Cited by 440

The DOI matches its Crossref record; 2 of the 2 references it cites were found in a registry or an index.

The Mitochondrial Inner Membrane Protein Mitofilin Controls Cristae Morphology

John, George B., Shang, Yonglei, Li, Li, Renken, Christian, Mannella, Carmen A., Selker, Jeanne M.L., Rangell, Linda, Bennett, Michael J., Zha, Jiping·2005·Molecular Biology of the Cell

Abstract

Mitochondria are complex organelles with a highly dynamic distribution and internal organization. Here, we demonstrate that mitofilin, a previously identified mitochondrial protein of unknown function, controls mitochondrial cristae morphology. Mitofilin is enriched in the narrow space between the inner boundary and the outer membranes, where it forms a homotypic interaction and assembles into a large multimeric protein complex. Down-regulation of mitofilin in HeLa cells by using specific small interfering RNA lead to decreased cellular proliferation and increased apoptosis, suggesting abnormal mitochondrial function. Although gross mitochondrial fission and fusion seemed normal, ultrastructural studies revealed disorganized mitochondrial inner membrane. Inner membranes failed to form tubular or vesicular cristae and showed as closely packed stacks of membrane sheets that fused intermittently, resulting in a complex maze of membranous network. Electron microscopic tomography estimated a substantial increase in inner:outer membrane ratio, whereas no cristae junctions were detected. In addition, mitochondria subsequently exhibited increased reactive oxygen species production and membrane potential. Although metabolic flux increased due to mitofilin deficiency, mitochondrial oxidative phosphorylation was not increased accordingly. We propose that mitofilin is a critical organizer of the mitochondrial cristae morphology and thus indispensable for normal mitochondrial function.

Overview

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1091/mbc.e04-08-0697

Cites

2 of 2 references verified0 citation errors · 0 not checkable

Statistics

Verification

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Citations

Cites

Research works printed but not linked: 46

  1. Alexander, C. et al . (2000). OPA1, encoding a dynamin-related GTPase, is mutated in autosomal dominant optic atrophy linked to chromosome 3q28. Nat. Genet. 26 , 211-215. · DOI · Paper page
  2. Boyle, G. M., Roucou, X., Nagley, P., Devenish, R. J., and Prescott, M. (1999). Identification of subunit g of yeast mitochondrial F1F0-ATP synthase, a protein required for maximal activity of cytochrome c oxidase. Eur. J. Biochem. 262 , 315-323. · DOI
  3. Buchanan, S. K., and Walker, J. E. (1996). Large-scale chromatographic purification of F1F0-ATPase and complex I from bovine heart mitochondria. Biochem. J. 318 , 343-349. · DOI
  4. Cohen, C., and Parry, D. A. (1990). Alpha-helical coiled coils and bundles: how to design an alpha-helical protein. Proteins 7 , 1-15. · DOI
  5. Collinson, I. R., Runswick, M. J., Buchanan, S. K., Fearnley, I. M., Skehel, J. M., van Raaij, M. J., Griffiths, D. E., and Walker, J. E. (1994). Fo membrane domain of ATP synthase from bovine heart mitochondria: purification, subunit composition, and reconstitution with F1-ATPase. Biochemistry 33 , 7971-7978. · DOI
  6. Delettre, C. et al . (2000). Nuclear gene OPA1, encoding a mitochondrial dynamin-related protein, is mutated in dominant optic atrophy. Nat. Genet. 26 , 207-210. · DOI · Paper page
  7. Donzeau, M., Kaldi, K., Adam, A., Paschen, S., Wanner, G., Guiard, B., Bauer, M. F., Neupert, W., and Brunner, M. (2000). Tim23 links the inner and outer mitochondrial membranes. Cell 101 , 401-412. · DOI
  8. Elbashir, S. M., Harborth, J., Lendeckel, W., Yalcin, A., Weber, K., and Tuschl, T. (2001). Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells. Nature 411 , 494-498. · DOI · Paper page
  9. Fadok, V. A., Voelker, D. R., Campbell, P. A., Cohen, J. J., Bratton, D. L., and Henson, P. M. (1992). Exposure of phosphatidylserine on the surface of apoptotic lymphocytes triggers specific recognition and removal by macrophages. J. Immunol. 148 , 2207-2216. · DOI
  10. Fields, S., and Song, O. (1989). A novel genetic system to detect protein-protein interactions. Nature 340 , 245-246. · DOI
  11. Frangakis, A. S., and Hegerl, R. (2001). Noise reduction in electron tomographic reconstructions using nonlinear anisotropic diffusion. J. Struct. Biol. 135 , 239-250. · DOI
  12. Frank, J., Radermacher, M., Penczek, P., Zhu, J., Li, Y., Ladjadj, M., and Leith, A. (1996). SPIDER and WEB: processing and visualization of images in 3D electron microscopy and related fields. J. Struct. Biol. 116 , 190-199. · DOI
  13. Gieffers, C., Korioth, F., Heimann, P., Ungermann, C., and Frey, J. (1997). Mitofilin is a transmembrane protein of the inner mitochondrial membrane expressed as two isoforms. Exp. Cell Res. 232 , 395-399. · DOI
  14. Goldstein, J. C., Waterhouse, N. J., Juin, P., Evan, G. I., and Green, D. R. (2000). The coordinate release of cytochrome c during apoptosis is rapid, complete and kinetically invariant. Nat. Cell Biol. 2 , 156-162. · DOI
  15. Griparic, L., and van der Bliek, A. M. (2001). The many shapes of mitochondrial membranes. Traffic 2 , 235-244. · DOI
  16. Hackenbrock, C. R. (1966). Ultrastructural bases for metabolically linked mechanical activity in mitochondria. I. Reversible ultrastructural changes with change in metabolic steady state in isolated liver mitochondria. J. Cell Biol. 30 , 269-297. · DOI
  17. Hales, K. G., and Fuller, M. T. (1997). Developmentally regulated mitochondrial fusion mediated by a conserved, novel, predicted GTPase. Cell 90 , 121-129. · DOI · Paper page
  18. Hartl, F. U., Pfanner, N., Nicholson, D. W., and Neupert, W. (1989). Mitochondrial protein import. Biochim. Biophys. Acta 988 , 1-45. · DOI
  19. Hermann, G. J., Thatcher, J. W., Mills, J. P., Hales, K. G., Fuller, M. T., Nunnari, J., and Shaw, J. M. (1998). Mitochondrial fusion in yeast requires the transmembrane GTPase Fzo1p. J. Cell Biol. 143 , 359-373. · DOI
  20. Hobbs, A. E., Srinivasan, M., McCaffery, J. M., and Jensen, R. E. (2001). Mmm1p, a mitochondrial outer membrane protein, is connected to mitochondrial DNA (mtDNA) nucleoids and required for mtDNA stability. J. Cell Biol. 152 , 401-410. · DOI
  21. Hofhaus, G., Shakeley, R. M., and Attardi, G. (1996). Use of polarography to detect respiration defects in cell cultures. Methods Enzymol. 264 , 476-483. · DOI
  22. Icho, T., Ikeda, T., Matsumoto, Y., Hanaoka, F., Kaji, K., and Tsuchida, N. (1994). A novel human gene that is preferentially transcribed in heart muscle. Gene 144 , 301-306. · DOI
  23. James, P., Halladay, J., and Craig, E. A. (1996). Genomic libraries and a host strain designed for highly efficient two-hybrid selection in yeast. Genetics 144 , 1425-1436. · DOI
  24. Jensen, R. E., Hobbs, A. E., Cerveny, K. L., and Sesaki, H. (2000). Yeast mitochondrial dynamics: fusion, division, segregation, and shape. Microsc. Res. Tech. 51 , 573-583. · DOI
  25. Krishan, A. (1975). Rapid flow cytofluorometric analysis of mammalian cell cycle by propidium iodide staining. J. Cell Biol. 66 , 188-193. · DOI
  26. Labrousse, A. M., Zappaterra, M. D., Rube, D. A., and van der Bliek, A. M. (1999). C. elegans dynamin-related protein DRP-1 controls severing of the mitochondrial outer membrane. Mol. Cell . 4 , 815-826. · DOI · Paper page
  27. Manning, N. J., Olpin, S. E., Pollitt, R. J., and Webley, J. (1990). A comparison of [9,10–3H]palmitic and [9,10–3H]myristic acids for the detection of defects of fatty acid oxidation in intact cultured fibroblasts. J. Inherit. Metab. Dis. 13 , 58-68. · DOI
  28. McBride, H. M., Silvius, J. R., and Shore, G. C. (1995). Insertion of an uncharged polypeptide into the mitochondrial inner membrane does not require a trans-bilayer electrochemical potential: effects of positive charges. Biochim. Biophys. Acta 1237 , 162-168. · DOI
  29. Messerschmitt, M., Jakobs, S., Vogel, F., Fritz, S., Dimmer, K. S., Neupert, W., and Westermann, B. (2003). The inner membrane protein Mdm33 controls mitochondrial morphology in yeast. J. Cell Biol. 160 , 553-564. · DOI
  30. Odgren, P. R., Toukatly, G., Bangs, P. L., Gilmore, R., and Fey, E. G. (1996). Molecular characterization of mitofilin (HMP), a mitochondria-associated protein with predicted coiled coil and intermembrane space targeting domains. J. Cell Sci. 109 , 2253-2264. · DOI
  31. Omori, A., Ichinose, S., Kitajima, S., Shimotohno, K. W., Murashima, Y. L., Shimotohno, K., and Seto-Ohshima, A. (2002). Gerbils of a seizure-sensitive strain have a mitochondrial inner membrane protein with different isoelectric points from those of a seizure-resistant strain. Electrophoresis 23 , 4167-4174. · DOI
  32. Otsuga, D., Keegan, B. R., Brisch, E., Thatcher, J. W., Hermann, G. J., Bleazard, W., and Shaw, J. M. (1998). The dynamin-related GTPase, Dnm1p, controls mitochondrial morphology in yeast. J. Cell Biol. 143 , 333-349. · DOI
  33. Paumard, P., Vaillier, J., Coulary, B., Schaeffer, J., Soubannier, V., Mueller, D. M., Brethes, D., di Rago, J. P., and Velours, J. (2002). The ATP synthase is involved in generating mitochondrial cristae morphology. EMBO J. 21 , 221-230. · DOI
  34. Pfanner, N., Muller, H. K., Harmey, M. A., and Neupert, W. (1987). Mitochondrial protein import: involvement of the mature part of a cleavable precursor protein in the binding to receptor sites. EMBO J. 6 , 3449-3454. · DOI
  35. Saxton, W. O., Baumeister, W., and Hahn, M. (1984). Three-dimensional reconstruction of imperfect two-dimensional crystals. Ultramicroscopy 13 , 57-70. · DOI
  36. Schagger, H., and von Jagow, G. (1991). Blue native electrophoresis for isolation of membrane protein complexes in enzymatically active form. Anal. Biochem. 199 , 223-231. · DOI
  37. Scorrano, L., Ashiya, M., Buttle, K., Weiler, S., Oakes, S. A., Mannella, C. A., and Korsmeyer, S. J. (2002). A distinct pathway remodels mitochondrial cristae and mobilizes cytochrome c during apoptosis. Dev. Cell 2 , 55-67. · DOI · Paper page
  38. Sesaki, H., and Jensen, R. E. (1999). Division versus fusion: Dnm1p and Fzo1p antagonistically regulate mitochondrial shape. J. Cell Biol. 147 , 699-706. · DOI
  39. 10.1091/mbc.e02-12-0788 · DOI
  40. Shaw, J. M., and Nunnari, J. (2002). Mitochondrial dynamics and division in budding yeast. Trends Cell Biol. 12 , 178-184. · DOI · Paper page
  41. 10.1091/mbc.12.8.2245 · DOI
  42. Taylor, S. W. et al . (2003). Characterization of the human heart mitochondrial proteome. Nat. Biotechnol. 21 , 281-286. · DOI
  43. Wong, E. D., Wagner, J. A., Gorsich, S. W., McCaffery, J. M., Shaw, J. M., and Nunnari, J. (2000). The dynamin-related GTPase, Mgm1p, is an intermembrane space protein required for maintenance of fusion competent mitochondria. J. Cell Biol. 151 , 341-352. · DOI
  44. Wong, E. D., Wagner, J. A., Scott, S. V., Okreglak, V., Holewinske, T. J., Cassidy-Stone, A., and Nunnari, J. (2003). The intramitochondrial dynamin-related GTPase, Mgm1p, is a component of a protein complex that mediates mitochondrial fusion. J. Cell Biol. 160 , 303-311. · DOI
  45. Yaffe, M. P. (1999). The machinery of mitochondrial inheritance and behavior. Science 283 , 1493-1497. · DOI
  46. Zamzami, N., Marchetti, P., Castedo, M., Decaudin, D., Macho, A., Hirsch, T., Susin, S. A., Petit, P. X., Mignotte, B., and Kroemer, G. (1995). Sequential reduction of mitochondrial transmembrane potential and generation of reactive oxygen species in early programmed cell death. J. Exp. Med. 182 , 367-377. · DOI · Paper page

Cited by

See all 440

Metadata

Authors
John, G. B., Shang, Y., Li, L., Renken, C., Mannella, C. A., Selker, J. M. L., Rangell, L., Bennett, M. J., & Zha, J.
Affiliations
  • Department of Pathology, University of Texas Southwestern Medical Center at Dallas, Dallas, TX 75390
  • Genentech, South San Francisco, CA 94080
  • Resource for Visualization of Biological Complexity, Wadsworth Center, Empire State Plaza, Albany, NY 12201
  • Institute of Molecular Biology, Electron Microscope Facility, University of Oregon, Eugene, OR 97403
Venue
Molecular Biology of the Cell
Published
2005-03
Volume
16
Issue
3
Pages
1543-1554
ISSN
  • 1059-1524
  • 1939-4586
Cited by
440
References
2
Language
en

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review