The Genotype-Tissue Expression (GTEx) project

Lonsdale, John, Thomas, Jeffrey, Salvatore, Mike, Phillips, Rebecca, Lo, Edmund, Shad, Saboor, Hasz, Richard, Walters, Gary +119 more·2013·Nature Genetics
DOI 10.1038/ng.2653

Cited by (488)

Items 201–300 of 488

  1. Distribution and Medical Impact of Loss-of-Function Variants in the Finnish Founder Population
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  2. Diverse Oncogenic Fusions and Distinct Gene Expression Patterns Define the Genomic Landscape of Pediatric Papillary Thyroid Carcinoma
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  6. Risk variants and polygenic architecture of disruptive behavior disorders in the context of attention-deficit/hyperactivity disorder
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  7. Lipoprotein signatures of cholesteryl ester transfer protein and HMG-CoA reductase inhibition
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  8. Doubly debiased lasso: High-dimensional inference under hidden confounding
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  9. Identification of a novel, methylation-dependent, RUNX2 regulatory region associated with osteoarthritis risk
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  10. Transcriptome analysis of cortical tissue reveals shared sets of downregulated genes in autism and schizophrenia
    Ellis, S E, Panitch, R, West, A B, Arking, D E · 2016 · Translational Psychiatry
  11. ACE2 and COVID-19 Susceptibility and Severity
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  12. A genome-wide investigation of food addiction
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  13. Genome‐Wide Association Studies
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  14. <i>IQSEC2</i>mutation update and review of the female-specific phenotype spectrum including intellectual disability and epilepsy
    Shoubridge, Cheryl, Harvey, Robert J., Dudding-Byth, Tracy · 2019 · Human Mutation
  15. BarkBase: Epigenomic Annotation of Canine Genomes
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  16. Data-based RNA-seq simulations by binomial thinning
    David Gerard · 2020 · BMC Bioinformatics
  17. Genetics of endometriosis: state of the art on genetic risk factors for endometriosis
    Fung, Jenny N., Montgomery, Grant W. · 2018 · Best Practice &amp; Research Clinical Obstetrics &amp; Gynaecology
  18. Highly accurate isoform identification for the human transcriptome
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  19. Inherited Chromosomally Integrated Human Herpesvirus 6 Demonstrates Tissue-Specific RNA Expression <i>In Vivo</i> That Correlates with an Increased Antibody Immune Response
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  20. A genetically defined disease model reveals that urothelial cells can initiate divergent bladder cancer phenotypes
    Liang Wang, Bryan A. Smith, Nikolas G. Balanis, Brandon L. Tsai, Kim Ngoc Nguyen, Michael W. Cheng, Matthew B. Obusan, Favour N. Esedebe, Saahil J. Patel, Hanwei Zhang et al. · 2019 · Proceedings of the National Academy of Sciences
  21. COVID-19-Related Coagulopathy—Is Transferrin a Missing Link?
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  22. Exploring genetic variation that influences brain methylation in attention-deficit/hyperactivity disorder
    Laura Pineda-Cirera, Anu Shivalikanjli, Judit Cabana‐Domínguez, Ditte Demontis, Veera Manikandan Rajagopal, Anders Dupont Børglum, Stephen V. Faraone, Bru Cormand, Noèlia Fernàndez‐Castillo · 2019 · Translational Psychiatry
  23. Single cell sequencing analysis identifies genetics-modulated ORMDL3+ cholangiocytes having higher metabolic effects on primary biliary cholangitis
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  24. Truncating variant burden in high-functioning autism and pleiotropic effects of <i>LRP1</i> across psychiatric phenotypes
    Torrico, Bàrbara, Shaw, Alex D., Mosca, Roberto, Vivó-Luque, Norma, Hervás, Amaia, Fernàndez-Castillo, Noèlia, Aloy, Patrick, Bayés, Mònica, Fullerton, Janice M., Cormand, Bru et al. · 2019 · Journal of Psychiatry and Neuroscience
  25. The involvement of the canonical Wnt‐signaling receptor <i>LRP5</i> and <i>LRP6</i> gene variants with ADHD and sexual dimorphism: Association study and meta‐analysis
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  26. Prediction of LDL cholesterol response to statin using transcriptomic and genetic variation
    Kyungpil Kim, Eugene Bolotin, Elizabeth Theusch, Haiyan Huang, Marisa Wong Medina, Ronald M. Krauss · 2014 · Genome biology
  27. Desaturase Activity and the Risk of Type 2 Diabetes and Coronary Artery Disease: A Mendelian Randomization Study
    Susanne Jäger, Rafael R. C. Cuadrat, Per Hoffmann, Clemens Wittenbecher, Matthias Bernd Schulze · 2020 · Nutrients
  28. Genome‐Wide Association Study Identifies Loci for Liver Enzyme Concentrations in Mexican Americans: The GUARDIAN Consortium
    Kendra A. Young, Nicholette D. Palmer, Tasha E. Fingerlin, Carl D. Langefeld, Jill M. Norris, Nan Wang, Anny H. Xiang, Xiuqing Guo, Adrienne H. Williams, Yii‐Der Ida Chen et al. · 2019 · Obesity
  29. Sequencing Analysis at 8p23 Identifies Multiple Rare Variants in DLC1 Associated with Sleep-Related Oxyhemoglobin Saturation Level
    Liang, Jingjing, Cade, Brian E., He, Karen Y., Wang, Heming, Lee, Jiwon, Sofer, Tamar, Williams, Stephanie, Li, Ruitong, Chen, Han, Gottlieb, Daniel J. et al. · 2019 · The American Journal of Human Genetics
  30. Identifying therapeutic targets for cancer among 2074 circulating proteins and risk of nine cancers
    Smith-Byrne, Karl, Hedman, Åsa, Dimitriou, Marios, Desai, Trishna, Sokolov, Alexandr V., Schioth, Helgi B., Koprulu, Mine, Pietzner, Maik, Langenberg, Claudia, Atkins, Joshua et al. · 2024 · Nature Communications
  31. DNA methylation correlates of chronological age in diverse human tissue types
    Niyati Jain, James Li, Tong Lin, Farzana Jasmine, Muhammad Ghulam Kibriya, Kathryn Demanelis, Meritxell Oliva, Lin Chen, Brandon L. Pierce · 2024 · Epigenetics & Chromatin
  32. Human Genes Involved in the Interaction between Host and Gut Microbiome: Regulation and Pathogenic Mechanisms
    Luigi Boccuto, Jan F. Tack, Gianluca Ianiro, Ludovico Abenavoli, Emidio Scarpellini · 2023 · Genes
  33. Genome-Wide Association Study of Metabolic Syndrome Reveals Primary Genetic Variants at CETP Locus in Indians
    Gauri Prasad, Khushdeep Bandesh, Anil Giri, Yasmeen Kauser, Prakriti Chanda, Vaisak Parekatt, INDICO, Sandeep Kumar Mathur, Sri Venkata Madhu, Pradeep Venkatesh et al. · 2019 · Biomolecules
  34. Phenotype prediction from single-cell RNA-seq data using attention-based neural networks
    Mao, Yuzhen, Lin, Yen-Yi, Wong, Nelson K Y, Volik, Stanislav, Sar, Funda, Collins, Colin, Ester, Martin · 2024 · Bioinformatics
  35. RNA-Seq optimization with eQTL gold standards
    Ellis, Shannon E, Gupta, Simone, Ashar, Foram N, Bader, Joel S, West, Andrew B, Arking, Dan E · 2013 · BMC Genomics
  36. T‐type calcium channels as therapeutic targets in essential tremor and Parkinson's disease
    Lillian G. Matthews, Corey B. Puryear, Susana Santos Correia, Sharan R. Srinivasan, Gabriel M. Belfort, Ming‐Kai Pan, Sheng‐Han Kuo · 2023 · Annals of Clinical and Translational Neurology
  37. Severe Asthma and Biological Therapies: Now and the Future
    Olaia Sardón‐Prado, Carolina Diaz García, Paula Corcuera, Javier Korta‐Murua, José Valverde‐Molina, Manuel Sánchez‐Solís · 2023 · Journal of Clinical Medicine
  38. Deleterious Variation in BRSK2 Associates with a Neurodevelopmental Disorder
    Hiatt, Susan M., Thompson, Michelle L., Prokop, Jeremy W., Lawlor, James M.J., Gray, David E., Bebin, E. Martina, Rinne, Tuula, Kempers, Marlies, Pfundt, Rolph, van Bon, Bregje W. et al. · 2019 · The American Journal of Human Genetics
  39. Genome-Wide Association Study of Over 427,000 Individuals Establishes Executive Functioning as a Neurocognitive Basis of Psychiatric Disorders Influenced by GABAergic Processes
    Hatoum, Alexander S., Morrison, Claire L., Mitchell, Evann C., Lam, Max, Benca-Bachman, Chelsie E., Reineberg, Andrew E., Palmer, Rohan H. C., Evans, Luke M., Keller, Matthew C., Friedman, Naomi P. · 2019
  40. RNA Binding Proteins as Drivers and Therapeutic Target Candidates in Pancreatic Ductal Adenocarcinoma
    Markus Glaß, Patrick Michl, Stefan Hüttelmaier · 2020 · International Journal of Molecular Sciences
  41. The YAP-Interacting Phosphatase SHP2 Can Regulate Transcriptional Coactivity and Modulate Sensitivity to Chemotherapy in Cholangiocarcinoma
    EeeLN H. Buckarma, Nathan W. Werneburg, Caitlin B. Conboy, Ayano Kabashima, Daniel R. O’Brien, Chen Wang, Sumera Irie Ilyas, Rory L. Smoot · 2020 · Molecular Cancer Research
  42. LncRNA GSCAR promotes glioma stem cell maintenance via stabilizing SOX2 expression
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  43. Detecting multiple differentially methylated CpG sites and regions related to dimensional psychopathology in youths
    Spindola, Leticia M., Santoro, Marcos L., Pan, Pedro M., Ota, Vanessa K., Xavier, Gabriela, Carvalho, Carolina M., Talarico, Fernanda, Sleiman, Patrick, March, Michael, Pellegrino, Renata et al. · 2019 · Clinical Epigenetics
  44. mGWAS-Explorer 2.0: Causal Analysis and Interpretation of Metabolite–Phenotype Associations
    Le Chang, Guangyan Zhou, Jianguo Xia · 2023 · Metabolites
  45. TTC22 promotes m6A-mediated WTAP expression and colon cancer metastasis in an RPL4 binding-dependent pattern
    You, Abin, Tian, Wei, Yuan, Hongfan, Gu, Liankun, Zhou, Jing, Deng, Dajun · 2022 · Oncogene
  46. The complexity of the cilium: spatiotemporal diversity of an ancient organelle
    Heydeck, Westley, Fievet, Lorraine, Davis, Erica E, Katsanis, Nicholas · 2018 · Current Opinion in Cell Biology
  47. Evaluation of the relationships of the WBP1L gene with schizophrenia and the general psychopathology scale based on a case–control study
    Fanglin Guan, Tong Ni, Wei Han, Huali Lin, Bo Zhang, Gang Chen, Li Zhu, Dan Liu, Tianxiao Zhang · 2019 · American Journal of Medical Genetics Part B Neuropsychiatric Genetics
  48. Network Pharmacology-Based Approach Combined with Bioinformatic Analytics to Elucidate the Potential of Curcumol against Hepatocellular Carcinoma
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  49. Replication of FTO gene associated with lean mass in a meta-analysis of genome-wide association studies
    Ran, Shu, Jiang, Zi-Xuan, He, Xiao, Liu, Yu, Zhang, Yu-Xue, Zhang, Lei, Pei, Yu-Fang, Zhang, Meng, Hai, Rong, Gu, Gui-Shan et al. · 2020 · Scientific Reports
  50. Formatting biological big data for modern machine learning in drug discovery
    Duran‐Frigola, Miquel, Fernández‐Torras, Adrià, Bertoni, Martino, Aloy, Patrick · 2019 · WIREs Computational Molecular Science
  51. Adenylyl cyclase type 9 gene polymorphisms are associated with asthma and allergy in Brazilian children
    Helena Mariana Pitangueira Teixeira, Neuza Maria Alcântara‐Neves, Maurício L. Barreto · 2017 · Molecular Immunology
  52. IRF2BPL gene mutation: Expanding on neurologic phenotypes
    Emily Shelkowitz, Jasleen Singh, Austin A Larson · 2019 · American Journal of Medical Genetics Part A
  53. Transcriptional Differences for COVID-19 Disease Map Genes between Males and Females Indicate a Different Basal Immunophenotype Relevant to the Disease
    Tianyuan Liu, Leandro Balzano‐Nogueira, Ana Lleò, Ana Conesa · 2020 · Genes
  54. Long Non-Coding RNA FENDRR: Gene Structure, Expression, and Biological Relevance
    Przemysław Szafrański, Paweł Stankiewicz · 2021 · Genes
  55. Approaches in Gene Coexpression Analysis in Eukaryotes
    Vasileios L. Zogopoulos, Georgia Saxami, Apostolos Malatras, Konstantinos A. Papadopoulos, Ioanna Tsotra, Vassiliki A. Iconomidou, Ioannis Michalopoulos · 2022 · Biology
  56. Association of glioma CD44 expression with glial dynamics in the tumour microenvironment and patient prognosis
    Zhanxin Du, Yaqing Wang, Jiaqi Liang, Shaowei Gao, Xiaoying Cai, Yu Yu, Zhihui Qi, Jing Li, Yubin Xie, Zhongxing Wang · 2022 · Computational and Structural Biotechnology Journal
  57. Longitudinal monitoring of cell-free DNA methylation in ALK-positive non-small cell lung cancer patients
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  58. The Genetics of Primary Biliary Cholangitis: A GWAS and Post-GWAS Update
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  59. Genome-Wide Association Studies of Estimated Fatty Acid Desaturase Activity in Serum and Adipose Tissue in Elderly Individuals: Associations with Insulin Sensitivity
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  60. Genetics and Genomics of Longitudinal Lung Function Patterns in Individuals with Asthma
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  61. Protocadherin 20 maintains intestinal barrier function to protect against Crohn’s disease by targeting ATF6
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  63. Personalised analytics for rare disease diagnostics
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  64. Maternal diabetes and incidence of childhood cancer – a nationwide cohort study and exploratory genetic analysis
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  65. An association analysis for genetic factors for dental caries susceptibility in a cohort of Chinese children
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  83. PCA062, a P-cadherin Targeting Antibody–Drug Conjugate, Displays Potent Antitumor Activity Against P-cadherin–expressing Malignancies
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  84. Associations of 2923 plasma proteins with incident inflammatory bowel disease in a prospective cohort study and genetic analysis
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  85. Multi-omics analyses of CD276 in pan-cancer reveals its clinical prognostic value in glioblastoma and other major cancer types
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  86. Analysis of age-dependent gene-expression in human tissues for studying diabetes comorbidities
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  87. Multivariate genome-wide association study of depression, cognition, and memory phenotypes and validation analysis identify 12 cross-ethnic variants
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  88. TRIM31 triggers colorectal carcinogenesis and progression by maintaining YBX1 protein stability through ubiquitination modification
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  89. A subtype of oral, laryngeal, esophageal, and lung, squamous cell carcinoma with high levels of TrkB-T1 neurotrophin receptor mRNA
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  90. mRNA for Body Fluid and Individual Identification
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  91. Genetic Variants of lncRNA GAS5 Are Associated with the Clinicopathologic Development of Oral Cancer
    Ming‐Hong Hsieh, Hsueh‐Ju Lu, Chiao‐Wen Lin · 2021 · Journal of Personalized Medicine
  92. Multi-omics pan-cancer analyses identify MCM4 as a promising prognostic and diagnostic biomarker
    Yanxing Li, Wentao Gao, Zhen Yang, Zhenwei Hu, Jianjun Li · 2024 · Scientific Reports
  93. The translation of cancer genomics: time for a revolution in clinical cancer care
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  94. Family-based genome-wide association study of autism spectrum disorder in middle eastern families
    Al-Sarraj, Yasser, Al-Dous, Eman, Taha, Rowaida Z., Ahram, Dina, Alshaban, Fouad, Tolfat, Mohammed, El-Shanti, Hatem, Albagha, Omar M.E. · 2021 · Genes
  95. Novel Genetic Variants in TP37, PIK3R1, CALM1, and PLCG2 of the Neurotrophin Signaling Pathway Are Associated with the Progression from Mild Cognitive Impairment to Alzheimer’s Disease
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  96. Spectrins and human diseases
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  97. Meta-analysis of ACE inhibitor-induced angioedema identifies novel risk locus.
    Mathey, Carina M., Maj, Carlo, Eriksson, Niclas, Krebs, Kristi, Westmeier, Julia, David, Friederike S., Koromina, Maria, Scheer, Annika B., Szabo, Nora, Wedi, Bettina et al. · 2024 · Journal of Allergy and Clinical Immunology
  98. NFAT5-Mediated Signalling Pathways in Viral Infection and Cardiovascular Dysfunction
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  99. Prognostic value of Glypican family genes in early-stage pancreatic ductal adenocarcinoma after pancreaticoduodenectomy and possible mechanisms
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  100. Genome-wide association studies of thyroid-related hormones, dysfunction, and autoimmunity among 85,421 Chinese pregnancies
    Yuandan Wei, Jianxin Zhen, Liang Hu, Yuqin Gu, Yanhong Liu, Xinxin Guo, Zijing Yang, Hao Zheng, Shiyao Cheng, Fengxiang Wei et al. · 2024 · Nature Communications