The Genotype-Tissue Expression (GTEx) project
Lonsdale, John, Thomas, Jeffrey, Salvatore, Mike, Phillips, Rebecca, Lo, Edmund, Shad, Saboor, Hasz, Richard, Walters, Gary +119 more·2013·Nature Genetics
DOI 10.1038/ng.2653
Cited by (488)
Items 101–200 of 488
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- Breast cancer risk variants at 6q25 display different phenotype associations and regulate ESR1, RMND1 and CCDC170EMBRACE, Dunning, Alison M, GEMO Study Collaborators, HEBON, kConFab Investigators, Michailidou, Kyriaki, Kuchenbaecker, Karoline B, Thompson, Deborah, French, Juliet D, Beesley, Jonathan et al. · 2016 · Nature Genetics
- World Endometriosis Research Foundation Endometriosis Phenome and Biobanking Harmonisation Project: IV. Tissue collection, processing, and storage in endometriosis researchFassbender, Amelie, Rahmioglu, Nilufer, Vitonis, Allison F., Viganò, Paola, Giudice, Linda C., D’Hooghe, Thomas M., Hummelshoj, Lone, Adamson, G. David, Becker, Christian M., Missmer, Stacey A. et al. · 2014 · Fertility and Sterility
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- Origins of De Novo Genes in Human and ChimpanzeeRuiz-Orera, Jorge, Hernandez-Rodriguez, Jessica, Chiva, Cristina, Sabidó, Eduard, Kondova, Ivanela, Bontrop, Ronald, Marqués-Bonet, Tomàs, Albà, M.Mar · 2015 · PLOS Genetics
- GWAS for executive function and processing speed suggests involvement of the CADM2 geneIbrahim-Verbaas, C A, Bressler, J, Debette, S, Schuur, M, Smith, A V, Bis, J C, Davies, G, Trompet, S, Smith, J A, Wolf, C et al. · 2016 · Molecular Psychiatry
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- Sex-Specific Role for the Long Non-coding RNA LINC00473 in DepressionIssler, Orna, van der Zee, Yentl Y., Ramakrishnan, Aarthi, Wang, Junshi, Tan, Chunfeng, Loh, Yong-Hwee E., Purushothaman, Immanuel, Walker, Deena M., Lorsch, Zachary S., Hamilton, Peter J. et al. · 2020 · Neuron
- Improving the diagnostic yield of exome- sequencing by predicting gene–phenotype associations using large-scale gene expression analysisDeelen, Patrick, van Dam, Sipko, Herkert, Johanna C., Karjalainen, Juha M., Brugge, Harm, Abbott, Kristin M., van Diemen, Cleo C., van der Zwaag, Paul A., Gerkes, Erica H., Zonneveld-Huijssoon, Evelien et al. · 2019 · Nature Communications
- An epigenome-wide association study of sex-specific chronological ageingMcCartney, Daniel L., Zhang, Futao, Hillary, Robert F., Zhang, Qian, Stevenson, Anna J., Walker, Rosie M., Bermingham, Mairead L., Boutin, Thibaud, Morris, Stewart W., Campbell, Archie et al. · 2020 · Genome Medicine
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- Evidence of CNIH3 involvement in opioid dependenceNelson, E C, Agrawal, A, Heath, A C, Bogdan, R, Sherva, R, Zhang, B, Al-Hasani, R, Bruchas, M R, Chou, Y-L, Demers, C H et al. · 2016 · Molecular Psychiatry
- A multimodal whole-slide foundation model for pathologyDing, Tong, Wagner, Sophia J., Song, Andrew H., Chen, Richard J., Lu, Ming Y., Zhang, Andrew, Vaidya, Anurag J., Jaume, Guillaume, Shaban, Muhammad, Kim, Ahrong et al. · 2025 · Nature Medicine
- Predicting drug-target interaction network using deep learning modelYou, Jiaying, McLeod, Robert D., Hu, Pingzhao · 2019 · Computational Biology and Chemistry
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- Inferring relevant cell types for complex traits by using single-cell gene expressionCalderon, Diego, Bhaskar, Anand, Knowles, David A., Golan, David, Raj, Towfique, Fu, Audrey Q., Pritchard, Jonathan K. · 2017 · The American Journal of Human Genetics
- miRNATissueAtlas2: an update to the human miRNA tissue atlasKeller, Andreas, Gröger, Laura, Tschernig, Thomas, Solomon, Jeffrey, Laham, Omar, Schaum, Nicholas, Wagner, Viktoria, Kern, Fabian, Schmartz, Georges Pierre, Li, Yongping et al. · 2022 · Nucleic Acids Research
- Precise reconstruction of the TME using bulk RNA-seq and a machine learning algorithm trained on artificial transcriptomesZaitsev, Aleksandr, Chelushkin, Maksim, Dyikanov, Daniiar, Cheremushkin, Ilya, Shpak, Boris, Nomie, Krystle, Zyrin, Vladimir, Nuzhdina, Ekaterina, Lozinsky, Yaroslav, Zotova, Anastasia et al. · 2022 · Cancer Cell
- Gene expression links functional networks across cortex and striatumAnderson, Kevin M., Krienen, Fenna M., Choi, Eun Young, Reinen, Jenna M., Yeo, B. T. Thomas, Holmes, Avram J. · 2018 · Nature Communications
- Muscarinic receptor subtype distribution in the central nervous system and relevance to aging and Alzheimer's diseaseEvan P. Lebois, Catherine A. Thorn, Jeremy R. Edgerton, Michael Popiolek, S. Xi · 2017 · Neuropharmacology
- NIH SenNet Consortium to map senescent cells throughout the human lifespan to understand physiological health.SenNet Consortium, Writing Group, Lee, Patty J., Benz, Christopher C., Blood, Philip, Börner, Katy, Campisi, Judith, Chen, Feng, Daldrup-Link, Heike, De Jager, Phil et al. · 2022 · Nature Aging
- Single-cell analysis of somatic mutations in human bronchial epithelial cells in relation to aging and smokingHuang, Zhenqiu, Sun, Shixiang, Lee, Moonsook, Maslov, Alexander Y., Shi, Miao, Waldman, Spencer, Marsh, Ava, Siddiqui, Taha, Dong, Xiao, Peter, Yakov et al. · 2022 · Nature Genetics
- Osteocyte transcriptome mapping identifies a molecular landscape controlling skeletal homeostasis and susceptibility to skeletal diseaseYoulten, Scott E., Kemp, John P., Logan, John G., Ghirardello, Elena J., Sergio, Claudio M., Dack, Michael R. G., Guilfoyle, Siobhan E., Leitch, Victoria D., Butterfield, Natalie C., Komla-Ebri, Davide et al. · 2021 · Nature Communications
- Identification of novel genome-wide associations for suicidality in UK Biobank, genetic correlation with psychiatric disorders and polygenic association with completed suicideStrawbridge, Rona J., Ward, Joey, Ferguson, Amy, Graham, Nicholas, Shaw, Richard J., Cullen, Breda, Pearsall, Robert, Lyall, Laura M., Johnston, Keira J.A., Niedzwiedz, Claire L. et al. · 2019 · EBioMedicine
- Casein kinase 1α: biological mechanisms and theranostic potentialJiang, Shaojie, Zhang, Miaofeng, Sun, Jihong, Yang, Xiaoming · 2018 · Cell Communication and Signaling
- Systematic analysis of gene expression patterns associated with postmortem interval in human tissuesZhu, Yizhang, Wang, Likun, Yin, Yuxin, Yang, Ence · 2017 · Scientific Reports
- Gene Regulatory Network Analysis Identifies Sex-Linked Differences in Colon Cancer Drug MetabolismCamila M. Lopes‐Ramos, Marieke L. Kuijjer, Shuji Ogino, Charles S. Fuchs, Dawn Lisa DeMeo, Kimberly Glass, John F Quackenbush · 2018 · Cancer Research
- A quantitative framework for characterizing the evolutionary history of mammalian gene expressionChen, Jenny, Swofford, Ross, Johnson, Jeremy, Cummings, Beryl B., Rogel, Noga, Lindblad-Toh, Kerstin, Haerty, Wilfried, Palma, Federica di, Regev, Aviv · 2019 · Genome Research
- GWAS and ExWAS of blood mitochondrial DNA copy number identifies 71 loci and highlights a potential causal role in dementiaMichael Chong, Pedrum Mohammadi‐Shemirani, Nicolas Perrot, Walter Nelson, Robert W. Morton, Sukrit Narula, Ricky Lali, Irfan I. Khan, Mohammad Daud Khan, Conor S. Judge et al. · 2022 · eLife
- Efficient Generation of Transcriptomic Profiles by Random Composite MeasurementsCleary, Brian, Cong, Le, Cheung, Anthea, Lander, Eric S., Regev, Aviv · 2017 · Cell
- Single-cell analysis reveals different age-related somatic mutation profiles between stem and differentiated cells in human liverBrazhnik, K., Sun, S., Alani, O., Kinkhabwala, M., Wolkoff, A. W., Maslov, A. Y., Dong, X., Vijg, J. · 2020 · Science Advances
- Harnessing big data to characterize immune-related adverse eventsJing, Ying, Yang, Jingwen, Johnson, Douglas B., Moslehi, Javid J., Han, Leng · 2022 · Nature Reviews Clinical Oncology
- Interpretable deep learning translation of GWAS and multi-omics findings to identify pathobiology and drug repurposing in Alzheimer’s diseaseXu, Jielin, Mao, Chengsheng, Hou, Yuan, Luo, Yuan, Binder, Jessica L., Zhou, Yadi, Bekris, Lynn M., Shin, Jiyoung, Hu, Ming, Wang, Fei et al. · 2022 · Cell Reports
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- From tissues to cell types and back: single-cell gene expression analysis of tissue architectureChen, Xi, Teichmann, Sarah A., Meyer, Kerstin B. · 2018 · Annual Review of Biomedical Data Science
- Sex-specific genetic predictors of Alzheimer’s disease biomarkersAlzheimer’s Disease Neuroimaging Initiative (ADNI), Deming, Yuetiva, The Alzheimer Disease Genetics Consortium (ADGC), Dumitrescu, Logan, Barnes, Lisa L., Thambisetty, Madhav, Kunkle, Brian, Gifford, Katherine A., Bush, William S., Chibnik, Lori B. et al. · 2018 · Acta Neuropathologica
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- Functional implications of Neandertal introgression in modern humansDannemann, Michael, Prüfer, Kay, Kelso, Janet · 2017 · Genome biology
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- On the origin of proteins in human drusen: The meet, greet and stick hypothesisBergen, Arthur A., Arya, Swati, Koster, Céline, Pilgrim, Matthew G., Wiatrek-Moumoulidis, Dagmara, van der Spek, Peter J., Hauck, Stefanie M., Boon, Camiel J.F., Emri, Eszter, Stewart, Alan J. et al. · 2019 · Progress in Retinal and Eye Research
- Stress and bronchodilator response in children with asthmaBrehm, John M., Ramratnam, Sima K., Tse, Sze Man, Croteau-Chonka, Damien C., Pino-Yanes, Maria, Rosas-Salazar, Christian, Litonjua, Augusto A., Raby, Benjamin A., Boutaoui, Nadia, Han, Yueh-Ying et al. · 2015 · American Journal of Respiratory and Critical Care Medicine
- The TMEM106B FTLD-protective variant, rs1990621, is also associated with increased neuronal proportionLi, Zeran, Farias, Fabiana H. G., Dube, Umber, Del-Aguila, Jorge L., Mihindukulasuriya, Kathie A., Fernandez, Maria Victoria, Ibanez, Laura, Budde, John P., Wang, Fengxian, Lake, Allison M. et al. · 2020 · Acta Neuropathologica
- Whole-genome sequence-based analysis of thyroid functionTaylor, Peter N., Porcu, Eleonora, Chew, Shelby, Campbell, Purdey J., Traglia, Michela, Brown, Suzanne J., Mullin, Benjamin H., Shihab, Hashem A., Min, Josine, Walter, Klaudia et al. · 2015 · Nature Communications
- Integrated functional genomic analyses of Klinefelter and Turner syndromes reveal global network effects of altered X chromosome dosageZhang, Xianglong, Hong, David, Ma, Shining, Ward, Thomas, Ho, Marcus, Pattni, Reenal, Duren, Zhana, Stankov, Atanas, Bade Shrestha, Sharon, Hallmayer, Joachim et al. · 2020 · Proceedings of the National Academy of Sciences
- Analytical tools and current challenges in the modern era of neuroepigenomicsMaze, Ian, Shen, Li, Zhang, Bin, Garcia, Benjamin A, Shao, Ningyi, Mitchell, Amanda, Sun, HaoSheng, Akbarian, Schahram, Allis, C David, Nestler, Eric J · 2014 · Nature Neuroscience
- Know your target, know your moleculeMark E. Bunnage, Adam M. Gilbert, Lyn H. Jones, Erik C. Hett · 2015 · Nature Chemical Biology
- Novel genetic loci affecting facial shape variation in humansXiong, Ziyi, Dankova, Gabriela, Howe, Laurence J, Lee, Myoung Keun, Hysi, Pirro G, de Jong, Markus A, Zhu, Gu, Adhikari, Kaustubh, Li, Dan, Li, Yi et al. · 2019 · eLife
- Identification of a regulatory variant that binds FOXA1 and FOXA2 at the CDC123/CAMK1D type 2 diabetes GWAS locusFogarty, Marie P., Cannon, Maren E., Vadlamudi, Swarooparani, Gaulton, Kyle J., Mohlke, Karen L. · 2014 · PLoS Genetics
- Mapping RNA splicing variations in clinically accessible and nonaccessible tissues to facilitate Mendelian disease diagnosis using RNA-seqJoseph K. Aicher, Paul D. Jewell, Jorge Vaquero-Garcia, Yoseph Barash, Elizabeth J. K. Bhoj · 2020 · Genetics in Medicine
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- GWAS of smoking behaviour in 165,436 Japanese people reveals seven new loci and shared genetic architectureMatoba, Nana, Akiyama, Masato, Ishigaki, Kazuyoshi, Kanai, Masahiro, Takahashi, Atsushi, Momozawa, Yukihide, Ikegawa, Shiro, Ikeda, Masashi, Iwata, Nakao, Hirata, Makoto et al. · 2019 · Nature Human Behaviour
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- Variants encoding a restricted carboxy-terminal domain of SLC12A2 cause hereditary hearing loss in humansHideki Mutai, Koichiro Wasano, Yukihide Momozawa, Yoichiro Kamatani, Fuyuki Miya, Sawako Masuda, Noriko Morimoto, Kiyomitsu Nara, Satoe Takahashi, Tatsuhiko Tsunoda et al. · 2020 · PLoS Genetics
- Epigenome-Wide Association Study of Cognitive Functioning in Middle-Aged Monozygotic TwinsStarnawska, Anna, Tan, Qihua, McGue, Matt, Mors, Ole, Børglum, Anders D., Christensen, Kaare, Nyegaard, Mette, Christiansen, Lene · 2017 · Frontiers in Aging Neuroscience
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