Dynamics of nucleoid structure regulated by mitochondrial fission contributes to cristae reformation and release of cytochrome c
Open accessAbstract
Mammalian cells typically contain thousands of copies of mitochondrial DNA assembled into hundreds of nucleoids. Here we analyzed the dynamic features of nucleoids in terms of mitochondrial membrane dynamics involving balanced fusion and fission. In mitochondrial fission GTPase dynamin-related protein (Drp1)-deficient cells, nucleoids were enlarged by their clustering within hyperfused mitochondria. In normal cells, mitochondrial fission often occurred adjacent to nucleoids, since localization of Mff and Drp1 is dependent on the nucleoids. Thus, mitochondrial fission adjacent to nucleoids should prevent their clustering by maintaining small and fragmented nucleoids. The enhanced clustering of nucleoids resulted in the formation of highly stacked cristae structures in enlarged bulb-like mitochondria (mito-bulbs). Enclosure of proapoptotic factor cytochrome c, but not of Smac/DIABLO, into the highly stacked cristae suppressed its release from mitochondria under apoptotic stimuli. In the absence of nucleoids, Drp1 deficiency failed to form mito-bulbs and to protect against apoptosis. Thus, mitochondrial dynamics by fission and fusion play a critical role in controlling mitochondrial nucleoid structures, contributing to cristae reformation and the proapoptotic status of mitochondria.
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Mitochondrial fission is involved in the release of cytochrome C from mitochondria, which acts as a scavenger of ROS in the cytosol.
“Mitochondrial fission has been reported to be involved in the release of cytochrome C from mitochondria, which acts as a scavenger of ROS in the cytosol [48].”
From In Candida glabrata, ERMES Component GEM1 Controls Mitochondrial Morphology, mtROS, and Drug Efflux Pump Expression, Resulting in Azole Susceptibility (2023) · cites this paper as [48]
The Discussion states that Drp1-dependent mitochondrial fission facilitates cytochrome c release during apoptosis. The paper does not say that released cytochrome c scavenges ROS in the cytosol; its Discussion mentions ROS only in relation to neuronal sensitivity to apoptosis. (LLM, conf=0.88)
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Cites
ER Tubules Mark Sites of Mitochondrial Division
Friedman, J. R., Lackner, L. L., West, M., DiBenedetto, J. R., Nunnari, J., & Voeltz, G. K. (2011) · Science · doi:10.1126/science.1207385 · Cited by 2,072 · see citing works
Mitochondria: More Than Just a Powerhouse
McBride, H. M., Neuspiel, M., & Wasiak, S. (2006) · Current Biology · doi:10.1016/j.cub.2006.06.054 · Cited by 1,985 · see citing works
The Role of Dynamin-Related Protein 1, a Mediator of Mitochondrial Fission, in Apoptosis
Frank, S., Gaume, B., Bergmann-Leitner, E. S., Leitner, W. W., Robert, E. G., Catez, F., Smith, C. L., & Youle, R. J. (2001) · Developmental Cell · doi:10.1016/s1534-5807(01)00055-7 · Cited by 1,755 · see citing works
During autophagy mitochondria elongate, are spared from degradation and sustain cell viability
Gomes, L. C., Benedetto, G. D., & Scorrano, L. (2011) · Nature Cell Biology · doi:10.1038/ncb2220 · Cited by 1,735 · see citing works
Disruption of Fusion Results in Mitochondrial Heterogeneity and Dysfunction
Chen, H., Chomyn, A., & Chan, D. C. (2005) · Journal of Biological Chemistry · doi:10.1074/jbc.m503062200 · Cited by 1,376 · cited 1× · see citing works
“A deficiency in mitochondrial fusion leads to decreased mass and elevated mutation rates of mtDNA and impaired respiratory activity (18, 19).”
BackgroundChen, H., Vermulst, M., Wang, Y. E., Chomyn, A., Prolla, T. A., McCaffery, J. M., & Chan, D. C. (2010) · Cell · doi:10.1016/j.cell.2010.02.026 · Cited by 1,211 · see citing works
Otera, H., Wang, C., Cleland, M. M., Setoguchi, K., Yokota, S., Youle, R. J., & Mihara, K. (2010) · Journal of Cell Biology · doi:10.1083/jcb.201007152 · Cited by 1,110 · see citing works
Self-citationA Distinct Pathway Remodels Mitochondrial Cristae and Mobilizes Cytochrome c during Apoptosis
Scorrano, L., Ashiya, M., Buttle, K., Weiler, S., Oakes, S. A., Mannella, C. A., & Korsmeyer, S. J. (2002) · Developmental Cell · doi:10.1016/s1534-5807(01)00116-2 · Cited by 1,072 · see citing works
Ishihara, N., Nomura, M., Jofuku, A., Kato, H., Suzuki, S. O., Masuda, K., Otera, H., Nakanishi, Y., Nonaka, I., Goto, Y.-I., et al. (2009) · Nature Cell Biology · doi:10.1038/ncb1907 · Cited by 1,066 · see citing works
Self-citationThe ATP synthase is involved in generating mitochondrial cristae morphology
Paumard, P., Vaillier, J., Coulary, B., Schaëffer, J., Soubannier, V., Mueller, D. M., Brèthes, D., di Rago, J., & Velours, J. (2002) · The EMBO Journal · doi:10.1093/emboj/21.3.221 · Cited by 809 · see citing works
Bcl-2 blocks apoptosis in cells lacking mitochondrial DNA
Jacobson, M. D., Burne, J. F., King, M. P., Miyashrta, T., Reed, J. C., & RAFF, M. C. (1993) · Nature · doi:10.1038/361365a0 · Cited by 751 · see citing works
A Lethal Defect of Mitochondrial and Peroxisomal Fission
Waterham, H. R., Koster, J., van Roermund, C. W. T., Mooyer, P. A. W., Wanders, R. J. A., & Leonard, J. V. (2007) · New England Journal of Medicine · doi:10.1056/nejmoa064436 · Cited by 749 · see citing works
The dynamin-related GTPase Drp1 is required for embryonic and brain development in mice
Wakabayashi, J., Zhang, Z., Wakabayashi, N., Tamura, Y., Fukaya, M., Kensler, T. W., Iijima, M., & Sesaki, H. (2009) · Journal of Cell Biology · doi:10.1083/jcb.200903065 · Cited by 667 · see citing works
An ancestral mitochondrial DNA resembling a eubacterial genome in miniature
Lang, B. F., Burger, G., O'Kelly, C. J., Cedergren, R., Golding, G. B., Lemieux, C., Sankoff, D., Turmel, M., & Gray, M. W. (1997) · Nature · doi:10.1038/387493a0 · Cited by 620 · see citing works
Kukat, C., Wurm, C., Spåhr, H., Falkenberg, M., Larsson, N., & Jakobs, S. (2011) · Proceedings of the National Academy of Sciences of the United States of America · doi:10.1073/pnas.1109263108 · Cited by 551 · see citing works
Kaufman, B. A., Durisic, N., Mativetsky, J. M., Costantino, S., Hancock, M. A., Grütter, P., & Shoubridge, E. A. (2007) · Molecular Biology of the Cell · doi:10.1091/mbc.e07-05-0404 · Cited by 431 · see citing works
Membrane Remodeling Induced by the Dynamin-Related Protein Drp1 Stimulates Bax Oligomerization
Montessuit, S., Somasekharan, S. P., Terrones, O., Lucken‐Ardjomande, S., Herzig, S., Schwarzenbacher, R., Manstein, D. J., Bossy‐Wetzel, E., Basáñez, G., Meda, P., et al. (2010) · Cell · doi:10.1016/j.cell.2010.08.017 · Cited by 422 · see citing works
Parone, P. A., Da Cruz, S., Tondera, D., Mattenberger, Y., James, D. I., Maechler, P., Barja, F., & Martinou, J.-C. (2008) · PLoS ONE · doi:10.1371/journal.pone.0003257 · Cited by 415 · see citing works
Human mitochondrial DNA is packaged with TFAM.
Alam, T. I., Kanki, T., Muta, T., Ukaji, K., Abe, Y., Nakayama, H., Takio, K., Hamasaki, N., & Kang, D. (2003) · Nucleic Acids Research · doi:10.1093/nar/gkg251 · Cited by 400 · see citing works
Composition and dynamics of human mitochondrial nucleoids.
Garrido, N., Griparić, L., Jokitalo, E., Wartiovaara, J., van der Bliek, A. M., & Spelbrink, J. (2003) · Molecular Biology of the Cell · doi:10.1091/mbc.e02-07-0399 · Cited by 390 · see citing works
Organization and dynamics of human mitochondrial DNA
Legros, F., Malka, F., Frachon, P., Lombès, A., & Rojo, M. (2004) · Journal of Cell Science · doi:10.1242/jcs.01134 · Cited by 383 · see citing works
The functional organization of mitochondrial genomes in human cells
Iborra, F. J., Kimurâ, H., & Cook, P. R. (2004) · BMC Biology · doi:10.1186/1741-7007-2-9 · Cited by 339 · see citing works
Germain, M., Mathai, J. P., McBride, H. M., & Shore, G. C. (2005) · The EMBO Journal · doi:10.1038/sj.emboj.7600592 · Cited by 337 · see citing works
Frequent fusion and fission of plant mitochondria with unequal nucleoid distribution
Arimura, S., Yamamoto, J., Aida, G. P., Nakazono, M., & Tsutsumi, N. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0401077101 · Cited by 310 · see citing works
Mitochondrial division ensures the survival of postmitotic neurons by suppressing oxidative damage
Kageyama, Y., Zhang, Z., Roda, R. H., Fukaya, M., Wakabayashi, J., Wakabayashi, N., Kensler, T. W., Reddy, P. H., Iijima, M., & Sesaki, H. (2012) · The Journal of Cell Biology · doi:10.1083/jcb.201110034 · Cited by 256 · see citing works
Kopek, B. G., Shtengel, G. E., Xu, C. S., et al. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1121558109 · Cited by 238 · see citing works
Inhibiting the Mitochondrial Fission Machinery Does Not Prevent Bax/Bak-Dependent Apoptosis
Parone, P. A., James, D. I., Cruz, S. D., Mattenberger, Y., Donzé, O., Barja, F., & Martinou, J. (2006) · Molecular and Cellular Biology · doi:10.1128/mcb.02282-05 · Cited by 231 · see citing works
Mammalian mitochondrial nucleoids: Organizing an independently minded genome
Holt, I. J., He, J., Mao, C.-C., Boyd-Kirkup, J. D., Martinsson, P., Sembongi, H., Reyes, A., & Spelbrink, J. N. (2007) · Mitochondrion · doi:10.1016/j.mito.2007.06.004 · Cited by 150 · see citing works
Regulation and Physiologic Functions of GTPases in Mitochondrial Fusion and Fission in Mammals
Ishihara, N., Otera, H., Oka, T., & Mihara, K. (2012) · Antioxidants and Redox Signaling · doi:10.1089/ars.2012.4830 · Cited by 74 · see citing works
Self-citationLoss of Drp1 function alters OPA1 processing and changes mitochondrial membrane organization
Möpert, K., Hajek, P., Frank, S., Chen, C. I.-U., Kaufmann, J., & Santel, A. (2009) · Experimental Cell Research · doi:10.1016/j.yexcr.2009.04.016 · Cited by 66 · see citing works
Anticancer DNA intercalators cause p53-dependent mitochondrial DNA nucleoid re-modelling
Ashley, N., & Poulton, J. (2009) · Oncogene · doi:10.1038/onc.2009.242 · Cited by 57 · see citing works
Sasaki, N., Kuroiwa, H., Nishitani, C., et al. (2003) · Molecular Biology of the Cell · doi:10.1091/mbc.e03-02-0099 · Cited by 54 · see citing works
Self-citationKuroiwa, T. (2010) · Proceedings of the Japan Academy Series B · doi:10.2183/pjab.86.455 · Cited by 21 · see citing works
Visualization of mitochondrial nucleoids in living human cells using SYBR Green I
Ozawa, S., & Sasaki, N. (2009) · CYTOLOGIA · Cited by 5 · see citing works
Self-citation
Flagged first, then by citations
Cited by
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Mitochondrial DNA stress primes the antiviral innate immune response
West, A. P., Khoury-Hanold, W., Staron, M., Tal, M. C., Pineda, C. M., Lang, S. M., Bestwick, M., Duguay, B. A., Raimundo, N., MacDuff, D. A., et al. (2015) · Nature · doi:10.1038/nature14156 · Cited by 1,975 · see citing works
Mitochondrial form and function
Friedman, J. R., & Nunnari, J. (2014) · Nature · doi:10.1038/nature12985 · Cited by 1,803 · see citing works
Mitochondrial Dynamics and Its Involvement in Disease
Chan, D. C. (2020) · Annual Review of Pathology: Mechanisms of Disease · doi:10.1146/annurev-pathmechdis-012419-032711 · Cited by 1,416 · see citing works
Oxidative stress and mitochondrial dysfunction in Alzheimer’s disease
Wang, X., Wang, W., Li, L., Perry, G., Lee, H.-G., & Zhu, X. (2014) · Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease · doi:10.1016/j.bbadis.2013.10.015 · Cited by 1,357 · see citing works
ER-mitochondria contacts couple mtDNA synthesis with mitochondrial division in human cells
Lewis, S. C., Uchiyama, L. F., & Nunnari, J. (2016) · Science · doi:10.1126/science.aaf5549 · Cited by 673 · see citing works
Cooperative and independent roles of the Drp1 adaptors Mff, MiD49 and MiD51 in mitochondrial fission
Osellame, L. D., Singh, A. P., Stroud, D. A., Palmer, C. S., Stojanovski, D., Ramachandran, R., & Ryan, M. T. (2016) · Journal of Cell Science · doi:10.1242/jcs.185165 · Cited by 336 · see citing works
Hu, C., Huang, Y., & Li, L. (2017) · International Journal of Molecular Sciences · doi:10.3390/ijms18010144 · Cited by 302 · see citing works
Busch, K. B., Kowald, A., & Spelbrink, J. N. (2014) · Philosophical Transactions of the Royal Society B Biological Sciences · doi:10.1098/rstb.2013.0442 · Cited by 87 · see citing works
Lethal Disorder of Mitochondrial Fission Caused by Mutations in DNM1L
Yoon, G., Malam, Z., Paton, T., Marshall, C. R., Hyatt, E., Ivakine, Z., Scherer, S. W., Lee, K.-S., Hawkins, C., Cohn, R. D., et al. (2016) · The Journal of Pediatrics · doi:10.1016/j.jpeds.2015.12.060 · Cited by 78 · see citing works
Mitochondrial dynamics in aging and disease
Bereiter-Hahn, J. (2014) · Progress in molecular biology and translational science · doi:10.1016/b978-0-12-394625-6.00004-0 · Cited by 48 · see citing works
Okamoto, M., Nakano, K., Takahashi-Nakaguchi, A., Sasamoto, K., Yamaguchi, M., Teixeira, M. C., & Chibana, H. (2023) · Journal of Fungi · doi:10.3390/jof9020240 · Cited by 11 · see citing works
- Authors
- Ban-Ishihara, R., Ishihara, T., Sasaki, N., Mihara, K., & Ishihara, N.
- Affiliations
- Kurume University (JP)
- Nagoya University (JP)
- Venue
- Proceedings of the National Academy of Sciences
- Publisher
- National Academy of Sciences
- Published
- 2013-07-02
- Volume
- 110
- Issue
- 29
- Pages
- 11863-11868
- ISSN
- 0027-8424 (ISSN-L)
- 1091-6490
- PMC
- PMC3718159
- OpenAlex
- W2033275867
- Cited by
- 231
- References
- 34
- Citations by year
- 2026: 15 · 2025: 14 · 2024: 21 · 2023: 19 · 2022: 16 · 2021: 22 · 2020: 24 · 2019: 23 · 2018: 14 · 2017: 11 · 2016: 15 · 2015: 14 · 2014: 16 · 2013: 5
- FWCI
- 7.46
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Locations
- Proceedings of the National Academy of Sciences (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Takeda Science Foundation
- Fukuoka Foundation for Sound Health
- Japan Society for the Promotion of Science (24770133, 23570076)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Mitochondrial Function and Pathology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Cell death mechanisms and regulation
- Health Sciences › Medicine › Epidemiology › Autophagy in Disease and Therapy
- Keywords
- mitochondrial nucleoids, mitochondrial fission, mitochondrial fusion, Drp1, Mff, cytochrome c release, Smac/DIABLO, apoptosis, mitochondrial DNA
- MeSH terms
- Diamines, Fluorescent Antibody Technique, HeLa Cells, Humans, Microscopy, Fluorescence, Mitochondria, Organic Chemicals, Oxygen Consumption, Quinolines, Immunoblotting, Apoptosis, Reverse Transcriptase Polymerase Chain Reaction, Dynamins, RNA Interference, RNA, Small Interfering, Cytochromes c, Microscopy, Electron, Transmission, Mitochondrial Membranes, Benzothiazoles, Time-Lapse Imaging, Mitochondrial Dynamics
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