The Perseus computational platform for comprehensive analysis of (prote)omics data

Cited by (116)

Items 101–116 of 116

1. The Hidden Story of Heterogeneous B-raf V600E Mutation Quantitative Protein Expression in Metastatic Melanoma—Association with Clinical Outcome and Tumor Phenotypes
   Betancourt, Lazaro Hiram, Szasz, A. Marcell, Kuras, Magdalena, Rodriguez Murillo, Jimmy, Sugihara, Yutaka, Pla, Indira, Horvath, Zsolt, Pawłowski, Krzysztof, Rezeli, Melinda, Miharada, Kenichi et al. · 2019 · Cancers
2. Myeloid cell–specific loss of NPC1 in mice recapitulates microgliosis and neurodegeneration in patients with Niemann-Pick type C disease
   Dinkel, Lina, Hummel, Selina, Zenatti, Valerio, Malara, Mariagiovanna, Tillmann, Yannik, Colombo, Alessio, Monasor, Laura Sebastian, Suh, Jung H., Logan, Todd, Roth, Stefan et al. · 2024 · Science Translational Medicine
3. Nitric Oxide Resistance in Leishmania (Viannia) braziliensis Involves Regulation of Glucose Consumption, Glutathione Metabolism and Abundance of Pentose Phosphate Pathway Enzymes
   Pinho, Nathalia, Bombaça, Ana Cristina, Wiśniewski, Jacek R., Dias-Lopes, Geovane, Saboia-Vahia, Leonardo, Cupolillo, Elisa, de Jesus, José Batista, de Almeida, Roque P., Padrón, Gabriel, Menna-Barreto, Rubem et al. · 2022 · Antioxidants
4. Mycobacteria Tolerate Carbon Monoxide by Remodeling Their Respiratory Chain
   Bayly, Katherine, Cordero, Paul R. F., Kropp, Ashleigh, Huang, Cheng, Schittenhelm, Ralf B., Grinter, Rhys, Greening, Chris · 2021 · mSystems
5. The small CRL4CSA ubiquitin ligase component DDA1 regulates transcription-coupled repair dynamics
   Llerena Schiffmacher, Diana A., Lee, Shun-Hsiao, Kliza, Katarzyna W., Theil, Arjan F., Akita, Masaki, Helfricht, Angela, Bezstarosti, Karel, Gonzalo-Hansen, Camila, van Attikum, Haico, Verlaan-de Vries, Matty et al. · 2024 · Nature Communications
6. Comparative exoproteome analyses of Lactobacillus spp. reveals species-and strain-specific proteins involved in their extracellular interaction and probiotic potential
   Bagon, Bernadette B., Valeriano, Valerie Diane V., Oh, Ju Kyoung, Pajarillo, Edward Alain B., Cho, Chun-Sung, Kang, Dae-Kyung · 2018 · LWT
7. Comparison of the amyloid plaque proteome in Down syndrome, early‐onset Alzheimer's disease, and late‐onset Alzheimer's disease
   Martá-Ariza, Mitchell, Leitner, Dominique F., Kanshin, Evgeny, Suazo, Jianina, Giusti Pedrosa, Ana, Thierry, Manon, Lee, Edward B., Devinsky, Orrin, Drummond, Eleanor, Fortea, Juan et al. · 2025 · Acta Neuropathologica
8. Co-expression network analysis of human tau-transgenic mice reveals protein modules associated with tau-induced pathologies
   Tsumagari, Kazuya, Sato, Yoshiaki, Shimozawa, Aki, Aoyagi, Hirofumi, Okano, Hideyuki, Kuromitsu, Junro · 2022 · iScience
9. Absolute quantification of all identified plasma proteins from SWATH data for biomarker discovery
   Rice, Shawn J., Liu, Xin, Zhang, Jianhong, Belani, Chandra P. · 2019 · PROTEOMICS
10. Equine Herpesvirus type 1 modulates cytokine and chemokine profiles of mononuclear cells for efficient dissemination to target organs.
    Pavulraj, Selvaraj, Kamel, Mohamed, Stephanowitz, Heike, Liu, Fan, Plendl, Johanna, Osterrieder, Nikolaus, Azab, Walid · 2020 · Viruses
11. The structure of the Orm2-containing serine palmitoyltransferase complex reveals distinct inhibitory potentials of yeast Orm proteins
    Körner, Carolin, Schäfer, Jan-Hannes, Esch, Bianca M., Parey, Kristian, Walter, Stefan, Teis, David, Januliene, Dovile, Schmidt, Oliver, Moeller, Arne, Fröhlich, Florian · 2024 · Cell Reports
12. Mouse liver sinusoidal endothelial cell responses to the glucocorticoid receptor agonist dexamethasone
    Bhandari, Sabin, Kyrrestad, Ingelin, Simón-Santamaría, Jaione, Li, Ruomei, Szafranska, Karolina Joanna, Dumitriu, Gianina, Sánchez Romano, Javier, Smedsrød, Bård, Sørensen, Karen Kristine · 2024 · Frontiers in Pharmacology
13. Not aging but calorie restriction strongly affects protein oxidation in heart and brain mitochondria
    Fan, Shipan, Ramallo‐Guevara, Carina, Frenzel, Monika, Yanai, Shuichi, Goto, Sataro, Sugawa, Michiru D., Dencher, Norbert A., Poetsch, Ansgar · 2026 · Aging Cell
14. Adaptive evolution of Pseudomonas putida in the presence of fluoride exposes novel functions of a benzoate transporter
    Ets, Lea, Ilves, Heili, Juhe, Lisette, Ilmjärv, Tanel, Puiggené, Òscar, Nikel, Pablo Iván, Kivisaar, Maia · 2026 · Journal of Bacteriology
15. Tetramerisation governs SALL transcription factor function in development and disease
    Giuliani, Sara, Chhatbar, Kashyap, Wear, Martin, Guy, Jacky, Mathieson, Tricia, Burdett, Hayden, George, Lisa, Alston, Grace, Spanos, Christos, McHugh, Toni et al. · 2025 · bioRxiv
16. Disruption of hippocampal upstream regulators of mTOR and insulin pathways in Down syndrome with Alzheimer's disease neuropathology: Preliminary observations
    Nordbeck, Abigail J., Martá‐Ariza, Mitchell, Ek Olofsson, Henric, Kanshin, Evgeny, Ueberheide, Beatrix, Jones, Ken, Sanford, Bridget, Hamlett, Eric D., Head, Elizabeth, Mufson, Elliott J. et al. · 2026 · Alzheimer's & Dementia