FANCJ Is a Structure-specific DNA Helicase Associated with the Maintenance of Genomic G/C Tracts
Open accessAbstract
Fanconi anemia (FA) is a heritable human cancer-susceptibility disorder, delineating a genetically heterogenous pathway for the repair of replication-blocking lesions such as interstrand DNA cross-links. Here we demonstrate that one component of this pathway, FANCJ, is a structure-specific DNA helicase that dissociates guanine quadruplex DNA (G4 DNA) in vitro. Moreover, in contrast with previously identified G4 DNA helicases, such as the Bloom's helicase (BLM), FANCJ unwinds G4 substrates with 5'-3' polarity. In the FA-J human patient cell line EUFA0030 the loss of FANCJ G4 unwinding function correlates with the accumulation of large genomic deletions in the vicinity of sequences, which match the G4 DNA signature. Together these findings support a role for FANCJ in the maintenance of potentially unstable genomic G/C tracts during replication.
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FA-J patient cells accumulate deletions in regions containing G4-DNA, and recombinant FANCJ A349P fails to unwind G4-DNA substrates.
“In support of this function, FA-J patient cells accumulate deletions in regions containing G4-DNA, and the recombinant FANCJ A349P mutant protein fails to unwind G4-DNA substrates [42,79].”
From Hereditary Breast Cancer and the BRCA1-Associated FANCJ/BACH1/BRIP1 (2011) · cites this paper as [79]
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Cites
Sen, D., & Gilbert, W. (1988) · Nature · doi:10.1038/334364a0 · Cited by 1,668 · see citing works
Prevalence of quadruplexes in the human genome
Huppert, J., & Balasubramanian, S. (2005) · Nucleic Acids Research · doi:10.1093/nar/gki609 · Cited by 1,655 · see citing works
Self-citationThe Bloom's syndrome helicase suppresses crossing over during homologous recombination
Wu, L., & Hickson, I. D. (2003) · Nature · doi:10.1038/nature02253 · Cited by 1,087 · see citing works
Self-citationThe Breast Cancer Susceptibility Collaboration (UK), Seal, S., Thompson, D., Renwick, A., Elliott, A., Kelly, P., Barfoot, R., Chagtai, T., Jayatilake, H., Ahmed, M., et al. (2006) · Nature Genetics · doi:10.1038/ng1902 · Cited by 746 · see citing works
A sodium-potassium switch in the formation of four-stranded G4-DNA
Sen, D., & Gilbert, W. (1990) · Nature · doi:10.1038/344410a0 · Cited by 730 · see citing works
Cantor, S. B., Bell, D. W., Ganesan, S., Kass, E. M., Drapkin, R., Grossman, S., Wahrer, D. C. R., Sgroi, D. C., Lane, W. S., Haber, D. A., et al. (2001) · Cell · doi:10.1016/s0092-8674(01)00304-x · Cited by 674 · see citing works
The Bloom's and Werner's syndrome proteins are DNA structure-specific helicases
Mohaghegh, P. (2001) · Nucleic Acids Research · doi:10.1093/nar/29.13.2843 · Cited by 599 · see citing works
The emerging genetic and molecular basis of Fanconi anaemia
Joenje, H., & Patel, K. J. (2001) · Nature Reviews Genetics · doi:10.1038/35076590 · Cited by 566 · see citing works
The Bloom’s Syndrome Helicase Unwinds G4 DNA*
Sun, H., Karow, J. K., Hickson, I., & Maizels, N. (1998) · Journal of Biological Chemistry · doi:10.1074/jbc.273.42.27587 · Cited by 552 · see citing works
Self-citationTelomere end-binding proteins control the formation of G-quadruplex DNA structures in vivo
Paeschke, K., Simonsson, T., Postberg, J., Rhodes, D., & Lipps, H. J. (2005) · Nature Structural & Molecular Biology · doi:10.1038/nsmb982 · Cited by 531 · see citing works
Quadruplex structure of Oxytricha telomeric DNA oligonucleotides
Smith, F. W., & Feigon, J. F. (1992) · Nature · doi:10.1038/356164a0 · Cited by 523 · see citing works
The DNA helicase BRIP1 is defective in Fanconi anemia complementation group J
Levitus, M., Waisfisz, Q., Godthelp, B. C., Vries, Y. D., Hussain, S., Wiegant, W. W., Elghalbzouri-Maghrani, E., Steltenpool, J., Rooimans, M. A., Pals, G., et al. (2005) · Nature Genetics · doi:10.1038/ng1625 · Cited by 432 · see citing works
Self-citationWu, Y., Shin-ya, K., & Brosh, R. M. (2008) · Molecular and Cellular Biology · doi:10.1128/mcb.02210-07 · Cited by 428 · see citing works
Litman, R., Peng, M., Jin, Z., Zhang, F., Zhang, J., Powell, S., Andreassen, P. R., & Cantor, S. B. (2005) · Cancer Cell · doi:10.1016/j.ccr.2005.08.004 · Cited by 396 · see citing works
The BRCA1-interacting helicase BRIP1 is deficient in Fanconi anemia
Levran, O., Attwooll, C., Henry, R. T., Milton, K. L., Neveling, K., Rio, P., Batish, S. D., Kalb, R., Velleuer, E., Barral, S., et al. (2005) · Nature Genetics · doi:10.1038/ng1624 · Cited by 370 · see citing works
Regulation of Murine Telomere Length by Rtel
Ding, H., Schertzer, M., Wu, X., Gertsenstein, M., Selig, S., Kammori, M., Pourvali, R., Poon, S., Vulto, I., Chavez, E., et al. (2004) · Cell · doi:10.1016/j.cell.2004.05.026 · Cited by 309 · see citing works
Activation of the E3 ligase function of the BRCA1/BARD1 complex by polyubiquitin chains
Mallery, D. L., Vandenberg, C. J., & Hiom, K. (2002) · The EMBO Journal · doi:10.1093/emboj/cdf691 · Cited by 280 · see citing works
Self-citationDisruption of dog-1 in Caenorhabditis elegans triggers deletions upstream of guanine-rich DNA
Cheung, I. K., Schertzer, M. J., Rose, A. M., & Lansdorp, P. M. (2002) · Nature Genetics · doi:10.1038/ng928 · Cited by 270 · see citing works
Cantor, S., Drapkin, R., Zhang, F., Lin, Y., Han, J., Pamidi, S., & Livingston, D. M. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0308717101 · Cited by 240 · see citing works
Role for BLM in replication-fork restart and suppression of origin firing after replicative stress
Davies, S. L., North, P. S., & Hickson, I. D. (2007) · Nature Structural & Molecular Biology · doi:10.1038/nsmb1267 · Cited by 234 · see citing works
Self-citationMutagenic Capacity of Endogenous G4 DNA Underlies Genome Instability in FANCJ-Defective C. elegans
Kruisselbrink, E., Guryev, V., Brouwer, K., Pontier, D. B., Cuppen, E., & Tijsterman, M. (2008) · Current Biology · doi:10.1016/j.cub.2008.05.013 · Cited by 209 · see citing works
Bridge, W. L., Vandenberg, C. J., Franklin, R., & Hiom, K. J. (2005) · Nature Genetics · doi:10.1038/ng1627 · Cited by 208 · see citing works
Self-citationNovel DNA superstructures formed by telomere-like oligomers
Sen, D., & Gilbert, W. (1992) · Biochemistry · doi:10.1021/bi00116a011 · Cited by 175 · see citing works
Uncoupling DNA translocation and helicase activity in PcrA: direct evidence for an active mechanism
Soultanas, P., Dillingham, M. S., Wiley, P., Webb, M. R., & Wigley, D. B. (2000) · The EMBO Journal · doi:10.1093/emboj/19.14.3799 · Cited by 147 · see citing works
Analysis of the DNA Substrate Specificity of the Human BACH1 HelicaseAssociated with BreastCancer
Gupta, R., Sharma, S., Sommers, J. A., Jin, Z., Cantor, S. B., & Brosh, R. M. (2005) · Journal of Biological Chemistry · doi:10.1074/jbc.m501995200 · Cited by 131 · see citing works
Youds, J. L., Barber, L. J., Ward, J. D., Collis, S. J., O’Neil, N. J., Boulton, S. J., & Rose, A. M. (2007) · Molecular and Cellular Biology · doi:10.1128/mcb.01641-07 · Cited by 102 · see citing works
Self-citationYouds, J. L., O'Neil, N. J., & Rose, A. (2006) · Genetics · doi:10.1534/genetics.106.056879 · Cited by 82 · see citing works
Spectrum of mutational events in the absence of DOG-1/FANCJ in Caenorhabditis elegans
Zhao, Y., Tarailo‐Graovac, M., O’Neil, N. J., & Rose, A. M. (2008) · DNA repair · doi:10.1016/j.dnarep.2008.07.011 · Cited by 27 · see citing works
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- [28]Br6192idge WL Vandenberg CJ Franklin RJ Hiom K Nat. Genet 2005 37 953 957 16116421
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Prakash, R., Zhang, Y., Feng, W., & Jasin, M. (2015) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a016600 · Cited by 869 · see citing works
Small-molecule–induced DNA damage identifies alternative DNA structures in human genes
Rodriguez, R., Miller, K. M., Forment, J. V., Bradshaw, C. R., Nikan, M., Britton, S., Oelschlaegel, T., Xhemalce, B., Balasubramanian, S., & Jackson, S. P. (2012) · Nature Chemical Biology · doi:10.1038/nchembio.780 · Cited by 741 · see citing works
Self-citationAguilera, A., & García-Muse, T. (2013) · Annual Review of Genetics · doi:10.1146/annurev-genet-111212-133232 · Cited by 476 · see citing works
G-quadruplex unwinding helicases and their function <i>in vivo</i>
Sauer, M., & Paeschke, K. (2017) · Biochemical Society Transactions · doi:10.1042/bst20170097 · Cited by 179 · see citing works
BACH1/FANCJ Acts with TopBP1 and Participates Early in DNA Replication Checkpoint Control
Gong, Z., Kim, J.-E., Leung, C. C. Y., Glover, J. N. M., & Chen, J. (2010) · Molecular Cell · doi:10.1016/j.molcel.2010.01.002 · Cited by 160 · see citing works
Hereditary Breast Cancer and the BRCA1-Associated FANCJ/BACH1/BRIP1
Cantor, S. B., & Guillemette, S. (2011) · Future Oncology · doi:10.2217/fon.10.191 · Cited by 106 · see citing works
“In support of this function, FA-J patient cells accumulate deletions in regions containing G4-DNA, and the recombinant FANCJ A349P mutant protein fails to unwind G4-DNA substrates [42,79].”
Structure, function and evolution of the XPD family of iron–sulfur-containing 5′→3′ DNA helicases
White, M. F. (2009) · Biochemical Society Transactions · doi:10.1042/bst0370547 · Cited by 104 · see citing works
Multistep mechanism of G-quadruplex resolution during DNA replication
Sato, K., Martin-Pintado, N., Post, H., Altelaar, M., & Knipscheer, P. (2021) · Science Advances · doi:10.1126/sciadv.abf8653 · Cited by 80 · see citing works
Wu, Y., Sommers, J. A., Suhasini, A. N., Leonard, T., Deakyne, J. S., Mazin, A. V., Shin-ya, K., Kitao, H., & Brosh, R. M. (2010) · Blood · doi:10.1182/blood-2009-11-256016 · Cited by 72 · see citing works
G4-Interacting DNA Helicases and Polymerases: Potential Therapeutic Targets
Estep, K. N., Butler, T. J., Ding, J., & Brosh, R. M. (2019) · Current Medicinal Chemistry · doi:10.2174/0929867324666171116123345 · Cited by 58 · see citing works
- Authors
- London, T. B. C., Barber, L. J., Mosedale, G., Kelly, G. P., Balasubramanian, S., Hickson, I. D., Boulton, S. J., & Hiom, K.
- Affiliations
- MRC Laboratory of Molecular Biology (GB)
- Cancer Research UK (GB)
- John Radcliffe Hospital (GB)
- University of Cambridge (GB)
- Corresponding author
- Hiom, Kevin
- ORCID
- Venue
- Journal of Biological Chemistry
- Publisher
- Elsevier BV
- Published
- 2008-12
- Volume
- 283
- Issue
- 52
- Pages
- 36132-36139
- ISSN
- 0021-9258 (ISSN-L)
- PMC
- PMC2662291
- OpenAlex
- W2067133520
- Cited by
- 252
- References
- 28
- Citations by year
- 2026: 12 · 2025: 10 · 2024: 14 · 2023: 14 · 2022: 7 · 2021: 18 · 2020: 16 · 2019: 12 · 2018: 10 · 2017: 13 · 2016: 18 · 2015: 14 · 2014: 21 · 2013: 13 · 2012: 13
- FWCI
- 6.44
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Journal of Biological Chemistry (publishedVersion, cc-by)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Discovery Research Portal (University of Dundee) (submittedVersion)
- Funders
- Cancer Research UK (A5709)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › DNA Repair Mechanisms
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › DNA and Nucleic Acid Chemistry
- Health Sciences › Medicine › Pathology and Forensic Medicine › Genetic factors in colorectal cancer
- Keywords
- FANCJ, Fanconi anemia, DNA helicase, genomic instability, genomic deletions, interstrand cross-links, DNA replication
- MeSH terms
- Binding, Competitive, Cell Line, Cross-Linking Reagents, DNA Replication, DNA Helicases, Humans, Nucleic Acid Conformation, Nucleic Acid Hybridization, Genome, Gene Deletion, Genetic Predisposition to Disease, Cell Line, Tumor, Basic-Leucine Zipper Transcription Factors, Fanconi Anemia Complementation Group Proteins, RecQ Helicases, G-Quadruplexes
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