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Lipid Binding-induced Conformational Change in Human Apolipoprotein E
Open accessAbstract
Apolipoprotein (apo) E contains two structural domains, a 22-kDa (amino acids 1-191) N-terminal domain and a 10-kDa (amino acids 223-299) C-terminal domain. To better understand apoE-lipid interactions on lipoprotein surfaces, we determined the thermodynamic parameters for binding of apoE4 and its 22- and 10-kDa fragments to triolein-egg phosphatidylcholine emulsions using a centrifugation assay and titration calorimetry. In both large (120 nm) and small (35 nm) emulsion particles, the binding affinities decreased in the order 10-kDa fragment approximately 34-kDa intact apoE4 > 22-kDa fragment, whereas the maximal binding capacity of intact apoE4 was much larger than those of the 22- and 10-kDa fragments. These results suggest that at maximal binding, the binding behavior of intact apoE4 is different from that of each fragment and that the N-terminal domain of intact apoE4 does not contact lipid. Isothermal titration calorimetry measurements showed that apoE binding to emulsions was an exothermic process. Binding to large particles is enthalpically driven, and binding to small particles is entropically driven. At a low surface concentration of protein, the binding enthalpy of intact apoE4 (-69 kcal/mol) was approximately equal to the sum of the enthalpies for the 22- and 10-kDa fragments, indicating that both the 22- and 10-kDa fragments interact with lipids. In a saturated condition, however, the binding enthalpy of intact apoE4 (-39 kcal/mol) was less exothermic and rather similar to that of each fragment, supporting the hypothesis that only the C-terminal domain of intact apoE4 binds to lipid. We conclude that the N-terminal four-helix bundle can adopt either open or closed conformations, depending upon the surface concentration of emulsion-bound apoE.
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“ApoE variants with lower thermodynamic stability and changes in conformational plasticity have been shown to have altered interdomain interactions and defective physiological functions (19, 24 -28).”
From Molecular Basis for Increased Risk for Late-onset Alzheimer Disease Due to the Naturally Occurring L28P Mutation in Apolipoprotein E4 (2014) · cites this paper as [26]
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“whereas the C-terminal domain contains amphipathic α-helices that are involved in binding to lipoproteins with high affinity (21, 22).”
From Role of the N- and C-Terminal Domains in Binding of Apolipoprotein E Isoforms to Heparan Sulfate and Dermatan Sulfate: A Surface Plasmon Resonance Study (2008) · cites this paper as [22]
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Citations
Cites
PROTEIN MEASUREMENT WITH THE FOLIN PHENOL REAGENT
Lowry, O. H., Rosebrough, N., Farr, A. L., & Randall, R. (1951) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(19)52451-6 · Cited by 316,200
The Metabolic and Molecular Bases of Inherited Disease
Scriver, R. C. (1995) · Medical Entomology and Zoology · Cited by 12,101
Apolipoprotein E: Cholesterol Transport Protein with Expanding Role in Cell Biology
Mahley, R. W. (1988) · Science · doi:10.1126/science.3283935 · Cited by 4,028
Apolipoprotein E: Structure-Function Relationships
Weisgraber, K. H. (1994) · Advances in Protein Chemistry · doi:10.1016/s0065-3233(08)60642-7 · Cited by 830
Self-citationMahley, R. W., & Ji, Z.-S. (1999) · Journal of Lipid Research · doi:10.1016/s0022-2275(20)33334-4 · Cited by 693
Three-Dimensional Structure of the LDL Receptor-Binding Domain of Human Apolipoprotein E
Wilson, C., Wardell, M. R., Weisgraber, K. H., Mahley, R. W., & Agard, D. A. (1991) · Science · doi:10.1126/science.2063194 · Cited by 678
Self-citationKowal, R. C., Herz, J., Weisgraber, K. H., Mahley, R. W., Brown, M. S., & Goldstein, J. L. (1990) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)87014-4 · Cited by 445
Self-citationWindler, E., Chao, Y., & Havel, R. J. (1980) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(19)70647-4 · Cited by 365
Human apolipoprotein E: the Alzheimer's disease connection
Weisgraber, K. H., & Mahley, R. W. (1996) · The FASEB Journal · doi:10.1096/fasebj.10.13.8940294 · Cited by 327
Self-citationHigh Density Lipoproteins and Atherosclerosis
Miller, G. J. (1980) · Annual Review of Medicine · doi:10.1146/annurev.me.31.020180.000525 · Cited by 325
Dong, L. M., Wilson, C., Wardell, M. R., Simmons, T., Mahley, R. W., Weisgraber, K. H., & Agard, D. A. (1994) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(17)31797-0 · Cited by 320
Self-citationHuman Apolipoprotein E4 Domain Interaction
Dong, L.-M., & Weisgraber, K. H. (1996) · Journal of Biological Chemistry · doi:10.1074/jbc.271.32.19053 · Cited by 318
Self-citationWindler, E. E. T., & Havel, R. J. (1985) · Journal of Lipid Research · doi:10.1016/s0022-2275(20)34342-x · Cited by 314
Weisgraber, K. H. (1990) · Journal of Lipid Research · doi:10.1016/s0022-2275(20)42621-5 · Cited by 304
Self-citationInnerarity, T. L., Pitas, R. E., & Mahley, R. W. (1979) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)50713-4 · Cited by 246
Weisgraber, K. H., Mahley, R. W., Kowal, R. C., Herz, J., Goldstein, J. L., & Brown, M. S. (1990) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)45726-2 · Cited by 234
Self-citation[50] Protein labeling by reductive alkylation
Jentoft, N., & Dearborn, D. G. (1983) · Methods in enzymology on CD-ROM/Methods in enzymology · doi:10.1016/s0076-6879(83)91052-2 · Cited by 208
Titration calorimetry of lipid–peptide interactions
Seelig, J. (1997) · Biochimica et Biophysica Acta (BBA) - Reviews on Biomembranes · doi:10.1016/s0304-4157(97)00002-6 · Cited by 206
Nagle, J. F., & Tristram‐Nagle, S. (2000) · Current Opinion in Structural Biology · doi:10.1016/s0959-440x(00)00117-2 · Cited by 205
Westerlund, J. A., & Weisgraber, K. H. (1993) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)82318-3 · Cited by 164
Self-citationGianturco, S. H., Gotto, A. M., Hwang, S. L., Karlin, J. B., Lin, A., Prasad, S. C., & Bradley, W. A. (1983) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)32655-3 · Cited by 162
Molecular basis of exchangeable apolipoprotein function
Narayanaswami, V., & Ryan, R. O. (2000) · Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids · doi:10.1016/s1388-1981(99)00176-6 · Cited by 152
Effect of lipid particle size on association of apolipoproteins with lipid.
Tajima, S., Yokoyama, S., & Yamamoto, A. (1983) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(17)44607-2 · Cited by 134
Behavior of human apolipoprotein E in aqueous solutions and at interfaces.
Yokoyama, S., Kawai, Y., Tajima, S., & Yamamoto, A. (1985) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(17)36247-6 · Cited by 114
Binding of the antibacterial peptide magainin 2 amide to small and large unilamellar vesicles
Wieprecht, T., Apostolov, O., & Seelig, J. (2000) · Biophysical Chemistry · doi:10.1016/s0301-4622(00)00120-4 · Cited by 109
Lipid binding-induced conformational changes in the N-terminal domain of human apolipoprotein E
Fisher, C. A., & Ryan, R. O. (1999) · Journal of Lipid Research · doi:10.1016/s0022-2275(20)33343-5 · Cited by 95
Functional Characterization of Apolipoprotein E Isoforms Overexpressed in Escherichia coli
Morrow, J. A., Arnold, K. S., & Weisgraber, K. H. (1999) · Protein Expression and Purification · doi:10.1006/prep.1999.1069 · Cited by 94
Self-citationLu, B., Morrow, J. A., & Weisgraber, K. H. (2000) · Journal of Biological Chemistry · doi:10.1074/jbc.m003508200 · Cited by 89
The Low Density Lipoprotein Receptor Active Conformation of Apolipoprotein E
Raussens, V., Fisher, C. A., Goormaghtigh, E., Ryan, R. O., & Ruysschaert, J. (1998) · Journal of Biological Chemistry · doi:10.1074/jbc.273.40.25825 · Cited by 88
Fisher, C. A., Narayanaswami, V., & Ryan, R. O. (2000) · Journal of Biological Chemistry · doi:10.1074/jbc.m002643200 · Cited by 78
Effects of lipid composition and packing on the adsorption of apolipoprotein A-I to lipid monolayers
Ibdah, J. A., & Phillips, M. C. (1988) · Biochemistry · doi:10.1021/bi00418a073 · Cited by 73
Self-citationSchwiegelshohn, B., Presley, J. F., Gorecki, M., Vogel, T., Carpentier, Y., Maxfield, F. R., & Deckelbaum, R. J. (1995) · Journal of Biological Chemistry · doi:10.1074/jbc.270.4.1761 · Cited by 64
Sehayek, E., Lewin-Velvert, U., Chajek‐Shaul, T., & Eisenberg, S. (1991) · Journal of Clinical Investigation · doi:10.1172/jci115339 · Cited by 60
Effect of cholesterol on apolipoprotein A-I binding to lipid bilayers and emulsions
Saito, H., Miyako, Y., Handa, T., & Miyajima, K. (1997) · Journal of Lipid Research · doi:10.1016/s0022-2275(20)37441-1 · Cited by 60
Self-citationSaito, H., Minamida, T., Arimoto, I., Handa, T., & Miyajima, K. (1996) · Journal of Biological Chemistry · doi:10.1074/jbc.271.26.15515 · Cited by 57
Self-citationBorensztajn, J., Getz, G. S., & Kotlar, T. J. (1988) · Journal of Lipid Research · doi:10.1016/s0022-2275(20)38471-6 · Cited by 54
Effects of Lipid Interaction on the Lysine Microenvironments in Apolipoprotein E
Lund‐Katz, S., Zaiou, M., Wehrli, S. L., Dhanasekaran, P., Baldwin, F., Weisgraber, K. H., & Phillips, M. C. (2000) · Journal of Biological Chemistry · doi:10.1074/jbc.m005265200 · Cited by 54
Self-citationHepatic lipase treatment of chylomicron remnants increases exposure of apolipoprotein E.
Brasaemle, D. L., Cornely-Moss, K., & Bensadoun, A. (1993) · Journal of Lipid Research · doi:10.1016/s0022-2275(20)40737-0 · Cited by 53
Pauw, M. D., Vanloo, B., Weisgraber, K. H., & Rosseneu, M. (1995) · Biochemistry · doi:10.1021/bi00034a030 · Cited by 50
Self-citationSegelke, B. W., Forstner, M., Knapp, M., Trakhanov, S. D., Parkin, S., Newhouse, Y. M., Bellamy, H. D., Weisgraber, K. H., & Rupp, B. (2000) · Protein Science · doi:10.1110/ps.9.5.886 · Cited by 47
Self-citationInteraction of class A amphipathic helical peptides with phospholipid unilamellar vesicles
Gazzara, J. A., Phillips, M. C., Lund‐Katz, S., Palgunachari, M. N., Segrest, J. P., Anantharamaiah, G. M., & Snow, J. W. (1997) · Journal of Lipid Research · doi:10.1016/s0022-2275(20)37143-1 · Cited by 45
Self-citationSurface Properties of Native Human Plasma Lipoproteins and Lipoprotein Models
Massey, J. B., & Pownall, H. J. (1998) · Biophysical Journal · doi:10.1016/s0006-3495(98)74010-x · Cited by 43
Conformation of apolipoprotein E in lipoproteins.
Lund‐Katz, S., Weisgraber, K. H., Mahley, R. W., & Phillips, M. C. (1993) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(19)49418-0 · Cited by 40
Self-citationEffects of polymorphism on the microenvironment of the LDL receptor-binding region of human apoE
Lund-Katz, S., Wehrli, S., Zaiou, M., Newhouse, Y., Weisgraber, K. H., & Phillips, M. C. (2001) · Journal of Lipid Research · doi:10.1016/s0022-2275(20)31612-6 · Cited by 40
Self-citationEffect of vesicle size on their interaction with class A amphipathic helical peptides
Gazzara, J. A., Phillips, M. C., Lund‐Katz, S., Palgunachari, M. N., Segrest, J. P., Anantharamaiah, G. M., Rodrigueza, W. V., & Snow, J. W. (1997) · Journal of Lipid Research · doi:10.1016/s0022-2275(20)37144-3 · Cited by 39
Self-citationDerksen, A., & SMALL, D. M. (1989) · Biochemistry · doi:10.1021/bi00428a074 · Cited by 34
Calorimetry of apolipoprotein-A1 binding to phosphatidylcholine-triolein-cholesterol emulsions
Derksen, A., Gantz, D., & SMALL, D. M. (1996) · Biophysical Journal · doi:10.1016/s0006-3495(96)79574-7 · Cited by 27
Dong, L., Innerarity, T. L., Arnold, K. S., Newhouse, Y. M., & Weisgraber, K. H. (1998) · Journal of Lipid Research · doi:10.1016/s0022-2275(20)32541-4 · Cited by 26
Self-citationSaito, H., Tanaka, M., Okamura, E., Kimura, T., Nakahara, M., & Handa, T. (2001) · Langmuir · doi:10.1021/la001583t · Cited by 22
Self-citationKypreos, K. E., Morani, P., van Dijk, K. W., Havekes, L. M., & Zannis, V. I. (2001) · Biochemistry · doi:10.1021/bi002414a · Cited by 22
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Hatters, D. M., Peters-Libeu, C. A., & Weisgraber, K. H. (2006) · Trends in Biochemical Sciences · doi:10.1016/j.tibs.2006.06.008 · Cited by 583
Self-citationChertova, E., Chertov, O., Coren, L. V., Roser, J. D., Trubey, C. M., Bess, J. W., Sowder, R. C., Barsov, E., Hood, B. L., Fisher, R. J., et al. (2006) · Journal of Virology · doi:10.1128/jvi.01013-06 · Cited by 462
Apolipoprotein E isoforms and lipoprotein metabolism
Phillips, M. C. (2014) · IUBMB Life · doi:10.1002/iub.1314 · Cited by 328
Self-citationApolipoprotein E: From lipid transport to neurobiology
Hauser, P. S., Narayanaswami, V., & Ryan, R. O. (2011) · Progress in Lipid Research · doi:10.1016/j.plipres.2010.09.001 · Cited by 320
Govindpani, K., McNamara, L. G., Smith, N. R., Vinnakota, C., Waldvogel, H. J., Faull, R. L. M., & Kwakowsky, A. (2019) · Journal of Clinical Medicine · doi:10.3390/jcm8050651 · Cited by 279
Metadata
- Authors
- Saito, H., Dhanasekaran, P., Baldwin, F., Weisgraber, K. H., Lund-Katz, S., & Phillips, M. C.
- Affiliations
- Children's Hospital of Philadelphia (US)
- University of California, San Francisco (US)
- Corresponding author
- Phillips, Michael C.
- Venue
- Journal of Biological Chemistry
- Publisher
- Elsevier BV
- Published
- 2001-11
- Volume
- 276
- Issue
- 44
- Pages
- 40949-40954
- ISSN
- 0021-9258 (ISSN-L)
- OpenAlex
- W2006324786
- Cited by
- 113
- References
- 50
- Citations by year
- 2026: 1 · 2025: 1 · 2024: 4 · 2023: 1 · 2022: 2 · 2021: 3 · 2020: 5 · 2019: 4 · 2018: 5 · 2017: 3 · 2015: 1 · 2014: 6 · 2013: 3 · 2012: 5
- FWCI
- 2.79
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Journal of Biological Chemistry (publishedVersion, cc-by)
- PubMed (publishedVersion)
- Funders
- National Institutes of Health
- National Heart, Lung, and Blood Institute (HL-41633, P01HL041633, R01HL056083, HL-56083)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Lipid Membrane Structure and Behavior
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Interaction Studies and Fluorescence Analysis
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Structure and Dynamics
- Keywords
- apolipoprotein E, APOE ε4, lipid binding, conformational change, C-terminal domain, N-terminal domain, four-helix bundle, binding thermodynamics, binding enthalpy, binding entropy, protein-lipid interactions
- MeSH terms
- Apolipoproteins E, Calorimetry, Humans, Protein Conformation, Thermodynamics, Lipid Metabolism
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