DADA2: High–resolution sample inference from Illumina amplicon data

Callahan, Benjamin J, McMurdie, Paul J, Rosen, Michael J, Han, Andrew W, Johnson, Amy Jo A, Holmes, Susan P·2016·Nature Methods

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Items 201–224 of 224

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    Xue, Zhengyao, Brooks, Jason T., Quart, Zachary, Stevens, Eric T., Kable, Mary E., Heidenreich, Jessie, McLeod, Jeremy, Marco, Maria L. · 2021 · mSystems
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    Brauer, Anne, Bengtsson, Mia M. · 2022 · MicrobiologyOpen
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    Isenring, Julia, Geirnaert, Annelies, Hall, Alex R., Jans, Christoph, Lacroix, Christophe, Stevens, Marc J. A. · 2021 · mSystems
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    Le Luyer, J., Schull, Q., Auffret, P., Lopez, P., Crusot, M., Belliard, C., Basset, C., Carradec, Q., Poulain, J., Planes, S. et al. · 2021 · Animal Microbiome
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    Graf, Martine, Choiselat, Estelle, Reay, Michaela K., Bargiela, Rafael, Dimitriou, Athanasios, Liu, Qiuyun, Elias, Robert M., Golyshin, Peter N., Griffiths, Robert, Chadwick, David R. et al. · 2025 · Journal of Hazardous Materials
  9. Stress-induced glucocorticoids enhance acute inflammation by promoting the differentiation of Th17 cells
    Shimba, Akihiro, Cui, Guangwei, Abe, Shinya, Hirota, Keiji, Miyauchi, Eiji, Takami, Daichi, Tani-ichi, Shizue, Kato, Ryoma, Tajima, Masaki, Kanahashi, Toru et al. · 2025 · Cell Reports
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  11. Effects of weight loss and feeding specially formulated diets on the body composition, blood metabolite profiles, voluntary physical activity, and fecal metabolites and microbiota of obese dogs
    Oba, Patrícia M, Kelly, Janelle, Kostiuk, Darcia, Swanson, Kelly S · 2023 · Journal of Animal Science
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    Thorel, Milan, Mateos-Hernandez, Lourdes, Mulot, Baptiste, Azzouni, Mouna Naila, Hodžić, Adnan, Gaillot, Hugues, Ruel, Yannick, Desoubeaux, Guillaume, Delaye, Jean-Baptiste, Obregon, Dasiel et al. · 2022 · Frontiers in Immunology
  13. A bibliometric analysis of studies on gut microbiota in attention-deficit and hyperactivity disorder from 2012 to 2021
    Zhao, Mingyi, Meng, Yang, Cao, Buzi, Tong, Jianbin, Liu, Xiaoying, Yan, Hao, Yang, Hanqi, Han, Houzhi, Liang, Xiaobing, Chen, Hui · 2023 · Frontiers in Microbiology
  14. Guild-based approach for mitigating information loss and distortion issues in microbiome analysis
    Zhao, Liping, Wu, Guojun, Zhao, Naisi · 2024 · Journal of Clinical Investigation
  15. Municipal separate storm sewer system (MS4) dry weather flows and potential flow sources as assessed by conventional and advanced bacterial analyses
    Li, Dong, Van De Werfhorst, Laurie C., Ervin, Jared, Poresky, Aaron, Steets, Brandon, Rivers, Cindy, Sharp, Grant, Smith, Jen, Holden, Patricia A. · 2023 · Environmental Pollution
  16. Chronic mesenteric ischemia-induced intestinal dysbiosis resolved after revascularization
    Munley, Jennifer A., Nagpal, Ravinder, Hanson, Nancy C., Mirzaie, Amin, Laquian, Liza, Mohr, Alicia M., Efron, Philip A., Arnaoutakis, Dean J., Cooper, Michol A. · 2023 · Journal of Vascular Surgery Cases, Innovations and Techniques
  17. Comprehensive profiling of smoked cheese from raw goat's milk handcrafted in Lower Silesia (Poland)
    Cardinali, Federica, Rampanti, Giorgia, Harasym, Joanna, Lucci, Paolo, Ferrocino, Ilario, Pacetti, Deborah, Fanesi, Benedetta, Milanović, Vesna, Garofalo, Cristiana, Petruzzelli, Annalisa et al. · 2025 · Food Research International
  18. Dynamics of Gut Metabolome and Microbiome Maturation during Early Life
    Aatsinki, Anna-Katariina, Lamichhane, Santosh, Isokääntä, Heidi, Sen, Partho, Kråkström, Matilda, Alves, Marina Amaral, Keskitalo, Anniina, Munukka, Eveliina, Karlsson, Hasse, Perasto, Laura et al. · 2023
  19. Dietary DNA Metabarcoding From Animal Fecal Samples
    McConnell, Rachel D., Jarrett, Crinan, Ferreira, Diogo F., Powell, Luke L., Quiñones, Alma L. S., Dominoni, Davide M., Welch, Andreanna J. · 2026 · Current Protocols
  20. Clinical Safety and Tolerability of <i>Bifidobacterium bifidum</i> BBi32: An 8‐Week Randomized, Double‐Blind, Placebo‐Controlled Trial With Genomic and In Vitro Corroboration
    Fang, Shuguang, Wang, Shanni, Liu, Yinhua, Zhu, Chengsheng, Wang, Sijia, Xu, Fei · 2026 · Food Science &amp; Nutrition
  21. Diversity and composition of gut microbiome of cervical cancer patients by 16S rRNA and whole-metagenome sequencing
    Biegert, Greyson, Karpinets, Tatiana, Wu, Xiaogang, Alam, Molly B. El, Sims, Travis T., Yoshida-Court, Kyoko, Lynn, Erica J., Yue, Jingyan, Medrano, Andrea Delgado, Petrosino, Joseph et al. · 2020
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    Parente, Eugenio, Zotta, Teresa, Ricciardi, Annamaria · 2022
  23. Effects of silver diamine fluoride on oral bacteriome and mycobiome: a randomized clinical trial
    Manerkar, Mayura, de Jesus, Vivianne Cruz, Mittermuller, Betty-Anne, Lee, Victor H. K., Singh, Sarbjeet, Bertone, Mary, Chelikani, Prashen, Schroth, Robert J. · 2025 · BMC Oral Health
  24. Weizmannia coagulans BC99 improved intestinal motility and chronic constipation through regulating gut microbiota: a randomized, double-blind, placebo-controlled trial
    Wu, Ying, Zhou, Yiqing, Fan, Qiuxia, Gao, Yinyin, Fang, Shuguang, Sun, Yukun, Gu, Shaobin · 2026 · European Journal of Nutrition