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The importance of repairing stalled replication forks
Abstract
The bacterial SOS response to unusual levels of DNA damage has been recognized and studied for several decades. Pathways for re-establishing inactivated replication forks under normal growth conditions have received far less attention. In bacteria growing aerobically in the absence of SOS-inducing conditions, many replication forks encounter DNA damage, leading to inactivation. The pathways for fork reactivation involve the homologous recombination systems, are nonmutagenic, and integrate almost every aspect of DNA metabolism. On a frequency-of-use basis, these pathways represent the main function of bacterial DNA recombination systems, as well as the main function of a number of other enzymatic systems that are associated with replication and site-specific recombination.
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“Unrepaired fork gaps can become frank DSB [24, 61, 62].”
From NER initiation factors, DDB2 and XPC, regulate UV radiation response by recruiting ATR and ATM kinases to DNA damage sites (2013) · cites this paper as [62]
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Metadata
- Authors
- Cox, M. M., Goodman, M. F., Kreuzer, K. N., Sherratt, D. J., Sandler, S. J., & Marians, K. J.
- Affiliations
- University of Wisconsin System (US)
- University of Southern California (US)
- Duke Medical Center (US)
- University of Oxford (GB)
- University of Massachusetts Amherst (US)
- Memorial Sloan Kettering Cancer Center (US)
- Venue
- Nature
- Published
- 2000-03
- Volume
- 404
- Issue
- 6773
- Pages
- 37-41
- ISSN
- 0028-0836 (ISSN-L)
- 1476-4687
- OpenAlex
- W1570361288
- Cited by
- 1,044
- References
- 63
- Citations by year
- 2026: 11 · 2025: 10 · 2024: 13 · 2023: 14 · 2022: 26 · 2021: 27 · 2020: 21 · 2019: 22 · 2018: 26 · 2017: 22 · 2016: 36 · 2015: 34 · 2014: 49 · 2013: 43 · 2012: 39
- FWCI
- 28.72
- Type
- journal article
- Language
- en
- Open access
- closed
- Licence
- www.springer.com/tdm (tdm)
- Locations
- Nature (publishedVersion)
- PubMed (publishedVersion)
- ScholarWorks@UMassAmherst (University of Massachusetts Amherst) (submittedVersion)
- RePEc: Research Papers in Economics (submittedVersion)
- Funders
- National Institute of General Medical Sciences (R37GM034557)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › DNA Repair Mechanisms
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Bacterial Genetics and Biotechnology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › CRISPR and Genetic Engineering
- Keywords
- stalled replication forks, bacterial DNA damage, SOS response, homologous recombination, DNA repair, site-specific recombination, DNA metabolism
- MeSH terms
- Bacteria, Bacterial Proteins, Chromosomes, Bacterial, DNA Replication, DNA, Bacterial, Escherichia coli, Recombination, Genetic, SOS Response, Genetics, Replication Origin
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
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