Towards a holistic framework for multimodal LLM in 3D brain CT radiology report generation
Open accessPublished version of a preprint
Abstract
Abstract Multi-modal large language models (MLLMs) have been given free rein to explore exciting medical applications with a primary focus on radiology report generation. Nevertheless, the preliminary MLLM successful attempts in 2D medical image-text pair captioning are incompetent to reflect the real-world diagnostic challenge in the volumetric 3D anatomy. Toward deploying MLLM for more applicable diagnostic context, we noticed that the (1) scarcity of 3D image training dataset, (2) the direct use of undifferentiated foundation MLLMs, and (3) the lack of pertinent caption evaluation metrics were independent domain-specific constraints that integratively hobbles the iteration of next-generation medical MLLM research. In this regard, this study collected a 3D-BrainCT dataset (18,885 text-scan pairs) and applied clinical visual instruction tuning (CVIT) to train volumetric anatomy-sensible BrainGPT models to generate radiology-adherent 3D brain CT reports. Statistically, our BrainGPT model scored BLEU-1 = 44.35, BLEU-4 = 20.38, METEOR = 30.13, ROUGE-L = 47.6, and CIDEr-R = 211.77 during internal testing and demonstrated an accuracy of 0.91 in captioning midline shifts on the external validation CQ500 dataset. By further inspecting the captioned report, we reported that the traditional metrics appeared to measure only the surface text similarity and failed to gauge the information density of the diagnostic purpose. To close this gap, we proposed a novel Feature-Oriented Radiology Task Evaluation (FORTE) to estimate the clinical relevance (lesion feature and landmarks) of the report. Notably, the BrainGPT model scored an average FORTE 0.71 F1-score (degree=0.661; landmark=0.706; feature=0.693, and impression=0.779). To demonstrate that BrainGPT models possess objective readiness to generate human-like radiology reports, we conducted a Turing test that enrolled 11 physician evaluators, and around 74% of the BrainGPT-generated captions were indistinguishable from those written by humans. While various computational intelligence researchers have advocated the avant-garde MLLM applications, our work embodies a holistic framework that showcased the first-hand experience of curating a 3D brain CT dataset, fine-tuning anatomy-sensible language models, and proposing robust radiology evaluation metrics. We deemed that the adventure of docking MLLM for 3D brain CT report generation may unfold new MLLM applications at the forefront of human-machine collaborated modern healthcare.
AI snapshot
Written from the paper’s full text.
TL;DR
The paper introduces BrainGPT, a clinically visual instruction-tuned multimodal LLM for 3D brain CT radiology report generation, trained on the curated 3D-BrainCT dataset of 18,885 text-scan pairs. It also proposes FORTE, a feature-oriented evaluation scheme, and reports that BrainGPT achieves an average FORTE F1-score of 0.71, with 74% of generated reports indistinguishable from human-written ground truth in a Turing-like test.
Key findings
- BrainGPT-keyword achieved an average FORTE F1-score of 0.71 after negation removal, with category scores of 0.661 for degree, 0.706 for landmark, 0.693 for feature, and 0.779 for impression.
- In a Turing-like test with 11 physicians and 66 evaluations, 74.24% of BrainGPT-generated captions were mistakenly identified as human-written; when CT image context was provided, misidentification fell to 56%.
- On zero-shot external validation using CQ500 (n = 133), BrainGPT models reported mass effect with accuracy 0.71–0.75, midline shift 0.35–0.38, and hemorrhagic events 0.43–0.5; after negation removal, midline shift accuracy rose to 0.86–0.91 and hemorrhagic events to 0.59–0.61.
- FORTE correlated with DocLens LLM-as-a-judge scores (r = 0.78, p < 0.001) but traditional metrics correlated poorly with DocLens (r < 0.4, p < 0.001), supporting FORTE as a more clinically aligned evaluation.
Methods
- Design: retrospective development and evaluation of BrainGPT, an Otter-based multimodal LLM fine-tuned with regular visual instruction tuning (RVIT) or clinical visual instruction tuning (CVIT), using four instruction conditions: plain, example, template, and keyword.
- Data: 3D-BrainCT included 18,885 brain CT scans (742,501 slices) from 9,689 patients with Alzheimer’s Disease (mean age 82.59 years, SD 9.3; 56.4% male) at Taipei Veterans General Hospital, 2010–2022. Training used 365,928 slices from 15,238 scans of 7,747 patients; testing used 87,312 slices from 3,638 scans of 1,938 patients. External validation used CQ500 non-contrast CT scans (n = 133).
- Analysis: traditional language metrics (BLEU, METEOR, ROUGE-L, CIDEr-R), sentence pairing and negation removal preprocessing, FORTE keyword-category F1 scoring, DocLens LLM-as-a-judge, physician RADPEER-based ratings, and a linguistic-embedded Turing test.
Limitations
- The paper states this is a pilot volumetric brain CT captioning study with no counterpart MLLM module to benchmark, so SOTA-level efficacy cannot be fully justified.
- The paper states BrainGPT was trained on degeneration-oriented data and fails to capture malignant tumor and acute traumatic features in CQ500; it also did not test whether changing the model backbone could improve brain CT captioning.
- Evident from the text: the training data come from a single institution and an Alzheimer’s Disease-enriched elderly population, which may limit generalizability; the Turing test involved 11 physicians and 66 evaluations, a relatively small human evaluation sample.
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Claims the paper makes
0 of 46 cited sources checked · 0 supported · 0 flagged
- Findingown data
'No' was notably among the most frequently used words in BrainGPT reports, along with 'of,' 'and,' 'in,' and 'the.'
“we found that “no” was notably among the most frequently used words, along with “of,” “and,” “in,” and “the.””
Quote in the paperSubstantial claim - Findingown data
The baseline Otter model scored the lowest in BLEU-4 (0) and CIDEr-R (5.9) metrics.
“the baseline Otter model scored the lowest in the BLEU-4 (0) and CIDEr-R (5.9) metrics”
Quote in the paperSubstantial claim - Findingown data
Traditional LLM metrics failed to gauge the diagnostic quality of radiology report generation.
“While we notice that the traditional LLM metrics failed to gauge the diagnostic quality of the RRG”
- Also stated in: § Training BrainGPT with clinical visual instruction tuning · boosted
“we demonstrated that traditional metrics are inherently insensitive to the clinical essence of the generated radiology reports.”
Quote in the paperSubstantial claim- Rests on an assumption: The value of key radiology descriptors outweighs grammatical filler words.
- Also stated in: § Training BrainGPT with clinical visual instruction tuning · boosted
- Findingnone given
BrainGPT is a clinically visual instruction-tuned (CVIT) model designed for 3D CT radiology report generation.
“develop BrainGPT, a clinically visual instruction-tuned (CVIT) model designed for 3D CT RRG”
- Also stated in: § Introduction · plain
“We introduced a clinical visual instruction tuning (CVIT) concept that enhances medical domain knowledge of the open-source Otter foundation model.”
Quote in the paperSubstantial claim- Rests on an assumption: The utility of MLLM-based radiology report generation for 3D medical images remains largely unexplored.
- Rests on an assumption: Current single-slice CT image-text data is manually pre-selected from 3D data, so MLLMs are largely tested on definite-positive lesion-included images.
- Rests on an assumption: Testing MLLMs on definite-positive lesion-included images may result in a sharpshooter fallacy.
- Also stated in: § Introduction · plain
- Findingown data
No traditional metrics, except CIDEr-R, rated BrainGPT performance in accordance with the crescendo elaborateness of RVIT and CVIT.
“no traditional metrics, except CIDEr-R, rated the BrainGPT performance in accordance with the crescendo elaborateness of RVIT and CVIT”
Quote in the paperSubstantial claim
- Findingown data
The 3D-BrainCT dataset consists of 18,885 text-scan pairs.
“we curate the 3D-BrainCT dataset (18,885 text-scan pairs)”
- Also stated in: § Introduction · plain
“We curated a large-scale 3D-brainCT dataset (18,885 text-scan pairs)”
Quote in the paperSubstantial claim- Rests on an assumption: The utility of MLLM-based radiology report generation for 3D medical images remains largely unexplored.
- Rests on an assumption: Current single-slice CT image-text data is manually pre-selected from 3D data, so MLLMs are largely tested on definite-positive lesion-included images.
- Rests on an assumption: Testing MLLMs on definite-positive lesion-included images may result in a sharpshooter fallacy.
- Also stated in: § Introduction · plain
- Findingown data
The CIDEr-R score depicted the most prominent ascending trend across BrainGPT-plain (125.86), BrainGPT-example (132.38), BrainGPT-template (147.92), and BrainGPT-keyword (153.3).
“the CIDEr-R score depicted the most prominent ascending trend across the hierarchically fine-tuned BrainGPT-plain (125.86), BrainGPT-example (132.38), BrainGPT-template (147.92), and BrainGPT-keyword (153.3).”
Quote in the paperSubstantial claim - Findingown data
Negation removal increased average traditional metric scores: BLEU-1 = 29.25%, BLEU-2 = 34.9%, BLEU-3 = 50.54%, BLEU-4 = 57.26%, METEOR = 24.97%, ROUGE_L = 29.04%, CIDEr-R = 46.6%.
“The average score increases were as follows: BLEU-1 = 29.25%, BLEU-2 = 34.9%, BLEU3 = 50.54%, BLEU-4 = 57.26%, METEOR = 24.97%, ROUGE_L = 29.04%, CIDEr-R = 46.6%”
Quote in the paperSubstantial claim - Findingown data
The four FORTE domains had lower intracorrelations (r < 0.5, p < 0.001 compared with traditional metrics).
“the four FORTE domains (degree, landmark, feature, and impression) had lower intracorrelations (r < 0.5, p < 0.001 compared with traditional metrics).”
Quote in the paperSubstantial claim- Rests on an assumption: The value of key radiology descriptors outweighs grammatical filler words.
- Rests on an assumption: The brain lesion’s degree, size, and location are paramount for making precise diagnoses and guiding subsequent clinical decisions.
- Findingown data
74% of BrainGPT-generated reports were indistinguishable from human-written ground truth in a Turing-like test.
“74% of BrainGPT-generated reports were indistinguishable from human-written ground truth in a Turing-like test”
Quote in the paperSubstantial claim - Findingown data
BrainGPT-keyword maintained a high recall rate across varying frequencies of radiology keywords (y = 0.95x-1.18; r2 = 0.85).
“the BrainGPT-keyword (Fig. 4a: y = 0.95x-1.18; r2 = 0.85) maintained a high recall rate across varying frequencies of radiology keywords.”
Quote in the paperSubstantial claim - Findingown data
The score distribution indicated a significant linear correlation (r > 0.7) in BLEU-2, BLEU-3, BLEU-4, METEOR, and ROUGE-L after sentence pairing (p < 0.001).
“the score distribution indicated a significant linear correlation (two-sided Pearson correlation coefficient r > 0.7) in BLEU-2, BLEU-3, BLEU-4, METEOR, and ROUGE-L with statistical significance (p < 0.001).”
Quote in the paperSubstantial claim - Findingown data
All four fine-tuned BrainGPT models outperformed the baseline Otter model in traditional metrics.
“all of the four fine-tuned BrainGPT models outperformed the baseline Otter model in traditional metrics (Two-sided Wilcoxon signed-rank test p < 0.01”
Quote in the paperSubstantial claim - Findingown data
There is a positive correlation between advanced CVIT and increased traditional metric scores.
“we observed a positive correlation between advanced CVIT and increased traditional metric scores.”
Quote in the paperSubstantial claim - Findingown data
The CIDEr-R score gained a more positive shift from sentence pairing (r = 0.577).
“the CIDEr-R score gained a more positive shift from the process of sentence pairing (r = 0.577).”
Quote in the paperNot a substantial claim - Findingown data
The traditional metric scores for every BrainGPT model were significantly improved across most traditional metrics after sentence pairing (p < 0.001).
“The traditional metric scores for every BrainGPT model were significantly improved across most traditional metrics (p < 0.001”
Quote in the paperSubstantial claim - Findingown data
BrainGPT-keyword captured the most radiology details, with FORTE F1 scores of 0.548, 0.533, 0.574, and 0.649.
“the BrainGPT-keyword captured the most radiology details, with FORTE F1 scores of 0.548, 0.533, 0.574, and 0.649.”
Quote in the paperSubstantial claim- Rests on an assumption: The value of key radiology descriptors outweighs grammatical filler words.
- Rests on an assumption: The brain lesion’s degree, size, and location are paramount for making precise diagnoses and guiding subsequent clinical decisions.
- Findingown data
BrainGPT achieves an average FORTE F1-score of 0.71.
“BrainGPT achieves an average FORTE F1-score of 0.71”
Quote in the paperSubstantial claim- Rests on an assumption: The value of key radiology descriptors outweighs grammatical filler words.
- Rests on an assumption: The brain lesion’s degree, size, and location are paramount for making precise diagnoses and guiding subsequent clinical decisions.
- Findingown data
In another case, BrainGPT described a regressing chronic ICH and a periventricular angiopathic leukoencephalopathy with white matter hypodensity.
“In another case, BrainGPT described a regressing chronic ICH and a periventricular angiopathic leukoencephalopathy with white matter hypodensity.”
Quote in the paperNot a substantial claim - Findingown data
Considering 'Specificity or vagueness of details' increased the average success identification rate from 26.67% to 39.22%.
“considering “Specificity or vagueness of details” increased the average success identification rate from 26.67% to 39.22%.”
Quote in the paperSubstantial claim - Findingown data
Negation removal significantly increased reporting accuracy for midline shift (0.86-0.91) and hemorrhagic events (0.59-0.61) on CQ500.
“negation removal (aligning with differential diagnosis interest) significantly increased the reporting accuracy for midline shift (0.86–0.91) and hemorrhagic events (0.59–0.61).”
Quote in the paperSubstantial claim - Findingown data
The FORTE method encapsulates a broader medical semantic dimension than the relative unitary traditional metrics.
“This study performed Pearson correlation analysis across different evaluation metrics and reported that the FORTE method encapsulates a broader medical semantic dimension than the relative unitary traditional metrics.”
Quote in the paperSubstantial claim - Findingown data
Out of 66 evaluations, 74.24% of BrainGPT-generated captions were mistakenly identified as human-written.
“out of the 66 evaluations, 74.24% of the BrainGPT-generated captions were mistakenly identified as human-written.”
Quote in the paperSubstantial claim - Findingown data
BrainGPT mentioned keywords (e.g., ventricular enlargement, atrophy, infarction, and mass effect) in generated reports for CQ500 with frequencies similar to those of the training dataset (3D-BrainCT).
“BrainGPT mentioned keywords (e.g., ventricular enlargement, atrophy, infarction, and mass effect) in the generated reports for the CQ500 validation dataset with frequencies similar those of the training dataset (3D-BrainCT).”
Quote in the paperSubstantial claim - Findingown data
When the 'Familiarity and voice' factor was taken into account, the average success identification rate increased from 22.22% to 38.6%.
“when the “Familiarity and voice” factor was taken into account, the average success identification rate increased from 22.22% to 38.6%.”
Quote in the paperSubstantial claim - Findingown data
In some multi-lesional brain CTs, BrainGPT reports recognized distinct hemorrhage subtypes (contusion, intraventricular and subarachnoid hemorrhage) with sparse comprehension of lesion location (frontotemporal lobe).
“in some multi-lesional brain CTs, the BrainGPT reports could recognize distinct hemorrhage subtypes (contusion, intraventricular and subarachnoid hemorrhage) with a sparse comprehension of the lesion location (frontotemporal lobe).”
Quote in the paperNot a substantial claim - Findingown data
In the lacunar infarction case, BrainGPT-example accurately identified the hypodense old lacunar infarct in the putamen and thalamus regions.
“in the lacunar infarction case, the BrainGPT-example accurately identified the hypodense old lacunar infarct in the putamen and thalamus regions.”
Quote in the paperNot a substantial claim - Findingown data
Advanced CVIT models (BrainGPT-template and BrainGPT-keyword) generally outperformed RVIT fine-tuned models (BrainGPT-plain and BrainGPT-example) in diagnosing mass effect, hemorrhage, and midline shift on CQ500.
“in terms of diagnosing “mass effect,” “hemorrhage,” and “midline shift,” the advanced CVIT models (BrainGPT-template and BrainGPT-keyword) generally outperformed the RVIT fine-tuned models (BrainGPT-plain and BrainGPT-example).”
Quote in the paperSubstantial claim - Findingnone given
CVIT models (BrainGPT-template, BrainGPT-keyword) outperformed RVIT models in brain CT captioning.
“Echoing these studies, our CVIT models (BrainGPT-template, BrainGPT-keyword) outperformed RVIT models in brain CT captioning.”
Quote in the paperSubstantial claim - Findingown data
BrainGPT generated successful captions for brain lesions, including SDH at the right occipital region, SAH, and left uncal herniation.
“The model also generated successful captions for brain lesions, including SDH at the right occipital region, SAH, and left uncal herniation.”
Quote in the paperSubstantial claim - Findingown data
Integrating scan-text context into the Turing test led to more confident evaluations on the 5-point Likert scale (p < 0.01).
“integrating the scan-text context into the Turing test led to more confident evaluations on the 5-point Likert scale (p-value < 0.01).”
Quote in the paperSubstantial claim - Findingown data
BrainGPT exhibited an 'Interpretation Spree' behavior, providing off-target (but not hallucinated) diagnostic narrations from multiobject brain CT contexts.
“Additionally, we observed an “Interpretation Spree” behavior, where BrainGPT provided off-target (but not hallucinated) diagnostic narrations from multiobject brain CT contexts (detailed in Supplementary Table 3).”
Quote in the paperSubstantial claim - Findingcitation
Both the reviewer success rate and answer alternation reasons ('Suspicious wording' and 'Both not mentioning critical features') were associated with the writing style ('Familiarity and voice' and 'Specificity or vagueness of details') rather than the sentence-level writing quality and coherence.
“By adopting similar designs with objective linguistic criteria, we found that both the reviewer success rate and answer alternation reasons (“Suspicious wording” and “Both not mentioning critical features”) were associated with the writing style (“Familiarity and voice” and “Specificity or vagueness of details”) rather than the sentence-level writing quality and coherence34.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [34] Casal, J. E. & Kessler, M. Can linguists distinguish between ChatGPT/AI and human writing?: A study of research ethics and academic publishing. Res. Methods Appl. Linguist. 2, 100068 (2023). source
Not checked in the free run.
- Findingreasoning
We sampled 365,928 slices from 15,238 scans representing 7747 patients from a total of 597,335 slices from 15,247 scans representing 7751 patients for the training process.
“Since the Otter architecture requires image-text pair instances to be of the same size (24 slices), we sampled 365,928 slices from 15,238 scans representing 7747 patients from a total of 597,335 slices from 15,247 scans representing 7751 patients for the training process.”
Quote in the paperSubstantial claim - Findingcitation
We conducted multiple end-to-end visual instruction tuning processes on the multi-image mode Otter foundation model, enhancing its applicability to brain CT radiology features.
“To address the domain constraints of standard MLLM, we conducted multiple end-to-end visual instruction tuning processes on the multi-image mode Otter foundation model, enhancing its applicability to brain CT radiology features26,27.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [26] Liu, H., Li, C., Wu, Q. & Lee, Y. J. Visual instruction tuning. Adv. Neural. Inf. Process. Syst. 36, 34892–34916 (2023).
Not checked in the free run.
- cites [27] Li, B. et al. Otter: A Multi-Modal Model with In-Context Instruction Tuning. Preprint at https://ui.adsabs.harvard.edu/abs/2023arXiv230503726L (2023).
Not checked in the free run.
- Interpretationown data
Traditional metrics are inherently insensitive to the clinical essence of generated radiology reports.
“we demonstrated that traditional metrics are inherently insensitive to the clinical essence of the generated radiology reports.”
Quote in the paperSubstantial claim- Rests on an assumption: The value of key radiology descriptors outweighs grammatical filler words.
- Premisenone given
The uncategorized keyword list in CheXpert may not be transferable from one image modality to different modalities.
“the uncategorized keyword list in CheXpert may not be transferable from one image modality to different modalities”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [12] Yang, S. et al. Radiology report generation with a learned knowledge base and multi-modal alignment. Med. Image Anal. 86, 102798 (2023). source
Not checked in the free run.
- cites [25] Irvin, J. et al. CheXpert: a large chest radiograph dataset with uncertainty labels and expert comparison. Proc. AAAI Conf. Artif. Intell. 33, 590–597 (2019).
Not checked in the free run.
- Rests on an assumption: The value of key radiology descriptors outweighs grammatical filler words.
- Interpretationown data
FORTE addresses broader and distinct disease aspects than traditional metrics depict.
“This comparison indicated that the FORTE addresses broader and distinct disease aspects than those traditional metrics depict.”
Quote in the paperSubstantial claim- Rests on an assumption: The value of key radiology descriptors outweighs grammatical filler words.
- Rests on an assumption: The brain lesion’s degree, size, and location are paramount for making precise diagnoses and guiding subsequent clinical decisions.
- Premisereasoning
The 14-feature retrieval rates in CheXpert cannot reflect the multi-semantic context of disease nature over an extended clinical course.
“the 14-feature retrieval rates cannot reflect the multi-semantic context (inclusive or exclusive; progression or resolution; relative location and size) of the disease nature over an extended clinical course.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [12] Yang, S. et al. Radiology report generation with a learned knowledge base and multi-modal alignment. Med. Image Anal. 86, 102798 (2023). source
Not checked in the free run.
- cites [25] Irvin, J. et al. CheXpert: a large chest radiograph dataset with uncertainty labels and expert comparison. Proc. AAAI Conf. Artif. Intell. 33, 590–597 (2019).
Not checked in the free run.
- Rests on an assumption: The value of key radiology descriptors outweighs grammatical filler words.
- Premisecitation
Traditional evaluation metrics cannot capture the clinical essence of brain CT reports.
“traditional evaluation metrics, which are designed to evaluate short translation20,21, abstract summary tasks22, and common image captioning23 cannot capture the clinical essence of brain CT reports24.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [24] Liu, G. et al. Clinically Accurate Chest X-Ray Report Generation. In Proc. 4th Machine Learning for Healthcare Conference. 106, 249–269 (PMLR, 2019).
Not checked in the free run.
- Rests on an assumption: The value of key radiology descriptors outweighs grammatical filler words.
- Interpretationown data
Fine-grained, specialist-grade instruction design may optimize model outcomes for clinical captioning tasks.
“This suggests that fine-grained, specialist-grade instruction design may optimize model outcomes for clinical captioning tasks.”
Quote in the paperSubstantial claim - Study design and conductown data
Zero-shot external validation was conducted on the CQ500 brain CT dataset (n = 133).
“We conducted zero-shot external validation on the CQ500 brain CT dataset (n = 133) to assess BrainGPT’s ability to perform report captioning under generalized clinical conditions.”
Quote in the paperSubstantial claim - Interpretationreasoning
Negation removal resulted in depletion of mostly impression keywords.
“This may be due primarily to the fact that negation removal resulted in the depletion of mostly impression keywords.”
Quote in the paperNot a substantial claim - Premisecitation
Most recent LLM-based evaluation studies adopt sentence-level comparison when prompting GPT to adapt to the list-by-list nature of radiology reports.
“In recent LLM-based evaluation studies29,42–44, we found that (1) similar to the sentence pairing process of FORTE, most of them adopt sentence-level comparison when prompting GPT to adapt to the list-by-list nature of radiology reports”
Quote in the paperNot a substantial claim0 of 4 sources checked- cites [29] Xie, Y. et al. DocLens: Multi-aspect Fine-grained Medical Text Evaluation. In Proc. 62nd Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers), 649–679 (Association for Computational Linguistics, Bangkok, Thailand, 2024). source
Not checked in the free run.
- cites [42] Huang, A., Banerjee, O., Wu, K., Pontes Reis, E., Rajpurkar, P. FineRadScore: a radiology report line-by-line evaluation technique generating corrections with severity scores. Preprint at https://ui.adsabs.harvard.edu/abs/2024arXiv240520613H (2024).
Not checked in the free run.
- cites [43] Zambrano Chaves, J. M., et al. Towards a clinically accessible radiology foundation model: open-access and lightweight, with automated evaluation. Preprint at https://ui.adsabs.harvard.edu/abs/2024arXiv240308002Z (2024).
Not checked in the free run.
- cites [44] Bannur, S., et al. MAIRA-2: Grounded radiology report generation. Preprint at https://ui.adsabs.harvard.edu/abs/2024arXiv240604449B (2024).
Not checked in the free run.
- Interpretationcitation
The application gap in traditional metrics is attributed to surface-form similarity and lexicographic analytic restrictions.
“The application gap is attributed to surface-form similarity and lexicographic analytic restrictions41.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [41] Abbasian, M. et al. Foundation metrics for evaluating effectiveness of healthcare conversations powered by generative AI. NPJ Digital Med. 7, 82 (2024). source
Not checked in the free run.
- Interpretationown data
CVIT instructions act as a premodel rectifier, enhancing focus on valuable clinical etiologies.
“This suggests that CVIT instructions act as a premodel rectifier, enhancing the focus on valuable clinical etiologies.”
Quote in the paperSubstantial claim - Study design and conductown data
A Turing test was conducted with 11 physicians (2 radiologists, 2 neurologists, and 7 other licensed medical doctors) to determine whether 6 provided brain CT reports were written by machines or humans.
“we asked 11 physicians (2 radiologists, 2 neurologists, and 7 other licensed medical doctors) (Fig. 7a) to determine whether 6 provided brain CT reports (two lacunar infarcts, cortex atrophy, subdural hemorrhage, and midline shift) were written by machines or humans.”
Quote in the paperSubstantial claim - Interpretationown data
BrainGPT has potential to provide differential diagnoses for hemorrhages and hypodense image features.
“These multiobject, multislice caption reports demonstrated BrainGPT’s potential to provide differential diagnoses for hemorrhages and hypodense image features.”
Quote in the paperSubstantial claim - Interpretationreasoning
Fine-tuned open-source MLLMs can be instrumented for 3D medical image interpretation.
“By following these technical approaches, we demonstrated that the fine-tuned open-source MLLMs can be instrumented for 3D medical image interpretation.”
Quote in the paperSubstantial claim - Premisecitation
Hamamci et al.'s customized transformer model required 7 days of training on a single NVIDIA A100 GPU.
“However, their customized transformer model required 7 days of training on a single NVIDIA A100 GPU, whereas our BrainGPT model requires only 12 h of fine-tuning on two NVIDIA A100 GPUs.”
Quote in the paperSubstantial claim0 of 3 sources checked- cites [35] Ethem Hamamci, I., Er, S. & Menze, B. CT2Rep: automated radiology report generation for 3D medical imaging. In proc. Medical Image Computing and Computer Assisted Intervention – MICCAI 2024. LNCS 15012, 476–486 (Springer Nature, Switzerland, 2024). source
Not checked in the free run.
- cites [36] Miura, Y., Zhang, Y., Tsai, E. B., Langlotz, C. P. & Jurafsky, D. Improving factual completeness and consistency of image-to-text radiology report generation. In Proc. 2021 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies. (eds Toutanova, K. et al.) 5288–5304 (Association for Computational Linguistics, 2021). source
Not checked in the free run.
- cites [37] Nicolson, A., Dowling, J. & Koopman, B. Improving chest X-ray report generation by leveraging warm starting. Artif. Intell. Med. 144, 102633 (2023). source
Not checked in the free run.
- Interpretationreasoning
Traditional metrics are unfit for evaluating clinical captioning tasks.
“We also highlighted that traditional metrics are unfit for evaluating clinical captioning tasks.”
Quote in the paperNot a substantial claim - Interpretationown data
The SOTA-level performance of BrainGPT is attributed to the combined effects of RVIT and CVIT.
“While we did not modify the Otter model structure, we attribute the SOTA-level performance to the combined effects of RVIT and CVIT.”
Quote in the paperSubstantial claim - Interpretationown data
The improved coherence between DocLens scores and FORTE metrics following sentence pairing highlights the importance of sentence pairing preprocessing.
“The improved coherence between DocLens scores and FORTE metrics following the application of sentence pairing highlights the importance of this evaluation preprocessing step”
Quote in the paperNot a substantial claim - Interpretationreasoning
Reviewing actual image contexts helps human evaluators detect subtle differences between machine and human-written reports.
“This suggests that reviewing actual image contexts helps human evaluators detect subtle differences between machine and human-written reports”
Quote in the paperSubstantial claim - Premisecitation
The CQ500 dataset consists of 1154 available CT scans from 491 patients.
“The CQ500 dataset, consisting of 1154 available CT scans from 491 patients, was downloaded from the Qure.ai website51.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [51] Chilamkurthy, S. et al. Deep learning algorithms for detection of critical findings in head CT scans: a retrospective study. Lancet 392, 2388–2396 (2018). source
Not checked in the free run.
- Study design and conductreasoning
Only non-contrast CT scans with slice numbers between 23 and 40 were selected to build the external validation dataset (n = 133).
“Only non-contrast CT scans with slice numbers between 23 and 40 were selected to build the external validation dataset (n = 133).”
Quote in the paperSubstantial claim - Interpretationreasoning
The training material may prime the dexterity of the resultant module.
“This phenomenon reflects that the training material may prime the dexterity of the resultant module49.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [49] Youssef, A. et al. External validation of AI models in health should be replaced with recurring local validation. Nat. Med. 29, 2686–2687 (2023). source
Not checked in the free run.
- Study design and conductnone given
We applied external validation to ensure the caption validity in the brain CT module.
“First, this is a pilot volumetric brain CT captioning study that has no counterpart MLLM module to benchmark, and hence we cannot justify the efficacy at the SOTA level; however, we applied external validation to ensure the caption validity in the brain CT module.”
Quote in the paperSubstantial claim
- May combine two claims. 43
- Classified as probably not a substantial claim. 33
May combine two claims.
Findingown dataSentence pairing increased traditional metric scores by an average of 5.28 points in METEOR, 6.48 points in ROUGE-L, and 114 points in CIDEr-R.
“the process of sentence pairing increased traditional metric scores by an average of 5.28 points in METEOR, 6.48 points in ROUGE-L, and an astonishing 114 points in CIDEr-R”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataThe baseline Otter model had a low recall rate for keywords, whereas BrainGPT models after visual instruction tuning demonstrated significant radiology keyword usage in image captioning.
“We found that the baseline Otter model had a low recall rate for keywords, whereas the BrainGPT models, after visual instruction tuning, demonstrated significant radiology keyword usage in image captioning.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataTraditional metrics had high intracorrelations (r > 0.7, p < 0.001), but a lower correlation with FORTE (r < 0.5, p < 0.001).
“traditional metrics had high intracorrelations (r > 0.7, p < 0.001), but a lower correlation with the FORTE (r < 0.5, p < 0.001).”
Quote in the paperSubstantial claim- Rests on an assumption: The value of key radiology descriptors outweighs grammatical filler words.
- Rests on an assumption: The brain lesion’s degree, size, and location are paramount for making precise diagnoses and guiding subsequent clinical decisions.
May combine two claims.
Findingown dataBrainGPT's reports were overlaid with excessive negative descriptions rather than concise, context-specific language used by radiologists, a phenomenon termed 'Interpretation spree.'
“BrainGPT’s reports were overlaid with excessive negative descriptions rather than the concise, context-specific language used by radiologists, a phenomenon we termed the “Interpretation spree.””
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataBrainGPT achieves FORTE F1-scores of 0.661 for degree, 0.706 for landmark, 0.693 for feature, and 0.779 for impression.
“(degree = 0.661; landmark = 0.706; feature = 0.693, and impression = 0.779)”
Quote in the paperSubstantial claim- Rests on an assumption: The value of key radiology descriptors outweighs grammatical filler words.
- Rests on an assumption: The brain lesion’s degree, size, and location are paramount for making precise diagnoses and guiding subsequent clinical decisions.
Classified as probably not a substantial claim.
Findingnone givenFORTE is an evaluation scheme that captures the clinical essence of generated reports.
“we propose feature-oriented radiology task evaluation (FORTE), an evaluation scheme that captures the clinical essence of the generated reports”
Quote in the paperSubstantial claim- Rests on an assumption: The value of key radiology descriptors outweighs grammatical filler words.
- Rests on an assumption: The brain lesion’s degree, size, and location are paramount for making precise diagnoses and guiding subsequent clinical decisions.
May combine two claims.
Findingown dataAdvanced CVIT models, BrainGPT-template and BrainGPT-keyword, scored higher average FORTE F1 scores than RVIT models did (Wilcoxon p < 0.05 in most categories).
“the advanced CVIT models, BrainGPT-template and BrainGPT-keyword, scored higher average F1 scores than the RVIT models did. (Wilcoxon signed-rank test p-value < 0.05 in most categories”
Quote in the paperSubstantial claim- Rests on an assumption: The value of key radiology descriptors outweighs grammatical filler words.
- Rests on an assumption: The brain lesion’s degree, size, and location are paramount for making precise diagnoses and guiding subsequent clinical decisions.
May combine two claims.
Findingown dataThe four instruction-tuned BrainGPT models achieved accuracy in reporting mass effects (0.71-0.75), midline shifts (0.35-0.38), and hemorrhagic events (0.43-0.5) on CQ500.
“the four instruction-tuned BrainGPT models achieved fair accuracy in reporting mass effects (0.71-0.75), midline shifts (0.35-0.38), and hemorrhagic events (0.43-0.5).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataThe initial FORTE evaluation showed all keyword categories were present in 20.9-27.4% of BrainGPT-generated reports, whereas the number decreased to 3.3-6.2% after negation removal.
“The initial FORTE evaluation showed all keyword categories were present in 20.9–27.4% of the BrainGPT-generated reports, whereas the number decreased to 3.3–6.2% after negation removal.”
Quote in the paperSubstantial claimMay combine two claims.
FindingcitationWithin the FORTE framework, BrainGPT achieves an F1 score of 0.589, comparable to the state-of-the-art (SOTA) performance in general medical disease identification, which reports an accuracy of 59.2% in prior benchmark studies.
“Within the FORTE framework, BrainGPT achieves a commendable performance with an F1 score of 0.589, comparable to the state-of-the-art (SOTA) performance in general medical disease identification, which reports an accuracy of 59.2% in prior benchmark studies45.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [45] Liu, J., et al. A Spectrum evaluation benchmark for medical multi-modal large language models. Preprint at https://ui.adsabs.harvard.edu/abs/2024arXiv240211217L (2024).
Not checked in the free run.
May combine two claims.
Findingown dataDocLens had a moderate correlation with human expert opinion in terms of 'Diagnostic Accuracy', and a mild correlation in the remaining rated items.
“we also noted a moderate correlation between DocLens and human expert opinion in terms of “Diagnostic Accuracy”, and a mild correlation in the remaining rated items.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Findingreasoning'Putamen' was misspelled as 'putmen,' likely due to a typo learned from the original training report.
““putamen” was misspelled as “putmen,” likely due to a typo learned from the original training report.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataBrainGPT requires only 12 h of fine-tuning on two NVIDIA A100 GPUs, achieving 3 epochs.
“However, their customized transformer model required 7 days of training on a single NVIDIA A100 GPU, whereas our BrainGPT model requires only 12 h of fine-tuning on two NVIDIA A100 GPUs.”
- Also stated in: § Clinical visual instruction tuning (CVIT) · plain
“The training duration for each resulting model was 12 h on two NVIDIA A100 GPUs, achieving 3 epochs.”
Quote in the paperSubstantial claim- Also stated in: § Clinical visual instruction tuning (CVIT) · plain
May combine two claims.
FindingcitationFORTE has moderate to high correlation with both human expert assessments and DocLens scores.
“This is further evidenced by its moderate to high correlation with both human expert assessments and DocLens scores25.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [25] Irvin, J. et al. CheXpert: a large chest radiograph dataset with uncertainty labels and expert comparison. Proc. AAAI Conf. Artif. Intell. 33, 590–597 (2019).
Not checked in the free run.
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Findingown dataWhen CT input context was provided to evaluators, 18% of the misidentification was reduced, resulting in a 56% incidence of mistakes machine-written as human-written reports.
“When CT input context was provided to the evaluators, 18% of the misidentification was reduced, resulting a 56% incidence of mistakes machine-written as human-written reports.”
Quote in the paperSubstantial claimMay combine two claims.
Findingreasoning'Degree and landmark' was present in 29.3-35.3% of BrainGPT-generated reports, whereas the number increased to 41.6-55% after negation removal.
““degree and landmark” was present in 29.3–35.3% of the BrainGPT-generated reports, whereas the number increased to 41.6–55% after negation removal.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataNegation removal led to an overall average F1 score gain of 0.153, with BrainGPT-keyword F1 score rising from 0.576 to 0.71.
“Negation removal led to an overall average F1 score gain of 0.153, with the best instruction-tuned model, BrainGPT-keyword, seeing its F1 score rise from 0.576 to 0.71.”
Quote in the paperSubstantial claim- Rests on an assumption: The value of key radiology descriptors outweighs grammatical filler words.
- Rests on an assumption: The brain lesion’s degree, size, and location are paramount for making precise diagnoses and guiding subsequent clinical decisions.
May combine two claims.
Findingown dataDocLens claim precision scores and FORTE scores were similar pre-visual instruction tuning (0.102 vs 0.102) and post-visual instruction tuning (0.589 vs 0.539).
“by comparing the DocLens claim precision scores and the FORTE scores in the status pre- (0.102 vs 0.102) and post-visual instruction tuning (0.589 vs 0.539)”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataDocLens is highly correlated with FORTE (r = 0.78, p < 0.001), but poorly correlated with traditional metrics (r < 0.4, p < 0.001).
“Doclens is highly correlated with FORTE (r = 0.78, p-value < 0.001), but is poorly correlated with traditional metrics (r < 0.4, p-value < 0.001).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataNegation removal improved BrainGPT FORTE keyword average F1 score by 0.118 for degrees, 0.194 for landmarks, 0.139 for features, and 0.163 for impressions.
“negation removal improved the BrainGPT FORTE keyword average F1 score by 0.118 for degrees, 0.194 for landmarks, 0.139 for features, and 0.163 for impressions”
Quote in the paperSubstantial claim- Rests on an assumption: The value of key radiology descriptors outweighs grammatical filler words.
- Rests on an assumption: The brain lesion’s degree, size, and location are paramount for making precise diagnoses and guiding subsequent clinical decisions.
May combine two claims.
FindingcitationTraits of 'Familiarity and voice' (29%), 'Specificity or vagueness of details' (37.60%), 'Continuity and Coherence' (33.33%), and 'Writing quality at sentence level' (33.33%) were significant factors when medical experts attribute a human origin behind a radiology report.
“traits of “Familiarity and voice” (29%), “Specificity or vagueness of details” (37.60%), “Continuity and Coherence” (33.33%), and “Writing quality at sentence level” (33.33%) were significant factors when medical experts attribute a human origin behind a radiology report”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [34] Casal, J. E. & Kessler, M. Can linguists distinguish between ChatGPT/AI and human writing?: A study of research ethics and academic publishing. Res. Methods Appl. Linguist. 2, 100068 (2023). source
Not checked in the free run.
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FindingcitationBrainGPT uses an end-to-end open-source Otter framework (CLIP ViT-L/14 vision encoder and LlaMA-7B), which allows for experimental replication and checkpoint sharing.
“In contrast, our BrainGPT uses an end-to-end open-source Otter framework (CLIP ViT-L/14 vision encoder39 and LlaMA-7B40), which allows for experimental replication and checkpoint sharing.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [39] Radford, A. et al. Learning transferable visual models from natural language supervision. In International conference on machine learning. (PmLR, 2021).
Not checked in the free run.
- cites [40] Touvron, H. et al. LLaMA: open and efficient foundation language models. Preprint at https://ui.adsabs.harvard.edu/abs/2023arXiv230213971T (2023).
Not checked in the free run.
May combine two claims.
FindingreasoningThe dataset includes images of normal brains, past infarcts that still show manifestations, chronic brain conditions, and acute brain lesions.
“Since Alzheimer’s Disease is a progressive degenerative condition predominantly seen in the elderly, the dataset includes images of normal brains, past infarcts that still show manifestations, chronic brain conditions, and acute brain lesions.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataWe collected 18,885 brain CT scans (742,501 slices) from 9689 patients with Alzheimer's Disease (mean age = 82.59 years [standard deviation = 9.3 years]; 56.4% male) at Taipei Veterans General Hospital in Taipei, Taiwan, between January 1, 2010, and December 31, 2022.
“We collected 18,885 brain CT scans (742,501 slices) from 9689 patients with Alzheimer’s Disease (mean age = 82.59 years [standard deviation = 9.3 years]; 56.4% male) at Taipei Veterans General Hospital in Taipei, Taiwan, between January 1, 2010, and December 31, 2022.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Findingown dataInput case imbalance can influence the caption writing style, potentially related to the over-fitting observed during general model training.
“Interestingly, we observed that input case imbalance can influence the caption writing style, potentially related to the over-fitting observed during general model training (see also Supplementary Fig. 4).”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
Findingown dataThe CT images included a variety of common neurology conditions affecting the skull, brain parenchyma, nasal sinuses, and the eye, and were collected by radiologists who routinely obtain CT images and write image reports based on the images and the patient's medical records.
“The CT images included a variety of common neurology conditions affecting the skull, brain parenchyma, nasal sinuses, and the eye, and were collected by radiologists who routinely obtain CT images and write image reports based on the images and the patient’s medical records.”
Quote in the paperNot a substantial claimClassified as probably not a substantial claim.
Findingnone givenThe system was tested on 87,312 slices sampled from 145,166 slices of 3638 CT scans representing 1938 patients.
“The system was then tested on 87,312 slices sampled from 145,166 slices of 3638 CT scans representing 1938 patients.”
Quote in the paperSubstantial claimMay combine two claims.
FindingreasoningBrainGPT is trained on degeneration-oriented data and thus it fails to capture the malignant tumor and acute traumatic features in CQ500.
“Second, BrainGPT is trained on degeneration-oriented data and thus it fails to capture the malignant tumor and acute traumatic features in CQ500.”
Quote in the paperSubstantial claimMay combine two claims.
Interpretationown dataClinical instruction-tuned BrainGPT models generate brain CT reports with a higher level of radiology term usage and better alignment with original diagnostic reports.
“These collective results indicate that clinical instruction-tuned BrainGPT models generate brain CT reports with a higher level of radiology term usage and better alignment with original diagnostic reports.”
Quote in the paperSubstantial claim- Rests on an assumption: The value of key radiology descriptors outweighs grammatical filler words.
- Rests on an assumption: The brain lesion’s degree, size, and location are paramount for making precise diagnoses and guiding subsequent clinical decisions.
Probably not a substantial claim: may not pass S4 (based).
Interpretationnone givenThere are no generalized evaluation metrics available to gauge MLLM report information density and fidelity.
“there are no generalized evaluation metrics available to gauge MLLM report information density and fidelity”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S4 (based).
Interpretationnone givenThe utmost model capacity was not fully tested in interpreting volumetric scans.
“the utmost model capacity was not fully tested in interpreting volumetric scans”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S4 (based).
Interpretationnone givenThe most studied CXR modality lacks sufficient lesion diversity to reflect real-world diagnostic challenges.
“the most studied CXR modality lacks sufficient lesion diversity to reflect real-world diagnostic challenges”
Quote in the paperNot a substantial claimMay combine two claims.
InterpretationreasoningThe Interpretation Spree behavior is detrimental because off-target effects may exclude the primary disease focus and expanded narration may dilute traditional metrics, leading to invalid evaluations.
“This behavior is detrimental because (1) off-target effects may exclude the primary disease focus (e.g., stroke or brain tumor), and (2) expanded narration may dilute traditional metrics, leading to invalid evaluations.”
Quote in the paperSubstantial claimMay combine two claims.
Interpretationown dataBrainGPT generated accurate and informative radiologic reports, and FORTE effectively denotes the medical essence within the report.
“In conclusion, BrainGPT generated accurate and informative radiologic reports, whilst the proposed FORTE effectively denotes the medical essence within the report.”
Quote in the paperSubstantial claim- Rests on an assumption: The value of key radiology descriptors outweighs grammatical filler words.
- Rests on an assumption: The brain lesion’s degree, size, and location are paramount for making precise diagnoses and guiding subsequent clinical decisions.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationDocLens mentioned the importance of the evaluation method to discriminate 'there is a focal lesion' from 'there is no focal lesion'.
“(2) in coherence with the issue raised in our negation removal session, Doclens29 mentioned the importance of the evaluation method to discriminate “there is a focal lesion” from “there is no focal lesion””
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [29] Xie, Y. et al. DocLens: Multi-aspect Fine-grained Medical Text Evaluation. In Proc. 62nd Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers), 649–679 (Association for Computational Linguistics, Bangkok, Thailand, 2024). source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
Interpretationown dataThe FORTE framework is customizable and transferable across various medical tasks with no focus restrain.
“Moreover, the FORTE framework is customizable and transferable across various medical tasks with no focus restrain, an interchangeable categorized keyword bank was provided as keyword JSON files on our GitHub page, some examples were demonstrated for chest X-ray, low-dose computed tomography (LDCT), abdomen CT, and Brain CT tasks.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationGenerative models are competent in 3D chest CT report generation at the state-of-the-art level (BLEU-1 = 46, BLEU-4 = 36.9, METEOR = 29.5, ROUGE-L = 45.9).
“Recent work by Hamamci et al. revealed that generative models are competent in 3D chest CT report generation at the state-of-the-art (SOTA) level (BLEU-1 = 46, BLEU-4 = 36.9, METEOR = 29.5, ROUGE-L = 45.9)35–37.”
Quote in the paperNot a substantial claim0 of 3 sources checked- cites [35] Ethem Hamamci, I., Er, S. & Menze, B. CT2Rep: automated radiology report generation for 3D medical imaging. In proc. Medical Image Computing and Computer Assisted Intervention – MICCAI 2024. LNCS 15012, 476–486 (Springer Nature, Switzerland, 2024). source
Not checked in the free run.
- cites [36] Miura, Y., Zhang, Y., Tsai, E. B., Langlotz, C. P. & Jurafsky, D. Improving factual completeness and consistency of image-to-text radiology report generation. In Proc. 2021 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies. (eds Toutanova, K. et al.) 5288–5304 (Association for Computational Linguistics, 2021). source
Not checked in the free run.
- cites [37] Nicolson, A., Dowling, J. & Koopman, B. Improving chest X-ray report generation by leveraging warm starting. Artif. Intell. Med. 144, 102633 (2023). source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationEvery recent LLM-based evaluation study aims to establish a more clinically precise, explainable, and generalizable metric.
“(3) most importantly, ranging from sentence-level precision and recall to error counting, every study aims to establish a more clinically precise, explainable, and generalizable metric.”
Quote in the paperNot a substantial claim0 of 4 sources checked- cites [29] Xie, Y. et al. DocLens: Multi-aspect Fine-grained Medical Text Evaluation. In Proc. 62nd Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers), 649–679 (Association for Computational Linguistics, Bangkok, Thailand, 2024). source
Not checked in the free run.
- cites [42] Huang, A., Banerjee, O., Wu, K., Pontes Reis, E., Rajpurkar, P. FineRadScore: a radiology report line-by-line evaluation technique generating corrections with severity scores. Preprint at https://ui.adsabs.harvard.edu/abs/2024arXiv240520613H (2024).
Not checked in the free run.
- cites [43] Zambrano Chaves, J. M., et al. Towards a clinically accessible radiology foundation model: open-access and lightweight, with automated evaluation. Preprint at https://ui.adsabs.harvard.edu/abs/2024arXiv240308002Z (2024).
Not checked in the free run.
- cites [44] Bannur, S., et al. MAIRA-2: Grounded radiology report generation. Preprint at https://ui.adsabs.harvard.edu/abs/2024arXiv240604449B (2024).
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationRelated works have instrumented quantitative (completeness, correctness, conciseness) and qualitative (content, language, structure) measurements to distinguish synthesized clinical reports from human reports.
“Therefore, related works have instrumented quantitative (completeness, correctness, conciseness) and qualitative (content, language, structure) measurements to dissect the riveting characters that distinguish synthesized clinical reports from human reports46–49.”
Quote in the paperNot a substantial claim0 of 4 sources checked- cites [46] Van Veen, D., et al. Adapted large language models can outperform medical experts in clinical text summarization. Nat. Med. 30, 1134–1142 (2024). source
Not checked in the free run.
- cites [47] Yan, B. et al. Style-Aware Radiology Report Generation with RadGraph and Few-Shot Prompting. In Findings of the Association for Computational Linguistics: EMNLP 2023. 14676–14688 (Association for Computational Linguistics, Singapore, 2023). source
Not checked in the free run.
- cites [48] Boag W., Kané H., Rawat S., Wei J. & Goehler A. A Pilot Study in Surveying Clinical Judgments to Evaluate Radiology Report Generation. In: Proceedings of the 2021 ACM Conference on Fairness, Accountability, and Transparency (Association for Computing Machinery, 2021). source
Not checked in the free run.
- cites [49] Youssef, A. et al. External validation of AI models in health should be replaced with recurring local validation. Nat. Med. 29, 2686–2687 (2023). source
Not checked in the free run.
Classified as probably not a substantial claim.
Interpretationnone givenThe study assembled a holistic framework to address unmet needs and achieve robust report generation for 3D brain CT.
“In this study, we assembled a holistic framework to address various unmet needs and achieve robust report generation for 3D brain CT.”
Quote in the paperSubstantial claim- Rests on an assumption: There are unmet needs in 3D brain CT report generation.
Probably not a substantial claim: may not pass S4 (based).
InterpretationreasoningThe high computational cost of using large-scale Google TPUv4 accelerator pods makes this approach infeasible for general research with limited resources.
“The high computational cost of using large-scale Google TPUv4 accelerator pods makes this approach infeasible for general research with limited resources.”
Quote in the paperNot a substantial claimMay combine two claims.
PremisecitationGoogle AI's Med-Gemini-3D can perform 3D CT report generation, but only 53% of its reports are considered clinically valid in human evaluations.
“Additionally, Google AI’s Med-Gemini-3D can perform 3D CT report generation, but only 53% of its reports are considered clinically valid in human evaluations38.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [38] Yang, L. et al. Advancing multimodal medical capabilities of Gemini. Preprint at https://ui.adsabs.harvard.edu/abs/2024arXiv240503162Y (2024).
Not checked in the free run.
May combine two claims.
Interpretationown dataThe reduced training cost of BrainGPT enables efficient visual instruction tuning, enhancing model performance and tailoring responses to specialized or stylistic requirements.
“Moreover, the reduced training cost of BrainGPT enables efficient visual instruction tuning, enhancing model performance and tailoring responses to specialized or stylistic requirements (Supplementary Table 5).”
Quote in the paperSubstantial claimMay combine two claims.
Interpretationown dataNegation removal allowed evaluation metrics to focus on positive findings, enhanced average traditional scores and FORTE F1 scores, and avoided sparse and off-topic impressions in reports.
“Together, we demonstrated that negation removal allowed evaluation metrics to focus on positive findings, enhanced average traditional scores and FORTE F1 scores, and avoided sparse and off-topic impressions in reports.”
Quote in the paperSubstantial claim- Rests on an assumption: The value of key radiology descriptors outweighs grammatical filler words.
May combine two claims.
Interpretationnone givenFORTE served as an evaluation framework that consists of sentence-pairing, negation removal, and 4-category keyword extraction, which coherently restricts model hallucination, enhances the interpretation convergence, and provides instant radiology impressions for healthcare providers.
“To this end, FORTE served as an evaluation framework that consists of sentence-pairing, negation removal, and 4-category keyword extraction, which coherently restricts model hallucination, enhances the interpretation convergence, and provides instant radiology impressions for healthcare providers.”
Quote in the paperSubstantial claimClassified as probably not a substantial claim.
Study design and conductown dataA 10-point Likert scale rating by 2 physicians reading 50 random sampled captions was constructed.
“we constructed a 10-point Likert scale rating by 2 physicians reading 50 random sampled captions.”
Quote in the paperSubstantial claimMay combine two claims.
Interpretationown dataTraditional metrics fall short of addressing semantic complexity in medical reports, and FORTE scoring works as efficiently as state-of-the-art DocLens evaluation but in a computation-light manner.
“our results demonstrated that traditional metrics fall short of addressing the semantic complexity in medical reports, and the FORTE scoring concept work as efficient as the state-of-the-art DocLens evaluation but in a computation-light manner.”
Quote in the paperSubstantial claimMay combine two claims.
PremisecitationMedical image reports assist in differential diagnosis and are characterized by complex paraphrasing, high token counts (>100), and numerous negative descriptions, which conflict with common metric evaluation contexts.
“Medical image reports assist in differential diagnosis and thus are characterized by complex paraphrasing, high token counts (>100), and numerous negative descriptions, which conflict with common metric evaluation contexts24,41.”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [24] Liu, G. et al. Clinically Accurate Chest X-Ray Report Generation. In Proc. 4th Machine Learning for Healthcare Conference. 106, 249–269 (PMLR, 2019).
Not checked in the free run.
- cites [41] Abbasian, M. et al. Foundation metrics for evaluating effectiveness of healthcare conversations powered by generative AI. NPJ Digital Med. 7, 82 (2024). source
Not checked in the free run.
Classified as probably not a substantial claim. May combine two claims.
Study design and conductown dataThe physician survey was composed of six caption pairs, each comprising a BrainGPT report and a radiologist report, including diverse disease instances such as lacunar infarct, subdural hemorrhage, brain atrophy, and midline (cerebral falx) shift.
“The physician survey was composed of six caption pairs, each comprising a BrainGPT report and a radiologist report. These examples included diverse disease instances including lacunar infarct, subdural hemorrhage, brain atrophy, and midline (cerebral falx) shift, thereby encompassing a range of both acute and chronic cerebral alterations for expert evaluation.”
Quote in the paperSubstantial claimClassified as probably not a substantial claim. May combine two claims.
PremisecitationBERT embeddings capture rich semantic information and are widely recognized as effective for sentence similarity tasks.
“Previous literature showed the BERT embeddings54 capture rich semantic information and are widely recognized as effective for sentence similarity tasks55–57.”
Quote in the paperSubstantial claim0 of 4 sources checked- cites [54] Devlin, J., Chang, M.-W., Lee, K. & Toutanova, K. Bert: Pre-training of deep bidirectional transformers for language understanding. In Proc. 2019 conference of the North American chapter of the association for computational linguistics: human language technologies, Vol 1 (long and short papers) (Association for Computational Linguistics, 2019).
Not checked in the free run.
- cites [55] Feng, F., Yang, Y., Cer, D., Arivazhagan, N. & Wang, W. Language-agnostic BERT Sentence Embedding. In Proc. 60th Annual Meeting of the Association for Computational Linguistics, Vol 1 (Long Papers), 878–891. (Association for Computational Linguistics, Dublin, Ireland, 2022) source
Not checked in the free run.
- cites [56] Li, B. et al. On the Sentence Embeddings from Pre-trained Language Models. In Proc. 2020 Conference on Empirical Methods in Natural Language Processing (EMNLP). 9119–9130 Online. (Association for Computational Linguistics, 2020). source
Not checked in the free run.
- cites [57] Ethayarajh, K. How Contextual are Contextualized Word Representations? Comparing the Geometry of BERT, ELMo, and GPT-2 Embeddings. In Proc. 2019 Conference on Empirical Methods in Natural Language Processing and the 9th International Joint Conference on Natural Language Processing (EMNLP-IJCNLP). 55–65 (Association for Computational Linguistics, Hong Kong, China, 2019). source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationThe significance of the medical report writing style was also highlighted in an independent prompting study.
“The significance of the medical report writing style was also highlighted in an independent prompting study47.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [47] Yan, B. et al. Style-Aware Radiology Report Generation with RadGraph and Few-Shot Prompting. In Findings of the Association for Computational Linguistics: EMNLP 2023. 14676–14688 (Association for Computational Linguistics, Singapore, 2023). source
Not checked in the free run.
Classified as probably not a substantial claim. May combine two claims.
InterpretationreasoningSentence pairing releases the sequential constraints of disease descriptors, and negation removal reduces the false positives in evaluation reports.
“By these means, sentence pairing releases the sequential constraints of disease descriptors, and negation removal reduces the false positives in evaluation reports.”
Quote in the paperSubstantial claimClassified as probably not a substantial claim. May combine two claims.
Study design and conductown dataWe averaged the reports for each reporter, yielding 27 reporter averages, to minimize the influence of reporter writing style.
“To minimize the influence of reporter writing style (as demonstrated in Supplementary Fig. 4), we averaged the reports for each reporter, yielding 27 reporter averages.”
Quote in the paperSubstantial claimMay combine two claims.
Study design and conductreasoningThis is a pilot volumetric brain CT captioning study that has no counterpart MLLM module to benchmark, and hence we cannot justify the efficacy at the SOTA level.
“First, this is a pilot volumetric brain CT captioning study that has no counterpart MLLM module to benchmark, and hence we cannot justify the efficacy at the SOTA level; however, we applied external validation to ensure the caption validity in the brain CT module.”
Quote in the paperNot a substantial claimClassified as probably not a substantial claim.
PremisecitationWe utilized the DocLens metric, which employs GPT-4o mini to extract claims from generated reports, verify their presence in ground-truth reports, and compute a precision score for the generated content.
“For the LLM-as-a-judge evaluation, we utilized the DocLens metric, which employs GPT-4o mini to extract claims from generated reports, verify their presence in ground-truth reports, and compute a precision score for the generated content.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [29] Xie, Y. et al. DocLens: Multi-aspect Fine-grained Medical Text Evaluation. In Proc. 62nd Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers), 649–679 (Association for Computational Linguistics, Bangkok, Thailand, 2024). source
Not checked in the free run.
Classified as probably not a substantial claim. May combine two claims.
Study design and conductnone givenGround truth was based on a read.csv file from the CQ500 dataset, and the majority rule was applied among the three raters to summarize the 'Mass effect,' 'Hemorrhage event,' and 'Midline shift' labels.
“Ground truth was based on a read.csv file from the CQ500 dataset, and the majority rule was applied among the three raters to summarize the “Mass effect,” “Hemorrhage event,” and “Midline shift” labels.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductnone givenIntraclass correlation coefficients (ICCs) were calculated to measure the reliability of human evaluations across these criteria.
“Intraclass correlation coefficients (ICCs) were calculated to measure the reliability of human evaluations across these criteria.”
Quote in the paperNot a substantial claimClassified as probably not a substantial claim.
Study design and conductnone givenRADPEER scores were dichotomized using arithmetic means as thresholds to compute Cohen's kappa coefficients with DocLens scores.
“Additionally, RADPEER scores were dichotomized using arithmetic means as thresholds to compute Cohen’s kappa coefficients with DocLens scores.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Interpretationnone givenWe provided the FORTE keyword JSON files for the Brain CT, chest X-ray, low-dose computed tomography (LDCT), and abdomen CT on our project GitHub page to demonstrate the generalizability of FORTE in facilitating the next generation of medical LLM.
“We provided the FORTE keyword JSON files for the Brain CT, chest X-ray, low-dose computed tomography (LDCT), and abdomen CT on our project GitHub page to demonstrate the generalizability of FORTE in facilitating the next generation of medical LLM.”
Quote in the paperNot a substantial claimClassified as probably not a substantial claim.
Interpretationnone givenWe proposed the feature-oriented radiology task evaluation (FORTE) framework to capture radiology keywords in terms of Degree (size and intensity), Landmark (location and anatomy), Feature (disease traits and primary findings), and Impression (final diagnosis) of the disease.
“We proposed the feature-oriented radiology task evaluation (FORTE) framework to capture radiology keywords in terms of Degree (size and intensity), Landmark (location and anatomy), Feature (disease traits and primary findings), and Impression (final diagnosis) of the disease.”
Quote in the paperSubstantial claim- Rests on an assumption: The FORTE keyword categories (Degree, Landmark, Feature, Impression) adequately capture the clinical essence of radiology reports.
Probably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductreasoningInformed consent was exempted due to the retrospective nature of the data collection and the use of deidentified CT images.
“Informed consent was exempted due to the retrospective nature of the data collection and the use of deidentified CT images.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationCosine similarity is widely recognized as an effective generation metric and applied in the CheXbert vector similarity metric.
“Cosine similarity, which measures the token-level contextual embeddings of reference and candidate sentences, is widely recognized as an effective generation metric and applied in the CheXbert vector similarity metric58.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [58] Yu, F. et al. Evaluating progress in automatic chest X-ray radiology report generation. Patterns 4, 100802 (2023). source
Not checked in the free run.
Probably not a substantial claim: may not pass S4 (based). May combine two claims.
Study design and conductreasoningThis ensures that slice thickness and details are similar to our training dataset and fit in the Otter framework.
“This ensures that slice thickness and details are similar to our training dataset and fit in the Otter framework.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
InterpretationreasoningThe FORTE keyword list includes synonyms, allowing the system to recognize a broader array of related terms that may appear in different contexts, addressing the challenge of lexical variability inherent in clinical reports.
“This list is not just a compilation of keywords but also includes synonyms, allowing the system to recognize a broader array of related terms that may appear in different contexts, addressing the challenge of lexical variability inherent in clinical reports.”
Quote in the paperNot a substantial claimClassified as probably not a substantial claim.
Study design and conductnone givenAll data were collected under institutional review board approval (2023-10-002 BC) of the Taipei Veterans General Hospital.
“All data were collected under institutional review board approval (2023-10-002 BC) of the Taipei Veterans General Hospital.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationThe 'sentence pairing' process was inspired by BERTScore, which leverages contextual embeddings and cosine similarity to achieve better semantic matching than traditional n-gram-based methods.
“The “sentence pairing” process was inspired by BERTScore, which leverages contextual embeddings and cosine similarity to achieve better semantic matching than traditional n-gram-based methods53.”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [53] Zhang, T., Kishore, V., Wu, F., Weinberger, K. Q., Artzi, Y. Bertscore: Evaluating text generation with bert. arXiv preprint arXiv:190409675, (2019).
Not checked in the free run.
The paper relies on this without support.
The utility of MLLM-based radiology report generation for 3D medical images remains largely unexplored.
“While 2D MLLM-based RRG has been well established, its utility for 3D medical images remains largely unexplored.”
The paper relies on this without support.
Current single-slice CT image-text data is manually pre-selected from 3D data, so MLLMs are largely tested on definite-positive lesion-included images.
“current single-slice CT image-text data is manually pre-selected from a 3D data, thus the MLLM is largely tested under a definite-positive lesion-included image.”
The paper relies on this without support.
Testing MLLMs on definite-positive lesion-included images may result in a sharpshooter fallacy.
“This may result in a sharpshooter fallacy in the MLLM testing.”
The paper relies on this without support.
The value of key radiology descriptors outweighs grammatical filler words.
“Therefore, the value of key radiology descriptors outweighs grammatical filler words.”
The paper relies on this without support.
The brain lesion’s degree, size, and location are paramount for making precise diagnoses and guiding subsequent clinical decisions.
“The brain lesion’s degree, size, and location of a brain lesion are paramount for making forming precise diagnoses and guiding subsequent clinical decisions.”
The paper relies on this without support.
There are unmet needs in 3D brain CT report generation.
“In this study, we assembled a holistic framework to address various unmet needs and achieve robust report generation for 3D brain CT.”
The paper relies on this without support.
The FORTE keyword categories (Degree, Landmark, Feature, Impression) adequately capture the clinical essence of radiology reports.
“We proposed the feature-oriented radiology task evaluation (FORTE) framework to capture radiology keywords in terms of Degree (size and intensity), Landmark (location and anatomy), Feature (disease traits and primary findings), and Impression (final diagnosis) of the disease.”
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Specialist agents such as BrainGPT for 3D CT scans, HistoGPT for histopathology images, and scChat for single-cell sequencing data can be easily integrated into the MoMA workflow.
“For example, specialist agents such as BrainGPT66 for 3D CT scans, HistoGPT67 for histopathology images, and scChat68 for single-cell sequencing data can be easily integrated into the MoMA workflow when these modalities are involved.”
From MoMA: a mixture-of-multimodal-agents architecture for enhancing clinical prediction modelling (2025) · cites this paper as [66]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
Each contradiction between two passages listed here was confirmed by an independent check.
Turing test used six versus seven report pairs
MinorThe Figure 7 caption says physicians evaluated seven report pairs, while the Methods section says the survey contained six caption pairs. The reported 66 evaluations also matches 11 physicians evaluating six pairs, not seven.
“Specifically, eleven physicians were asked to distinguish the model-generated report from seven selected report pairs.”
“The physician survey was composed of six caption pairs, each comprising a BrainGPT report and a radiologist report.”
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“This list is not merely a compilation of keywords but also includes synonyms, enabling the system to recognize a broader array of related terms that may appear in different contexts.”
Language-agnostic BERT Sentence Embedding
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“This list is not merely a compilation of keywords but also includes synonyms, enabling the system to recognize a broader array of related terms that may appear in different contexts.”
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Generating Radiology Reports via Memory-driven Transformer
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On the Sentence Embeddings from Pre-trained Language Models
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Self-citationLLaVA-Med: Training a Large Language-and-Vision Assistant for Biomedicine in One Day
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“15,16 However, during testing, the brain CT data is presented in a 3D format, which poses challenges for the MLLM to identify the specific slice containing the lesion of interest precisely in situ .”
Self-citationTowards Generalist Biomedical AI
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Towards Generalist Biomedical AI
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Self-citationA deep learning system for predicting time to progression of diabetic retinopathy
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Otter: A Multi-Modal Model With In-Context Instruction Tuning
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Self-citationFoundation metrics for evaluating effectiveness of healthcare conversations powered by generative AI
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Evaluating progress in automatic chest X-ray radiology report generation
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“For each identified keyword, the system retrieves its primary representative or returns the keyword itself if no such representative exists.”
Radiology report generation with a learned knowledge base and multi-modal alignment
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External validation of AI models in health should be replaced with recurring local validation
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“38 Hence, we suggest enrolling diverse disease etiologies with the aim of differential diagnosis to improve MLLM generalization on border brain CT features.”
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“Crucially, MLLMs must be capable of multi-image reasoning or video understanding when used to generate reports for real-world 3D data.”
Self-citationCT2Rep: Automated Radiology Report Generation for 3D Medical Imaging
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Advancing Multimodal Medical Capabilities of Gemini
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“…as based on the work of Singhal et al.; 27 BrainGPT-template was fine-tuned using template instruction, involving a structured and predefined set of questions or points that need to be addressed; BrainGPT-keyword was fine-tuned using keyword instruction, focusing on essential areas or…”
Style-Aware Radiology Report Generation with RadGraph and Few-Shot Prompting
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“Then, we examined the caption efficacy by (1) adapting traditional evaluation metrics (2) proposing a clinical-oriented FORTE metric, (3) applying an external validation CQ500, and (4) conducting the linguistic-embedded Turing test.”
Unity in Diversity: Collaborative Pre-training Across Multimodal Medical Sources
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A Pilot Study in Surveying Clinical Judgments to Evaluate Radiology Report Generation
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“To 35-37 By adopting similar designs with objective linguistic criteria, we found that both reviewer success rate and answer alternation reasons (“Suspicious wording” and “Both not mentioning critical features”) were associated with the writing style (“Familiarity and voice” and "Specificity or…”
Shen, L., Shen, L., Lin, J., et al. (2023) · arXiv (Cornell University) · doi:10.48550/arxiv.2312.08078 · Cited by 5 · cited 1× · see citing works
“Crucially, MLLMs must be capable of multi-image reasoning or video understanding when used to generate reports for real-world 3D data.”
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Multimodal Large Language Models in Medical Imaging: Current State and Future Directions
Nam, Y., Kim, D., Kyung, S., Seo, J., Song, J. M., Kwon, J., Kim, J., Jo, W., Park, H. J., Sung, J., et al. (2025) · Korean Journal of Radiology · doi:10.3348/kjr.2025.0599 · Cited by 106 · see citing works
“Despite these obstacles, research in 3D medical MLLM has gained momentum, driven by pressing clinical needs and supported by the emergence of large-scale 3D medical image-text datasets [44,45].”
Application of large language models in disease diagnosis and treatment
Yang, X., Li, T., Su, Q., Liu, Y., Kang, C., Lyu, Y., Zhao, L., Nie, Y., & Pan, Y. (2024) · Chinese Medical Journal · doi:10.1097/cm9.0000000000003456 · Cited by 68 · see citing works
Vision-language foundation model for 3D medical imaging
Wu, J., Wang, Y., Zhong, Z., Liao, W., Trayanova, N., Jiao, Z., & Bai, H. X. (2025) · npj Artificial Intelligence · doi:10.1038/s44387-025-00015-9 · Cited by 41 · see citing works
The performance of large language models in dentomaxillofacial radiology: a systematic review
Liu, Z., Nalley, A., Hao, J., Ai, Q. Y. H., Yeung, A. W. K., Tanaka, R., & Hung, K. F. (2025) · Dentomaxillofacial Radiology · doi:10.1093/dmfr/twaf060 · Cited by 31 · see citing works
Large Language Model With Region-Guided Referring and Grounding for CT Report Generation
Chen, Z., Bie, Y., Jin, H., & Chen, H. (2025) · IEEE Transactions on Medical Imaging · doi:10.1109/tmi.2025.3559923 · Cited by 24 · see citing works
Rapid review: Growing usage of Multimodal Large Language Models in healthcare
Gupta, P., Zhang, Z., Song, M., Michalowski, M., Hu, X., Štiglic, G., & Topaz, M. (2025) · Journal of Biomedical Informatics · doi:10.1016/j.jbi.2025.104875 · Cited by 23 · see citing works
Intelligent generation of 3D disassembly processes driven by multimodal large language models
Zhao, Y., Chen, L., Yu, H., & Zheng, Y. (2026) · Journal of Manufacturing Systems · doi:10.1016/j.jmsy.2026.04.032 · Cited by 13 · see citing works
Self-citationvon der Stück, M. S., Vuskov, R., Westfechtel, S. D., et al. (2026) · Life · doi:10.3390/life16010066 · Cited by 15 · see citing works
“Their ability to integrate multimodal information has fueled expectations that they may support or even partially automate radiologic image interpretation [2,3].”
A survey on large language models driven meta-optimizers for automated intelligent optimization
Zheng, Y., Zhang, L., Li, K., Wang, R., Li, W.-H., Zhang, T., Zhang, Q.-F., & Jin, Y.-C. (2026) · Artificial Intelligence Review · doi:10.1007/s10462-025-11470-w · Cited by 15 · see citing works
“These limitations involve parameter sensitivity, premature convergence, and deficient cross-domain generalization (Cheng et al. 2025 ; Li et al. 2025d ).”
InfluentialHallucinations in medical devices
Granstedt, J., Prabhat, K. C., Deshpande, R., Garcia, V. L., & Badano, A. G. (2025) · Artificial Intelligence in the Life Sciences · doi:10.1016/j.ailsci.2025.100145 · Cited by 15 · see citing works
Pan, X., Bai, Y., Zou, K., Zhou, Y., Zhou, J., Fu, H., Tham, Y. C., & Liu, Y. (2025) · Information Fusion · doi:10.1016/j.inffus.2025.103631 · Cited by 7 · see citing works
“These models exhibit strong performance in addressing complex medical queries based on multimodal inputs [4, 5], generating structured medical reports from raw clinical data [6, 7], and recommending personalized treatment plans grounded in patients’ genetic profiles and clinical histories [8, 9].”
Lu, M., Wu, J. C., Lu, H. H.-S., Eslam, M., & Yu, M. (2025) · Gut and Liver · doi:10.5009/gnl250268 · Cited by 8 · see citing works
“120 LLMs can power conversational agents that explain diagnoses, treatment plans, or lifestyle modifications in accessible language.”
Gertz, R. J., Beste, N. C., Dratsch, T., Lennartz, S., Bremm, J., Iuga, A.-I., Bunck, A. C., Laukamp, K. R., Schönfeld, M. H., & Kottlors, J. (2025) · European Radiology · doi:10.1007/s00330-025-11929-y · Cited by 5 · see citing works
Med-2E3: A 2D-Enhanced 3D Medical Multimodal Large Language Model
Shi, Y., Zhu, X., Wang, K., Hu, Y., Guo, C., Li, M., & Wu, J. (2025) · IEEE International Conference on Bioinformatics and Biomedicine (BIBM) · doi:10.1109/bibm66473.2025.11357048 · Cited by 9 · see citing works
“Some researchers have begun to extend the 2D MLLM paradigm to the 3D domain [14]–[19].”
Trustworthy Medical Imaging with Large Language Models: A Study of Hallucinations Across Modalities
Das, A. B., Sakib, S. K., & Ahmed, S. (2025) · IEEE International Conference on Computer Vision Workshops · doi:10.1109/iccvw69036.2025.00136 · Cited by 7 · see citing works
“A key finding here is midline shift [19], indicating displacement of brain structures due to mass effect from hemorrhage, tumor, or swelling.”
Gao, Q., Jin, Y., Sun, Y., Jin, M., Tang, L., Chen, Y., She, Y., & Li, M. (2026) · Diagnostics · doi:10.3390/diagnostics16050752 · Cited by 7 · see citing works
“This challenge is exacerbated by the intricacies of harmonizing complex, multimodal data streams—a systemic limitation analogously observed in the deployment of multimodal large language models [68].”
Self-citationRoumeliotis, K. I., Tselikas, N. D., & Nasiopoulos, D. Κ. (2025) · IEEE Access · doi:10.1109/access.2025.3579420 · Cited by 5 · see citing works
Foundation models in medical imaging: A review
Chen, Q., Liu, A., Zhang, J., Yang, C., & Zhang, Y. (2026) · EngMedicine · doi:10.1016/j.engmed.2026.100123 · Cited by 4 · see citing works
Self-citationAutomated cardiac magnetic resonance interpretation derived from prompted large language models
Wang, L., Peng, L., Wan, Y., Li, X., Chen, Y., Wang, L., Gong, X., Zhao, X., Yu, L., Zhao, S., et al. (2025) · Cardiovascular Diagnosis and Therapy · doi:10.21037/cdt-2025-112 · Cited by 4 · see citing works
“Multiple recent studies have demonstrated that LLMs could reliably extract actionable information from radiology reports and effectively integrate complex medical data (23-25).”
Self-citationWang, L., & Yang, G. (2025) · Sensors · doi:10.3390/s25206459 · Cited by 3 · see citing works
“…operationalises a form of learnable query, key, and value interaction between clinical and movement features [59,60], consistent with the direction of modern multimodal medical AI [61], where attention replaces static concatenation to capture complementary cues and suppress noise better [62].”
GTGM: Generative Text-Guided 3D Vision-Language Pretraining for Medical Image Segmentation
Chen, Y., Liu, C., Huang, W., Liu, X., Shi, H., Cheng, S. L., Arcucci, R., & Xiong, Z. (2025) · IEEE International Conference on Computer Vision Workshops · doi:10.1109/iccvw69036.2025.00699 · Cited by 3 · see citing works
“We further incorporate the 3D-BrainCT dataset [41], comprising 18,885 text-scan pairs for brain CT radiology.”
Self-citationFsBAD: Data-efficient feature reconstruction for few-shot brain anomaly detection
Madni, H. A., Shujat, H., Nardin, A. D., Zottin, S., & Foresti, G. L. (2025) · Pattern Recognition Letters · doi:10.1016/j.patrec.2025.11.016 · Cited by 2 · see citing works
Li, K., Wang, C., Xiong, Y., Song, Y., Zhang, Y., 牟丹蕾, Hu, C., Guo, D., Mei, T., Li, A., et al. (2026) · Frontiers in Oncology · doi:10.3389/fonc.2026.1710529 · Cited by 2 · see citing works
Precision oncology: from large language models to multi-agent systems
Guo, X., Chen, J., Zhang, Y., Zhang, X., Lu, J., Qin, Q., Chen, J., Gao, X., & Wang, J. (2026) · Frontiers in Oncology · doi:10.3389/fonc.2026.1828507 · Cited by 3 · see citing works
Generative Artificial Intelligence and Large Language Models in Clinical Oncology
Yu, Y., Zhao, Z., Wang, Z., Lin, R., Tan, Y., Chen, Y., Li, T., Baptista‐Hon, D. T., Zhang, X., Wu, C., et al. (2026) · MedComm · doi:10.1002/mco2.70833 · Cited by 2 · see citing works
“Inspired by architectures such as VisualBERT and CLIP, LLMs can align and jointly encode medical images with textual descriptions to enhance understanding of individual patient characteristics [ 121, 122 ].”
Self-citationAI for science: Progress, challenges, and perspectives
Xu, Y., Shao, Z., Liu, X., Li, Y., An, Z., Fu, C., Huang, C., Zhang, L., Gao, F., Li, J., et al. (2026) · The Innovation · doi:10.1016/j.xinn.2026.101530 · Cited by 3 · see citing works
Self-citationŢicală, C., Pintea, C.-M., Chira, M., et al. (2025) · Medical Sciences · doi:10.3390/medsci13030097 · Cited by 2 · see citing works
A Unified Platform for Radiology Report Generation and Clinician-Centered AI EvaluationPreprint
Ma, Z., Yang, X., Atalay, Z., Yang, A. E., Collins, S., Bai, H. X., Bernstein, M. H., Baird, G. L., & Jiao, Z. (2025) · medRxiv · doi:10.1101/2025.07.07.25331018 · Cited by 2 · see citing works
“Among them, large language models have demonstrated remarkable capabilities in language generation and question answering across various tasks, particularly in radiology report generation for X-rays, CT scans, and even MRIs[1].”
Choi, H., Bae, S., & Na, K. J. (2026) · medRxiv · doi:10.64898/2026.02.21.26346798 · Cited by 2 · see citing works
MoMA: a mixture-of-multimodal-agents architecture for enhancing clinical prediction modelling
Gao, J., Rahman, M., Caskey, J., Oguss, M., O’Rourke, A., Brown, R., Stey, A., Mayampurath, A., Churpek, M. M., Chen, G., et al. (2025) · npj Digital Medicine · doi:10.1038/s41746-025-02219-4 · Cited by 2 · see citing works
“…summary overwrote textual information (e.g., “ The specialist reports right basal atelectasis, small right pleural effusion, and cardiomegaly, whereas the Aggregator — guided by the original clinical and radiology notes — states no effusion or atelectasis and does not mention cardiomegaly ” ).”
The Application of Foundation Models in Radiology: Bridging Images, Reports, and Beyond
Lee, D. (2025) · Journal of the Korean Society of Radiology · doi:10.3348/jksr.2025.0048 · Cited by 2 · see citing works
A generalizable automated geophysical agent workflow for accessible subsurface hydrology analysis
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Beste, N. C., Bunck, A. C., Kottlors, J., et al. (2026) · Diagnostics · doi:10.3390/diagnostics16040619 · Cited by 1 · see citing works
“Such automated pulmonary vessel analysis pipelines have been successfully applied across diseases including COPD and interstitial lung disease, supporting their methodological robustness and clinical relevance [25].”
Hao, P., Zhang, J., Zhang, S., Wu, F., & Tian, S. (2026) · Scientific Reports · doi:10.1038/s41598-026-41439-w · Cited by 1 · see citing works
DeepSparse: A Foundation Model for Sparse-View CBCT Reconstruction
Lin, Y., Chen, J., Wang, H., et al. (2026) · IEEE Transactions on Medical Imaging · doi:10.1109/tmi.2026.3674948 · Cited by 1 · see citing works
“For example, Li et al. [47] develop a multimodal framework that integrates 3D brain CT data with large language models, enabling automated, high-quality radiology report generation.”
Nguemo, A., Bryan, F., Ghamacha, A., et al. (2026) · The Veterinary Journal · doi:10.1016/j.tvjl.2026.106674 · Cited by 1 · see citing works
A three-dimensional multi-modal foundation model for optical coherence tomography
Liu, Z., Xu, H., Woicik, A., Shapiro, L. G., Blazes, M. S., Wu, Y., Steffen, V., Cukras, C. A., Lee, C. S., Zhang, M., et al. (2026) · Nature Biomedical Engineering · doi:10.1038/s41551-026-01662-2 · Cited by 2 · see citing works
Application of large language models in medical diagnosis: A bibliometric review
Zhang, Q., Wang, H., Li, H., Jiao, F., Zhou, H., & Li, M. (2026) · Digital Health · doi:10.1177/20552076261462624 · Cited by 1 · see citing works
A survey on medical multimodal retrieval-augmented generation (RAG)
Wang, R., Wang, J., Huang, Y., Guo, H., & Pang, J. (2026) · High-Confidence Computing · doi:10.1016/j.hcc.2026.100415 · Cited by 3 · see citing works
A roadmap for medical large language models: a review of foundations, applications, and challenges
Sha, Y.-Y., Yu, L., Lin, Z.-H., Kaur, A., Lou, Y., Gornale, S. S., Zhang, T., Wong, L. S., Wang, Z., Yan, Y., et al. (2026) · Military Medical Research · doi:10.1016/j.mmr.2026.100050 · Cited by 2 · see citing works
“In generation-oriented settings, models assist in drafting clinical narratives from encounter information, including discharge summaries, progress notes, procedure notes, and radiology reports [185,186,193].”
Language-Guided Segmentation of Medical Images: A Review of Foundation Models
Qamar, S. (2026) · Bioengineering · doi:10.3390/bioengineering13070803 · Cited by 1 · see citing works
“CheXagent provides grounded report generation and a multi-task chest X-ray foundation model [105], while RaDialog, inter-pretable concept-bottleneck reporting, and ChatRadio-Valuer extend dialog and impression generation [122,170–172].”
Cho, A.-Y., Eo, S., Jeon, M., Kim, J., Ihm, J., & Seo, D. (2026) · JMIR Medical Education · doi:10.2196/91809 · Cited by 2 · see citing works
Ţicală, C., Pintea, C.-M., Chira, M., et al. (2025) · SSRN Electronic Journal · doi:10.2139/ssrn.5374459 · Cited by 1 · see citing works
Liu, S., Bao, L., Yang, Q., Geng, W., Zheng, B., Li, C., Chen, W., Peng, H., & Yuan, Y. (2026) · arXiv · doi:10.48550/arxiv.2602.03320 · Cited by 1 · see citing works
“Furthermore, we benchmark against SOTA MLLM-based methods, including four general-domain models (LISA (Lai et al., 2024), GALLM (Rasheed et al., 2024), HyperSeg (Wei et al., 2024a), and Seg-R1 (You & Wu, 2025)) and three specialized medical MLLMs (MedPLIB (Huang et al., 2025b), UniBioMed (Wu et al., 2025b), and Citrus…”
InfluentialSelf-citationCepeda, S., Estaban-Sinovas, O., Arrese, I., et al. (2025) · medRxiv · doi:10.1101/2025.06.13.25329546
“Rather than relying on large language models (LLMs) for automated report generation, as proposed in other recent works 28 , we emphasize a structured, quantitative, and interpretable framework grounded in volumetric analysis.”
An Overview of Artificial Intelligence in Neurology
Parker, T., & Brush, B. (2025) · Seminars in Neurology · doi:10.1055/a-2693-0547
Zhu, X., Mo, F., Zhang, Z., et al. (2025) · ACM International Conference on Multimedia (ACM MM) · doi:10.1145/3746027.3754716
Ma, Z., Bahja, A. R., Burgdorf, A., Pomp, A., Meisen, T., Jôrgensen, B. N., & Ma, Z. G. (2025) · Applied Sciences · doi:10.3390/app152111619
Zhang, Y., Yang, D., Shi, Y., & Liu, Y. (2025) · Cureus · doi:10.7759/cureus.99026
“…lung cancer types, complex cases, etc., which involve more types of multimodal data such as imaging, pathology, molecular testing, and so on, to build a standard set, not only for common cases but also for uncommon cases, in order to make models learn how to deal with complex scenarios [25-27].”
Balancing privacy and performance: the impact of facial defacing on AI in medical imaging
Wang, Y., Dai, Y., Guan, H., Li, C.-Y., Vora, M., Ujano, D., Nandi, A., Wu, J., Zhang, P., Honce, J. M., et al. (2026) · EBioMedicine · doi:10.1016/j.ebiom.2026.106457
“38 This framework was used to evaluate the impact of defacing on down-stream report generation using three defaced datasets (QuickShear, PyDeface, mri_reface) and the original CT images.”
Self-citationLarge language models in neuro-oncology: promise, pitfalls, and the path forward
Brisset, J. (2026) · European Radiology · doi:10.1007/s00330-025-12239-z
Enhancing medical MLLMs with dual vision encoders and MoE-based modality projector
Zhou, F., Liu, X., Yang, Z., Li, Z., & Xiao, H. (2026) · Knowledge-Based Systems · doi:10.1016/j.knosys.2026.115275
Generative AI and medical oncologists: Be curious, but cautious!
Quaglini, S., Sacchi, L., Sottotetti, F., Premoli, A., & Locati, L. D. (2026) · Tumori Journal · doi:10.1177/03008916251388549
“26 Once trained on full DICOM-format data-sets comprising millions of images and corresponding text reports, these models will likely demonstrate improved performance in biomedical image interpretation.”
Efficient Adaptation Techniques and Applications for Medical Foundation Models: A Systematic Review
Liu, S., Chen, R., & Cai, J. (2025) · International Conference on Computational Intelligence and Applications (ICCIA) · doi:10.1109/iccia67866.2025.00027
“…2022 BenTsao(HuaTuo)[25] Text LLaMA Medical Question Answering 2023 ChatDoctor[26] Text LLaMA CAD 2023 BioGPT[27] Text GPT-2 CAD 2022 BrainGPT[28] Multimodal Otter CAD 2025 Med-PaLM M[29] Multimodal PaLM-ViT CAD; Predictive Analytics; Disease Detection 2024 LLaVA-Med[30] Multimodal LLaVA CAD…”
3D Venous Anatomy Analysis for Pancreatic Surgery Using Large Vision-Language Model
Zeng, Y., Wang, Y., Li, M., Ren, S., Li, J., Yuan, W., Meng, C., & Yuan, C. (2025) · IEEE International Conference on Bioinformatics and Biomedicine (BIBM) · doi:10.1109/bibm66473.2025.11356698 · Cited by 1 · see citing works
“Second, VLMs are designed for 2D images and cannot be directly applied to 3D CT data, and common approaches that rely on slicing CT scans [19]–[21] fail to capture the complete venous anatomy.”
PMC-Vid: A Large-Scale Biomedical Video Captioning Dataset
Yamagishi, Y., Saito, K., Hashimoto, A., & Ushiku, Y. (2025) · IEEE International Conference on Computer Vision Workshops · doi:10.1109/iccvw69036.2025.00135
“Recent success in biomedical image text tasks, such as radiology report generation [16, 27, 42, 43] and pathology image analysis [37, 52], demonstrates the potential of multimodal learning in healthcare, yet similar progress in video understanding has been hindered by the lack of comprehensive…”
Schilder, M. B., Keyser, A., van Hees, S., Sbrizzi, A., & Boon, W. (2026) · Journal of Medical Internet Research · doi:10.2196/83407 · Cited by 1 · see citing works
Liu, S., Ye, Z., Lin, Y., Hu, C., Geng, W., Han, X., Ibragimov, B., Zheng, Y., & Yuan, Y. (2026) · Lecture notes in computer science · doi:10.1007/978-3-032-38059-3_34
Cepeda, S., Sinovas, O. E., Yüce, M., et al. (2026) · Neurosurgery · doi:10.1227/neu.0000000000004020
Virtual medicine: medical AI in human health and diseases
Zhang, C., Wang, F.-X., Tang, X., Li, J.-L., Ding, N., Hong, Y., Song, P., Bai, L., & Su, J. (2026) · Military Medical Research · doi:10.1016/j.mmr.2026.100012 · Cited by 1 · see citing works
Wang, Z., Ma, T., & Wang, H. (2026) · Die Radiologie · doi:10.1007/s00117-026-01608-4 · Cited by 2 · see citing works
LLM-enabled adaptive scheduling in IoT sensing for optimized network performance
Khan, M. N., Lee, S., Lee, S. S., et al. (2026) · Scientific Reports · doi:10.1038/s41598-025-32660-0 · Cited by 1 · see citing works
Zhang, Y., Li, X., Lu, J., et al. (2026) · IEEE Transactions on Ultrasonics · doi:10.1109/tuson.2026.3688841
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InfluentialExpectations for Multimodal Large Language Models in Endoscopy Reporting
Sekiguchi, M., & Mizuguchi, Y. (2026) · Digestive Endoscopy · doi:10.1111/den.70196
Choi, H., Bae, S., & Na, K. J. (2026) · Journal of Nuclear Medicine · doi:10.2967/jnumed.126.272362
“Future work should validate work fl ow-level agents across multiple institutions, tracers, and disease indications and should explore integration with next-generation multimodal models capable of deeper spatial reasoning ( 27 , 28 ).”
Vision-language foundation models for 3D neuroradiological interpretation: A systematic review
Gurary, S. T., Ndengera, M., Korchi, A., Reith, N., Esparza, J. F. O., Botta, D., Lövblad, K. O., & Kurz, F. T. (2026) · European Journal of Radiology Artificial Intelligence · doi:10.1016/j.ejrai.2026.100111
A multimodal foundation model for emergency head CT interpretationPreprint
Zheng, J., Chen, Y., Wu, B., Wang, Y., Liu, M., Li, L., Jiang, S., Chen, W. P., Xu, L., Wu, Y., et al. (2026) · medRxiv · doi:10.64898/2026.07.07.26357429
Self-citationChen, Y., Zheng, J., Wang, Y., Wu, B., Li, L., Liu, M., Xu, L., Wu, Y., Liu, C., Guo, L., et al. (2026) · medRxiv · doi:10.64898/2026.07.11.26357421
Self-citationDentAI: A Feasibility Study on Tooth Detection and Report Generation Using YOLO and Language Models
Das, R., & Kalita, S. (2026) · Lecture notes in networks and systems · doi:10.1007/978-3-032-31523-6_16
Implementing AI in Neuroradiology
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Kushwah, V. R. S., & Shrivastava, A. K. (2026) · International Conference on Emerging Trends in Information, Communication & Systems (ICETICS) · doi:10.1109/icetics69505.2026.11651322
“[18] In an attempt to enhance the 3D CT radiology report generation (RRG), a clinically visual instruction-tuned model, BrainGPT, was proposed based on 18,885 scan-text pairs extracted from the 3D-BrainCT corpus.”
Öz, D. S., Sevim, M. E., Tanışman, Ö., Öz, Ö. F., & Urger, S. E. (2026) · Journal of Imaging Informatics in Medicine · doi:10.1007/s10278-026-02213-6
Tu, C.-R., Hsueh, H.-W., Chang, W.-C., Lin, Y.-T., Cheng, Y.-H., Chu, W.-H., Tseng, S.-W., & Hsu, S.-H. (2026) · ACS Measurement Science Au · doi:10.1021/acsmeasuresciau.6c00264
Huang, J.-L., Zhu, J., & Ni, X. (2026) · Journal of Medical Internet Research · doi:10.2196/97007
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Ramon‐Gonen, R., & Engelstein, H. (2026) · Computation · doi:10.3390/computation14090215
- Authors
- Li, C.-Y., Chang, K.-J., Yang, C.-F., Wu, H.-Y., Chen, W., Bansal, H., Chen, L., Yang, Y.-P., Chen, Y.-C., Chen, S.-P., Chen, S.-J., Lirng, J.-F., Chang, K.-W., & Chiou, S.-H.
- Affiliations
- National Yang Ming Chiao Tung University (TW)
- University of California, Los Angeles (US)
- City University of Hong Kong (HK)
- Corresponding author
- Chang, Kao-Jung
- Chang, Kai-Wei
- Chiou, Shih-Hwa
- ORCID
- Venue
- Nature Communications
- Published
- 2025-03-06
- Volume
- 16
- Issue
- 1
- Pages
- 2258-2258
- ISSN
- 2041-1723 (ISSN-L)
- PMC
- PMC11885477
- OpenAlex
- W4408190450
- Semantic Scholar
- 04e60879e76d682d161cd0365f8db55b5d2c210c
- Cited by
- 75
- References
- 59
- Citations by year
- 2026: 48 · 2025: 26 · 2024: 1
- FWCI
- 25.98
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- Locations
- Nature Communications (publishedVersion, cc-by-nc-nd)
- Research Square (acceptedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by-nc-nd)
- PubMed (publishedVersion)
- arXiv (Cornell University) (submittedVersion, cc-by)
- CityU Scholars (submittedVersion, cc-by-nc-nd)
- RePEc: Research Papers in Economics (submittedVersion)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
- arXiv (Cornell University) (cc-by)
- Funders
- U.S. Department of Veterans Affairs
- Shanghai Educational Development Foundation
- Taipei Veterans General Hospital
- National Science and Technology Council (NSTC 112-2321-B-A49-007)
- Topics
- Physical Sciences › Computer Science › Computer Vision and Pattern Recognition › Multimodal Machine Learning Applications
- Health Sciences › Medicine › Health Informatics › Artificial Intelligence in Healthcare and Education
- Health Sciences › Medicine › Radiology, Nuclear Medicine and Imaging › Radiology practices and education
- Keywords
- multimodal large language models, radiology report generation, clinical text generation
- MeSH terms
- Brain, Humans, Tomography, X-Ray Computed, Imaging, Three-Dimensional
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Claims read by deepseek-v4.1-flash under definition version 3 (extract-v3) on 2026-10-09.
Classified by jev-1.13-20260917 (gold-guideline-v0.2) on 2026-10-09.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
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