Proteasomal adaptation to environmental stress links resistance to proteotoxicity with longevity in Caenorhabditis elegans
Open accessAbstract
The burden of protein misfolding is believed to contribute to aging. However, the links between adaptations to conditions associated with protein misfolding and resistance to the time-dependent attrition of cellular function remain poorly understood. We report that worms lacking aip-1 , a homologue of mammalian AIRAP (arsenic-inducible proteasomal 19S regulatory particle-associated protein), are not only impaired in their ability to resist exposure to arsenite but also exhibit shortened lifespan and hypersensitivity to misfolding-prone proteins under normal laboratory conditions. Mammals have a second, constitutively expressed AIRAP-like gene (AIRAPL) that also encodes a proteasome-interacting protein, which shares with AIRAP the property of enhancing peptide accessibility to the proteasome's active site. Genetic rescue experiments suggest that features common to the constitutively expressed worm AIP-1 and mammalian AIRAPL (but missing in the smaller, arsenite-inducible AIRAP) are important to lifespan extension. In worms, a single AIRAP-related protein links proteasomal adaptation to environmental stress with resistance to both proteotoxic insults and maintenance of animal life span under normal conditions.
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Worms lacking AIP-1, a homologue of the regulatory mammalian subunit AIRAP, exhibit shortened lifespan and hypersensitivity to misfolding proteins.
“worms lacking AIP-1, a homologue of the regulatory mammalian subunit AIRAP, exhibit shortened lifespan and hypersensitivity to misfolding proteins (Yun et al., 2008)”
From Protein Homeostasis and Aging: the importance of exquisite quality control (2011) · cites this paper as Yun et al., 2008
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Cites
Protein folding and misfolding
Dobson, C. M. (2003) · Nature · doi:10.1038/nature02261 · Cited by 4,791 · see citing works
Systematic functional analysis of the Caenorhabditis elegans genome using RNAi
Kamath, R. S., Fraser, A. G., Yan, D., Poulin, G. B., Durbin, R. M., Gotta, M., Kanapin, A. A., Bot, N. L., Moreno, S., Sohrmann, M., et al. (2003) · Nature · doi:10.1038/nature01278 · Cited by 3,542 · see citing works
Protein degradation and protection against misfolded or damaged proteins.
Goldberg, A. L. (2003) · Nature · doi:10.1038/nature02263 · Cited by 2,088 · see citing works
Regulation of aging and age-related disease by DAF-16 and heat-shock factor
Hsu, A.-L., Murphy, C. T., & Kenyon, C. (2003) · Science · doi:10.1126/science.1083701 · Cited by 1,513 · see citing works
Opposing activities protect against age-onset proteotoxicity
Cohen, E., Bieschke, J., Perciavalle, R. M., Kelly, J. W., & Dillin, A. (2006) · Science · doi:10.1126/science.1124646 · Cited by 843 · see citing works
Morley, J. F., Brignull, H. R., Weyers, J. J., & Morimoto, R. I. (2002) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.152161099 · Cited by 811 · see citing works
Proteasomes and their kin: proteases in the machine age
Pickart, C. M., & Cohen, R. E. (2004) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm1336 · Cited by 735 · see citing works
Honda, Y., & Honda, S. (1999) · The FASEB Journal · doi:10.1096/fasebj.13.11.1385 · Cited by 730 · see citing works
Expression of human beta-amyloid peptide in transgenic Caenorhabditis elegans.
Link, C. D. (1995) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.92.20.9368 · Cited by 684 · see citing works
Progressive disruption of cellular protein folding in models of polyglutamine diseases
Gidalevitz, T., Ben-Zvi, A., Ho, K. H., Brignull, H. R., & Morimoto, R. I. (2006) · Science · doi:10.1126/science.1124514 · Cited by 643 · see citing works
Ras signalling on the endoplasmic reticulum and the Golgi
Chiu, V. K., Bivona, T., Hach, A., Sajous, J. B., Silletti, J., Wiener, H., Johnson, R. L., Cox, A. D., & Philips, M. R. (2002) · Nature Cell Biology · doi:10.1038/ncb783 · Cited by 594 · cited 2× · see citing works
“The AIRAP–GST, PSMD14–GST, and M1–CFP mammalian expression vectors were described previously (11).”
BackgroundSelf-citationNollen, E. A. A., Garcia, S. M., van Haaften, G., Kim, S., Chavez, A., Morimoto, R. I., & Plasterk, R. H. A. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0307697101 · Cited by 416 · see citing works
Levinson, W. E., Oppermann, H., & Jackson, J. (1980) · Biochimica et Biophysica Acta (BBA) - Nucleic Acids and Protein Synthesis · doi:10.1016/0005-2787(80)90108-2 · Cited by 338 · see citing works
Lifespan extension in C. elegans by a molecular chaperone dependent upon insulin‐like signals
Walker, G. A., & Lithgow, G. J. (2003) · Aging Cell · doi:10.1046/j.1474-9728.2003.00045.x · Cited by 303 · see citing works
Roles of molecular chaperones in protein misfolding diseases
Barral, J. M., Broadley, S. A., Schaffar, G., & Hartl, F. U. (2004) · Seminars in Cell and Developmental Biology · doi:10.1016/j.semcdb.2003.12.010 · Cited by 295 · see citing works
Zheng, P., Wang, K., Zhang, Q., Huang, Q.-H., Du, Y., Zhang, Q.-H., Xiao, D., Shen, S.-H., Imbeaud, S., Eveno, E., et al. (2005) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0502825102 · Cited by 256 · see citing works
Yokoyama, K., Fukumoto, K., Murakami, T., Harada, S.-I., Hosono, R., Wadhwa, R., Mitsui, Y., & Ohkuma, S. (2002) · FEBS Letters · doi:10.1016/s0014-5793(02)02470-5 · Cited by 229 · see citing works
Induction of four proteins in chick embryo cells by sodium arsenite.
Johnston, D., Oppermann, H., Jackson, J., et al. (1980) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)43671-x · Cited by 215 · see citing works
Interaction of intracellular β amyloid peptide with chaperone proteins
Fonte, V. G., Kapulkin, W. J., Taft, A. S., Fluet, A., Friedman, D., & Link, C. D. (2002) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.152313999 · Cited by 211 · see citing works
Rao, H., & Sastry, A. (2002) · Journal of Biological Chemistry · doi:10.1074/jbc.m200245200 · Cited by 209 · see citing works
Regulation of <i>Caenorhabditis elegans</i> lifespan by a proteasomal E3 ligase complex
Ghazi, A., Henis-Korenblit, S., & Kenyon, C. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0700638104 · Cited by 134 · see citing works
RLE-1, an E3 Ubiquitin Ligase, Regulates C. elegans Aging by Catalyzing DAF-16 Polyubiquitination
Li, W., Gao, B., Lee, S., Bennett, K. L., & Fang, D. (2007) · Developmental Cell · doi:10.1016/j.devcel.2006.12.002 · Cited by 130 · see citing works
Stanhill, A., Haynes, C. M., Zhang, Y., Min, G., Steele, M. C., Kalinina, J., Martinez, E. E., Pickart, C. M., Kong, X., & Ron, D. (2006) · Molecular Cell · doi:10.1016/j.molcel.2006.07.023 · Cited by 112 · see citing works
Self-citationHinault, M., Ben‐Zvi, A., & Goloubinoff, P. (2006) · Journal of Molecular Neuroscience · doi:10.1385/jmn:30:3:249 · Cited by 105 · see citing works
Hsp70 expression and function during embryogenesis
Luft, J. C., & Dix, D. J. (1999) · Cell Stress and Chaperones · doi:10.1379/1466-1268(1999)004 · Cited by 101 · see citing works
Aging cellular networks: Chaperones as major participants
Sőti, C., & Csermely, P. (2006) · Experimental Gerontology · doi:10.1016/j.exger.2006.05.017 · Cited by 66 · see citing works
Protein kinase inhibitors can suppress stress-induced dissociation of Hsp27
Kato, K., Ito, H., Iwamoto, I., Iida, K., & Inaguma, Y. (2001) · Cell Stress and Chaperones · doi:10.1379/1466-1268(2001)006 · Cited by 51 · see citing works
Self-citation
Flagged first, then by citations
Cited by
Sorted by citations
Recognition and Processing of Ubiquitin-Protein Conjugates by the Proteasome
Finley, D. (2009) · Annual Review of Biochemistry · doi:10.1146/annurev.biochem.78.081507.101607 · Cited by 1,764 · see citing works
The proteasome: overview of structure and functions
TANAKA, K. (2009) · Proceedings of the Japan Academy, Series B · doi:10.2183/pjab.85.12 · Cited by 862 · see citing works
The role of protein clearance mechanisms in organismal ageing and age-related diseases
Vı́lchez, D., Sáez, I., & Dillin, A. G. (2014) · Nature Communications · doi:10.1038/ncomms6659 · Cited by 684 · see citing works
Protein Homeostasis and Aging: the importance of exquisite quality control
Koga, H., Kaushik, S., & Cuervo, A. M. (2011) · Ageing research reviews · doi:10.1016/j.arr.2010.02.001 · Cited by 476 · see citing works
Heavy Metals and Metalloids As a Cause for Protein Misfolding and Aggregation
Tamás, M. J., Sharma, S., Ibstedt, S., Jacobson, T., & Christen, P. (2014) · Biomolecules · doi:10.3390/biom4010252 · Cited by 473 · see citing works
“gene expression programs; (1) chaperone- and other heat-shock-response genes are activated, probably to enhance the folding capacity of the cell [62–70]; (2) proteasome-encoding genes are activated to enhance the protein degradation capacity of the cells [64–67,71–73]; and (3) the expression of genes encoding aggregat…”
BackgroundCellular stress responses, hormetic phytochemicals and vitagenes in aging and longevity
Calabrese, V., Cornelius, C., Dinkova‐Kostova, A. T., Iavicoli, I., Paola, R. D., Koverech, A., Cuzzocrea, S., Rizzarelli, E., & Calabrese, E. J. (2011) · Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease · doi:10.1016/j.bbadis.2011.11.002 · Cited by 420 · see citing works
The Mechanistic Links Between Proteasome Activity, Aging and Agerelated Diseases
Sáez, I., & Vı́lchez, D. (2014) · Current Genomics · doi:10.2174/138920291501140306113344 · Cited by 318 · see citing works
“Notably, aip1/AIRAP ameliorates -amyloid peptide and PolyQ toxicity [201, 202].”
BackgroundGenetic Evidence Linking Age-Dependent Attenuation of the 26S Proteasome with the Aging Process
Tonoki, A., Kuranaga, E., Tomioka, T., Hamazaki, J., Murata, S., Tanaka, K., & Miura, M. (2008) · Molecular and Cellular Biology · doi:10.1128/mcb.01227-08 · Cited by 288 · see citing works
“elegans lacking aip-1, a homologue of mammalian AIRAP, exhibit a shortened life span (43).”
BackgroundProteostasis, oxidative stress and aging
Korovila, I., Hugo, M., Castro, J. P., Weber, D., Höhn, A., Grune, T., & Jung, T. (2017) · Redox Biology · doi:10.1016/j.redox.2017.07.008 · Cited by 274 · see citing works
“Accordingly, nematodes with decreased proteasomal activity were much more susceptible to proteotoxic insults [187].”
BackgroundProtein damage, repair and proteolysis
Chondrogianni, N., Petropoulos, I., Grimm, S., Georgila, K., Catalgol, B., Friguet, B., Grune, T., & Gonos, E. S. (2012) · Molecular Aspects of Medicine · doi:10.1016/j.mam.2012.09.001 · Cited by 254 · see citing works
Proteasomal Regulation of the Hypoxic Response Modulates Aging in C. elegans
Mehta, R., Steinkraus, K. A., Sutphin, G. L., Ramos, F. J., Shamieh, L. S., Huh, A., Davis, C., Chandler-Brown, D. B., & Kaeberlein, M. R. (2009) · Science · doi:10.1126/science.1173507 · Cited by 243 · see citing works
Control of p97 function by cofactor binding
Buchberger, A., Schindelin, H., & Hänzelmann, P. (2015) · FEBS Letters · doi:10.1016/j.febslet.2015.08.028 · Cited by 219 · see citing works
“[65]; SelS (also called VIMP, VCP-Interacting Membrane Protein), a protein involved in the recruitment of p97 to the ER membrane [66]; and the yeast protein Wss1, a metalloprotease involved in DNA–protein crosslink repair [67].”
BackgroundModeling human diseases in Caenorhabditis elegans
Markaki, M., & Tavernarakis, N. (2010) · Biotechnology Journal · doi:10.1002/biot.201000183 · Cited by 205 · see citing works
“In turn, ZYG-12 acts as a linker connecting membrane compartments with the microtubule cytoskeleton protein.”
BackgroundProtein Homeostasis in Models of Aging and Age-Related Conformational Disease
Kikis, E. A., Gidalevitz, T., & Morimoto, R. I. (2010) · Advances in experimental medicine and biology · doi:10.1007/978-1-4419-7002-2_11 · Cited by 187 · see citing works
Catalytic Mechanism and Assembly of the Proteasome
Marques, A. J., Palanimurugan, R., Matias, A. C., Ramos, P. C., & Dohmen, R. J. (2009) · Chemical Reviews · doi:10.1021/cr8004857 · Cited by 175 · see citing works
Turakhiya, A., MEYER, S. R., Marincola, G., Böhm, S., Vanselow, J. T., Schlösser, A., Hofmann, K., & Buchberger, A. (2018) · Molecular Cell · doi:10.1016/j.molcel.2018.04.021 · Cited by 174 · see citing works
Chondrogianni, N., Georgila, K., Kourtis, N., Tavernarakis, N., & Gonos, E. S. (2014) · The FASEB Journal · doi:10.1096/fj.14-252189 · Cited by 174 · see citing works
“In support, worms with decreased proteasome activity due to lack of an inducible 19S subunit are unable to combat proteotoxic insult (65), and overexpression of the same subunit reduces Ab accumulation thus reducing b-amyloid peptide toxicity (66).”
BackgroundUbiquitin recognition by the proteasome
Saeki, Y. (2016) · The Journal of Biochemistry · doi:10.1093/jb/mvw091 · Cited by 162 · see citing works
Kroeger, H., Miranda, E., Ian, M., Pérez, J., Crowther, D. C., Marciniak, S. J., & Lomas, D. A. (2009) · Journal of Biological Chemistry · doi:10.1074/jbc.m109.027102 · Cited by 141 · see citing works
Shore, D. E., Carr, C. E., & Ruvkun, G. (2012) · PLoS Genetics · doi:10.1371/journal.pgen.1002792 · Cited by 125 · see citing works
“Proteasome regulatory components like aip-1, and potentially skn-1, are believed to prolong lifespan by stimulating the degradation of damaged proteins [69].”
BackgroundChondrogianni, N., Voutetakis, K., Καπετάνου, Μ., Delitsikou, V., Papaevgeniou, N., Sakellari, M., Lefaki, M., Filippopoulou, K., & Gonos, E. S. (2014) · Ageing Research Reviews · doi:10.1016/j.arr.2014.12.003 · Cited by 112 · see citing works
EGF signalling activates the ubiquitin proteasome system to modulate C. elegans lifespan
Liu, G., Rogers, J. V., Murphy, C. T., & Rongo, C. (2011) · The EMBO Journal · doi:10.1038/emboj.2011.195 · Cited by 110 · see citing works
“The HSF-1 heat shock factor and the insulin/IGF-1 signalling (IIS) pathway can regulate lifespan at least in part by altering protein homoeostasis (Morley et al, 2002; Hsu et al, 2003; Walker and Lithgow, 2003; Ghazi et al, 2007; Yun et al, 2008; David et al, 2010; Hamer et al, 2010).”
BackgroundProtein aggregation as a paradigm of aging
Lindner, A. B., & Démarez, A. (2009) · Biochimica et Biophysica Acta (BBA) - General Subjects · doi:10.1016/j.bbagen.2009.06.005 · Cited by 106 · see citing works
Gidalevitz, T., Kikis, E. A., & Morimoto, R. I. (2010) · Current Opinion in Structural Biology · doi:10.1016/j.sbi.2009.11.001 · Cited by 111 · see citing works
“elegans ensures both resistance to proteotoxic conditions, including polyQ aggregation, and maintenance of life span under normal conditions, arguably through regulating degradation of misfolded proteins [39].”
BackgroundA photoconvertible reporter of the ubiquitin-proteasome system in vivo
Hamer, G., Matilainen, O., & Holmberg, C. I. (2010) · Nature Methods · doi:10.1038/nmeth.1460 · Cited by 105 · see citing works
Structure, Dynamics and Function of the 26S Proteasome
Mao, Y. (2020) · Sub-cellular biochemistry/Subcellular biochemistry · doi:10.1007/978-3-030-58971-4_1 · Cited by 105 · see citing works
The ubiquitin proteasome system in Caenorhabditis elegans and its regulation
Papaevgeniou, N., & Chondrogianni, N. (2014) · Redox Biology · doi:10.1016/j.redox.2014.01.007 · Cited by 97 · see citing works
Proteasome activation delays aging in vitro and in vivo
Chondrogianni, N., Sakellari, M., Lefaki, M., Papaevgeniou, N., & Gonos, E. S. (2014) · Free Radical Biology and Medicine · doi:10.1016/j.freeradbiomed.2014.03.031 · Cited by 94 · see citing works
“In contrast, animals fed with aip-1 RNAi have a shorter median life span [223].”
BackgroundNeurodegenerative disorders: Insights from the nematode Caenorhabditis elegans
Dimitriadi, M., & Hart, A. C. (2010) · Neurobiology of Disease · doi:10.1016/j.nbd.2010.05.012 · Cited by 95 · see citing works
The Proteasome and Its Network: Engineering for AdaptabilityPreprint
Finley, D. J., & Prado, M. A. (2019) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a033985 · Cited by 84 · see citing works
“A constitutive homolog located in the endoplasmic reticulum (ER),AIRAPL (also known as ZFAND2B) was later identified, and Caenorhabditis elegans lacking this activity were found to have a decreased life span and to be hypersensitive to the expression of misfolded proteins (Yun et al. 2008).”
BackgroundThe Machado-Joseph disease deubiquitylase ATX-3 couples longevity and proteostasis
Kuhlbrodt, K., Janiesch, P. C., Kevei, É., Segref, A., Barikbin, R., & Hoppe, T. (2011) · Nature Cell Biology · doi:10.1038/ncb2200 · Cited by 81 · see citing works
“It is well accepted that the age-related decline of general proteostasis networks is mainly caused by impaired UPS activity, which results in enhanced protein aggregation and contributes to normal agein”
BackgroundKriegenburg, F., Poulsen, E. G., Koch, A., Krüger, E., & Hartmann‐Petersen, R. (2011) · Antioxidants and Redox Signaling · doi:10.1089/ars.2010.3590 · Cited by 75 · see citing works
“Upon incorporation, AIRAP stimulates proteasomal cleavage of peptide substrates (328, 395), suggesting that AIRAP adjusts proteasome activity to counter the proteotoxic stress provoked by As(III).”
InfluentialTeschendorf, D., & Link, C. D. (2009) · Molecular Neurodegeneration · doi:10.1186/1750-1326-4-38 · Cited by 74 · see citing works
“Microarray studies with this model identified AIP-1, a conserved protein thought to be a positive regulator of proteasome function [41,42], as an Aβ-induced protein that protects against toxicity by reducing Aβ accumulation [43].”
BackgroundOn the enigma of carnosine’s anti-ageing actions
Hipkiss, A. R. (2008) · Experimental Gerontology · doi:10.1016/j.exger.2008.11.001 · Cited by 72 · see citing works
“Decreased intracellular elimination of aberrant polypeptides by proteasomal activity and autophagy can contribute to altered protein accumulation, while upregulation of certain proteolytic functions is associated with increased longevity (Min et al., 2008; Yun et al., 2008; Bonelli et al., 2008; Cuervo 2008; Bergami e…”
BackgroundProtein homeostasis and aging: Role of ubiquitin protein ligases
Jana, N. R. (2012) · Neurochemistry International · doi:10.1016/j.neuint.2012.02.009 · Cited by 67 · see citing works
Stapf, C., Cartwright, E. J. P., Bycroft, M., Hofmann, K., & Buchberger, A. (2011) · Journal of Biological Chemistry · doi:10.1074/jbc.m111.274472 · Cited by 65 · see citing works
Changes of the Proteasomal System During the Aging Process
Baraibar, M. A., & Friguet, B. (2012) · Progress in molecular biology and translational science · doi:10.1016/b978-0-12-397863-9.00007-9 · Cited by 63 · see citing works
ZFAND5/ZNF216 is an activator of the 26S proteasome that stimulates overall protein degradation
Lee, D., Takayama, S., & Goldberg, A. L. (2018) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1809934115 · Cited by 58 · see citing works
“3C), were reported to associate with proteasomes (3, 4).”
BackgroundInfluentialAIP-1 ameliorates β-amyloid peptide toxicity in a Caenorhabditis elegans Alzheimer's disease model
Hassan, W. M., Merin, D. A., Fonte, V. G., & Link, C. D. (2009) · Human Molecular Genetics · doi:10.1093/hmg/ddp209 · Cited by 59 · see citing works
“Both AIRAP and AIRAPL can apparently activate proteasomal proteolysis in vitro (12), although only AIRAPL is protective in the C.”
BackgroundInfluentialKeith, S. A., Maddux, S., Zhong, Y., Chinchankar, M. N., Ferguson, A. A., Ghazi, A., & Fisher, A. L. (2016) · PLoS Genetics · doi:10.1371/journal.pgen.1005823 · Cited by 58 · see citing works
“An important response to the reduction in UPS activity in the rpn-10mutant is the activation of the skn-1/Nrf2 transcription factor which then promotes the expression of proteasome subunits, and accessory factors like aip-1/AIRAP, as part of a “bounce-back” response [22, 25, 26].”
BackgroundHipkiss, A. R. (2010) · Frontiers in Aging Neuroscience · doi:10.3389/fnagi.2010.00010 · Cited by 56 · see citing works
“…aberrant polypeptide chains (Carrard et al., 2002; Bergamini et al., 2007; Chondrogianni and Gonos, 2007; Hanson et al., 2008; Kurz et al., 2008a; Yun et al., 2008), it has also been shown that altered proteins can bind to mitochondria and compromise their function (Hansson Petersen et al.,…”
Proteasome Function Determines Cellular Homeostasis and the Rate of Aging
Chondrogianni, N., & Gonos, E. S. (2010) · Advances in experimental medicine and biology · doi:10.1007/978-1-4419-7002-2_4 · Cited by 51 · see citing works
Loss of the proteostasis factor AIRAPL causes myeloid transformation by deregulating IGF-1 signaling
Osorio, F. G., Soria‐Valles, C., Santiago‐Fernández, O., Bernal, T., Mittelbrunn, M., Colado, E., Rodríguez, F. J., Bonzón‐Kulichenko, E., Vázquez, J., Porta-de-la-Riva, M., et al. (2015) · Nature Medicine · doi:10.1038/nm.4013 · Cited by 49 · see citing works
Wiseman, R. L., Chin, K.-T., Haynes, C. M., Stanhill, A., Xu, C.-F., Roguev, A., Krogan, N. J., Neubert, T. A., & Ron, D. (2009) · Journal of Biological Chemistry · doi:10.1074/jbc.m109.002121 · Cited by 46 · see citing works
Self-citationRossi, A., Riccio, A., Coccia, M., et al. (2014) · Journal of Biological Chemistry · doi:10.1074/jbc.m113.513242 · Cited by 45 · see citing works
“It has been discovered recently that mammals have a second, constitutively expressed, AIRAPlike gene (AIRAPL) that also encodes a proteasome-interacting protein that shares with AIRAP the property of enhancing peptide accessibility to the proteasome active site (54).”
BackgroundMechanisms of genotoxicity and proteotoxicity induced by the metalloids arsenic and antimony
Wysocki, R., Rodrigues, J. I., Litwin, I., & Tamás, M. J. (2023) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-023-04992-5 · Cited by 46 · see citing works
Selectivity of the ubiquitin‐binding modules
Rahighi, S., & Đikić, I. (2012) · FEBS Letters · doi:10.1016/j.febslet.2012.04.053 · Cited by 41 · see citing works
“For instance, the tandem UIMs of the Rap80 protein that is involved in the DNA repair mechanisms are shown to obtain specificity toward Lys63-linked diubiquitin [34] (Fig.”
InfluentialAIRAP, a New Human Heat Shock Gene Regulated by Heat Shock Factor 1
Rossi, A., Trotta, E., Brandi, R., et al. (2010) · Journal of Biological Chemistry · doi:10.1074/jbc.m109.082693 · Cited by 41 · see citing works
Sinha, A., Sommer, R. J., & Dieterich, C. (2012) · BMC Genomics · doi:10.1186/1471-2164-13-254 · Cited by 40 · see citing works
“Since proteasome function has been implicated in regulation of longevity [40-42], up regulation of these specific proteasome domains in P.”
BackgroundProteasome mapping reveals sexual dimorphism in tissue‐specific sensitivity to protein aggregations
Jenkins, E. C., Shah, N., Gomez-Jenkins, M., Casalena, G., Zhao, D., Kenny, T. C., Guariglia, S. R., Manfredi, G., & Germain, D. (2020) · EMBO Reports · doi:10.15252/embr.201948978 · Cited by 40 · see citing works
“In addition, stress-induced components have been identified, such as those induced by treatment with arsenite, suggesting the existence of stress-protea-somes, although the exact number of stress-proteasomes remains unclear [26,27].”
Mitotic Dysfunction Associated with Aging Hallmarks.
Macedo, J. C., Vaz, S., & Logarinho, E. (2017) · Advances in Experimental Medicine and Biology · doi:10.1007/978-3-319-57127-0_7 · Cited by 33 · see citing works
Mitochondrial Dysfunction, Proteotoxicity, and Aging
Hipkiss, A. R. (2010) · Advances in clinical chemistry · doi:10.1016/s0065-2423(10)50007-6 · Cited by 35 · see citing works
“Suppression of the toxicity of these aggregates may be facilitated by the actions of chaperone proteins [40–49] in combination with proteolytic activities of proteasomes [50–59], autophagic lysosomes [60–70], and the endoplasmic reticulum [71–74]; toxicity is enhanced when these mechanisms fail [75, 76].”
BackgroundShi, J., Jia, Z., Sun, J., Wang, X.-R., Zhao, X., Zhao, C., Liang, F., Song, X., Guan, J., Xue, J., et al. (2023) · Nature Communications · doi:10.1038/s41467-023-44034-z · Cited by 35 · see citing works
Hipkiss, A. R. (2010) · PubMed · Cited by 34 · see citing works
Stalled Proteasomes Are Directly Relieved by P97 Recruitment
Isakov, E., & Stanhill, A. (2011) · Journal of Biological Chemistry · doi:10.1074/jbc.m111.240309 · Cited by 34 · see citing works
Self-citationBraunstein, I., Zach, L., Allan, S., et al. (2015) · Molecular Biology of the Cell · doi:10.1091/mbc.e15-02-0085 · Cited by 32 · see citing works
“GFP, p97, and AIRAPL polyclonal rabbit antisera were previously described (Yun et al., 2008; Isakov and Stanhill, 2011; Glinka et al., 2014), Bag6 polyclonal serum was a kind gift from Yihong Ye (National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health,…”
BackgroundInfluentialSelf-citationStructure and Function of the Ubiquitin–Proteasome System
Chondrogianni, N., & Gonos, E. S. (2012) · Progress in molecular biology and translational science · doi:10.1016/b978-0-12-397863-9.00002-x · Cited by 30 · see citing works
Miyazaki, Y., Chen, L., Chu, B. W., Swigut, T., & Wandless, T. J. (2015) · eLife · doi:10.7554/elife.07687 · Cited by 28 · see citing works
“At this point, the cocultured cells were then treated with either vehicle or with 30 μM sodium arsenite (Yun et al., 2008), cultured overnight, and analyzed at 24 hr (post appearance of unfolded DD) by flow cytometry.”
MethodWang, X., Cao, M., & Dong, Y. (2016) · Oncotarget · doi:10.18632/oncotarget.10857 · Cited by 27 · see citing works
“However, aging will perturb this regulatory network and decrease the protective capacity of proteostasis [12, 13].”
BackgroundIdentifying Aβ-specific pathogenic mechanisms using a nematode model of Alzheimer's disease
Hassan, W. M., Dostal, V., Huemann, B. N., Yerg, J., & Link, C. D. (2014) · Neurobiology of Aging · doi:10.1016/j.neurobiolaging.2014.10.016 · Cited by 25 · see citing works
“regulatory component of the 19S proteasome caps (Yun et al., 2008), in the Aβ animals, implicates proteasome dysfunction in Aβ toxicity.”
BackgroundResultHSF-1: Guardian of the Proteome Through Integration of Longevity Signals to the Proteostatic Network
Lázaro‐Peña, M. I., Ward, Z. C., Yang, S., Strohm, A. O., Merrill, A. K., Soto, C. A., & Samuelson, A. V. (2022) · Frontiers in Aging · doi:10.3389/fragi.2022.861686 · Cited by 27 · see citing works
“Multiple studies have shown that loss of proteasome subunits lead to premature aging (Yun et al., 2008; Chondrogianni et al., 2015).”
BackgroundFerguson, A. A., Springer, M. G., & Fisher, A. L. (2010) · Molecular and Cellular Biology · doi:10.1128/mcb.01340-09 · Cited by 25 · see citing works
“CAAX motif which is required for function (64).”
BackgroundInfluentialSá‐Moura, B., Funakoshi, M., Tomko, R. J., Dohmen, R. J., Wu, Z., Peng, J., & Hochstrasser, M. (2013) · Journal of Biological Chemistry · doi:10.1074/jbc.m113.521088 · Cited by 25 · see citing works
“Moreover, previous studies had shown that AIRAP and AIRAPL, mammalian proteins related to Cuz1, can interact with the 26 S proteasome (40, 41).”
BackgroundInfluentialSignal-peptide-mediated translocation is regulated by a p97–AIRAPL complex
Glinka, T., Alter, J., Braunstein, I., Tzach, L., Sheng, C. W., Shochat, S. G., Edelmann, M. J., Kessler, B. M., & Stanhill, A. (2013) · Biochemical Journal · doi:10.1042/bj20130710 · Cited by 25 · see citing works
Self-citationSteinbach, M. K., Leipert, J., Blurton, C., et al. (2022) · Journal of Proteome Research · doi:10.1021/acs.jproteome.2c00274 · Cited by 22 · see citing works
UPS Activation in the Battle Against Aging and Aggregation-Related Diseases: An Extended Review
Papaevgeniou, N., & Chondrogianni, N. (2016) · Methods in molecular biology · doi:10.1007/978-1-4939-3756-1_1 · Cited by 22 · see citing works
Vayndorf, E. M., Scerbak, C., Hunter, S., Neuswanger, J. R., Toth, M., Parker, J., Néri, C., Driscoll, M., & Taylor, B. E. (2016) · npj Aging and Mechanisms of Disease · doi:10.1038/npjamd.2016.1 · Cited by 20 · see citing works
Selective Binding of AIRAPL Tandem UIMs to Lys48-Linked Tri-Ubiquitin Chains
Rahighi, S., Braunstein, I., Ternette, N., Kessler, B. M., Kawasaki, M., Kato, R., Matsui, T., Weiss, T. M., Stanhill, A., & Soichi Wakatsuki, A. (2016) · Structure · doi:10.1016/j.str.2015.12.017 · Cited by 20 · see citing works
“Functional impairment of AIRAPL homologues is linked to the acceleration of ageing and protein aggregation (Yun et al., 2008).”
BackgroundMethodInfluentialSelf-citationHanna, J. W., Waterman, D. P., Isasa, M., et al. (2013) · Journal of Biological Chemistry · doi:10.1074/jbc.m113.534032 · Cited by 20 · see citing works
“This protein shows homology to the mammalian proteins AIRAP(3) (arsenite inducible RNAassociated protein) and AIRAP-like protein, as well as Aip-1, which is required for longevity in Caenorhabditis elegans (10, 11).”
BackgroundPredicting protein subcellular location with network embedding and enrichment features
Pan, X., Lü, L., & Cai, Y. (2020) · Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics · doi:10.1016/j.bbapap.2020.140477 · Cited by 19 · see citing works
Scomazzon, S. P., Riccio, A., Santopolo, S., Lanzilli, G., Coccia, M., Rossi, A., & Santoro, M. G. (2019) · Molecular Cancer Research · doi:10.1158/1541-7786.mcr-19-0243 · Cited by 17 · see citing works
“Differently from the AIRAP worm homologue, aip-1, a gene known to play an important role in preserving animal lifespan and buffering arsenicinduced proteotoxicity, mammals have a second, constitutively expressed, AIRAP-like gene (AIRAPL), recently implicated in myeloid transformation.”
BackgroundInfluentialGenome-Scale Studies of Aging: Challenges and Opportunities
McCormick, M. A., & Kennedy, B. K. (2012) · Current Genomics · doi:10.2174/138920212803251454 · Cited by 16 · see citing works
Life and destruction: ubiquitin-mediated proteolysis in aging and longevity
Hoppe, T. (2010) · F1000 Biology Reports · doi:10.3410/b2-79 · Cited by 13 · see citing works
“elegans lacking proteasomal subunits or AIP-1 (ASK-interacting protein 1, a regulator that is important for proteasomal adaptation to proteotoxic stress conditions) exhibit a shortened lifespan [9,10].”
BackgroundCandidate Genes That Affect Aging Through Protein Homeostasis
Argon, Y., & Gidalevitz, T. (2015) · Advances in experimental medicine and biology · doi:10.1007/978-1-4939-2404-2_2 · Cited by 12 · see citing works
The role of RNF149 in the pre-emptive quality control substrate ubiquitination
Legesse, A., Kaushansky, N., Braunstein, I., Saad, H., Lederkremer, G. Z., Navon, A., & Stanhill, A. (2023) · Communications Biology · doi:10.1038/s42003-023-04763-9 · Cited by 10 · see citing works
Self-citationNAD+ and metabolic regulation of age-related proteoxicity: A possible role for methylglyoxal?
Hipkiss, A. R. (2010) · Experimental Gerontology · doi:10.1016/j.exger.2010.03.006 · Cited by 10 · see citing works
“increase the likelihood of ROS generation which could compromise lifespan (Yun et al., 2008).”
Orenstein, S. J., & Cuervo, A. M. (2009) · Springer eBooks · doi:10.1007/978-90-481-3465-6_10 · Cited by 9 · see citing works
Activators of the 26S proteasome when protein degradation increases
Lee, D. (2025) · Experimental & Molecular Medicine · doi:10.1038/s12276-024-01385-x · Cited by 9 · see citing works
Endoplasmic Reticulum Homeostasis and Stress Responses in Caenorhabditis elegans
Lee, S.-K. (2021) · Progress in molecular and subcellular biology · doi:10.1007/978-3-030-67696-4_13 · Cited by 8 · see citing works
Ahmad, S., Arif, B., Akram, Z., Ahmed, M. W., Khan, A. U., Hussain, M. Z., Rahman, F., Kayani, M. A., & Mahjabeen, I. (2020) · Environmental Science and Pollution Research · doi:10.1007/s11356-019-07422-x · Cited by 6 · see citing works
Translating protein phosphatase research into treatments for neurodegenerative diseases
Sundaram, J. R., Lee, I. C. J., & Shenolikar, S. (2017) · Biochemical Society Transactions · doi:10.1042/bst20160157 · Cited by 5 · see citing works
Sun, Z., Bhanu, M. K., Allan, M., et al. (2016) · PLoS ONE · doi:10.1371/journal.pone.0163660 · Cited by 5 · see citing works
Tong, H., Li, W., Yuan, P., et al. (2025) · Journal of Biological Chemistry · doi:10.1016/j.jbc.2025.111026 · Cited by 4 · see citing works
The proteasome as a drug target for treatment of parasitic diseases
Liu, L. J., O’Donoghue, A. J., & Caffrey, C. R. (2024) · Advances in Parasitology/Advances in parasitology · doi:10.1016/bs.apar.2024.04.001 · Cited by 4 · see citing works
Santiago‐Fernández, O., Osorio, F. G., & López-Otı́n, C. (2016) · Experimental Hematology · doi:10.1016/j.exphem.2016.04.004 · Cited by 4 · see citing works
He, L., Zhang, H.-R., Di, W., Li, F., Wang, C., Yang, X., Liu, X., & Hu, M. (2023) · Parasites & Vectors · doi:10.1186/s13071-023-05676-6 · Cited by 3 · see citing works
Kunz, P., Lehmann, C., & Pohl, C. (2021) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2021.619596 · Cited by 3 · see citing works
Protein clearance mechanisms and their demise in age-related neurodegenerative diseases
Sáez, I., & Vı́lchez, D. (2015) · AIMS molecular science · doi:10.3934/molsci.2015.1.1 · Cited by 2 · see citing works
“Accordingly, genetic or chemical enhancement of proteasome function and autophagic potential decreases the loading of aberrant proteins and ameliorates the symptoms and incidence of age-related disorders [140,141,161,162].”
BackgroundProtein metabolism and lifespan in Caenorhabditis elegans.
Depuydt, G., Vanfleteren, J., & Braeckman, B. P. (2010) · Advances in Experimental Medicine and Biology · doi:10.1007/978-1-4419-7002-2_8 · Cited by 2 · see citing works
Tabachnick‐Cherny, S., Berko, D., Pinto, S., Curato, C., Wolf, Y., Porat, Z., Karmona, R., Tirosh, B., Jung, S., & Navon, A. (2020) · The Journal of Immunology · doi:10.4049/jimmunol.1901535 · Cited by 2 · see citing works
Invertebrate Models in Arsenic Research
Cartwright, I. L. (2015) · doi:10.1002/9781118876992.ch21 · Cited by 2 · see citing works
Structural variant selection for high-altitude adaptation using single-molecule long-read sequencingPreprint
Shi, J., Jia, Z., Zhao, X., Sun, J., Liang, F., Park, M., Zhao, C., Wang, X.-R., Chen, Q., Song, X., et al. (2021) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2021.03.27.436702 · Cited by 2 · see citing works
Modulation of host proteostasis by Prevotella corporis via induction of the heat shock response
Tibi, M. F., Argote, Y. M., Walker, A. C., Pandey, S., Puente, C. P., Ellward, G. L., Safwat, A., Rincón-Limas, D. E., & Czyż, D. M. (2026) · Cell Stress and Chaperones · doi:10.1016/j.cstres.2026.100150 · Cited by 1 · see citing works
“We also observed induction of autophagy-associated genes, including bec-1 and aip-1 , which promote protein clearance and survival under stress, 47,48 and are implicated in Alzheimer’s disease pathology, 49,50 further supporting the role of P. corporis in enhancing multiple proteostasis arms.”
Protein Quality Control Coming of Age
Meiners, S. (2014) · doi:10.1002/9781118396292.ch3 · Cited by 1 · see citing works
The novel tumor suppressor AIRAPL regulates IGF1R proteostasis
Osorio, F. G., Freije, J. M. P., & López-Otı́n, C. (2016) · Cell Cycle · doi:10.1080/15384101.2016.1151725 · Cited by 1 · see citing works
The Effects of Aging on Proteasome Activity, Assembly, and Abundance in C. elegans
Joyce, D. (2012) · eScholarship (California Digital Library)
Multi-omic analysis of the aging mouse brain
Kluever, V. (2021) · doi:10.53846/goediss-9022
He, L., Zhang, H.-R., Di, W.-D., Li, F.-F., Wang, C.-Q., Yang, X., Liu, X.-F., & Hu, M. (2023) · Figshare · doi:10.6084/m9.figshare.22620454
- Authors
- Yun, C., Stanhill, A., Yang, Y., Zhang, Y., Haynes, C. M., Xu, C.-F., Neubert, T. A., Mor, A., Philips, M. R., & Ron, D.
- Affiliations
- *The Kimmel Center for Biology and Medicine at the Skirball Institute for Biomolecular Medicine,
- Technion – Israel Institute of Technology (IL)
- New York University (US)
- ORCID
- Venue
- Proceedings of the National Academy of Sciences
- Publisher
- National Academy of Sciences
- Published
- 2008-05-13
- Volume
- 105
- Issue
- 19
- Pages
- 7094-7099
- ISSN
- 0027-8424 (ISSN-L)
- 1091-6490
- PMC
- PMC2383958
- OpenAlex
- W2024324790
- Semantic Scholar
- e2c3b7cbbde14671f6733152b88976afcbe8d571
- Cited by
- 98
- References
- 27
- Citations by year
- 2026: 1 · 2025: 2 · 2024: 1 · 2023: 5 · 2022: 2 · 2021: 4 · 2020: 5 · 2019: 2 · 2018: 2 · 2017: 3 · 2016: 9 · 2015: 7 · 2014: 10 · 2013: 3 · 2012: 9
- FWCI
- 3.20
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Proceedings of the National Academy of Sciences (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Institutes of Health (1s10rr017990-01)
- National Institute of Diabetes and Digestive and Kidney Diseases (DK-47119, R37DK047119, F32-DK61179, R01DK047119, F32DK061179)
- National Institute of Neurological Disorders and Stroke (NS050276, P30NS050276)
- National Institute of Environmental Health Sciences (ES 08681, R01ES008681)
- National Center for Research Resources (RR017990)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Aging › Genetics, Aging, and Longevity in Model Organisms
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Ubiquitin and proteasome pathways
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Heat shock proteins research
- Keywords
- proteasome, protein misfolding, proteotoxicity, lifespan extension, aging, arsenite resistance, 19S regulatory particle, Caenorhabditis elegans, genetic rescue, stress adaptation
- MeSH terms
- Adaptation, Physiological, Animals, Cell Line, Endoplasmic Reticulum, Environment, Humans, Intracellular Membranes, Longevity, Phenotype, Protein Binding, RNA-Binding Proteins, Caenorhabditis elegans, Sequence Homology, Amino Acid, Protein Folding, Arsenites, Caenorhabditis elegans Proteins, Proteasome Endopeptidase Complex, Mice
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