The DOI matches its Crossref record; 7 of the 7 references it cites were found in a registry or an index.
PMBD: a Comprehensive Plastics Microbial Biodegradation Database
Open accessAbstract
Since the invention over a hundred years ago, plastics have been used in many applications, and they are involved in every aspect of our lives. The extensive usage of plastics results in a tremendous amount of waste, which has become a severe burden on the environment. Several degradation approaches exist in nature to cope with ever-increasing plastic waste. Among these approaches, biodegradation by microorganisms has emerged as a natural way, which is favored by many environmentally conscious societies. To facilitate the study on biodegradation of plastics, we developed an online resource, Plastics Microbial Biodegradation Database (PMBD), to gather and present the information about microbial biodegradation of plastics. In this database, 949 microorganisms–plastics relationships and 79 genes involved in the biodegradation of plastics were manually collected and confirmed through literature searching. In addition, more than 8000 automatically annotated enzyme sequences, which were predicted to be involved in the plastics biodegradation, were extracted from the TrEMBL section of the UniProt database. The PMBD database is presented with a website at http://pmbd.genome-mining.cn/home. Data may be accessed through browsing or searching. Also included on the website are a sequence alignment tool and a function prediction tool.
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UniProt: a worldwide hub of protein knowledge
The UniProt Consortium (2019) · Nucleic Acids Research · doi:10.1093/nar/gky1049 · Cited by 7,698
A bacterium that degrades and assimilates poly(ethylene terephthalate)
Yoshida, S., Hiraga, K., Takehana, T., Taniguchi, I., Yamaji, H., Maeda, Y., Toyohara, K., Miyamoto, K., Kimura, Y., & Oda, K. (2016) · Science · doi:10.1126/science.aad6359 · Cited by 3,367
Plastics Recycling: Challenges and Opportunities
Hopewell, J., Dvorak, R., & Kosior, E. (2009) · Philosophical Transactions of the Royal Society B: Biological Sciences · doi:10.1098/rstb.2008.0311 · Cited by 3,201
Evidence that the Great Pacific Garbage Patch is rapidly accumulating plastic
Lebreton, L., Slat, B., Ferrari, F., Sainte-Rose, B., Aitken, J., Marthouse, R., Hajbane, S., Cunsolo, S., Schwarz, A., Levivier, A., et al. (2018) · Scientific Reports · doi:10.1038/s41598-018-22939-w · Cited by 1,839
Challenges and opportunities of biodegradable plastics: a mini review
Rujnić-Sokele, M., & Pilipović, A. (2017) · Waste Management & Research: The Journal for a Sustainable Circular Economy · doi:10.1177/0734242x16683272 · Cited by 550
Study of microbes having potentiality for biodegradation of plastics
Ghosh, S. K., Pal, S., & Ray, S. (2013) · Environmental Science and Pollution Research · doi:10.1007/s11356-013-1706-x · Cited by 305
Tailoring Hydrocarbon Polymers and All‐Hydrocarbon Composites for Circular Economy
Hees, T., Zhong, F., Stürzel, M., & Mülhaupt, R. (2019) · Macromolecular Rapid Communications · doi:10.1002/marc.201800608 · Cited by 100
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Amobonye, A., Bhagwat, P., Singh, S., & Pillai, S. (2021) · Science of The Total Environment · doi:10.1016/j.scitotenv.2020.143536 · Cited by 738
Mohanty, A. K., Wu, F., Mincheva, R., Hakkarainen, M., Raquez, J.-M., Mielewski, D. F., Narayan, R., Netravali, A. N., & Misra, M. (2022) · Nature Reviews Methods Primers · doi:10.1038/s43586-022-00124-8 · Cited by 355
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Zhai, X., Zhang, X.-H., & Yu, M. (2023) · Frontiers in Microbiology · doi:10.3389/fmicb.2023.1127308 · Cited by 281
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Cao, Z., Yan, W., Ding, M., & Yuan, Y. (2022) · Frontiers in Bioengineering and Biotechnology · doi:10.3389/fbioe.2022.1051233 · Cited by 274
Plastics degradation by hydrolytic enzymes: The plastics‐active enzymes database—PAZy
Buchholz, P. C. F., Feuerriegel, G., Zhang, H., Perez‐Garcia, P., Nover, L., Chow, J., Streit, W. R., & Pleiss, J. (2022) · Proteins: Structure, Function, and Bioinformatics · doi:10.1002/prot.26325 · Cited by 259
Self-citationEdwards, S., León-Zayas, R., Ditter, R., Laster, H., Sheehan, G., Anderson, O., Beattie, T., & Mellies, J. L. (2022) · International Journal of Molecular Sciences · doi:10.3390/ijms23105612 · Cited by 67
Metadata
- Authors
- Gan, Z., & Zhang, H.
- Venue
- Database
- Publisher
- Oxford University Press (OUP)
- Published
- 2019-01-01
- Volume
- 2019
- ISSN
- 1758-0463 (ISSN-L)
- OpenAlex
- W2986569804
- Cited by
- 166
- References
- 7
- FWCI
- 4.44
- Type
- journal article
- Language
- en
- Open access
- gold
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