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Bacteria of Dental Caries in Primary and Permanent Teeth in Children and Young Adults
Open accessAbstract
Although Streptococcus mutans has been implicated as a major etiological agent of dental caries, our cross-sectional preliminary study indicated that 10% of subjects with rampant caries in permanent teeth do not have detectable levels of S. mutans . Our aims were to use molecular methods to detect all bacterial species associated with caries in primary and permanent teeth and to determine the bacterial profiles associated with different disease states. Plaque was collected from 39 healthy controls and from intact enamel and white-spot lesions, dentin lesions, and deep-dentin lesions in each of 51 subjects with severe caries. 16S rRNA genes were PCR amplified, cloned, and sequenced to determine species identities. In a reverse-capture checkerboard assay, 243 samples were analyzed for 110 prevalent bacterial species. A sequencing analysis of 1,285 16S rRNA clones detected 197 bacterial species/phylotypes, of which 50% were not cultivable. Twenty-two new phylotypes were identified. PROC MIXED tests revealed health- and disease-associated species. In subjects with S. mutans , additional species, e.g., species of the genera Atopobium , Propionibacterium , and Lactobacillus , were present at significantly higher levels than those of S. mutans . Lactobacillus spp., Bifidobacterium dentium , and low-pH non- S. mutans streptococci were predominant in subjects with no detectable S. mutans . Actinomyces spp. and non- S. mutans streptococci were predominant in white-spot lesions, while known acid producers were found at their highest levels later in disease. Bacterial profiles change with disease states and differ between primary and secondary dentitions. Bacterial species other than S. mutans , e.g., species of the genera Veillonella , Lactobacillus , Bifidobacterium , and Propionibacterium , low-pH non- S. mutans streptococci, Actinomyces spp., and Atopobium spp., likely play important roles in caries progression.
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“Commensal microbiota comprise the majority of cells in the body and play a key role in human health1-5,10.”
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Cites
The neighbor-joining method: a new method for reconstructing phylogenetic trees.
Saitou, N., & Nei, M. (1987) · Molecular Biology and Evolution · doi:10.1093/oxfordjournals.molbev.a040454 · Cited by 59,959
Evolution of Protein Molecules
JUKES, T. H., & CANTOR, C. R. (1969) · Mammalian Protein Metabolism · doi:10.1016/b978-1-4832-3211-9.50009-7 · Cited by 11,032
Defining the normal bacterial flora of the oral cavity
Aas, J. A., Paster, B. J., Stokes, L. N., Olsen, I., & Dewhirst, F. E. (2005) · Journal of Clinical Microbiology · doi:10.1128/jcm.43.11.5721-5732.2005 · Cited by 3,092
Self-citationde Peer, Y. V., & Wächter, R. D. (1994) · Computer applications in the biosciences · doi:10.1093/bioinformatics/10.5.569 · Cited by 2,247
Occlusal Caries: Biological Approach for Its Diagnosis and Management
Carvalho, J. C., Dige, I., Mačhiulskienė, V., Qvist, V., Bakhshandeh, A., Parolo, C. C. F., & Maltz, M. (2016) · Caries Research · doi:10.1159/000448662 · Cited by 2,159
Bacterial Diversity in Human Subgingival Plaque
Paster, B. J., Boches, S. K., Galvin, J. L., Ericson, R. E., Lau, C. N., Levanos, V. A., Sahasrabudhe, A., & Dewhirst, F. E. (2001) · Journal of Bacteriology · doi:10.1128/jb.183.12.3770-3783.2001 · Cited by 2,008
Self-citationMicrobial ecology of dental plaque and its significance in health and disease
Marsh, P. D. (1994) · Advances in Dental Research · doi:10.1177/08959374940080022001 · Cited by 1,278
Oral Microbial Communities: Biofilms, Interactions, and Genetic Systems
Kolenbrander, P. E. (2000) · Annual Review of Microbiology · doi:10.1146/annurev.micro.54.1.413 · Cited by 894
Ecological Hypothesis of Dentin and Root Caries
Takahashi, N., & Nyvad, B. (2016) · Caries Research · doi:10.1159/000447309 · Cited by 737
Orla-Jensen, S. (1919) · Cited by 698
Demonstration of the etiologic role of streptococci in experimental caries in the hamster
FITZGERALD, R. J., & Keyes, P. H. (1960) · The Journal of the American Dental Association · doi:10.14219/jada.archive.1960.0138 · Cited by 571
Molecular Analysis of Bacterial Species Associated with Childhood Caries
Becker, M. R., Paster, B. J., Leys, E. J., Moeschberger, M. L., Kenyon, S. G., Galvin, J. L., Boches, S. K., Dewhirst, F. E., & Griffen, A. L. (2002) · Journal of Clinical Microbiology · doi:10.1128/jcm.40.3.1001-1009.2002 · Cited by 546
Self-citationKazor, C. E., Mitchell, P. M., Lee, A. M., Stokes, L. N., Loesche, W. J., Dewhirst, F. E., & Paster, B. J. (2003) · Journal of Clinical Microbiology · doi:10.1128/jcm.41.2.558-563.2003 · Cited by 533
Self-citationCisar, J. O., Kolenbrander, P. E., & McIntire, F. C. (1979) · Infection and Immunity · doi:10.1128/iai.24.3.742-752.1979 · Cited by 494
Molecular Analysis of the Microflora Associated with Dental Caries
Munson, M. A., Banerjee, A., Watson, T. F., & Wade, W. G. (2004) · Journal of Clinical Microbiology · doi:10.1128/jcm.42.7.3023-3029.2004 · Cited by 401
Evaluation of bacterial nitrate reduction in the human oral cavity
Doel, J. J., Benjamin, N., Hector, M. P., Rogers, M., & Allaker, R. P. (2005) · European Journal of Oral Sciences · doi:10.1111/j.1600-0722.2004.00184.x · Cited by 362
The complex oral microflora of high‐risk individuals and groups and its role in the caries process
Beighton, D. (2005) · Community Dentistry and Oral Epidemiology · doi:10.1111/j.1600-0528.2005.00232.x · Cited by 360
Liesack, W., WEYLAND, H., & Stackebrandt, E. S. (1991) · Microbial Ecology · doi:10.1007/bf02539153 · Cited by 346
Martin, F. E., Nadkarni, M. A., Jacques, N. A., & Hunter, N. (2002) · Journal of Clinical Microbiology · doi:10.1128/jcm.40.5.1698-1704.2002 · Cited by 297
The non‐specific theory in microbial etiology of inflammatory periodontal diseases
Theilade, E. (1986) · Journal Of Clinical Periodontology · doi:10.1111/j.1600-051x.1986.tb01425.x · Cited by 283
Egland, P. G., Palmer, R. J., Jr., & Kolenbrander, P. E. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0407457101 · Cited by 256
Molecular Analysis of Microbial Diversity in Advanced Caries
Chhour, K.-L., Nadkarni, M. A., Byun, R., Martin, F. E., Jacques, N. A., & Hunter, N. (2005) · Journal of Clinical Microbiology · doi:10.1128/jcm.43.2.843-849.2005 · Cited by 252
Microbial Risk Indicators of Early Childhood Caries
Corby, P. M. A., Lyons‐Weiler, J., Bretz, W. A., Hart, T. C., A., J., Boumenna, T., Goss, J., Corby, A. L., Henriques, G. M., Weyant, R. J., et al. (2005) · Journal of Clinical Microbiology · doi:10.1128/jcm.43.11.5753-5759.2005 · Cited by 230
Self-citationThe Predominant Cultivable Flora of Carious Plaque and Carious Dentine
Loesche, W. J., & Syed, S. A. (2009) · Caries Research · doi:10.1159/000259844 · Cited by 221
Changes in the Cultivable Flora in Deep Carious Lesions following a Stepwise Excavation Procedure
Bjørndal, L., & Larsen, T. E. (2000) · Caries Research · doi:10.1159/000016631 · Cited by 219
Predominant Obligate Anaerobes in Human Carious Dentin
Hoshino, E. (1985) · Journal of Dental Research · doi:10.1177/00220345850640100301 · Cited by 207
Gibbons, R. J., & van Houte, J. (1975) · Annual Review of Medicine · doi:10.1146/annurev.me.26.020175.001005 · Cited by 194
Analysis of pH-driven disruption of oral microbial communities in vitro
Bradshaw, D. J., & Marsh, P. D. (1998) · Caries Research · doi:10.1159/000016487 · Cited by 176
Symbiosis of Streptococcus mutans and Veillonella alcalescens in mixed continuous cultures
Mikx, F. H. M., & van der Hoeven, J. S. (1975) · Archives of Oral Biology · doi:10.1016/0003-9969(75)90224-1 · Cited by 132
Microbiological studies of carious dentine from human teeth with irreversible pulpitis
Hahn, C., Falkler, W. A., & Minah, G. E. (1991) · Archives of Oral Biology · doi:10.1016/0003-9969(91)90077-8 · Cited by 127
Identification of oral streptococci using PCR-based, reverse-capture, checkerboard hybridization
Paster, B. J., Bartoszyk, I. M., & Dewhirst, F. E. (1998) · Methods in Cell Science · doi:10.1023/a:1009715710555 · Cited by 107
Self-citationIdentification of oral streptococci using PCR-based, reverse-capture, checkerboard hybridization
Paster, B. J., Bartoszyk, I. M., & Dewhirst, F. E. (1998) · Springer eBooks · doi:10.1007/978-94-017-2258-2_25 · Cited by 90
Self-citationCoaggregation profiles of the microflora from root surface caries lesions
Shen, S., Samaranayake, L. P., & Yip, H. (2004) · Archives of Oral Biology · doi:10.1016/j.archoralbio.2004.07.002 · Cited by 85
Detection and strain identification of Actinobacillus actinomycetemcomitans by nested PCR
Leys, E. J., Griffen, A. L., Strong, S. J., & Fuerst, P. A. (1994) · Journal of Clinical Microbiology · doi:10.1128/jcm.32.5.1288-1294.1994 · Cited by 76
Self-citationAntimicrobial effect of acidified nitrite on cariogenic bacteria
Silva Mendez, L. S., Allaker, R. P., Hardie, J. M., & Benjamin, N. (1999) · Oral Microbiology and Immunology · doi:10.1034/j.1399-302x.1999.140612.x · Cited by 72
Carious Dentine Provides a Habitat for a Complex Array of Novel Prevotella -Like Bacteria
Nadkarni, M. A., Caldon, C. E., Chhour, K.-L., Fisher, I. P., Martin, F. E., Jacques, N. A., & Hunter, N. (2004) · Journal of Clinical Microbiology · doi:10.1128/jcm.42.11.5238-5244.2004 · Cited by 56
Noorda, W. D., Purdell-Lewis, D. J., van Montfort, A. M. A. P., & Weerkamp, A. H. (2009) · Caries Research · doi:10.1159/000261134 · Cited by 55
Nathoo, S., Giniger, M., Proskin, H. M., Stewart, B., Robinson, R., Collins, M., DeVizio, W., Petrone, M., & Volpe, A. R. (2002) · PubMed · Cited by 54
New Actinomyces and Streptococcus coaggregation groups among human oral isolates from the same site
Kolenbrander, P. E., Inouye, Y., & Holdeman, L. V. (1983) · Infection and Immunity · doi:10.1128/iai.41.2.501-506.1983 · Cited by 49
The specific plaque hypothesis and the antimicrobial treatment of periodontal disease.
Loesche, W. J. (1992) · PubMed · Cited by 46
Burt, B. A., Loesche, W. J., & Eklund, S. A. (2009) · Caries Research · doi:10.1159/000260843 · Cited by 29
The Lactic Microflora of the Oral Cavity
Hogg, S. D. (1992) · Springer eBooks · doi:10.1007/978-1-4615-3522-5_5 · Cited by 6
Flagged first, then by citations
Research works printed but not linked: 1
- Anusavice, K. J. 2002. Dental caries: risk assessment and treatment solutions for an elderly population. Compend. Contin. Educ. Dent.23:12-20.
Cited by
Sorted by citations
Occlusal Caries: Biological Approach for Its Diagnosis and Management
Carvalho, J. C., Dige, I., Mačhiulskienė, V., Qvist, V., Bakhshandeh, A., Parolo, C. C. F., & Maltz, M. (2016) · Caries Research · doi:10.1159/000448662 · Cited by 2,159
“Site-specific sampling of occlusal caries lesions has already been performed and analyzed by the newer molecular techniques, but the studies have been limited to only include more advanced stages of caries lesions involving the dentin [Munson et al., 2004; Aas et al., 2008; Arif et al., 2008; Mantzourani et al., 2009;…”
BackgroundMethodInfluentialGlobal Epidemiology of Campylobacter Infection
Kaakoush, N. O., Castaño‐Rodríguez, N., Mitchell, H. M., & Man, S. M. (2015) · Clinical Microbiology Reviews · doi:10.1128/cmr.00006-15 · Cited by 1,542
“showae in plaque from whitespot or dentin lesions of patients with periodontal disease compared with the levels in healthy subjects (135), while another reported that C.”
ResultThe Role of Bacteria in the Caries Process
Takahashi, N., & Nyvad, B. (2010) · Journal of Dental Research · doi:10.1177/0022034510379602 · Cited by 1,250
Exploring Microbial Diversity and Taxonomy Using SSU rRNA Hypervariable Tag Sequencing
Huse, S. M., Dethlefsen, L., Huber, J. A., Welch, D. B. M., Relman, D. A., & Sogin, M. L. (2008) · PLoS Genetics · doi:10.1371/journal.pgen.1000255 · Cited by 1,020
“Other recent human health studies include microbes in breast milk [18], chronic wounds [19], human gut [20], dental caries [21], and childcare facilities [22].”
BackgroundEcological Hypothesis of Dentin and Root Caries
Takahashi, N., & Nyvad, B. (2016) · Caries Research · doi:10.1159/000447309 · Cited by 737
“Proteolytic bacteria, such as Prevotella and Propionibacterium species, have been isolated from dentin carious lesions [Aas et al., 2008] and root surfaces [Preza et al.”
BackgroundInfluential
Metadata
- Authors
- Aas, J. A., Griffen, A. L., Dardis, S. R., Lee, A. M., Olsen, I., Dewhirst, F. E., Leys, E. J., & Paster, B. J.
- Affiliations
- University of Oslo (NO)
- Department of Pediatric Dentistry
- The Forsyth Institute (US)
- Harvard University (US)
- The Ohio State University (US)
- Corresponding author
- Aas, Jørn A.
- Venue
- Journal of Clinical Microbiology
- Publisher
- American Society for Microbiology
- Published
- 2008-04
- Volume
- 46
- Issue
- 4
- Pages
- 1407-1417
- ISSN
- 0095-1137 (ISSN-L)
- 1098-660X
- PMC
- PMC2292933
- OpenAlex
- W2104771379
- Cited by
- 952
- References
- 42
- Citations by year
- 2026: 22 · 2025: 36 · 2024: 61 · 2023: 62 · 2022: 87 · 2021: 80 · 2020: 84 · 2019: 64 · 2018: 63 · 2017: 46 · 2016: 50 · 2015: 42 · 2014: 53 · 2013: 43 · 2012: 46
- FWCI
- 42.44
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Journal of Clinical Microbiology (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Universitetet i Oslo
- National Institutes of Health
- National Institute of Dental and Craniofacial Research (U01DE016937, DE016125, R01DE016125, DE11443, R01DE011443)
- Topics
- Health Sciences › Dentistry › Periodontics › Oral microbiology and periodontitis research
- Health Sciences › Dentistry › General Dentistry › Dental Health and Care Utilization
- Health Sciences › Dentistry › General Dentistry › Dental materials and restorations
- Keywords
- dental caries, Streptococcus mutans, primary teeth, permanent teeth, bacterial species composition, 16S rRNA gene sequencing, white spot lesions, dentin lesions, Lactobacillus, Bifidobacterium dentium, Atopobium, Propionibacterium, Actinomyces, Veillonella, caries progression, caries etiology, children and young adults
- MeSH terms
- Adolescent, Adult, Child, Child, Preschool, Dental Caries, Gram-Positive Bacteria, Humans, Molecular Sequence Data, RNA, Ribosomal, 16S, Tooth, Tooth, Deciduous, Gram-Positive Bacterial Infections, Sequence Analysis, DNA
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