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Single-Cell Transcriptome Analysis as a Promising Tool to Study Pluripotent Stem Cell Reprogramming

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Genetic association and single-cell transcriptome analyses reveal distinct features connecting autoimmunity with cancers

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Identification of Unique Genetic Biomarkers of Various Subtypes of Glomerulonephritis Using Machine Learning and Deep Learning

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Type I interferon dysregulation drives distinct pathogenic pathways in early- and late-onset lupus nephritis

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Orchestration of Skin Pathology in Cutaneous Lupus Erythematosus by HLA Class I Down‐Regulated Senescent Epidermal Basal Cells

Yamamoto, S., Saito, Y., Sato, T., Nakano, S., Kasseki, D., Nagao, A., Miura, N., Nagaoka, K., Kita, A., Miyajima, M., et al. (2025) · Arthritis & Rheumatology · doi:10.1002/art.43244 · Cited by 6

Interferons in HIV-1 infection: mechanisms, antiviral potentials, and therapeutic challenges

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Plasma cell-free DNA genome-wide methylation profiling enables detection and activity assessment in systemic lupus erythematosus

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Genetic interrogation for sequence and copy number variants in systemic lupus erythematosus

Yeo, N. K., Lim, C. K., Yaung, K. N., Khoo, N. K. H., Arkachaisri, T., Albani, S., & Yeo, J. G. (2024) · Frontiers in Genetics · doi:10.3389/fgene.2024.1341272 · Cited by 6

LncRNA XIST/miR-381-3P/STAT1 axis as a potential biomarker for lupus nephritis

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Renal and Peripheral Blood Transcriptome Signatures That Predict Treatment Response in Proliferative Lupus Nephritis—A Prospective Study

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Single-Cell Transcriptional Analysis Deciphers the Inflammatory Response of Skin-Resident Stromal Cells

Liu, B., Li, A., Xu, J., & Cui, Y. (2022) · Frontiers in Surgery · doi:10.3389/fsurg.2022.935107 · Cited by 7

Epigenomic and transcriptomic analysis of chronic inflammatory diseases

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Glomerular Kidney Diseases in the Single-Cell Era

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Association of Immune-Related Genetic and Epigenetic Alterations with Lupus Nephritis

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Non-lesional and Lesional Lupus Skin Share Inflammatory Phenotypes that Drive Activation of CD16+ Dendritic CellsPreprint

Billi, A. C., Ma, F., Plazyo, O., Gharaee‐Kermani, M., Wasikowski, R., Hile, G. A., Xing, X., Yee, C. M., Rizvi, S. M., Maz, M. P., et al. (2021) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2021.09.17.460124 · Cited by 5

Plasmablasts as Translational Biomarkers in Autoimmune Diseases: From Cellular Dynamics to Clinical Decision-Making

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Insights from Comparison of the Renal and Skin Single Cell Transcriptomes in Lupus NephritisPreprint

Der, E. B., Suryawanshi, H., Morozov, P. S., Kustagi, M., Goilav, B., Ranabathou, S., Izmirly, P., Clancy, R. M., Belmont, M. H., Koenigsberg, M., et al. (2018) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/382846 · Cited by 2

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Der, E. B., Suryawanshi, H., Morozov, P. S., Kustagi, M., Goilav, B., Ranabothu, S., Izmirly, P., Clancy, R. M., Belmont, M. H., Koenigsberg, M., et al. (2019) · Abstracts · doi:10.1136/lupus-2019-lsm.300

Single-cell analysis identifies key pathways and prognostic markers in lupus nephritis

Carney, E. F. (2019) · Nature Reviews Nephrology · doi:10.1038/s41581-019-0164-1

Single-cell RNA sequencing of skin and kidney cells in lupus nephritis provides insights into pathogenesis and indicates novel potential biomarkers

Der, E. B., Suryawanshi, H., Ranabothu, S., Goilav, B., Belmont, M. H., Izmirly, P., Bornkamp, N., Jordan, N., Wang, T., Wu, M., et al. (2018) · The Journal of Immunology · doi:10.4049/jimmunol.200.supp.45.3 · Cited by 1

Single cell RNA sequencing to dissect the molecular heterogeneity in lupus nephritis

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