ELAV inhibits 3′-end processing to promote neural splicing of ewg pre-mRNA
Open accessAbstract
The embryonic lethal abnormal visual system (ELAV) is a gene-specific regulator of alternative pre-mRNA processing in neurons of Drosophila. Here we define a functional in vivo binding site for ELAV in neurons through the development of a reporter gene system in transgenic animals in combination with in vitro binding assays. ELAV binds to erect wing (ewg) RNA 3′ of a polyadenylation site in the terminal intron 6. At this polyadenylation site, ELAV inhibits 3′-end processing in vitro in a dose-dependent and sequence-specific manner, and ELAV binding is necessary in vivo to promote splicing of ewg intron 6. Further, the AAUAAA poly(A) complex recognition sequence, together with ELAV, is required to regulate neural 3′ splice site choice in vivo. In addition, the use of segmentally labeled RNA substrates in UV cross-linking assays suggest that ELAV does not inhibit or redirect binding of cleavage factor dCstF64 at the regulated polyadenylation site on ewg RNA. These data indicate that binding of 3′-end processing factors, together with ELAV, can regulate alternative splicing.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Both the Drosophila ELAV and the mammalian Hu proteins control alternative polyadenylation specifically in neurons.
“In addition to alternative splicing, both the Drosophila ELAV and the mammalian Hu proteins were demonstrated to control alternative polyadenylation specifically in neurons (Soller and White 2003).”
From Emerging complexity of the HuD/ELAVl4 gene; implications for neuronal development, function, and dysfunction (2013) · cites this paper as Soller and White 2003
The Discussion reports that Drosophila ELAV inhibits 3′-end formation at an intronic polyadenylation site, promoting neuronal splicing of ewg. The paper does not demonstrate the same control by mammalian Hu proteins; its introductory passage instead describes their previously assigned functions as cytoplasmic RNA processing. (LLM, conf=0.89)
Experimental — accuracy not yet measured
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
Dignam, J. D., Lebovitz, R. M., & Roeder, R. G. (1983) · Nucleic Acids Research · doi:10.1093/nar/11.5.1475 · Cited by 11,262 · see citing works
A genomic view of alternative splicing
Modrek, B., & Lee, C. (2002) · Nature Genetics · doi:10.1038/ng0102-13 · Cited by 1,307 · see citing works
Integrating mRNA Processing with Transcription
Proudfoot, N. J., Furger, A., & Dye, M. J. (2002) · Cell · doi:10.1016/s0092-8674(02)00617-7 · Cited by 1,084 · see citing works
Zhao, J., Hyman, L. E., & Moore, C. L. (1999) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.63.2.405-445.1999 · Cited by 1,024 · see citing works
Jurica, M. S., & Moore, M. J. (2003) · Molecular Cell · doi:10.1016/s1097-2765(03)00270-3 · Cited by 963 · see citing works
Alternative pre-mRNA splicing: the logic of combinatorial control
Smith, C. W. J., & Valcárcel, J. (2000) · Trends in Biochemical Sciences · doi:10.1016/s0968-0004(00)01604-2 · Cited by 901 · see citing works
Alternative pre-mRNA splicing and proteome expansion in metazoans
Maniatis, T., & Tasic, B. (2002) · Nature · doi:10.1038/418236a · Cited by 768 · see citing works
RNA stabilization by the AU‐rich element binding protein, HuR, an ELAV protein
Peng, S., Chen, C. A., Xu, N., & Shyu, A. (1998) · The EMBO Journal · doi:10.1093/emboj/17.12.3461 · Cited by 739 · see citing works
Hypoxic Stabilization of Vascular Endothelial Growth Factor mRNA by the RNA-binding Protein HuR
Levy, N. S., Chung, S., Furneaux, H., & Levy, A. P. (1998) · Journal of Biological Chemistry · doi:10.1074/jbc.273.11.6417 · Cited by 663 · see citing works
ALTERNATIVE SPLICING OF PRE-mRNA: Developmental Consequences and Mechanisms of Regulation
Lopez, A. J. (1998) · Annual Review of Genetics · doi:10.1146/annurev.genet.32.1.279 · Cited by 644 · see citing works
Pre-mRNA splicing in the new millennium
Hastings, M. L., & Krainer, A. R. (2001) · Current Opinion in Cell Biology · doi:10.1016/s0955-0674(00)00212-x · Cited by 486 · see citing works
Nova-1 Regulates Neuron-Specific Alternative Splicing and Is Essential for Neuronal Viability
Jensen, K. B., Dredge, B. K., Stefani, G., Zhong, R., Buckanovich, R. J., Okano, H. J., Yang, Y. Y. L., & Darnell, R. B. (2000) · Neuron · doi:10.1016/s0896-6273(00)80900-9 · Cited by 426 · see citing works
Takagaki, Y., Seipelt-Thiemann, R. L., Peterson, M. L., & Manley, J. L. (1996) · Cell · doi:10.1016/s0092-8674(00)82000-0 · Cited by 425 · see citing works
Levine, T., Gao, F., King, P. H., Andrews, L. G., & Keene, J. D. (1993) · Molecular and Cellular Biology · doi:10.1128/mcb.13.6.3494 · Cited by 356 · see citing works
Stowers, R. S., & Schwarz, T. L. (1999) · Genetics · doi:10.1093/genetics/152.4.1631 · Cited by 340 · see citing works
Alternative RNA splicing in the nervous system
Grabowski, P. J., & Black, D. L. (2001) · Progress in Neurobiology · doi:10.1016/s0301-0082(01)00007-7 · Cited by 331 · see citing works
ELAV/Hu proteins inhibit p27 translation via an IRES element in the p27 5′UTR
Kullmann, M., Göpfert, U., Siewe, B., & Hengst, L. (2002) · Genes & Development · doi:10.1101/gad.248902 · Cited by 327 · see citing works
Identification of HuR as a protein implicated in AUUUA‐mediated mRNA decay
Myer, V. E., Fan, X. C., & Steitz, J. A. (1997) · The EMBO Journal · doi:10.1093/emboj/16.8.2130 · Cited by 302 · see citing works
The elav Gene Product of Drosophila , Required in Neurons, Has Three RNP Consensus Motifs
Robinow, S., Campos, A. R., Yao, K., & White, K. (1988) · Science · doi:10.1126/science.3144044 · Cited by 300 · see citing works
Self-citationDelineation of mRNA Export Pathways by the Use of Cell-Permeable Peptides
Gallouzi, I., & STEITZ, J. A. (2001) · Science · doi:10.1126/science.1064693 · Cited by 266 · see citing works
Post‐transcriptional regulation contributes to Drosophila clock gene mRNA cycling
So, W. V., & Rosbash, M. (1997) · The EMBO Journal · doi:10.1093/emboj/16.23.7146 · Cited by 258 · see citing works
Ford, L. P., Watson, J., Keene, J. D., & Wilusz, J. (1999) · Genes & Development · doi:10.1101/gad.13.2.188 · Cited by 243 · see citing works
MacDonald, C. C., Wilusz, J., & Shenk, T. E. (1994) · Molecular and Cellular Biology · doi:10.1128/mcb.14.10.6647 · Cited by 234 · see citing works
Takagaki, Y., & Manley, J. L. (1998) · Molecular Cell · doi:10.1016/s1097-2765(00)80291-9 · Cited by 223 · see citing works
Niwa, M., & Berget, S. M. (1991) · Genes & Development · doi:10.1101/gad.5.11.2086 · Cited by 205 · see citing works
Antic, D., Lu, N., & Keene, J. D. (1999) · Genes & Development · doi:10.1101/gad.13.4.449 · Cited by 202 · see citing works
Keller, W., Bienroth, S., Lang, K. M., & Christofori, G. (1991) · The EMBO Journal · doi:10.1002/j.1460-2075.1991.tb05002.x · Cited by 202 · see citing works
Koushika, S. P., Lisbin, M. J., & White, K. (1996) · Current Biology · doi:10.1016/s0960-9822(02)70787-2 · Cited by 181 · see citing works
Self-citationYao, K., Samson, M., Reeves, R. K., & White, K. (1993) · Journal of Neurobiology · doi:10.1002/neu.480240604 · Cited by 165 · see citing works
Self-citationThe splice of life: Alternative splicing and neurological disease
Dredge, B. K., Polydorides, A. D., & Darnell, R. B. (2001) · Nature reviews. Neuroscience · doi:10.1038/35049061 · Cited by 164 · see citing works
Lallena, M. J., Chalmers, K. J., Llamazares, S., Lamond, A. I., & Valcárcel, J. (2002) · Cell · doi:10.1016/s0092-8674(02)00730-4 · Cited by 161 · see citing works
[7] Joining of RNAs by splinted ligation
Moore, M. J., & Query, C. C. (2000) · Methods in enzymology on CD-ROM/Methods in enzymology · doi:10.1016/s0076-6879(00)17009-0 · Cited by 157 · see citing works
Gao, F., Carson, C. C., Levine, T., & Keene, J. D. (1994) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.91.23.11207 · Cited by 156 · see citing works
An intron enhancer recognized by splicing factors activates polyadenylation.
Lou, H., Gagel, R. F., & Berget, S. M. (1996) · Genes & Development · doi:10.1101/gad.10.2.208 · Cited by 152 · see citing works
Lou, H. J., Helfman, D. M., Gagel, R. F., & Berget, S. M. (1999) · Molecular and Cellular Biology · doi:10.1128/mcb.19.1.78 · Cited by 149 · see citing works
Veraldi, K. L., Arhin, G. K., Martincic, K., Chung-Ganster, L.-H., Wilusz, J., & Milcarek, C. (2001) · Molecular and Cellular Biology · doi:10.1128/mcb.21.4.1228-1238.2001 · Cited by 143 · see citing works
Crenshaw, E. B., Russo, A. F., Swanson, L. W., & Rosenfeld, M. G. (1987) · Cell · doi:10.1016/0092-8674(87)90291-1 · Cited by 118 · see citing works
Gilmartin, G. M., & Nevins, J. R. (1991) · Molecular and Cellular Biology · doi:10.1128/mcb.11.5.2432 · Cited by 112 · see citing works
Control ofDrosophila Sex-lethalpre-mRNA splicing by its own female-specific product
Sakamoto, H., Inoue, K., Higuchi, I., Ono, Y., & Shimura, Y. (1992) · Nucleic Acids Research · doi:10.1093/nar/20.21.5533 · Cited by 102 · see citing works
Abe, R., Sakashita, E., Yamamoto, K. I., & Sakamoto, H. (1996) · Nucleic Acids Research · doi:10.1093/nar/24.24.4895 · Cited by 99 · see citing works
Lisbin, M. J., Qiu, J., & White, K. (2001) · Genes & Development · doi:10.1101/gad.903101 · Cited by 97 · see citing works
Self-citationEdwalds-Gilbert, G., & Milcarek, C. (1995) · Molecular and Cellular Biology · doi:10.1128/mcb.15.11.6420 · Cited by 95 · see citing works
Wilusz, J., Shenk, T. E., Takagaki, Y., & Manley, J. L. (1990) · Molecular and Cellular Biology · doi:10.1128/mcb.10.3.1244 · Cited by 85 · see citing works
Wang, J., & Bell, L. R. (1994) · Genes & Development · doi:10.1101/gad.8.17.2072 · Cited by 80 · see citing works
Complex formation of the neuron-specific ELAV-like Hu RNA-binding proteins
Kasashima, K. (2002) · Nucleic Acids Research · doi:10.1093/nar/gkf567 · Cited by 74 · see citing works
Labourier, E., Adams, M. D., & Rio, D. C. (2001) · Molecular Cell · doi:10.1016/s1097-2765(01)00311-2 · Cited by 74 · see citing works
Koushika, S. P., Soller, M., & White, K. (2000) · Molecular and Cellular Biology · doi:10.1128/mcb.20.5.1836-1845.2000 · Cited by 73 · see citing works
Self-citationRegulated splicing of the Drosophila sex-lethal male exon involves a blockage mechanism.
Horabin, J. I., & Schedl, P. D. (1993) · Molecular and Cellular Biology · doi:10.1128/mcb.13.3.1408 · Cited by 60 · see citing works
DeSimone, S. M., Coelho, C. M. A., Roy, S., VijayRaghavan, K., & White, K. (1996) · Development · doi:10.1242/dev.122.1.31 · Cited by 53 · see citing works
Self-citationSamson, M.-L. (1998) · Genetics · doi:10.1093/genetics/150.2.723 · Cited by 51 · see citing works
Lisbin, M. J., Gordon, M., Yannoni, Y. M., & White, K. (2000) · Genetics · doi:10.1093/genetics/155.4.1789 · Cited by 39 · see citing works
Self-citationKoushika, S. P., Soller, M., DeSimone, S. M., Daub, D. M., & White, K. (1999) · Molecular and Cellular Biology · doi:10.1128/mcb.19.6.3998 · Cited by 36 · see citing works
Self-citationRNA Processing and Expression of Immunoglobulin Genes
Peterson, M. L. (1994) · Elsevier eBooks · doi:10.1016/b978-0-12-653955-4.50016-6 · Cited by 23 · see citing works
Spikes, D., & Bingham, P. M. (1992) · Nucleic Acids Research · doi:10.1093/nar/20.21.5719 · Cited by 16 · see citing works
Regulated Splicing of the Drosophila Sex-lethal Male Exon Involves a Blockage Mechanism
Horabin, J. I., & Schedl, P. D. (1993) · Molecular and Cellular Biology · doi:10.1128/mcb.13.3.1408-1414.1993 · Cited by 14 · see citing works
Flagged first, then by citations
Research works printed but not linked: 2
- Sambrook, R.P. and Russel, D.V. 2001. Molecular cloning-A laboratory handbook. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
- Wahle, E. and Keller, W. 1994. 3Ј-end processing of mRNA. In RNA processing: A practical approach (eds. S.J. Higgins and B.D. Hames), pp. 1-34. Oxford University Press, Oxford, UK.
Cited by
Sorted by citations
Function of alternative splicing
Stamm, S., Ben‐Ari, S., Rafalska, I., Tang, Y., Zhang, Z., Toiber, D., Thanaraj, T. A., & Soreq, H. (2004) · Gene · doi:10.1016/j.gene.2004.10.022 · Cited by 1,373 · see citing works
m6A potentiates Sxl alternative pre-mRNA splicing for robust Drosophila sex determination
Haussmann, I. U., Bódi, Z., Sánchez‐Morán, E., Mongan, N. P., Archer, N., Fray, R. G., & Soller, M. (2016) · Nature · doi:10.1038/nature20577 · Cited by 601 · see citing works
Self-citationMolecular mechanisms of eukaryotic pre-mRNA 3′ end processing regulation
Millevoi, S., & Vagner, S. (2009) · Nucleic Acids Research · doi:10.1093/nar/gkp1176 · Cited by 393 · see citing works
Neuronal regulation of alternative pre-mRNA splicing
Li, Q., Lee, J.-A., & Black, D. L. (2007) · Nature Reviews Neuroscience · doi:10.1038/nrn2237 · Cited by 376 · see citing works
Splicing Regulation in Neurologic Disease
Licatalosi, D. D., & Darnell, R. B. (2006) · Neuron · doi:10.1016/j.neuron.2006.09.017 · Cited by 250 · see citing works
Global Patterns of Tissue-Specific Alternative Polyadenylation in Drosophila
Smibert, P., Miura, P., Westholm, J. O., Shenker, S., May, G. E., Duff, M. O., Zhang, D., Eads, B. D., Carlson, J., Brown, J. B., et al. (2012) · Cell Reports · doi:10.1016/j.celrep.2012.01.001 · Cited by 226 · see citing works
Ince-Dunn, G., Okano, H. J., Jensen, K. B., Park, W.-Y., Zhong, R., Ule, J., Mele, A., Fak, J. J., Yang, C., Zhang, C., et al. (2012) · Neuron · doi:10.1016/j.neuron.2012.07.009 · Cited by 212 · see citing works
Muscleblind-like 1 interacts with RNA hairpins in splicing target and pathogenic RNAs
Yuan, Y., Compton, S. A., Sobczak, K., Stenberg, M. G., Thornton, C. A., Griffith, J. D., & Swanson, M. S. (2007) · Nucleic Acids Research · doi:10.1093/nar/gkm601 · Cited by 210 · see citing works
RNA Protein Interaction in Neurons
Darnell, R. B. (2013) · Annual Review of Neuroscience · doi:10.1146/annurev-neuro-062912-114322 · Cited by 181 · see citing works
Defining a neuron: neuronal ELAV proteins
Pascale, A., Amadio, M., & Quattrone, A. (2008) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-007-7017-y · Cited by 158 · see citing works
Berger, C., Renner, S., Lüer, K., & Technau, G. M. (2007) · Developmental Dynamics · doi:10.1002/dvdy.21372 · Cited by 153 · see citing works
Dai, W., Zhang, G., & Makeyev, E. V. (2011) · Nucleic Acids Research · doi:10.1093/nar/gkr783 · Cited by 148 · see citing works
Hu Proteins Regulate Polyadenylation by Blocking Sites Containing U-rich Sequences
Zhu, H., Zhou, H.-L., Hasman, R. A., & Lou, H. J. (2006) · Journal of Biological Chemistry · doi:10.1074/jbc.m609349200 · Cited by 131 · see citing works
Bronicki, L. M., & Jasmin, B. J. (2013) · RNA · doi:10.1261/rna.039164.113 · Cited by 126 · see citing works
A Nuclear Function of Hu Proteins as Neuron-specific Alternative RNA Processing Regulators
Zhu, H., Hasman, R. A., Barron, V. A., Luo, G., & Lou, H. (2006) · Molecular Biology of the Cell · doi:10.1091/mbc.e06-02-0099 · Cited by 114 · see citing works
A functional genomic screen in planarians identifies novel regulators of germ cell developmentPreprint
Wang, Y., Stary, J. M., Wilhelm, J. E., & Newmark, P. A. (2010) · Genes & Development · doi:10.1101/gad.1951010 · Cited by 105 · see citing works
ELAV mediates 3′ UTR extension in the Drosophila nervous systemPreprint
Hilgers, V., Lemke, S. B., & Levine, M. (2012) · Genes & Development · doi:10.1101/gad.199653.112 · Cited by 101 · see citing works
The molecular elements that underlie developmental evolution
Alonso, C. R., & Wilkins, A. S. (2005) · Nature Reviews Genetics · doi:10.1038/nrg1676 · Cited by 97 · see citing works
Suzuki, M. G., Imanishi, S., Dohmae, N., Asanuma, M., & Matsumoto, S. (2010) · Molecular and Cellular Biology · doi:10.1128/mcb.00444-10 · Cited by 95 · see citing works
ELAV Links Paused Pol II to Alternative Polyadenylation in the Drosophila Nervous System
Oktaba, K., Zhang, W., Lotz, T. S., Jun, D. J., Lemke, S. B., Ng, S., Esposito, E., Levine, M., & Hilgers, V. (2014) · Molecular Cell · doi:10.1016/j.molcel.2014.11.024 · Cited by 92 · see citing works
Pre-messenger RNA processing and its regulation: a genomic perspective
Soller, M. (2006) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-005-5391-x · Cited by 88 · see citing works
Self-citationPascale, A., & Govoni, S. M. (2011) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-011-0810-7 · Cited by 88 · see citing works
Emerging Roles for 3′ UTRs in Neurons
Bae, B., & Miura, P. (2020) · International Journal of Molecular Sciences · doi:10.3390/ijms21103413 · Cited by 74 · see citing works
Zaharieva, E. E., Haussmann, I. U., Bräuer, U., & Soller, M. (2015) · Molecular and Cellular Biology · doi:10.1128/mcb.00473-15 · Cited by 72 · see citing works
Self-citationELAV Multimerizes on Conserved AU 4-6 Motifs Important for ewg Splicing Regulation
Soller, M., & White, K. (2005) · Molecular and Cellular Biology · doi:10.1128/mcb.25.17.7580-7591.2005 · Cited by 67 · see citing works
Self-citationSoller, M., Haussmann, I. U., Hollmann, M., Choffat, Y., White, K., Kubli, E., & Schäfer, M. (2006) · Current Biology · doi:10.1016/j.cub.2006.07.055 · Cited by 64 · see citing works
Self-citationRNA-Binding Proteins in Regulation of Alternative Cleavage and Polyadenylation
Zheng, D., & Tian, B. (2014) · Advances in experimental medicine and biology · doi:10.1007/978-1-4939-1221-6_3 · Cited by 68 · see citing works
Spletter, M. L., Barz, C., Yeroslaviz, A., Schönbauer, C., Ferreira, I. R. S., Sarov, M., Gerlach, D., Stark, A., Habermann, B. H., & Schnorrer, F. (2014) · EMBO Reports · doi:10.15252/embr.201439791 · Cited by 64 · see citing works
Erect wing regulates synaptic growth in Drosophilaby integration of multiple signaling pathways
Haussmann, I. U., White, K., & Soller, M. (2008) · Genome biology · doi:10.1186/gb-2008-9-4-r73 · Cited by 63 · see citing works
Self-citationThe third RNA recognition motif of Drosophila ELAV protein has a role in multimerization
Toba, G., & White, K. (2008) · Nucleic Acids Research · doi:10.1093/nar/gkm1168 · Cited by 64 · see citing works
Self-citationRivera, L. R., Thacker, M., Pontell, L. J., Cho, H., & Furness, J. B. (2011) · Cell and Tissue Research · doi:10.1007/s00441-010-1126-x · Cited by 60 · see citing works
Winter, J., Roepcke, S., Krause, S., Müller, E., Otto, A., Vingron, M., & Schweiger, S. (2008) · PLoS ONE · doi:10.1371/journal.pone.0002780 · Cited by 56 · see citing works
Lü, W., Lee, S., Majumdar, S., Zhang, B., Sanfilippo, P., Joseph, B. J., Miura, P., Soller, M., & Lai, E. C. (2020) · Molecular Cell · doi:10.1016/j.molcel.2020.09.007 · Cited by 46 · see citing works
Self-citationELAV/Hu RNA binding proteins determine multiple programs of neural alternative splicing
Lee, S., Wei, L., Zhang, B., Goering, R., Majumdar, S., Wen, J., Taliaferro, J. M., & Lai, E. C. (2021) · PLoS Genetics · doi:10.1371/journal.pgen.1009439 · Cited by 44 · see citing works
Alternative splicing interference by xenobiotics
Zaharieva, E. E., Chipman, J. K., & Soller, M. (2012) · Toxicology · doi:10.1016/j.tox.2012.01.014 · Cited by 43 · see citing works
Self-citationZhang, Z., So, K., Peterson, R., Bauer, M. J., Ng, H., Zhang, Y., Kim, J. H., Kidd, T., & Miura, P. (2019) · Cell Reports · doi:10.1016/j.celrep.2019.05.083 · Cited by 42 · see citing works
Soller, M., & White, K. (2004) · Current Biology · doi:10.1016/j.cub.2003.12.041 · Cited by 42 · see citing works
Self-citationThe ELAV family of RNA-binding proteins in synaptic plasticity and long-term memory
Mirisis, A. A., & Carew, T. J. (2019) · Neurobiology of Learning and Memory · doi:10.1016/j.nlm.2019.04.007 · Cited by 38 · see citing works
Samson, M. (2008) · BMC Genomics · doi:10.1186/1471-2164-9-392 · Cited by 38 · see citing works
ELAV and FNE Determine Neuronal Transcript Signatures through EXon-Activated Rescue
Carrasco, J., Rauer, M., Hummel, B., Grzejda, D., Alfonso-Gonzalez, C., Lee, Y. J., Wang, Q., Puchalska, M., Mittler, G., & Hilgers, V. (2020) · Molecular Cell · doi:10.1016/j.molcel.2020.09.011 · Cited by 37 · see citing works
Conditional gene expression and RNAi using MEC-8–dependent splicing in C. elegans
Calixto, A., Ma, C., & Chalfie, M. (2010) · Nature Methods · doi:10.1038/nmeth.1445 · Cited by 37 · see citing works
Shared RNA-binding sites for interacting members of the Drosophila ELAV family of neuronal proteins
Borgeson, C. D. (2005) · Nucleic Acids Research · doi:10.1093/nar/gki942 · Cited by 36 · see citing works
Haussmann, I. U., Li, M., & Soller, M. (2011) · Genetics · doi:10.1534/genetics.111.131383 · Cited by 35 · see citing works
Self-citationYano, M., Hayakawa‐Yano, Y., & Okano, H. (2016) · International Journal of Developmental Neuroscience · doi:10.1016/j.ijdevneu.2016.01.002 · Cited by 33 · see citing works
Haussmann, I. U., Wu, Y., Nallasivan, M. P., Archer, N., Bódi, Z., Hebenstreit, D., Waddell, S., Fray, R. G., & Soller, M. (2022) · Nature Communications · doi:10.1038/s41467-022-28549-5 · Cited by 33 · see citing works
Self-citationThe egghead gene is required for compartmentalization in Drosophila optic lobe development
Fan, Y., Soller, M., Flister, S., Hollmann, M., Müller, M., Bello, B. C., Egger, B., White, K., Schäfer, M., & Reichert, H. (2005) · Developmental Biology · doi:10.1016/j.ydbio.2005.08.031 · Cited by 33 · see citing works
Self-citationRogulja-Ortmann, A., Picão-Osório, J., Villava, C. E., Patraquim, P., Lafuente, E., Aspden, J. L., Thomsen, S., Technau, G. M., & Alonso, C. R. (2014) · Development · doi:10.1242/dev.101519 · Cited by 30 · see citing works
Moschall, R., Gaik, M., & Medenbach, J. (2017) · FEBS Letters · doi:10.1002/1873-3468.12652 · Cited by 28 · see citing works
Diverse cell-specific patterns of alternative polyadenylation in Drosophila
Lee, S., Chen, Y., Gillen, A. E., Taliaferro, J. M., Deplancke, B., Li, H., & Lai, E. C. (2022) · Nature Communications · doi:10.1038/s41467-022-32305-0 · Cited by 28 · see citing works
Haussmann, I. U., Ustaoğlu, P., Bräuer, U., Hemani, Y., Dix, T. C., & Soller, M. (2018) · Nucleic Acids Research · doi:10.1093/nar/gky1254 · Cited by 29 · see citing works
Self-citationFragkouli, A., Koukouraki, P., Vlachos, I. S., Paraskevopoulou, M. D., Hatzigeorgiou, A. G., & Doxakis, E. (2017) · Scientific Reports · doi:10.1038/srep44507 · Cited by 27 · see citing works
Simionato, E., Barrios, N., Duloquin, L., Boissonneau, E., Lecorre, P., & Agnès, F. (2006) · Developmental Biology · doi:10.1016/j.ydbio.2006.09.028 · Cited by 27 · see citing works
Dynamically expressed single ELAV/Hu orthologue elavl2 of bees is required for learning and memory
Ustaoğlu, P., Gill, J. K., Doubovetzky, N., Haussmann, I. U., Dix, T. C., Arnold, R. R., Devaud, J., & Soller, M. (2021) · Communications Biology · doi:10.1038/s42003-021-02763-1 · Cited by 24 · see citing works
Self-citationRegulation of the Alternative Neural Transcriptome by ELAV/Hu RNA Binding Proteins
Lü, W., & Lai, E. C. (2022) · Frontiers in Genetics · doi:10.3389/fgene.2022.848626 · Cited by 23 · see citing works
Regulation of neuronal RNA signatures by ELAV /Hu proteins
Hilgers, V. (2022) · Wiley Interdisciplinary Reviews - RNA · doi:10.1002/wrna.1733 · Cited by 24 · see citing works
Alternative splicing in Drosophila neuronal development
Mohr, C., & Hartmann, B. (2014) · Journal of Neurogenetics · doi:10.3109/01677063.2014.936437 · Cited by 23 · see citing works
The Drosophila Wilms׳ Tumor 1-Associating Protein (WTAP) homolog is required for eye development
Anderson, A. M., Weasner, B. P., Weasner, B. M., & Kumar, J. P. (2014) · Developmental Biology · doi:10.1016/j.ydbio.2014.03.012 · Cited by 21 · see citing works
Regulation of alternative splicing and polyadenylation in neurons
Lee, S., Aubee, J. I., & Lai, E. C. (2023) · Life Science Alliance · doi:10.26508/lsa.202302000 · Cited by 21 · see citing works
Sena, R. M., Twiss, J. L., Gardiner, A. S., Dell’Orco, M., Linsenbardt, D. N., & Perrone‐Bizzozero, N. I. (2021) · Molecules · doi:10.3390/molecules26102836 · Cited by 18 · see citing works
Sanfilippo, P., Smibert, P., Duan, H., & Lai, E. C. (2016) · Development · doi:10.1242/dev.141978 · Cited by 18 · see citing works
Implications of Poly(A) Tail Processing in Repeat Expansion Diseases
Joachimiak, P., Ciesiołka, A., Figura, G., & Fiszer, A. (2022) · Cells · doi:10.3390/cells11040677 · Cited by 17 · see citing works
RNA-binding proteins and neural development: a matter of targets and complexes
Agnès, F., & Perron, M. (2004) · Neuroreport · doi:10.1097/00001756-200412030-00001 · Cited by 17 · see citing works
Wang, Y., Gracheva, E. O., Richmond, J. E., Kawano, T., Couto, J. M., Calarco, J. A., Vijayaratnam, V., Jin, Y., & Zhen, M. (2006) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0602073103 · Cited by 17 · see citing works
RNA-binding protein research with transcriptome-wide technologies in neural development
Yano, M., Ohtsuka, T., & Okano, H. (2014) · Cell and Tissue Research · doi:10.1007/s00441-014-1923-8 · Cited by 16 · see citing works
Haussmann, I. U., & Soller, M. (2010) · Developmental Biology · doi:10.1016/j.ydbio.2010.09.006 · Cited by 16 · see citing works
Self-citationMale-specific splicing of the silkworm Imp gene is maintained by an autoregulatory mechanism
Suzuki, M. G., Kobayashi, S., & Aoki, F. (2013) · Mechanisms of Development · doi:10.1016/j.mod.2013.10.004 · Cited by 16 · see citing works
Hwang, J.-S., Go, H.-J., Goo, T., Yun, E.-Y., Choi, K.-H., Seong, S., Lee, S.-M., Lee, B.-H., Kim, I., Chun, T., et al. (2005) · Archives of Insect Biochemistry and Physiology · doi:10.1002/arch.20057 · Cited by 14 · see citing works
Determinants of ELAV gene-specific regulation
Soller, M., Li, M., & Haussmann, I. U. (2010) · Biochemical Society Transactions · doi:10.1042/bst0381122 · Cited by 12 · see citing works
Self-citationRegulation of the ELAV target ewg: insights from an evolutionary perspective
Soller, M., Li, M., & Haussmann, I. U. (2008) · Biochemical Society Transactions · doi:10.1042/bst0360502 · Cited by 11 · see citing works
Self-citationAlternative cleavage and polyadenylation: key regulatory mechanisms in health and disease
Zhang, Y., Huang, Z., Lu, W., & Liu, Z. (2025) · RNA Biology · doi:10.1080/15476286.2025.2529033 · Cited by 10 · see citing works
Regulation of ELAV/Hu RNA-binding proteins by phosphorylation
Bräuer, U., Zaharieva, E. E., & Soller, M. (2014) · Biochemical Society Transactions · doi:10.1042/bst20140103 · Cited by 9 · see citing works
Self-citationShepherd, A. K., Wesley, U., & Wesley, C. S. (2010) · Developmental Dynamics · doi:10.1002/dvdy.22262 · Cited by 8 · see citing works
Repression of the Hox gene abd-A by ELAV-mediated Transcriptional Interference
Alvarez, J. J. C., Revel, M., Carrasco, J., Cléard, F., Pauli, D., Hilgers, V., Karch, F., & Maeda, R. K. (2021) · PLoS Genetics · doi:10.1371/journal.pgen.1009843 · Cited by 8 · see citing works
McQuarrie, D. W. J., & Soller, M. (2024) · Nucleic Acids Research · doi:10.1093/nar/gkae826 · Cited by 7 · see citing works
Self-citationCarrasco, J., Mateos, F., & Hilgers, V. (2022) · Cell Reports · doi:10.1016/j.celrep.2022.111542 · Cited by 7 · see citing works
Dix, T. C., Lassota, A., Bräuer, U., Haussmann, I. U., & Soller, M. (2024) · BMC Methods · doi:10.1186/s44330-024-00011-6 · Cited by 5 · see citing works
Self-citationGlobal Patterns of Tissue-Specific Alternative Polyadenylation in Drosophila
Smibert, P., Miura, P., Westholm, J. O., Shenker, S., May, G. E., Duff, M. O., Zhang, D., Eads, B. D., Carlson, J., Brown, J., et al. (2013) · Cell Reports · doi:10.1016/j.celrep.2013.03.022 · Cited by 5 · see citing works
Neuronal RNA processing: cross-talk between transcriptional regulation and RNA-binding proteins
Ozbulut, H. C., & Hilgers, V. (2024) · Frontiers in Molecular Neuroscience · doi:10.3389/fnmol.2024.1426410 · Cited by 4 · see citing works
Brenneis, G., Schwentner, M., Giribet, G., & Beltz, B. S. (2021) · Developmental Neurobiology · doi:10.1002/dneu.22852 · Cited by 5 · see citing works
RNA Pathologies in Neurological Disorders
Ohno, K., & Masuda, A. (2010) · Advances in neurobiology · doi:10.1007/978-1-4419-7104-3_14 · Cited by 1 · see citing works
Dynamically expressed ELAV is required for learning and memory in beesPreprint
Ustaoğlu, P., Gill, J. K., Doubovetzky, N., Haussmann, I. U., Devaud, J., & Soller, M. (2021) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2021.06.24.449637 · Cited by 1 · see citing works
Self-citationFan, Y. (2005) · edoc (University of Basel) · doi:10.5451/unibas-003660814
Yakulov, T. A. (2009) · Max Planck Institute for Plasma Physics
Hu proteins, a novel family of neuron-specific regulators for post-transcriptional RNA processing.
Zhu, H. (2007) · OhioLink ETD Center (Ohio Library and Information Network)
Regulation of alternative polyadenylation in Drosophila melanogaster
Oliveira, M. (2019) · Portuguese National Funding Agency for Science, Research and Technology (RCAAP Project by FCT) · doi:10.34626/zrjc-r941
Singh, D. N., & Soller, M. (2026) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.64898/2026.05.06.723318
Self-citationDix, T. C., McQuarrie, D. W. J., Bräuer, U., Tian, Y. W., Haussmann, I. U., Li, M., Fütterer, K., & Soller, M. (2026) · Genes & Development · doi:10.1101/gad.353688.126
Self-citationTian, Y. W., Hadzhiev, Y., Abis, G., Dodel, M., Alard, E. L., McQuarrie, D. W. J., Mardakheh, F. K., Conte, M., Müller, F., & Soller, M. (2026) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.64898/2026.09.17.752351
Self-citation
- Authors
- Soller, M., & White, K.
- Affiliations
- Brandeis University (US)
- ORCID
- Soller, Matthias
- Venue
- Genes & Development
- Publisher
- Cold Spring Harbor Laboratory
- Published
- 2003-01-01
- Volume
- 17
- Issue
- 20
- Pages
- 2526-2538
- ISSN
- 0890-9369 (ISSN-L)
- 1549-5477
- PMC
- PMC218147
- OpenAlex
- W2090037072
- Cited by
- 89
- References
- 55
- Citations by year
- 2026: 3 · 2025: 1 · 2024: 3 · 2023: 1 · 2022: 6 · 2021: 6 · 2020: 3 · 2019: 3 · 2018: 1 · 2017: 2 · 2016: 3 · 2015: 1 · 2014: 8 · 2013: 4 · 2012: 4
- Type
- posted content
- Language
- en
- Open access
- bronze
- doi.org
- Locations
- Genes & Development (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- University of Birmingham Research Portal (University of Birmingham) (submittedVersion)
- Funders
- National Science Foundation
- Brandeis University
- Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung
- National Institutes of Health (5p01ns044232-10)
- National Institute of Neurological Disorders and Stroke (NS44232, P01 NS-044232, NS37169)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA Research and Splicing
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA regulation and disease
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA and protein synthesis mechanisms
- Keywords
- ELAV, alternative splicing, 3' end processing, polyadenylation sites, RNA-binding proteins, Drosophila neurons, reporter gene system
- MeSH terms
- Adenosine, Neurons, Neuropeptides, Nuclear Proteins, Polymers, Ribonucleoproteins, RNA Precursors, RNA Processing, Post-Transcriptional, Transcription Factors, Genes, Reporter, Drosophila Proteins, RNA 3' Polyadenylation Signals, ELAV Proteins
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review