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hVps15, but not Ca2+/CaM, is required for the activity and regulation of hVps34 in mammalian cells

Yan, Ying, Flinn, Rory J., Wu, Haiyan, Schnur, Rachel S., Backer, Jonathan M.·2009·Biochemical Journal

Abstract

The mammalian Class III PI3K (phosphoinositide 3-kinase), hVps34 [mammalian Vps (vacuolar protein sorting) 34 homologue], is an important regulator of vesicular trafficking, autophagy and nutrient sensing. In yeast, Vps34 is associated with a putative serine/threonine protein kinase, Vps15, which is required for Vps34p activity. The mammalian homologue of Vps15p, hVps15 (formerly called p150), also binds to hVps34, but its role in hVps34 signalling has not been evaluated. In the present study we have therefore compared the activity and regulation of hVps34 expressed without or with hVps15. We find that hVps34 has low specific activity when expressed alone; co-expression with hVps15 leads to a marked increase in activity. Notably, beclin-1/UVRAG (UV radiation resistance-associated gene) activation of hVps34 requires co-expression with hVps15; this may be explained by the observation that beclin-1/UVRAG expression increases hVps34/hVps15 binding. Regulation of hVps34 activity by nutrients also requires co-expression with hVps15. Finally, given a recent report that hVps34 activity requires Ca2+/CaM (calmodulin), we considered whether hVps15 might be involved in this regulation. Although hVps34 does bind CaM, we find its activity is not affected by treatment of cells with BAPTA/AM [1,2-bis-(o-aminophenoxy)ethane-N,N,N′,N′-tetra-acetic acid tetrakis(acetoxymethyl ester)] or W7. Removal of CaM by EDTA or EGTA washes has no effect on hVps34 activity, and hVps34 activity in vitro is unaffected by Ca2+ chelation. The results of the present study show that, in mammalian cells, hVps34 activity is regulated through its interactions with hVps15, but is independent of Ca2+/CaM.

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  1. Backer, 2008, The regulation and function of Class III PI3Ks: novel roles for Vps34, Biochem. J., 410, 1, 10.1042/BJ20071427 · DOI
  2. Schu, 1993, Phosphatidylinositol 3-kinase encoded by yeast VPS34 gene essential for protein sorting, Science, 260, 88, 10.1126/science.8385367 · DOI · Paper page
  3. Volinia, 1995, A human phosphatidylinositol 3-kinase complex related to the yeast Vps34p-Vps15p protein sorting system, EMBO J., 14, 3339, 10.1002/j.1460-2075.1995.tb07340.x · DOI · Paper page
  4. Stenmark, 1999, FYVE-finger proteins: effectors of an inositol lipid, J. Cell Sci., 112, 4175, 10.1242/jcs.112.23.4175 · DOI
  5. Lemmon, 2003, Phosphoinositide recognition domains, Traffic, 4, 201, 10.1034/j.1600-0854.2004.00071.x · DOI
  6. Vanhaesebroeck, 2001, Synthesis and function of 3-phosphorylated inositol lipids, Annu. Rev. Biochem., 70, 535, 10.1146/annurev.biochem.70.1.535 · DOI · Paper page
  7. Christoforidis, 1999, Phosphatidylinositol-3-OH kinases are Rab5 effectors, Nat. Cell Biol., 1, 249, 10.1038/12075 · DOI · Paper page
  8. Murray, 2002, Role of Rab5 in the recruitment of hVps34/p150 to the early endosome, Traffic, 3, 416, 10.1034/j.1600-0854.2002.30605.x · DOI · Paper page
  9. Futter, 2001, Human VPS34 is required for internal vesicle formation within multivesicular endosomes, J. Cell Biol., 155, 1251, 10.1083/jcb.200108152 · DOI
  10. Stein, 2003, Human VPS34 and p150 are Rab7 interacting partners, Traffic, 4, 754, 10.1034/j.1600-0854.2003.00133.x · DOI
  11. Furuya, 2005, The evolutionarily conserved domain of Beclin 1 is required for Vps34 binding, autophagy and tumor suppressor function, Autophagy, 1, 46, 10.4161/auto.1.1.1542 · DOI
  12. Liang, 2006, Autophagic and tumour suppressor activity of a novel Beclin1-binding protein UVRAG, Nat. Cell Biol., 8, 688, 10.1038/ncb1426 · DOI · Paper page
  13. Takahashi, 2007, Bif-1 interacts with Beclin 1 through UVRAG and regulates autophagy and tumorigenesis, Nat. Cell Biol., 9, 1142, 10.1038/ncb1634 · DOI
  14. Byfield, 2005, hVps34 is a nutrient-regulated lipid kinase required for activation of p70 S6 kinase, J. Biol. Chem., 280, 33076, 10.1074/jbc.M507201200 · DOI
  15. Nobukuni, 2005, Amino acids mediate mTOR/raptor signaling through activation of class 3 phosphatidylinositol 3OH-kinase, Proc. Natl. Acad. Sci. U.S.A., 102, 14238, 10.1073/pnas.0506925102 · DOI
  16. Gulati, 2008, Amino acids activate mTOR complex 1 via Ca2+/CaM signaling to hVps34, Cell Metab., 7, 456, 10.1016/j.cmet.2008.03.002 · DOI
  17. Juhasz, 2008, The class III PI3K Vps34 promotes autophagy and endocytosis but not TOR signaling in Drosophila, J. Cell Biol., 181, 655, 10.1083/jcb.200712051 · DOI
  18. Stack, 1993, A membrane-associated complex containing the Vps15 protein kinase and the Vps34 PI 3-kinase is essential for protein sorting to the yeast lysosome-like vacuole, EMBO J., 12, 2195, 10.1002/j.1460-2075.1993.tb05867.x · DOI
  19. Panaretou, 1997, Characterization of p150, an adaptor protein for the human phosphatidylinositol (PtdIns) 5-kinase: substrate presentation by phosphatidylinositol transfer protein to the p150-PtdIns 3-kinase complex, J. Biol. Chem., 272, 2477, 10.1074/jbc.272.4.2477 · DOI
  20. Stack, 1995, Vesicle-mediated protein transport: regulatory interactions between the Vps15 protein kinase and the Vps34 PtdIns 3-kinase essential for protein sorting to the vacuole in yeast, J. Cell Biol., 129, 321, 10.1083/jcb.129.2.321 · DOI
  21. Stack, 1994, Vps34p required for yeast vacuolar protein sorting is a multiple specificity kinase that exhibits both protein kinase and phosphatidylinositol- specific PI3-kinase activities, J. Biol. Chem., 269, 31552, 10.1016/S0021-9258(18)31729-0 · DOI
  22. Cao, 2007, Myotubularin lipid phosphatase binds the hVPS15/hVPS34 lipid kinase complex on endosomes, Traffic, 8, 1052, 10.1111/j.1600-0854.2007.00586.x · DOI · Paper page
  23. Cao, 2008, Sequential actions of myotubularin lipid phosphatases regulate endosomal PI(3)P and growth factor receptor trafficking, Mol. Biol. Cell, 19, 3334, 10.1091/mbc.e08-04-0367 · DOI
  24. Lindmo, 2008, The PI 3-kinase regulator Vps15 is required for autophagic clearance of protein aggregates, Autophagy, 4, 500, 10.4161/auto.5829 · DOI
  25. Pollard, 1979, Characterization of cell lines showing growth control isolated from both the wild-type and a leucyl-tRNA synthetase mutant of Chinese hamster ovary cells, J. Cell. Physiol., 98, 571, 10.1002/jcp.1040980315 · DOI
  26. Siddhanta, 1998, Distinct roles for the p110α and hVPS34 phosphatidylinositol 3′-kinases in vesicular trafficking, regulation of the actin cytoskeleton, and mitogenesis, J. Cell Biol., 143, 1647, 10.1083/jcb.143.6.1647 · DOI
  27. Vergne, 2003, Tuberculosis toxin blocking phagosome maturation inhibits a novel Ca2+/calmodulin-PI3K hVPS34 cascade, J. Exp. Med., 198, 653, 10.1084/jem.20030527 · DOI
  28. Herman, 1991, A novel protein kinase homolog essential for protein sorting to the yeast lysosome-like vacuole, Cell, 64, 425, 10.1016/0092-8674(91)90650-N · DOI

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Metadata

Authors
Yan, Y., Flinn, R. J., Wu, H., Schnur, R. S., & Backer, J. M.
Venue
Biochemical Journal
Published
2009-01-16
Volume
417
Issue
3
Pages
747-755
ISSN
  • 0264-6021
  • 1470-8728
Cited by
102
References
1
Language
en

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