The DOI matches its Crossref record; 56 of the 56 references it cites were found in a registry or an index.
DNA Excited-State Dynamics: Ultrafast Internal Conversion and Vibrational Cooling in a Series of Nucleosides
Abstract
To better understand DNA photodamage, several nucleosides were studied by femtosecond transient absorption spectroscopy. A 263-nm, 150-fs ultraviolet pump pulse excited each nucleoside in aqueous solution, and the subsequent dynamics were followed by transient absorption of a femtosecond continuum pulse at wavelengths between 270 and 700 nm. A transient absorption band with maximum amplitude near 600 nm was detected in protonated guanosine at pH 2. This band decayed in 191 +/- 4 ps in excellent agreement with the known fluorescence lifetime, indicating that it arises from absorption by the lowest excited singlet state. Excited state absorption for guanosine and the other nucleosides at pH 7 was observed in the same spectral region, but decayed on a subpicosecond time scale by internal conversion to the electronic ground state. The cross section for excited state absorption is very weak for all nucleosides studied, making some amount of two-photon ionization of the solvent unavoidable. The excited state lifetimes of Ado, Guo, Cyd, and Thd were determined to be 290, 460, 720, and 540 fs, respectively (uncertainties are +/-40 fs). The decay times are shorter for the purines than for the pyrimidine bases, consistent with their lower propensity for photochemical damage. Following internal conversion, vibrationally highly excited ground state molecules were detected in experiments on Ado and Cyd by hot ground state absorption at ultraviolet wavelengths. The decays are assigned to intermolecular vibrational energy transfer to the solvent. The longest time constant observed for Ado is approximately 2 ps, and we propose that solute-solvent H-bonds are responsible for this fast rate of vibrational cooling. The results show for the first time that excited singlet state dynamics of the DNA bases can be directly studied at room temperature. Like sunscreens that function by light absorption, the bases rapidly convert dangerous electronic energy into heat, and this property is likely to have played a critical role in life's early evolution on earth.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Relationship between Absorption Intensity and Fluorescence Lifetime of Molecules
Strickler, S. J., & Berg, R. A. (1962) · The Journal of Chemical Physics · doi:10.1063/1.1733166 · Cited by 2,481
Steenken, S., & Jovanovic, S. V. (1997) · Journal of the American Chemical Society · doi:10.1021/ja962255b · Cited by 1,450
CRC handbook of organic photochemistry and photobiology
(1996) · Choice Reviews Online · doi:10.5860/choice.33-3321 · Cited by 1,416
Excited states and photochemistry of organic molecules
(1996) · Choice Reviews Online · doi:10.5860/choice.33-3919 · Cited by 1,250
Seidel, C. A. M., Schulz, A., & Sauer, M. H. M. (1996) · The Journal of Physical Chemistry · doi:10.1021/jp951507c · Cited by 1,006
PHYSICAL CHEMISTRY OF NUCLEIC ACIDS
Tinoco, I. (2002) · Annual Review of Physical Chemistry · doi:10.1146/annurev.physchem.53.082001.144341 · Cited by 789
Long-Range Charge Transfer in DNA: Transient Structural Distortions Control the Distance Dependence
Schuster, G. B. (2000) · Accounts of Chemical Research · doi:10.1021/ar980059z · Cited by 778
CHARACTERIZATION AND BIOLOGICAL IMPLICATIONS OF SCYTONEMIN, A CYANOBACTERIAL SHEATH PIGMENT1
Garcia‐Pichel, F., & Castenholz, R. W. (1991) · Journal of Phycology · doi:10.1111/j.0022-3646.1991.00395.x · Cited by 737
Charge transfer and transport in DNA
Jortner, J., Bixon, M., Langenbacher, T., & Michel-Beyerle, M. E. (1998) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.95.22.12759 · Cited by 724
Vibrational and Vibronic Relaxation of Large Polyatomic Molecules in Liquids
Elsaesser, T., & Kaiser, W. (1991) · Annual Review of Physical Chemistry · doi:10.1146/annurev.pc.42.100191.000503 · Cited by 622
Cited by
Sobolewski, A. L., Domcke, W., Dedonder-Lardeux, C., & Jouvet, C. (2002) · Physical Chemistry Chemical Physics · doi:10.1039/b110941n · Cited by 915
Water Dynamics in the Hydration Shells of Biomolecules
Laage, D., Elsaesser, T., & Hynes, J. T. (2017) · Chemical Reviews · doi:10.1021/acs.chemrev.6b00765 · Cited by 913
DNA Excited-State Dynamics: From Single Bases to the Double Helix
Middleton, C. T., de La Harpe, K., Su, C., Law, Y. K., Crespo-Hernández, C. E., & Kohler, B. (2009) · Annual Review of Physical Chemistry · doi:10.1146/annurev.physchem.59.032607.093719 · Cited by 827
Self-citationAkimov, A. V., & Prezhdo, O. V. (2014) · Journal of Chemical Theory and Computation · doi:10.1021/ct400934c · Cited by 608
Base stacking controls excited-state dynamics in A·T DNA
Crespo-Hernández, C. E., Cohen, B., & Kohler, B. (2005) · Nature · doi:10.1038/nature03933 · Cited by 461
Self-citationProgress and Challenges in the Calculation of Electronic Excited States
González, L., Escudero, D., & Serrano‐Andrés, L. (2012) · ChemPhysChem · doi:10.1002/cphc.201100200 · Cited by 429
Early Events of DNA Photodamage
Schreier, W. J., Gilch, P., & Zinth, W. (2015) · Annual Review of Physical Chemistry · doi:10.1146/annurev-physchem-040214-121821 · Cited by 221
Life in the light: nucleic acid photoproperties as a legacy of chemical evolution
Beckstead, A. A., Zhang, Y., de Vries, M. S., & Kohler, B. (2016) · Physical Chemistry Chemical Physics · doi:10.1039/c6cp04230a · Cited by 153
Self-citationExcited-State Dynamics in 6-Thioguanosine from the Femtosecond to Microsecond Time Scale
Reichardt, C., Guo, C., & Crespo-Hernández, C. E. (2011) · The Journal of Physical Chemistry B · doi:10.1021/jp112018u · Cited by 109
UV‐induced DNA Damage: The Role of Electronic Excited States
Markovitsi, D. (2016) · Photochemistry and Photobiology · doi:10.1111/php.12533 · Cited by 100
Rios, A. C., & Tor, Y. (2013) · Israel Journal of Chemistry · doi:10.1002/ijch.201300009 · Cited by 98
Harada, Y., Suzuki, T., Ichimura, T., & Xu, Y.-Z. (2007) · The Journal of Physical Chemistry B · doi:10.1021/jp0678094 · Cited by 90
Dereka, B., & Vauthey, E. (2017) · Chemical Science · doi:10.1039/c7sc00437k · Cited by 82
Metadata
- Authors
- Pecourt, J.-M. L., Peon, J., & Kohler, B.
- Venue
- Journal of the American Chemical Society
- Publisher
- American Chemical Society (ACS)
- Published
- 2001-10-01
- Volume
- 123
- Issue
- 42
- Pages
- 10370-10378
- ISSN
- 0002-7863 (ISSN-L)
- 1520-5126
- OpenAlex
- W2020678264
- Cited by
- 411
- References
- 56
- FWCI
- 11.18
- Type
- journal article
- Language
- en
- Open access
- closed
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.