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Messenger RNA degradation in eukaryotes

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RNA recognition: towards identifying determinants of specificity

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RNA-binding proteins as developmental regulators.Preprint

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HuD, a paraneoplastic encephalomyelitis antigen, contains RNA-binding domains and is homologous to Elav and sex-lethal

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Characterization and spatial distribution of the ELAV protein during Drosophila melanogaster development

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Hu neuronal proteins are expressed in proliferating neurogenic cells

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The LIM domain-containing homeo box gene Xlim-1 is expressed specifically in the organizer region of Xenopus gastrula embryos.Preprint

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Immune response in lung cancer mouse model mimics human anti-Hu reactivity

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Expression of HuR in Merkel cell carcinoma and in normal skin

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Adeno-associated viral tools to trace neural development and connectivity across amphibians

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Gene organization and chromosome location of the neural-specific RNA binding protein Elavl4

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Down regulation of extramacrochaetae mRNA by a Drosophila neural RNA binding protein Rbp9 which is homologous to human Hu proteins

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Impaired gametogenesis in mice that overexpress the RNA‐binding protein HuR

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Neuronal Expression of a Caenorhabditis elegans elav-like Gene and the Effect of Its Ectopic Expression

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Dihydroartemisinin Attenuates Hypoxia-Induced Pulmonary Hypertension Through the ELAVL2/miR-503/PI3K/AKT Axis

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Alternative role of HuD splicing variants in neuronal differentiation

Hayashi, S., Yano, M., Igarashi, M., Okano, H. J., & Okano, H. (2014) · Journal of Neuroscience Research · doi:10.1002/jnr.23496 · Cited by 20

Regulation of mRNA following brain ischemia and reperfusion

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Analysis of the 5′ end of the mouse Elavl1 (mHuA) gene reveals a transcriptional regulatory element and evidence for conserved genomic organization

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Mouse Chromosomal Locations of Nine Genes Encoding Homologs of Human Paraneoplastic Neurologic Disorder Antigens

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RNA Binding Proteins as Potential Therapeutic Targets in Colorectal Cancer

Singh, V., Singh, A., Liu, A. J., Fuchs, S. Y., Sharma, A. K., & Spiegelman, V. S. (2024) · Cancers · doi:10.3390/cancers16203502 · Cited by 21

RNA-dependent association with myosin IIA promotes F-actin-guided trafficking of the ELAV-like protein HuR to polysomes

Doller, A., Schulz, S., Pfeilschifter, J. M., & Eberhardt, W. (2013) · Nucleic Acids Research · doi:10.1093/nar/gkt663 · Cited by 20

Cytological organization of the central gelatinosa in the turtle spinal cord

Trujillo-Cenóz, O., Fernández, A. S., Radmilovich, M., Reali, C., & Russo, R. E. (2007) · The Journal of Comparative Neurology · doi:10.1002/cne.21306 · Cited by 19

The Protein Zfand5 Binds and Stabilizes mRNAs with AU-rich Elements in Their 3′-Untranslated Regions

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Identification of novel oocyte and granulosa cell markers

Malcuit, C. M., Trask, M. C., Santiago, L. A., Beaudoin, E., Tremblay, K. D., & Mager, J. (2009) · Gene Expression Patterns · doi:10.1016/j.gep.2009.06.004 · Cited by 18

Loss of HuR leads to senescence-like cytokine induction in rodent fibroblasts by activating NF-κB

Hashimoto, M., Tsugawa, T., Kawagishi, H., Asai, A., & Sugimoto, M. (2014) · Biochimica et Biophysica Acta (BBA) - General Subjects · doi:10.1016/j.bbagen.2014.07.005 · Cited by 20

Roles of Embryonic Lethal Abnormal Vision-Like RNA Binding Proteins in Cancer and Beyond

Cai, H., Zheng, D., Yao, Y., Yang, L., Huang, X., & Wang, L. (2022) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2022.847761 · Cited by 18

Adaptive effects of the β2-agonist clenbuterol on expression of β2-adrenoceptor mRNA in rat fast-twitch fiber-rich muscles

Sato, S., Nomura, S., Kawano, F., Tanihata, J., Tachiyashiki, K., & Imaizumi, K. (2009) · The Journal of Physiological Sciences · doi:10.1007/s12576-009-0075-1 · Cited by 20

Functional Characterization of the HuR:CD83 mRNA Interaction

Pieper, D., Schirmer, S., Prechtel, A. T., Kehlenbach, R. H., Hauber, J., & Chemnitz, J. (2011) · PLoS ONE · doi:10.1371/journal.pone.0023290 · Cited by 18

Controlling the Messenger: Regulated Translation of Maternal mRNAs in Xenopus laevis Development

Sheets, M. D., Fox, C. A., Dowdle, M. E., Blaser, S. I., Chung, A., & Park, S. (2016) · Advances in experimental medicine and biology · doi:10.1007/978-3-319-46095-6_2 · Cited by 17

Microtubule association of a neuronal RNA-binding protein HuD through its binding to the light chain of MAP1B

Fujiwara, Y., Kasashima, K., Saito, K., Fukuda, M., Fukao, A., Sasano, Y., Inoue, K., Fujiwara, T., & Sakamoto, H. (2011) · Biochimie · doi:10.1016/j.biochi.2011.01.008 · Cited by 18

NEDDylation in liver cancer: The regulation of the RNA binding protein Hu antigen R

Fernández‐Ramos, D., & Martínez‐Chantar, M. L. (2015) · Pancreatology · doi:10.1016/j.pan.2015.03.006 · Cited by 17

HuR Maintains a Replicative Life Span by Repressing the ARF Tumor Suppressor

Kawagishi, H., Hashimoto, M., Nakamura, H., Tsugawa, T., Watanabe, A., Kontoyiannis, D. L., & Sugimoto, M. (2013) · Molecular and Cellular Biology · doi:10.1128/mcb.01277-12 · Cited by 15

Chapter 20 Neurogenesis in Zebrafish Embryos

Chitnis, A. B., & Dawid, I. B. (1998) · Methods in cell biology · doi:10.1016/s0091-679x(08)61835-x · Cited by 17

RNA-binding proteins and neural development: a matter of targets and complexes

Agnès, F., & Perron, M. (2004) · Neuroreport · doi:10.1097/00001756-200412030-00001 · Cited by 17

ELAVL2 loss promotes aggressive mesenchymal transition in glioblastoma

Kim, Y., You, J. H., Ryu, Y., Park, G., Lee, U., Moon, H. E., Park, H. R., Song, C. W., Ku, J., Park, S., et al. (2024) · npj Precision Oncology · doi:10.1038/s41698-024-00566-1 · Cited by 16

Anti-HuC and -HuD autoantibodies are differential sero-diagnostic markers for small cell carcinoma from large cell neuroendocrine carcinoma of the lung

Sato, Y. (2012) · International Journal of Oncology · doi:10.3892/ijo.2012.1405 · Cited by 16

The Antidepressant Effect of Resveratrol Is Related to Neuroplasticity Mediated by the ELAVL4-Bdnf mRNA Pathway

Ge, H., Si, L., Li, C., Huang, J., Sun, L., Wu, L., Xie, Y., Xiao, L., & Wang, G. (2025) · International Journal of Molecular Sciences · doi:10.3390/ijms26031113 · Cited by 15

Antidepressant-like actions by silencing of neuronal ELAV-like RNA-binding proteins HuB and HuC in a model of depression in male mice

Sanna, M. D., Quattrone, A., & Galeotti, N. (2018) · Neuropharmacology · doi:10.1016/j.neuropharm.2018.04.001 · Cited by 15

Increased intraocular pressure alters the cellular distribution of HuR protein in retinal ganglion cells – A possible sign of endogenous neuroprotection failure

Smędowski, A., Liu, X., Podracka, L., Akhtar, S., Trzeciecka, A., Pietrucha‐Dutczak, M., Lewin‐Kowalik, J., Urtti, A. O., Ruponen, M., Kaarniranta, K., et al. (2017) · Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease · doi:10.1016/j.bbadis.2017.10.030 · Cited by 15

An Old Story with a New Twist: Do NMDAR1 mRNA Binding Proteins Regulate Expression of the NMDAR1 Receptor in the Presence of Alcohol?

KUMARI, M., & Anji, A. (2005) · Annals of the New York Academy of Sciences · doi:10.1111/j.1749-6632.2005.tb00039.x · Cited by 15

Regulation of ARE-mRNA Stability by Cellular Signaling: Implications for Human Cancer

Damgaard, C. K., & Lykke‐Andersen, J. (2013) · Cancer treatment and research · doi:10.1007/978-3-642-31659-3_7 · Cited by 13

HuB and HuD repress telomerase activity by dissociating HuR from TERC

Cheng, X., Gu, X., Xia, T., Ma, Z., Yang, Z., Feng, H. L., Zhao, Y. B., Ma, W., Ju, Z., Gorospe, M., et al. (2021) · Nucleic Acids Research · doi:10.1093/nar/gkab062 · Cited by 14

Complex Evolutionary Relationships Among Four Classes of Modular RNA-Binding Splicing Regulators in Eukaryotes: The hnRNP, SR, ELAV-Like and CELF Proteins

Tang, Y., Han, S. P., Kassahn, K. S., Skarshewski, A., Rothnagel, J. A., & Smith, R. (2012) · Journal of Molecular Evolution · doi:10.1007/s00239-012-9533-0 · Cited by 14

The Yeast RNA-binding Protein Rbp1p Modifies the Stability of Mitochondrial Porin mRNA

Buu, L.-M., Jang, L., & Lee, F.-J. S. (2003) · Journal of Biological Chemistry · doi:10.1074/jbc.m309278200 · Cited by 14

ElrA binding to the 3′UTR of cyclin E1 mRNA requires polyadenylation elements

Slevin, M. K., Gourronc, F. A., & Hartley, R. S. (2007) · Nucleic Acids Research · doi:10.1093/nar/gkm084 · Cited by 14

AUF1 and HuR: possible implications of mRNA stability in thyroid function and disorders

Trojanowicz, B., Dralle, H., & Hoang‐Vu, C. (2011) · Thyroid Research · doi:10.1186/1756-6614-4-s1-s5 · Cited by 14

C8orf46 homolog encodes a novel protein Vexin that is required for neurogenesis in Xenopus laevis

Moore, K. B., Logan, M. A., Aldiri, I., Roberts, J. M., Steele, M., & Vetter, M. L. (2018) · Developmental Biology · doi:10.1016/j.ydbio.2018.03.003 · Cited by 13

The expression of CPEB proteins is sequentially regulated during zebrafish oogenesis and embryogenesis

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Unraveling a new player in multiple sclerosis pathogenesis: The RNA-binding protein HuR

Pistono, C., Monti, M. C., Marchesi, N., Boiocchi, C., Campagnoli, L. I. M., Danila, M., Cuccia, M., Govoni, S. M., Montomoli, C., Mallucci, G., et al. (2020) · Multiple Sclerosis and Related Disorders · doi:10.1016/j.msard.2020.102048 · Cited by 13

XenopusElrB, but not ElrA, binds RNA as an oligomer: Possible role of the linker

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HuR Function and Translational State Analysis Following Global Brain Ischemia and Reperfusion

Szymanski, J. J., Wang, H., Jamison, J. T., & DeGracia, D. J. (2013) · Translational Stroke Research · doi:10.1007/s12975-013-0273-2 · Cited by 12

Post-transcriptional regulation of CD83 expression by AUF1 proteins

Ehlers, C., Schirmer, S., Kehlenbach, R. H., Hauber, J., & Chemnitz, J. (2012) · Nucleic Acids Research · doi:10.1093/nar/gks1069 · Cited by 11

Low level anti-Hu reactivity: A risk marker for small cell lung cancer?

Tsou, J. A., Kazarian, M., Patel, A., Galler, J. S., Laird‐Offringa, I. A., Carpenter, C. L., & London, S. J. (2008) · Cancer Detection and Prevention · doi:10.1016/j.cdp.2008.06.006 · Cited by 11

Embryonic lethal abnormal vision proteins and adenine and uridine-rich element mRNAs after global cerebral ischemia and reperfusion in the rat

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Subcellular Distribution of Xenopus XEL-1 Protein, a Member of the Neuron-Specific ELAV/Hu Family, Revealed by Epitope Tagging

Perron, M., BOURLITIO, P., Wegnez, M. R., & Théodore, L. (1997) · DNA and Cell Biology · doi:10.1089/dna.1997.16.579 · Cited by 11

ELAVL1a is an immunocompetent protein that protects zebrafish embryos from bacterial infection

Ni, S., Zhou, Y., Song, L., Chen, Y., Wang, X., Du, X., & Zhang, S. (2021) · Communications Biology · doi:10.1038/s42003-021-01777-z · Cited by 10

Sex Determination Cascade in Insects: A Great Treasure House of Alternative Splicing

Suzuki, M. G. (2018) · Diversity and commonality in animals · doi:10.1007/978-4-431-56609-0_13 · Cited by 10

Establishment and characterization of an anoxia-tolerant cell line, PSU-AL-WS40NE, derived from an embryo of the annual killifish Austrofundulus limnaeus

Riggs, C. L., Le, R., Kültz, D., Zajic, D. E., Summers, A., Alvarez, L., & Podrabsky, J. E. (2019) · Comparative Biochemistry and Physiology Part B Biochemistry and Molecular Biology · doi:10.1016/j.cbpb.2019.02.008 · Cited by 10

The neural ELAVL protein HuB enhances endogenous proto-oncogene activation

Hatanaka, T., Higashino, F., Tei, K., & Yasuda, M. (2019) · Biochemical and Biophysical Research Communications · doi:10.1016/j.bbrc.2019.07.089 · Cited by 10

Identification of Compounds Targeting HuD. Another Brick in the Wall of Neurodegenerative Disease Treatment

Ambrosio, F. A., Coricello, A., Costa, G., Lupia, A., Micaelli, M., Marchesi, N., Sala, F., Pascale, A., Rossi, D., Vasile, F., et al. (2021) · Journal of Medicinal Chemistry · doi:10.1021/acs.jmedchem.1c00191 · Cited by 9

Human antigen R: Exploring its inflammatory response impact and significance in cardiometabolic disorders

Abdelsalam, S. S., Ghanem, S. K., Zahid, M., Abunada, H. H., Bader, L., Raïq, H., Khan, A., Parray, A., Djouhri, L., & Agouni, A. (2024) · Journal of Cellular Physiology · doi:10.1002/jcp.31229 · Cited by 9

Influence of the 3'-UTR-length of mKIAA cDNAs and their Sequence Features to the mRNA Expression Level in the Brain

Okazaki, N., Imai, K., Kikuno, R. F., Misawa, K., Kawai, M., Inamoto, S., Ohara, R., Nagase, T., Ohara, O., & Koga, H. (2005) · DNA Research · doi:10.1093/dnares/dsi001 · Cited by 8

Detection of HuD transcripts by means of reverse transcriptase and polymerase chain reaction: implications for the detection of minimal residual disease in patients with small cell lung cancer

Torà, M. (2000) · Cancer Letters · doi:10.1016/s0304-3835(00)00577-2 · Cited by 8

HuR enhances FSTL1 transcript stability to promote invasion and metastasis of squamous cell carcinoma.

Sundaram, G. M., Quah, S., Guang, L. G., & Sampath, P. (2021) · Europe PMC (PubMed Central) · Cited by 7

Stabilization of Cellular mRNAs and Up-Regulation of Proteins by Oligoribonucleotides Homologous to the Bcl2 Adenine-Uridine Rich Element Motif

Bevilacqua, A., Ghisolfi, L., Franzi, S., Maresca, G., Gherzi, R., Capaccioli, S., Nicolin, A., & Canti, G. L. (2006) · Molecular Pharmacology · doi:10.1124/mol.106.029041 · Cited by 7

Brain Morphogenesis and Developmental Neurotoxicology

Jensen, K. F., & Olin, J. K. (2018) · Elsevier eBooks · doi:10.1016/b978-0-12-809405-1.00001-8 · Cited by 7

Short- and Long-Term Regulation of HuD: A Molecular Switch Mediated by Folic Acid?

Marchesi, N., Linciano, P., Campagnoli, L. I. M., Fahmideh, F., Rossi, D., Costa, G., Ambrosio, F. A., Barbieri, A., Collina, S., & Pascale, A. (2023) · International Journal of Molecular Sciences · doi:10.3390/ijms241512201 · Cited by 6

tiRNA-HAR contributes to ischemic myocardial injury via facilitating HuR-mediated stability of p53

Wang, C., Gao, Y., Liu, K., Zhang, Y., Sun, Z., Huang, M. J., Qu, Z., Yu, S., Han, J., Mei, Z., et al. (2025) · Translational research · doi:10.1016/j.trsl.2025.04.002 · Cited by 6

Characterization of Two Promoters of the Xenopus laevis elrD Gene

Nassar, F., & Wegnez, M. (2001) · Biochemical and Biophysical Research Communications · doi:10.1006/bbrc.2001.4812 · Cited by 6

Including the p53 ELAV‐like protein‐binding site in vector cassettes enhances transgene expression in rat submandibular gland

Zheng, C., & Baum, B. J. (2011) · Oral Diseases · doi:10.1111/j.1601-0825.2011.01895.x · Cited by 6

Tissue‐specific promoter usage and diverse splicing variants of found in neurons , an ancestral H u/ ELAV ‐like RNA ‐binding protein gene of insects, in the direct‐developing insect G ryllus bimaculatus

Watanabe, T., & Aonuma, H. (2013) · Insect Molecular Biology · doi:10.1111/imb.12057 · Cited by 7

Regulation of mRNA Turnover by Cellular Stress

Srikantan, S., & Gorospe, M. (2010) · Elsevier eBooks · doi:10.1016/b978-0-12-374145-5.00270-9 · Cited by 6

Triciribine Engages ZFP36L1 and HuR to Stabilize LDLR mRNA

Sundvold, H. (2020) · Molecules · doi:10.3390/molecules25194505 · Cited by 5

Identification and functional characterization of zebrafish ELAVL1b as a new member of antimicrobial protein

Zhou, Y., Chen, L., & Ni, S. (2023) · Fish & Shellfish Immunology · doi:10.1016/j.fsi.2023.108671 · Cited by 4

Visualisation of gene expression within the context of tissues using an X-ray computed tomography-based multimodal approach

Kairišs, K., Sokolova, N., Žílová, L., Schlagheck, C., Reinhardt, R., Baumbach, T., Faragó, T., van de Kamp, T., Wittbrodt, J., & Weinhardt, V. (2024) · Scientific Reports · doi:10.1038/s41598-024-58766-5 · Cited by 4

Identification and Characterization of an RRM-Containing, RNA Binding Protein in Acinetobacter baumannii

Ciani, C., Pérez‐Ràfols, A., Bonomo, I., Micaelli, M., Esposito, A., Zucal, C., Belli, R., D’Agostino, V., Bianconi, I., Calderone, V., et al. (2022) · Biomolecules · doi:10.3390/biom12070922 · Cited by 4

Analysis of RNA Interference Targeted Against Human Antigen R (HuR) to Reduce Vascular Endothelial Growth Factor (VEGF) Protein Expression in Human Retinal Pigment Epithelial Cells

Supe, S., Dighe, V. D., Upadhya, A., & Singh, K. (2023) · Molecular Biotechnology · doi:10.1007/s12033-023-00913-w · Cited by 3

Multiple sequences and factors are involved in stability/degradation of Awnt‐1, Awnt‐5A and Awnt‐5B mRNAs during axolotl development

Caulet, S., Pelczar, H., & Andéol, Y. (2010) · Development Growth & Differentiation · doi:10.1111/j.1440-169x.2009.01156.x · Cited by 3

The Expanding Role of RNA-Binding Proteins in Neurodegeneration

Maurya, B., Surabhi, S., Pandey, P., Mukherjee, A., & Mutsuddi, M. (2019) · Springer eBooks · doi:10.1007/978-981-13-2218-1_13 · Cited by 3

Characterization of 3'-untranslated region of the mouse GDNF gene

Oh‐hashi, K., Hirata, Y., & Kiuchi, K. (2012) · BMC Molecular Biology · doi:10.1186/1471-2199-13-2 · Cited by 3

Parkinson's Disease and Amyotrophic Lateral Sclerosis

Mosley, R. L., Reynolds, A. D., Stone, D. K., & Gendelman, H. E. (2008) · Springer eBooks · doi:10.1007/978-0-387-72573-4_44 · Cited by 3

Large-scale identification of RBP-RNA interactions by RAPseq refines essentials of post-transcriptional gene regulationPreprint

Atanasoai, I., Papavasileiou, S., Preiß, N., & Kutter, C. (2021) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2021.11.08.467743 · Cited by 3

HuR-Targeted Small-Molecule Inhibitors─Beneficial Impact in Cancer Therapy

Rzeszutek, I., & Nowak‐Król, A. (2025) · Journal of Medicinal Chemistry · doi:10.1021/acs.jmedchem.5c01487 · Cited by 2

Established and emerging new approach methodologies in neuroscience

Imberechts, D., Ny, A., & Copmans, D. (2025) · Frontiers in Neuroscience · doi:10.3389/fnins.2025.1696937 · Cited by 4

Neuronal Nuclear Autoantibodies, Type 1 (Hu)

Furneaux, H. M. (1996) · Elsevier eBooks · doi:10.1016/b978-044482383-0/50085-6 · Cited by 2

Expression of β2 adrenoceptors within enteric neurons of the horse ileum

Bombardi, C., Grandis, A., Gardini, A., Sorteni, C., Clavenzani, P., & Chiocchetti, R. (2013) · Research in Veterinary Science · doi:10.1016/j.rvsc.2013.07.006 · Cited by 2

Immunotherapies for Movement Disorders: Parkinson’s Disease and Amyotrophic Lateral Sclerosis

Schutt, C. R., Gendelman, H. E., & Mosley, R. L. (2016) · Springer eBooks · doi:10.1007/978-3-319-44022-4_46 · Cited by 2

Sex Lethal Gene Manipulates Gonadal Development of Medaka, Oryzias latipes, through Estrogenic Interventions

Chakraborty, T., Mohapatra, S., Matsuyama, M., Nagahama, Y., & Ohta, K. (2022) · International Journal of Molecular Sciences · doi:10.3390/ijms232415496 · Cited by 2

Genomes and developmental control

Olson, E. N. (2003) · Developmental Biology · doi:10.1016/j.ydbio.2003.11.001 · Cited by 2

Dicer is essential for proper maturation, composition, and function in the postnatal retina

Kang, S., Larbi, D., Bruns, E., Hahne, K., Khodadadi‐Jamayran, A., Sreenivasaiah, C., Carneiro, M. L., Andrade, M., Batsuuri, K., Chen, S., et al. (2025) · iScience · doi:10.1016/j.isci.2025.113794 · Cited by 1

Müller Glia Subtypes Define Neuro‐Glial Associations and Spatial Morphogen Axes in the Zebrafish Retina

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RAPseq enables large-scale identification of RBP–RNA interactions and reveals essentials of post-transcriptional gene regulation

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