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Melanesian origin of Polynesian Y chromosomes
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Background Two competing hypotheses for the origins of Polynesians are the 'express-train' model, which supposes a recent and rapid expansion of Polynesian ancestors from Asia/Taiwan via coastal and island Melanesia, and the 'entangled-bank' model, which supposes a long history of cultural and genetic interactions among Southeast Asians, Melanesians and Polynesians. Most genetic data, especially analyses of mitochondrial DNA (mtDNA) variation, support the express-train model, as does linguistic and archaeological evidence. Here, we used Y-chromosome polymorphisms to investigate the origins of Polynesians. Results We analysed eight single nucleotide polymorphisms (SNPs) and seven short tandem repeat (STR) loci on the Y chromosome in 28 Cook Islanders from Polynesia and 583 males from 17 Melanesian, Asian and Australian populations. We found that all Polynesians belong to just three Y-chromosome haplotypes, as defined by unique event polymorphisms. The major Y haplotype in Polynesians (82% frequency) was restricted to Melanesia and eastern Indonesia and most probably arose in Melanesia. Coalescence analysis of associated Y-STR haplotypes showed evidence of a population expansion in Polynesians, beginning about 2,200 years ago. The other two Polynesian Y haplotypes were widespread in Asia but were also found in Melanesia. Conclusions All Polynesian Y chromosomes can be traced back to Melanesia, although some of these Y-chromosome types originated in Asia. Together with other genetic and cultural evidence, we propose a new model of Polynesian origins that we call the 'slow-boat' model: Polynesian ancestors did originate from Asia/Taiwan but did not move rapidly through Melanesia; rather, they interacted with and mixed extensively with Melanesians, leaving behind their genes and incorporating many Melanesian genes before colonising the Pacific.
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The Slow Boat model assumes Polynesian ancestors originated in Eastern Asia but mixed extensively with indigenous Melanesians before colonizing the Pacific.
“The Slow Boat model assumes that Polynesian ancestors originated in Eastern Asia but mixed extensively with indigenous Melanesians before colonizing the Pacific (Kayser, Brauer et al. 2000).”
From Melanesian and Asian origins of Polynesians: MtDNA and Y chromosome gradients across the Pacific (2006) · cites this paper as Kayser, Brauer et al. 2000
Studies of paternally inherited NRY markers have revealed a mostly Melanesian origin of Polynesian paternal lineages.
“studies of paternally inherited DNA markers from the nonrecombining portion of the Y chromosome (NRY) have revealed a mostly Melanesian origin of Polynesian paternal lineages (Kayser, Brauer et al. 2000;Capelli et al. 2001;Underhill, Passarino, Lin, Marzuki et al. 2001;Hurles et al. 2002) supporting the ''Slow Boat'' hypothesis”
From Melanesian and Asian origins of Polynesians: MtDNA and Y chromosome gradients across the Pacific (2006) · cites this paper as Kayser, Brauer et al. 2000
The Slow Boat hypothesis holds that Polynesian ancestors originated in Asia, moved eastward, and mixed extensively with local Melanesians before colonizing the Pacific Islands.
“the Slow Boat hypothesis of Polynesian origins (Kayser, Brauer et al. 2000) according to which Polynesian ancestors originated in Asia, moved eastward, and mixed extensively with local Melanesians before colonizing the Pacific Islands.”
From Melanesian and Asian origins of Polynesians: MtDNA and Y chromosome gradients across the Pacific (2006) · cites this paper as Kayser, Brauer et al. 2000
Citations
Cites
Median-joining networks for inferring intraspecific phylogenies
Bandelt, H. J., Forster, P., & Rohl, A. (1999) · Molecular Biology and Evolution · doi:10.1093/oxfordjournals.molbev.a026036 · Cited by 11,742
(1995) · Molecular Biology and Evolution · doi:10.1093/oxfordjournals.molbev.a040240 · Cited by 236
Self-citation
Flagged first, then by citations
Research works printed but not linked: 46
- Blust, 1984, The Austronesian homeland: a linguistic perspective, Asian Perspect, 26, 45
- Blust, 1999, Subgrouping, circularity and extinction: some issues in Austronesian comparative linguistics, Symp Ser Inst Linguist Acad Sinica, 1, 31
- Diamond, 2000, Taiwan’s gift to the world, Nature, 403, 709, 10.1038/35001685 · DOI · Paper page
- Diamond, 1988, Express train to Polynesia, Nature, 336, 307, 10.1038/336307a0 · DOI · Paper page
- Melton, 1995, Polynesian genetic affinities with Southeast Asian populations as identified by mtDNA analysis, Am J Hum Genet, 57, 403
- Sykes, 1995, The origins of the Polynesians: an interpretation from mitochondrial lineage analysis, Am J Hum Genet, 57, 1463
- Serjeantson, 1982, The colonization of the Pacific: the story according to human leukocyte antigens, Am J Hum Genet, 34, 904
- Serjeantson, 1984, Migration and admixture in the Pacific, J Pac Hist, 19, 123, 10.1080/00223348408572491 · DOI
- Anson, 1986, Lapita pottery of the Bismarck Archipelago and its affinities, Archeol Oceania, 21, 157, 10.1002/j.1834-4453.1986.tb00144.x · DOI
- Terrell, 1989, What Lapita is and what Lapita isn’t, Antiquity, 63, 623, 10.1017/S0003598X00076584 · DOI
- Hill, 1985, Melanesians and Polynesians share a unique α-thalassemia mutation, Am J Hum Genet, 37, 571
- Flint, 1986, High frequencies of α-thalassemia are the result of natural selection by malaria, Nature, 321, 744, 10.1038/321744a0 · DOI
- Hill, 1987, Polynesian origins and affinities: globin gene variants in eastern Polynesia, Am J Hum Genet, 40, 453
- O’Shaughnessy, 1990, Globin gene in Micronesia: origin and affinities of Pacific Island peoples, Am J Hum Genet, 46, 144
- Bonatto, 1996, Lack of ancient Polynesian-Amerindian contact, Am J Hum Genet, 59, 253
- Spurdle, 1994, The genetic affinity of Polynesians: evidence from Y chromosome polymorphisms, Ann Hum Genet, 58, 251, 10.1111/j.1469-1809.1994.tb01889.x · DOI
- Hurles, 1998, European Y-chromosomal lineages in Polynesia: a contrast to the population structure revealed by mtDNA, Am J Hum Genet, 63, 1793, 10.1086/302147 · DOI · Paper page
- Forster, 1998, Phylogenetic resolution of complex mutational features at Y-STR DYS390 in aboriginal Australians and Papuans, Mol Biol Evol, 15, 1108, 10.1093/oxfordjournals.molbev.a026018 · DOI
- Bergen, 1999, An Asian-Native American paternal lineage identified by RPS4Y resequencing and by microsatellite haplotyping, Ann Hum Genet, 63, 63, 10.1046/j.1469-1809.1999.6310063.x · DOI
- Pandya A: Human Y-chromosomal DNA variation. DPhil thesis. Oxford, Oxford University; 1998.
- Karafet, 1999, Ancestral Asian source(s) of New World Y-chromosome founder haplotypes, Am J Hum Genet, 64, 817, 10.1086/302282 · DOI
- Hagelberg, 1999, Molecular genetic evidence for the human settlement of the Pacific: analysis of mitochondrial DNA, Y chromosome and HLA markers, Phil Trans R Soc Lond B, 354, 141, 10.1098/rstb.1999.0367 · DOI
- Deka, 1996, Dispersion of human Y chromosome haplotypes based on five microsatellites in global populations, Genome Res, 6, 1177, 10.1101/gr.6.12.1177 · DOI
- Santos, 1999, The central Siberian origin for native American Y chromosomes, Am J Hum Genet, 64, 619, 10.1086/302242 · DOI
- Forster, 2000, A short tandem repeat-based phylogeny for the human Y chromosome, Am J Hum Genet, 67, 182, 10.1086/302953 · DOI
- Su, 1999, Y-chromosome evidence for a northward migration of modern humans into Eastern Asia during the last Ice Age, Am J Hum Genet, 65, 1718, 10.1086/302680 · DOI
- Qian, 2000, Multiple origins of Tibetan Y chromosomes, Hum Genet, 106, 453, 10.1007/s004390000259 · DOI
- Underhill, 1997, Detection of numerous Y chromosome biallelic polymorphisms by denaturing high-performance liquid chromatography, Genome Res, 7, 996, 10.1101/gr.7.10.996 · DOI
- Flint, 1989, Population bottlenecks in Polynesia revealed by minisatellites, Hum Genet, 83, 257, 10.1007/BF00285167 · DOI · Paper page
- Lum, 1998, Mitochondrial and nuclear genetic relationships among Pacific Island and Asian populations, Am J Hum Genet, 63, 613, 10.1086/301949 · DOI
- Su, 2000, Polynesian origins: insights from the Y chromosome, Proc Natl Acad Sci USA, 97, 8225, 10.1073/pnas.97.15.8225 · DOI
- Mack, 2000, Evolution of Pacific/Asian populations inferred from HLA class II allele frequency distributions, Tissue Antigens, 55, 383, 10.1034/j.1399-0039.2000.550501.x · DOI
- Zimdahl, 1999, Towards understanding the origin and dispersal of Austronesians in the Solomon Sea: HLA class II polymorphism in eight distinct populations of Asia-Oceania, Eur J Immunogenet, 26, 405, 10.1046/j.1365-2370.1999.00183.x · DOI
- Tsuji K, Aizawa M, Sazazuki T: HLA 1991: Proceedings of the 11th International Histocompatibility Workshop and Conference. Oxford: Oxford University Press; 1992.
- Hashimoto, 1994, Gene frequencies and haplotypic associations within the HLA region in 916 unrelated Japanese individuals, Tissue Antigens, 44, 166, 10.1111/j.1399-0039.1994.tb02375.x · DOI
- Gao, 1992, HLA-DR, DQ nucleotide sequence polymorphisms in five Melanesian populations, Tissue Antigens, 40, 31, 10.1111/j.1399-0039.1992.tb01954.x · DOI
- Perez-Lezaun, 1999, Sex-specific migration patterns in central Asian populations, revealed by analysis of Y-chromosome short tandem repeats and mtDNA, Am J Hum Genet, 65, 208, 10.1086/302451 · DOI
- Lum, 1994, Polynesian mitochondrial DNAs reveal three deep maternal lineage clusters, Hum Biol, 66, 567
- Cann, 2000, Talking trees tell tales, Nature, 405, 1008, 10.1038/35016679 · DOI
- Gray, 2000, Language trees support the express-train sequence of Austronesian expansion, Nature, 405, 1052, 10.1038/35016575 · DOI · Paper page
- Stoneking, 1990, Geographic variation in human mitochondrial DNA from Papua New Guinea, Genetics, 124, 717, 10.1093/genetics/124.3.717 · DOI
- Redd, 1999, Peopling of Sahul: mtDNA variation in aboriginal Australian and Papua New Guinea populations, Am J Hum Genet, 65, 808, 10.1086/302533 · DOI · Paper page
- Kayser, 1997, Evaluation of Y chromosomal STRs: a multicenter study, Int J Legal Med, 110, 125, 10.1007/s004140050051 · DOI
- Redd, 1997, Multiplex DNA typing of short-tandem-repeat loci on the Y chromosome, Biol Chem, 378, 923
- Kayser, 2000, Characteristics and frequency of germline mutations at microsatellite loci from the human Y chromosome, as revealed by direct observation in father/son pairs, Am J Hum Genet, 66, 1580, 10.1086/302905 · DOI
- Wilson, 1998, Genealogical inference from microsatellite data, Genetics, 150, 499, 10.1093/genetics/150.1.499 · DOI
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Metadata
- Authors
- Kayser, M., Brauer, S., Weiss, G., Underhill, P., Roewer, L., Schiefenhövel, W., & Stoneking, M.
- Affiliations
- Max Planck Society (DE)
- Stanford University (US)
- Humboldt-Universität zu Berlin (DE)
- Corresponding author
- Kayser, Manfred
- Venue
- Current Biology
- Publisher
- Elsevier BV
- Published
- 2000-10
- Volume
- 10
- Issue
- 20
- Pages
- 1237-1246
- ISSN
- 0960-9822 (ISSN-L)
- OpenAlex
- W2146807292
- Cited by
- 190
- References
- 2
- Citations by year
- 2026: 2 · 2025: 5 · 2024: 3 · 2023: 4 · 2022: 1 · 2021: 3 · 2020: 1 · 2019: 1 · 2018: 10 · 2017: 1 · 2016: 7 · 2015: 6 · 2014: 11 · 2013: 4 · 2012: 9
- FWCI
- 4.76
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Licence
- Locations
- Current Biology (publishedVersion)
- PubMed (publishedVersion)
- Max Planck Institute for Plasma Physics (submittedVersion)
- Max Planck Digital Library (submittedVersion)
- MPG.PuRe (Max Planck Society) (submittedVersion)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Forensic and Genetic Research
- Social Sciences › Anthropology › Pacific and Southeast Asian Studies
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic diversity and population structure
- Keywords
- Polynesian origins, Y-chromosome haplotypes, Polynesian migration, population growth, Y-STR haplotypes, Y-chromosome SNPs, genetic admixture
- MeSH terms
- Asia, Chromosome Mapping, DNA, Mitochondrial, Geography, Haplotypes, Humans, Indonesia, Male, Melanesia, Polynesia, Taiwan, Y Chromosome, Racial Groups
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