Cited by 713Genomics and Chromatin DynamicsChromatin Remodeling and CancerEpigenetics and DNA Methylation

Determinants of enhancer and promoter activities of regulatory elements

Open access
Andersson, Robin, Sandelin, Albin·2020·Nature Reviews Genetics

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Integrity signals

Registry

Crossref · 10.1038/s41576-019-0173-8

Cites

31 of 31 references verified0 citation errors · 0 not checkable

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  • Enhancers and promoters share many properties.

    “Contrary to the initial assumption that enhancers and promoters were biologically distinguishable elements, it is becoming clear that they share many properties (reviewed in [233]).”

    From Transcriptional enhancers and their communication with gene promoters (2021) · cites this paper as [233]

    The available passages identify a review about enhancer and promoter activities, but contain no discussion of whether the two share properties. Searches for shared properties, functional similarities, and a blurred distinction returned only bibliographic text, so the claim cannot be verified from our copy. (LLM, conf=0.70)

    Experimental — accuracy not yet measured
  • Cis-regulatory elements exist on a spectrum of enhancer/promoter ability.

    “Recently, it has been proposed that cis-regulatory elements exist on a spectrum of enhancer/promoter ability [233, 248].”

    From Transcriptional enhancers and their communication with gene promoters (2021) · cites this paper as [233]

    The supplied passages and indexed matches contain bibliographic information, not the paper’s discussion of regulatory elements. Searches for an enhancer–promoter spectrum, a continuum of activity, and elements functioning as both enhancers and promoters found no substantive passage, so this copy cannot verify the claim. (LLM, conf=0.74)

    Experimental — accuracy not yet measured
  • Most known transcription factors bind to both enhancers and promoters.

    “Most of the known transcription factors bind to both enhancers and promoters [70,71].”

    From Enhancer Function in the 3D Genome (2023) · cites this paper as [71]

    The available copy contains bibliographic information and funding details, but no discussion of transcription-factor binding. Searches for the claim and for shared binding at enhancers and promoters found no passage addressing whether most known transcription factors bind to both. (LLM, conf=0.76)

    Experimental — accuracy not yet measured

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Authors
Andersson, R., & Sandelin, A.
Affiliations
University of Copenhagen (DK)
Corresponding author
  • Andersson, Robin
  • Sandelin, Albin
Venue
Nature Reviews Genetics
Published
2019-10-11
Volume
21
Issue
2
Pages
71-87
ISSN
  • 1471-0056 (ISSN-L)
  • 1471-0064
OpenAlex
W2979343233
Cited by
713
References
31
Citations by year
2026: 71 · 2025: 89 · 2024: 116 · 2023: 112 · 2022: 122 · 2021: 136 · 2020: 64 · 2019: 2
FWCI
7.33
Type
journal article
Language
en
Open access
Locations
  • Nature Reviews Genetics (publishedVersion)
  • PubMed (publishedVersion)
  • Research at the University of Copenhagen (University of Copenhagen) (publishedVersion, other-oa)
Funders
  • National Institutes of Health
  • National Institute of Mental Health (R01MH109907)
  • National Human Genome Research Institute (UM1HG009408)
  • National Cancer Institute (R01CA197139)
  • National Institute of General Medical Sciences (K12GM081266)
  • National Institute of Diabetes and Digestive and Kidney Diseases (R01DK090382, R01 DK60540-09, P30DK098722, R01DK106404)
  • National Institute of Child Health and Human Development
  • Eunice Kennedy Shriver National Institute of Child Health and Human Development (P01HD084387)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Chromatin Dynamics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Chromatin Remodeling and Cancer
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Epigenetics and DNA Methylation
Keywords
enhancers, promoter, transcriptional regulatory elements, transcription initiation, transcription start sites, DNA accessibility, transcriptional regulation, enhancer activity, promoter activity
MeSH terms
DNA, Enhancer Elements, Genetic, Promoter Regions, Genetic, Regulatory Sequences, Nucleic Acid, Transcription, Genetic

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