 · 2023: 22 · 2022: 34 · 2021: 28 · 2020: 21 · 2019: 18 · 2018: 18 · 2017: 11 · 2016: 10 · 2015: 8 · 2014: 4 · 2013: 3
- FWCI
- 3.71
- Type
- journal article
- Language
- en
- Open access
- Licence
- cc-by-nc-nd
- www.elsevier.com/tdm/userlicense/1.0/ (tdm)
- Locations
- Pharmacological Research (publishedVersion)
- PubMed (publishedVersion)
- HAL (submittedVersion)
- Universidad de Chile (submittedVersion, cc-by-nc-nd)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Gut microbiota and health
- Life Sciences › Agricultural and Biological Sciences › Animal Science and Zoology › Animal Nutrition and Physiology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Biochemistry › Amino Acid Enzymes and Metabolism
- Keywords
- gut microbiota, amino acid metabolism, short-chain fatty acids, sulfide, ammonia, colonic mucosa
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