Cited by 15Extracellular vesicles in diseaseCellular transport and secretionNeuroscience and Neuropharmacology Research

An independent regulator of global release pathways in astrocytes generates a subtype of extracellular vesicles required for postsynaptic function

Open access
Levy-Myers, Reuben, Daudelin, Daniel, Na, Chan Hyun, Sockanathan, Shanthini·2023·Science Advances

Abstract

Extracellular vesicles (EVs) are heterogeneous in size, composition, and function. We show that the six-transmembrane protein glycerophosphodiester phosphodiesterase 3 (GDE3) regulates actin remodeling, a global EV biogenic pathway, to release an EV subtype with distinct functions. GDE3 is necessary and sufficient for releasing EVs containing annexin A1 and GDE3 from the plasma membrane via Wiskott-Aldrich syndrome protein family member 3 (WAVE3), a major regulator of actin dynamics. GDE3 is expressed in astrocytes but not neurons, yet mice lacking GDE3 [ Gde3 knockout (KO)] have decreased miniature excitatory postsynaptic current (mEPSC) amplitudes in hippocampal CA1 neurons. EVs from cultured wild-type astrocytes restore mEPSC amplitudes in Gde3 KOs, while EVs from Gde3 KO astrocytes or astrocytes inhibited for WAVE3 actin branching activity do not. Thus, GDE3-WAVE3 is a nonredundant astrocytic pathway that remodels actin to release a functionally distinct EV subtype, supporting the concept that independent regulation of global EV release pathways differentially regulates EV signaling within the cellular EV landscape.

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1126/sciadv.adg2067

Cites

8 of 8 references verified0 citation errors · 0 not checkable

Statistics

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • WAVE3 is expressed mainly in the brain, where its levels in interneurons and astrocytes are relatively high.

    “WAVE3 is also expressed mainly in the brain16, where its levels in interneurons and astrocytes are relatively high17,18.”

    From The WAVE complex in developmental and adulthood brain disorders (2025) · cites this paper as [17]

    The Results section ('GDE3 promotes MV release by regulating WAVE3-dependent actin remodeling'; page unavailable) says WAVE3 is enriched in astrocytes and demonstrates its expression in cultured astrocytes. It does not establish relatively high WAVE3 levels in interneurons. The separate citation attached to 'mainly in the brain' is not assessed here. (LLM, conf=0.86)

    Experimental — accuracy not yet measured

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Cites

Part of this paper’s reference list could not be split into single entries.

Flagged first, then by citations

Research works printed but not linked: 51

  1. [1]G. van Niel, G. D’Angelo, G. Raposo, Shedding light on the cell biology of extracellular vesicles. Nat. Rev. Mol. Cell Biol. 19, 213– 228 (2018). 29339798
  2. [2]A. Datta Chaudhuri, R. M. Dasgheyb, L. R. DeVine, H. Bi, R. N. Cole, N. J. Haughey, Stimulus-dependent modifications in astrocyte-derived extracellular vesicle cargo regulate neuronal excitability. Glia. 68, 128– 144 (2020). 31469478
  3. [3]S. Han, Z. Huo, K. Nguyen, F. Zhu, P. W. Underwood, K. B. Green Basso, T. J. George, S. J. Hughes, S. Han, K. Nguyen, P. W. Underwood, S. J. Hughes, Z. Huo, F. Zhu, K. B. G. Basso, T. J. George, The proteome of pancreatic cancer-derived exosomes reveals signatures rich in key signaling pathways. Proteomics. 19, 1800394 (2019). 31070281
  4. [4]D.-S. Choi, D.-K. Kim, Y.-K. Kim, Y. S. Gho, Proteomics of extracellular vesicles: Exosomes and ectosomes. Mass Spectrom Rev. 34, 474– 490 (2015). 24421117
  5. [5]R. Garcia-Martin, G. Wang, B. B. Brandão, T. M. Zanotto, S. Shah, S. Kumar Patel, B. Schilling, C. R. Kahn, MicroRNA sequence codes for small extracellular vesicle release and cellular retention. Nature 601, 446– 451 (2022). 34937935 PMC9035265
  6. [7]F. Teng, M. Fussenegger, Shedding light on extracellular vesicle biogenesis and bioengineering. Adv. Sci. 8, 2003505 (2020). PMC7788585 33437589
  7. [8]K. Trajkovic, C. Hsu, S. Chiantia, L. Rajendran, D. Wenzel, F. Wieland, P. Schwille, B. Brügger, M. Simons, Ceramide triggers budding of exosome vesicles into multivesicular endosomes. Science 319, 1244– 1247 (2008). 18309083
  8. [9]V. Muralidharan-Chari, J. Clancy, C. Plou, M. Romao, P. Chavrier, G. Raposo, C. D’Souza-Schorey, ARF6-regulated shedding of tumor cell-derived plasma membrane microvesicles. Curr. Biol. 19, 1875– 1885 (2009). 19896381 PMC3150487
  9. [10]M. P. Bebelman, M. J. Smit, D. M. Pegtel, S. R. Baglio, Biogenesis and function of extracellular vesicles in cancer. Pharmacol Ther. 188, 1– 11 (2018). 29476772
  10. [12]B. S. Khakh, B. Deneen, The emerging nature of astrocyte diversity. Annu. Rev. Neurosci. 42, 187– 207 (2019). 31283899
  11. [13]M. Dobrowolski, C. Cave, R. Levy-Myers, C. Lee, S. Park, B.-R. Choi, B. Xiao, W. Yang, S. Sockanathan, GDE3 regulates oligodendrocyte precursor proliferation via release of soluble CNTFRα. Development 147, dev180695 (2020). 31932351 PMC6983723
  12. [14]M. van Veen, E. Matas-Rico, K. van de Wetering, D. Leyton-Puig, K. M. Kedziora, V. de Lorenzi, Y. Stijf-Bultsma, B. van den Broek, K. Jalink, N. Sidenius, A. Perrakis, W. H. Moolenaar, Negative regulation of urokinase receptor activity by a GPI-specific phospholipase C in breast cancer cells. eLife 6, e23649 (2017). 28849762 PMC5576486
  13. [15]F. Briand-Mésange, V. Pons, S. Allart, J. Masquelier, G. Chicanne, N. Beton, B. Payrastre, G. G. Muccioli, J. Ausseil, J.-L. Davignon, J.-P. Salles, H. Chap, Glycerophosphodiesterase 3 (GDE3) is a lysophosphatidylinositol-specific ectophospholipase C acting as an endocannabinoid signaling switch.. J. of Biol. Chem. 295, 15767– 15781 (2020). 32917725 PMC7667972
  14. [16]T. Tsutsumi, R. Matsuda, K. Morito, K. Kawabata, M. Yokota, M. Nikawadori, M. Inoue-Fujiwara, S. Kawashima, M. Hidaka, T. Yamamoto, N. Yamazaki, T. Tanaka, Y. Shinohara, H. Nishi, A. Tokumura, Identification of human glycerophosphodiesterase 3 as an ecto phospholipase C that converts the G protein-coupled receptor 55 agonist lysophosphatidylinositol to bioactive monoacylglycerols in cultured mammalian cells. Biochim. Biophys. Acta Mol. Cell Biol. Lipids 1865, 158761 (2020). 32629025
  15. [17]F. Royo, C. Théry, J. M. Falcón-Pérez, R. Nieuwland, K. W. Witwer, Methods for separation and characterization of extracellular vesicles: Results of a worldwide survey performed by the ISEV rigor and standardization subcommittee. Cells 9, 1955 (2020). 32854228 PMC7563174
  16. [18]D. K. Jeppesen, A. M. Fenix, J. L. Franklin, J. N. Higginbotham, Q. Zhang, L. J. Zimmerman, D. C. Liebler, J. Ping, Q. Liu, R. Evans, W. H. Fissell, J. G. Patton, L. H. Rome, D. T. Burnette, R. J. Coffey, Reassessment of exosome composition. Cell 177, 428– 445.e18 (2019). 30951670 PMC6664447
  17. [20]M. A. Rogers, F. Buffolo, F. Schlotter, S. K. Atkins, L. H. Lee, A. Halu, M. C. Blaser, E. Tsolaki, H. Higashi, K. Luther, G. Daaboul, C. V. C. Bouten, S. C. Body, S. A. Singh, S. Bertazzo, P. Libby, M. Aikawa, E. Aikawa, Annexin A1–dependent tethering promotes extracellular vesicle aggregation revealed with single–extracellular vesicle analysis. Sci Adv. 6, eabb1244 (2020). 32938681 PMC7494353
  18. [21]F. K. Fordjour, C. Guo, Y. Ai, G. G. Daaboul, S. J. Gould, A shared, stochastic pathway mediates exosome protein budding along plasma and endosome membranes. J. Biol. Chem. 298, 102394 (2022). 35988652 PMC9512851
  19. [24]M. Karlsson, C. Zhang, L. Méar, W. Zhong, A. Digre, B. Katona, E. Sjöstedt, L. Butler, J. Odeberg, P. Dusart, F. Edfors, P. Oksvold, K. von Feilitzen, M. Zwahlen, M. Arif, O. Altay, X. Li, M. Ozcan, A. Mardonoglu, L. Fagerberg, J. Mulder, Y. Luo, F. Ponten, M. Uhlén, C. Lindskog, A single–cell type transcriptomics map of human tissues. Sci Adv. 7, eabh2169 (2021). 34321199 PMC8318366
  20. [25]J. A. Miller, N. W. Gouwens, B. Tasic, F. Collman, C. T. J. van Velthoven, T. E. Bakken, M. J. Hawrylycz, H. Zeng, E. S. Lein, A. Bernard, Common cell type nomenclature for the mammalian brain. Elife 9, e59928 (2020). 33372656 PMC7790494
  21. [26]L. M. Holt, S. T. Stoyanof, M. L. Olsen, Magnetic cell sorting for in vivo and in vitro astrocyte, neuron, and microglia analysis. Curr. Protoc. Neurosci. 88, e71 (2019). 31216394 PMC6653683
  22. [27]S. Mathivanan, R. J. Simpson, ExoCarta: A compendium of exosomal proteins and RNA. Proteomics. 9, 4997– 5000 (2009). 19810033
  23. [28]H. Kalra, R. J. Simpson, H. Ji, E. Aikawa, P. Altevogt, P. Askenase, V. C. Bond, F. E. Borràs, X. Breakefield, V. Budnik, E. Buzas, G. Camussi, A. Clayton, E. Cocucci, J. M. Falcon-Perez, S. Gabrielsson, Y. S. Gho, D. Gupta, H. C. Harsha, A. Hendrix, A. F. Hill, J. M. Inal, G. Jenster, E.-M. Krämer-Albers, S. K. Lim, A. Llorente, J. Lötvall, A. Marcilla, L. Mincheva-Nilsson, I. Nazarenko, R. Nieuwland, E. N. M. Nolte e-’t Hoen, A. Pandey, T. Patel, M. G. Piper, S. Pluchino, T. S. K. Prasad, L. Rajendran, G. Raposo, M. Record, G. E. Reid, F. Sánchez-Madrid, R. M. Schiffelers, P. Siljander, A. Stensballe, W. Stoorvogel, D. Taylor, C. Thery, H. Valadi, B. W. M. van Balkom, J. Vázquez, M. Vidal, M. H. M. Wauben, M. Yáñez-Mó, M. Zoeller, S. Mathivanan, Vesiclepedia: A compendium for extracellular vesicles with continuous community annotation. PLOS Biol. 10, e1001450 (2012). 23271954 PMC3525526
  24. [29]M. Colombo, C. Moita, G. van Niel, J. Kowal, J. Vigneron, P. Benaroch, N. Manel, L. F. Moita, C. Théry, G. Raposo, Analysis of ESCRT functions in exosome biogenesis, composition and secretion highlights the heterogeneity of extracellular vesicles. J. Cell Sci. 126, 5553– 5565 (2013). 24105262
  25. [30]T. C. Branon, J. A. Bosch, A. D. Sanchez, N. D. Udeshi, T. Svinkina, S. A. Carr, J. L. Feldman, N. Perrimon, A. Y. Ting, Efficient proximity labeling in living cells and organisms with TurboID. Nat. Biotechnol. 36, 880– 887 (2018). 30125270 PMC6126969
  26. [31]A. E. Sedgwick, J. W. Clancy, M. Olivia Balmert, C. D’Souza-Schorey, Extracellular microvesicles and invadopodia mediate non-overlapping modes of tumor cell invasion. Sci Rep. 5, 14748 (2015). 26458510 PMC4602187
  27. [32]S. Sinha, D. Hoshino, N. H. Hong, K. C. Kirkbride, N. E. Grega-Larson, M. Seiki, M. J. Tyska, A. M. Weaver, Cortactin promotes exosome secretion by controlling branched actin dynamics. J. Cell Biol. 214, 197– 213 (2016). 27402952 PMC4949450
  28. [33]A. R. Nager, J. S. Goldstein, V. Herranz-Pérez, D. Portran, F. Ye, J. M. Garcia-Verdugo, M. V. Nachury, An actin network dispatches ciliary GPCRs into extracellular vesicles to modulate signaling. Cell 168, 252– 263.e14 (2017). 28017328 PMC5235987
  29. [34]D. Corda, T. Kudo, P. Zizza, C. Iurisci, E. Kawai, N. Kato, N. Yanaka, S. Mariggiò, The developmentally regulated osteoblast phosphodiesterase GDE3 is glycerophosphoinositol-specific and modulates cell growth. J. Biol. Chem. 284, 24848– 24856 (2009). 19596859 PMC2757188
  30. [35]N. Yanaka, Y. Nogusa, Y. Fujioka, Y. Yamashita, N. Kato, Involvement of membrane protein GDE2 in retinoic acid-induced neurite formation in Neuro2A cells. FEBS Lett. 581, 712– 718 (2007). 17275818
  31. [36]K. Rottner, T. E. B. Stradal, B. Chen, WAVE regulatory complex. Curr. Biol. 31, R512– R517 (2021). 34033782 PMC8882368
  32. [37]S. Kurisu, T. Takenawa, The WASP and WAVE family proteins. Genome Biol. 10, 226 (2009). 19589182 PMC2718491
  33. [39]V. L. R. Rao, M. K. Başkaya, A. Doǧan, J. D. Rothstein, R. J. Dempsey, Traumatic brain injury down-regulates glial glutamate transporter (GLT-1 and GLAST) proteins in rat brain. J Neurochem. 70, 2020– 2027 (1998). 9572288
  34. [40]F. Cocozza, E. Grisard, L. Martin-Jaular, M. Mathieu, C. Théry, SnapShot: Extracellular vesicles. Cell. 182, 262– 262.e1 (2020). 32649878
  35. [41]B. Hetrick, M. S. Han, L. A. Helgeson, B. J. Nolen, Small molecules CK-666 and CK-869 inhibit actin-related protein 2/3 complex by blocking an activating conformational change. Chem. Biol. 20, 701– 712 (2013). 23623350 PMC3684959
  36. [42]S. Bhattacharyya, Inside story of group I metabotropic glutamate receptors (mGluRs). Int J Biochem Cell Biol. 77, 205– 212 (2016). 26987586
  37. [43]F. Y. Carroll, A. Stolle, P. M. Beart, A. Voerste, I. Brabet, F. Mauler, C. Joly, H. Antonicek, J. Bockaert, T. Müller, J. P. Pin, L. Prézeau, BAY36–7620: A potent non-competitive mGlu1 receptor antagonist with inverse agonist activity. Mol Pharmacol. 59, 965– 973 (2001). 11306677 PMC2573968
  38. [44]A. Pagano, D. Rüegg, S. Litschig, N. Stoehr, C. Stierlin, M. Heinrich, P. Floersheim, L. Prezèau, F. Carroll, J. P. Pin, A. Cambria, I. Vranesic, P. J. Flor, F. Gasparini, R. Kuhn, The non-competitive antagonists 2-methyl-6-(phenylethynyl)pyridine and 7-hydroxyiminocyclopropan [b]chromen-1a-carboxylic acid ethyl ester interact with overlapping binding pockets in the transmembrane region of group I metabotropic glutamate receptors. J. Biol. Chem. 275, 33750– 33758 (2000). 10934211
  39. [45]F. Ango, L. Prézeau, T. Muller, J. C. Tu, B. Xiao, P. F. Worley, J. P. Pin, J. Bockaert, L. Fagni, Agonist-independent activation of metabotropic glutamate receptors by the intracellular protein Homer. Nature 411, 962– 965 (2001). 11418862
  40. [46]L. C. Foo, N. J. Allen, E. A. Bushong, P. B. Ventura, W.-S. Chung, L. Zhou, J. D. Cahoy, R. Daneman, H. Zong, M. H. Ellisman, B. A. Barres, Development of a method for the purification and culture of rodent astrocytes. Neuron 71, 799– 811 (2011). 21903074 PMC3172573
  41. [47]C. Tricarico, J. Clancy, C. D’Souza-Schorey, Biology and biogenesis of shed microvesicles. Small GTPases 8, 220– 232 (2016). 27494381 PMC5680703
  42. [49]S. Zou, U. Kumar, Cannabinoid receptors and the endocannabinoid system: Signaling and function in the central nervous system. Int. J. Mol. Sci. 19, 833 (2018). 29533978 PMC5877694
  43. [51]M. R. Patel, A. M. Weaver, Astrocyte-derived small extracellular vesicles promote synapse formation via fibulin-2-mediated TGF-β signaling. Cell Rep. 34, 108829 (2021). 33691102 PMC8002899
  44. [52]Y. Rong, C. Ji, Z. Wang, X. Ge, J. Wang, W. Ye, P. Tang, D. Jiang, J. Fan, G. Yin, W. Liu, W. Cai, Small extracellular vesicles encapsulating CCL2 from activated astrocytes induce microglial activation and neuronal apoptosis after traumatic spinal cord injury. J Neuroinflammation. 18, 196 (2021). 34511129 PMC8436564
  45. [53]S. Goebbels, I. Bormuth, U. Bode, O. Hermanson, M. H. Schwab, K.-A. Nave, Genetic targeting of principal neurons in neocortex and hippocampus of NEX-Cre mice. Genesis 44, 611– 621 (2006). 17146780
  46. [55]J. T. Ting, B. R. Lee, P. Chong, G. Soler-Llavina, C. Cobbs, C. Koch, H. Zeng, E. Lein, Preparation of acute brain slices using an optimized N-methyl-d-glucamine protective recovery method. J. Vis. Exp., e53825 (2018). PMC5931343 29553547
  47. [56]J. Rappsilber, Y. Ishihama, M. Mann, Stop and go extraction tips for matrix-assisted laser desorption/ionization, nanoelectrospray, and LC/MS sample pretreatment in proteomics. Anal Chem. 75, 663– 670 (2003). 12585499
  48. [57]J. Peng, S. P. Gygi, Proteomics: The move to mixtures. J. Mass Spectrom. 36, 1083– 1091 (2001). 11747101
  49. [58]J. K. Eng, A. L. McCormack, J. R. Yates, An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database. J. Am. Soc. Mass Spectrom. 5, 976– 989 (1994). 24226387
  50. [59]J. Cox, M. Mann, MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification. Nat. Biotechnol. 26, 1367– 1372 (2008). 19029910
  51. [60]B.-R. Choi, C. Cave, C. H. Na, S. Sockanathan, GDE2-dependent activation of canonical Wnt signaling in neurons regulates oligodendrocyte maturation. Cell Rep. 31, 107540 (2020). 32375055 PMC7254694

Cited by

Sorted by citations

Authors
Levy-Myers, R., Daudelin, D., Na, C. H., & Sockanathan, S.
Affiliations
Johns Hopkins University (US)
Corresponding author
Sockanathan, Shanthini
Venue
Science Advances
Published
2023-06-23
Volume
9
Issue
25
Pages
eadg2067-eadg2067
ISSN
2375-2548 (ISSN-L)
OpenAlex
W4381804053
Cited by
15
References
8
Citations by year
2026: 1 · 2025: 6 · 2024: 6 · 2023: 2
FWCI
1.33
Type
journal article
Language
en
Open access
Licence
cc-by
Locations
  • Science Advances (publishedVersion, cc-by)
  • PubMed Central (publishedVersion, cc-by)
  • PubMed (publishedVersion)
Funders
  • National Institutes of Health (1s10od021844-01)
  • National Institute on Aging (R56AG056169, F31AG067632, R01AG056169, U19AG065169)
  • National Institute of General Medical Sciences (T32GM007445)
  • National Institute of Neurological Disorders and Stroke (R01NS046336, T32NS091018)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Extracellular vesicles in disease
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Cellular transport and secretion
  • Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Neuroscience and Neuropharmacology Research
Keywords
extracellular vesicles, GDE3, WAVE3, astrocytes, actin cytoskeleton remodeling, actin filament branching, annexin A1, miniature excitatory postsynaptic currents, postsynaptic function, CA1 pyramidal neurons
MeSH terms
Extracellular Vesicles, Actins, Animals, Astrocytes, Cell Membrane, Signal Transduction, Mice

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review