CC-90009, a novel cereblon E3 ligase modulator, targets acute myeloid leukemia blasts and leukemia stem cells
Open accessAbstract
A number of clinically validated drugs have been developed by repurposing the CUL4-DDB1-CRBN-RBX1 (CRL4CRBN) E3 ubiquitin ligase complex with molecular glue degraders to eliminate disease-driving proteins. Here, we present the identification of a first-in-class GSPT1-selective cereblon E3 ligase modulator, CC-90009. Biochemical, structural, and molecular characterization demonstrates that CC-90009 coopts the CRL4CRBN to selectively target GSPT1 for ubiquitination and proteasomal degradation. Depletion of GSPT1 by CC-90009 rapidly induces acute myeloid leukemia (AML) apoptosis, reducing leukemia engraftment and leukemia stem cells (LSCs) in large-scale primary patient xenografting of 35 independent AML samples, including those with adverse risk features. Using a genome-wide CRISPR-Cas9 screen for effectors of CC-90009 response, we uncovered the ILF2 and ILF3 heterodimeric complex as a novel regulator of cereblon expression. Knockout of ILF2/ILF3 decreases the production of full-length cereblon protein via modulating CRBN messenger RNA alternative splicing, leading to diminished response to CC-90009. The screen also revealed that the mTOR signaling and the integrated stress response specifically regulate the response to CC-90009 in contrast to other cereblon modulators. Hyperactivation of the mTOR pathway by inactivation of TSC1 and TSC2 protected against the growth inhibitory effect of CC-90009 by reducing CC-90009-induced binding of GSPT1 to cereblon and subsequent GSPT1 degradation. On the other hand, GSPT1 degradation promoted the activation of the GCN1/GCN2/ATF4 pathway and subsequent apoptosis in AML cells. Collectively, CC-90009 activity is mediated by multiple layers of signaling networks and pathways within AML blasts and LSCs, whose elucidation gives insight into further assessment of CC-90009s clinical utility. These trials were registered at www.clinicaltrials.gov as #NCT02848001 and #NCT04336982).
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TL;DR
CC-90009 is a first-in-class GSPT1-selective cereblon E3 ligase modulator that induces GSPT1 degradation, acute AML apoptosis, and elimination of leukemia stem cells. Its activity is modulated by ILF2/ILF3-dependent CRBN splicing, mTOR signaling, and the GCN1/GCN2/ATF4 integrated stress response.
Key findings
- CC-90009 selectively degraded GSPT1 with minimal effect on the rest of the proteome and did not degrade IKZF1, HBS1L, or CK1a; the GSPT1 G575N mutation conferred complete resistance, and GSPT1 stabilization blocked the anti-AML response, indicating GSPT1 degradation is necessary and sufficient for activity.
- In 35 primary AML xenografts, 24 responders showed 52% to 100% reduction of CD45+CD33+ AML cells in injected femur and 62% to 99% in noninjected bones; 8 partial responders had 20% to 60% relative reduction, and 3 nonresponders had <20% relative reduction.
- In vitro, 100 nM CC-90009 reduced GSPT1 by >70% in 9 of 23 patient samples, 50% to 70% in 8, and <50% in 6; LSC frequency decreased ninefold in representative sample AML3, 3 of 12 tested samples had statistically significant LSC frequency decreases, and 12 of 27 high-LSC17 cases showed >90% depletion of leukemic graft.
- A genome-wide CRISPR-Cas9 screen identified ILF2/ILF3 as regulators of CRBN alternative splicing, TSC1/TSC2 loss as mTOR-mediated protection against GSPT1 degradation, and GCN1/GCN2/ATF4 as mediators of CC-90009-induced integrated stress response and apoptosis.
Methods
- Biochemical, structural, and molecular characterization included cocrystallization of CC-90009 with GSPT1, DDB1, and cereblon; immunoblotting; proteomics; and binding/degradation assays.
- A genome-wide CRISPR-Cas9 screen was performed in U937 cells using a pooled lentiviral library targeting ~19,000 protein-encoding genes, with CC-90009 or DMSO treatment, followed by RNA-sequencing and quantitative RT-PCR for CRBN splicing and CRISPR competition assays.
- Primary AML samples were tested in vitro (23 samples) and in vivo by xenografting 35 samples in NOD.SCID mice, with serial limiting dilution assays in secondary recipients and LSC17 scoring.
Limitations
- The paper states heterogeneous responses among patient samples in apoptosis, differentiation, and retention of primitive CD34+ cells; a few samples showed increased LSC frequency with CC-90009 treatment, which may relate to distinct GSPT1 levels or LSC subclones, and clonal tracking studies in future clinical trials are needed.
- The paper notes OCI-AML3 resistance is associated with insufficient GSPT1 degradation, and the CRISPR screen was performed in U937 cells, so generalizability across all AML contexts is not fully established.
- The reported data are preclinical; the abstract states the findings give insight into further assessment of clinical utility, with trials registered as NCT02848001 and NCT04336982, but no clinical efficacy outcomes are reported in this paper.
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Claims the paper makes
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- Findingown data
The CRISPR screen revealed that the mTOR signaling and the integrated stress response specifically regulate the response to CC-90009 in contrast to other cereblon modulators.
“The screen also revealed that the mTOR signaling and the integrated stress response specifically regulate the response to CC-90009 in contrast to other cereblon modulators.”
Quote in the paperSubstantial claim - Findingown data
CC-90009 coopts the CRL4 CRBN to selectively target GSPT1 for ubiquitination and proteasomal degradation.
“Biochemical, structural, and molecular characterization demonstrates that CC-90009 coopts the CRL4 CRBN to selectively target GSPT1 for ubiquitination and proteasomal degradation.”
Quote in the paperSubstantial claim - Findingown data
Knockout of ILF2/ILF3 decreases the production of full-length cereblon protein via modulating CRBN messenger RNA alternative splicing, leading to diminished response to CC-90009.
“Knockout of ILF2/ ILF3 decreases the production of full-length cereblon protein via modulating CRBN messenger RNA alternative splicing, leading to diminished response to CC-90009.”
Quote in the paperSubstantial claim - Findingown data
Hyperactivation of the mTOR pathway by inactivation of TSC1 and TSC2 protected against the growth inhibitory effect of CC-90009 by reducing CC-90009-induced binding of GSPT1 to cereblon and subsequent GSPT1 degradation.
“Hyperactivation of the mTOR pathway by inactivation of TSC1 and TSC2 protected against the growth inhibitory effect of CC-90009 by reducing CC-90009-induced binding of GSPT1 to cereblon and subsequent GSPT1 degradation.”
Quote in the paperSubstantial claim - Findingreasoning
GSPT1 degradation promoted the activation of the GCN1/GCN2/ATF4 pathway and subsequent apoptosis in AML cells.
“On the other hand, GSPT1 degradation promoted the activation of the GCN1/GCN2/ATF4 pathway and subsequent apoptosis in AML cells.”
Quote in the paperSubstantial claim
- Findingown data
A genomewide CRISPR-Cas9 screen uncovered the ILF2 and ILF3 heterodimeric complex as a novel regulator of cereblon expression.
“Using a genomewide CRISPR-Cas9 screen for effectors of CC-90009 response, we uncovered the ILF2 and ILF3 heterodimeric complex as a novel regulator of cereblon expression.”
Quote in the paperSubstantial claim - Findingown data
Knockout of TSC1 or TSC2 resulted in enhancement of S6K1 phosphorylation, indicating mTOR hyperactivation.
“Knockout of TSC1 or TSC2 resulted in enhancement of S6K1 phosphorylation, indicating mTOR hyperactivation (Figure 4A; supplemental Figure 5A).”
Quote in the paperSubstantial claim - Findingown data
In 24 of 35 primary AML xenograft samples, CC-90009 significantly reduced CD45+33+ AML cells by 52% to 100% in injected femur and 62% to 99% in noninjected bones compared with vehicle-treated mice.
“In 24 samples, CC-90009 significantly reduced CD45 1 33 1 AML cells by 52% to 100% in injected femur (RF) and 62% to 99% in noninjected bones (BM), compared with vehicle-treated mice (Figure 6D; Table 1).”
Quote in the paperSubstantial claim - Findingown data
TSC1 loss significantly reduced the interaction between HA-tagged GSPT1 and endogenous cereblon induced by CC-90009.
“Consistent with this hypothesis, TSC1 loss significantly reduced the interaction between HAtagged GSPT1 and endogenous cereblon induced by CC-90009 (Figure 4F).”
Quote in the paperSubstantial claim - Findingown data
ILF2 knockout displayed the same effect as ILF3 knockout on cereblon expression and CC-90009 response in U937 cells.
“ILF2 knockout displayed the same effect as did ILF3 knockout in U937 (supplemental Figure 4A-C).”
Quote in the paperSubstantial claim - Findingown data
TSC1 or TSC2 deficiency conferred a growth advantage in the presence of, but not in the absence of, CC-90009 in U937 and OCI-AML2 cells.
“Consistent with the CRISPR screen, TSC1 or TSC2 deficiency conferred a growth advantage in the presence of, but not in the absence of, CC-90009 in U937 and OCI-AML2, when tested in the CRISPR competition assay (Figure 4B-C; supplemental Figure 5B).”
Quote in the paperSubstantial claim - Findingown data
Reintroduction of GCN2 wild-type, but not any of its enzymatically dead mutants T899A/T904A, K619R, and F1143L/R1144L, significantly restored the response to CC-90009 in U937 GCN2-/- cells.
“Reintroduction of GCN2 wild-type, but not any of its enzymatically dead mutants T899A/T904A, K619R, and F1143L/R1144L, significantly restored the response to CC-90009 in U937 GCN2 2/2 cells (Figure 5G-H).”
Quote in the paperSubstantial claim - Findingown data
Transcriptomic analysis revealed a drastic change of exon usage of CRBN, but not its total mRNA level, in response to ILF3 loss.
“This transcriptomic analysis revealed a drastic change of exon usage of CRBN, but not its total mRNA level, in response to ILF3 loss (Figure 3E-F; supplemental Table 3).”
Quote in the paperSubstantial claim - Findingown data
A significant fraction of CC-90009-enriched genes encode proteins known to be essential for the biological activities of all cereblon modulators, including subunits of the CRL4 CRBN complex and the COP9 signalosome, UBE2D3, UBE2G1, components of the NEDD8 conjugation pathway, and CAND1.
“As expected, a significant fraction of CC-90009-enriched genes encode proteins known to be essential for the biological activities of all cereblon modulators, including subunits of the CRL4 CRBN complex and the COP9 signalosome, ubiquitin conjugation enzymes UBE2D3 and UBE2G1, components of the NEDD8 conjugation pathway, and the Cullin Ring E3 ligase assembly factor CAND1 (Figure 2D-E).[31][32][33”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [31][32][33][34][35]
Not checked in the free run.
- Findingown data
GSPT1 interaction with cereblon and CC-90009 is mediated by a β-hairpin degron loop formed by GSPT1 residues 568 through 576.
“GSPT1 interaction with cereblon and CC-90009 is mediated by a b-hairpin degron loop formed by GSPT1 residues 568 through 576 (Figure 1J).”
Quote in the paperSubstantial claim - Findingown data
TSC1 or TSC2 loss partially blocked CC-90009-induced GSPT1 degradation.
“TSC1 or TSC2 loss partially blocked CC-90009-induced GSPT1 degradation (Figure 4D; supplemental Figure 5C).”
Quote in the paperSubstantial claim - Findingown data
The GSPT1 G575N mutation conferred complete resistance to CC-90009-induced degradation.
“As observed with CC-885, the GSPT1 G575N mutation conferred complete resistance to CC-90009-induced degradation (Figure 1K; supplemental Figure 2E-F).”
Quote in the paperSubstantial claim - Findingown data
Treatment with 100 nM CC-90009 reduced GSPT1 expression by >70% in 9 samples, 50% to 70% in 8 samples, and <50% in 6 samples among 23 primary AML samples treated in vitro.
“Treatment with 100 nM CC-90009 reduced GSPT1 expression by .70% in 9 samples, 50% to 70% in 8 samples, and ,50% in 6 samples (Figure 6A).”
Quote in the paperSubstantial claim - Findingown data
The majority of xenografts derived from patients with high risk features (secondary and relapsed AML, MRC cytogenetic risk, and abnormal cytogenetics) responded to CC-90009 as well as those derived from relatively more favorable cases.
“The majority of xenografts derived from patients with high risk features (secondary and relapsed AML, MRC cytogenetic risk, and abnormal cytogenetics) responded to CC-90009 as well as those derived from relatively more favorable (de novo, intermediate risk, and normal cytogenetics) cases (Figure 6E; Table 2).”
Quote in the paperSubstantial claim - Findingown data
The CRISPR screen uncovered candidate genes not previously reported to affect the response to other cereblon modulators, including modulators of RNA alternative splicing ILF2 and ILF3, suppressors of mTOR signaling TSC1 and TSC2, and key components of the integrated stress response pathway GCN1, GCN2, and ATF4.
“Additionally, we uncovered a few candidate genes that have not been previously reported to affect the response to other cereblon modulators.These include modulators of RNA alternative splicing including ILF2 and ILF3, suppressors of mTOR signaling including TSC1 and TSC2, and key components of the integrated stress response pathway including GCN1(GCN1L1), GCN2(EIF2AK4), and ATF4 (Figure 2C,F).”
Quote in the paperSubstantial claim - Findingown data
Persistent ISR activation by CC-90009 induces apoptosis.
“Our findings that persistent ISR activation by CC-90009 induces apoptosis substantiate the concept that the ISR wired into LSC can be modulated between prosurvival and prodeath, thereby providing a novel therapeutic approach to eradicate disease-driving LSC.”
Quote in the paperSubstantial claim - Findingown data
CC-90009 is a GSPT1-selective cereblon modulator.
“CC-90009, a GSPT1-selective cereblon modulator, induces cereblon-and GSPT1-dependent anti-AML activity.”
Quote in the paperSubstantial claim - Findingown data
In serial limiting dilution assays, a representative sample (AML3) showed a ninefold decrease in LSC frequency following CC-90009 treatment.
“A representative sample (AML3) is shown in Figure 7D (left), which showed a ninefold decrease in LSC frequency following CC-90009 treatment.”
Quote in the paperSubstantial claim - Findingown data
CC-90009 had a lesser inhibitory effect on normal cord blood CD34+ primitive cells in the xenograft than on AML CD34+ cells.
“In contrast, CC-90009 had lesser inhibitory effect on normal cord blood CD34 1 primitive cells in the xenograft than AML CD34 1 cells (supplemental Figure 7E).”
Quote in the paperSubstantial claim- Rests on an assumption: Normal PBMCs, THLE-2 cells, and cord blood CD34+ cells represent normal tissues for assessing CC-90009 toxicity.
- Findingown data
GSPT1 interaction with cereblon is mediated by a β-hairpin loop.
“GSPT1 interaction with cereblon is mediated by a b-hairpin loop.”
Quote in the paperSubstantial claim - Findingown data
CC-90009 induces cereblon- and GSPT1-dependent anti-AML activity.
“CC-90009, a GSPT1-selective cereblon modulator, induces cereblon-and GSPT1-dependent anti-AML activity.”
Quote in the paperSubstantial claim - Findingown data
CC-90009 has an antiproliferative effect in AML cell lines.
“The antiproliferative effect of CC-90009 in AML cell lines.”
Quote in the paperSubstantial claim - Findingown data
Among patient samples, there is variability in the degree of apoptosis, induction of differentiation, and retention of primitive CD34+ cells following CC-90009 treatment.
“We observed variability among samples in the degree of apoptosis and induction of differentiation and retention of primitive CD34 1 cells following treatment.”
Quote in the paperNot a substantial claim - Findingown data
The crystal structure of GSPT1 in complex with cereblon, DDB1, and CC-90009 was determined.
“Crystal structure of GSPT1 in complex with cereblon, DDB1 and CC-90009.”
Quote in the paperSubstantial claim - Findingown data
Among 6 responders and 6 partial responders tested, 3 samples demonstrated a statistically significant decrease in LSC frequency following CC-90009 treatment.
“Among the 6 responders and 6 partial responders tested, 3 samples demonstrated a statistically significant decrease in LSC frequency following CC-90009 treatment (Figure 7D, right).”
Quote in the paperSubstantial claim - Findingown data
CC-90009 treatment reduces leukemic engraftment in AML xenograft models.
“CC-90009 treatment reduces leukemic engraftment in AML xenograft models.”
Quote in the paperSubstantial claim - Findingown data
Loss of TSC1 or TSC2 attenuates the response to CC-90009.
“Loss of TSC1 or TSC2 attenuates the response to CC-90009.”
Quote in the paperSubstantial claim - Findingown data
ILF3 knockout in U937 cells significantly up- or downregulates 791 genes at the gene level (FDR < 0.05).
“At the gene level, 791 genes were found to be significantly (FDR ,0.05) up-or downregulated with ILF3 knockout.”
Quote in the paperSubstantial claim - Findingown data
CC-90009 treatment causes relative GSPT1 degradation in the right femur and bone marrow of NOD.SCID mice engrafted with AML.
“Relative GSPT1 degradation to controls in the RF and BM of NOD.SCID mice engrafted with AML and treated with CC-90009 (n 5 2-4 mice per treatment group).”
Quote in the paperSubstantial claim - Findingown data
Genes and pathways modulating the response to CC-90009 were identified via a CRISPR/Cas9 screen.
“Identification of genes and pathways modulating the response to CC-90009 via CRIPSR/Cas9 screen.”
Quote in the paperSubstantial claim - Findingown data
An exon annotating to the truncated transcript CRBN.213 (exon bin no.13) is significantly elevated (FDR < 0.02) with ILF3 knockout relative to NT controls.
“An exon, which annotates to the truncated transcript, CRBN.213 (exon bin no.13), is significantly elevated (FDR, 0.02) with ILF3 knockout relative to NT controls.”
Quote in the paperNot a substantial claim - Findingown data
CC-90009 activates the GCN2-mediated integrated stress response and subsequent apoptosis in AML.
“CC-90009 activates the GCN2-mediated integrated stress response and subsequent apoptosis in AML.”
Quote in the paperSubstantial claim - Findingown data
ILF3 knockout causes significant differential splicing of individual CRBN exons.
“DEU analysis revealed significant differential splicing of individual CRBN exons (red bars) with knockout of ILF3.”
Quote in the paperNot a substantial claim - Findingown data
The extent of GSPT1 reduction by CC-90009 varies among AML patient samples, with categories of >70%, 50-70%, and <50% reduction at 100 nM.
“Lines in black, cyan, and red represent samples with .70%,50% to 70%, and ,50% GSPT1 reduction, respectively, at the 100-nM treatment dose.”
Quote in the paperNot a substantial claim - Findingown data
ILF3 knockout in U937 cells causes differential splicing in 967 unique genes (FDR < 0.05).
“Evidence of differential splicing was observed in a total of 967 unique genes by up-and/or downregulated exon usage with ILF3 knockout in U937 cells, reaching a corrected significance level (FDR) ,0.05.”
Quote in the paperSubstantial claim - Findingown data
CC-90009 targets self-renewal LSCs.
“Self-renewal LSCs are targeted by CC-90009.”
Quote in the paperSubstantial claim- Rests on an assumption: LSC frequency measured by limiting dilution secondary transplantation in mice reflects the disease-driving LSC population in patients.
- Findingown data
Exons downstream of the CRBN.213 isoform are significantly underrepresented (FDR < 0.05; exon bin no.14) in ILF3 knockout cells relative to parental.
“Conversely, exons downstream of this isoform are significantly underrepresented (FDR, 0.05; exon bin no.14) in the ILF3 knockout cells relative to parental.”
Quote in the paperNot a substantial claim - Findingown data
CC-90009 reduces LSC numbers in the primary mouse bone marrow compared with vehicle control.
“Relative reduction in LSC numbers in mice treated with CC-90009 compared with vehicle control.”
Quote in the paperSubstantial claim- Rests on an assumption: LSC frequency measured by limiting dilution secondary transplantation in mice reflects the disease-driving LSC population in patients.
- Findingown data
The ILF2 and ILF3 complex regulates CRBN splicing and CC-90009 response.
“Regulation of CRBN splicing and CC-90009 response by the ILF2 and ILF3 complex.”
Quote in the paperSubstantial claim - Interpretationreasoning
CC-90009 activity is mediated by multiple layers of signaling networks and pathways within AML blasts and LSCs.
“Collectively, CC-90009 activity is mediated by multiple layers of signaling networks and pathways within AML blasts and LSCs, whose elucidation gives insight into further assessment of CC-90009s clinical utility.”
Quote in the paperSubstantial claim - Interpretationown data
CC-90009 specifically recruits GSPT1 to cereblon for ubiquitination and degradation.
“These data suggest that CC-90009 specifically recruits GSPT1 to cereblon for ubiquitination and degradation.”
Quote in the paperSubstantial claim - Interpretationown data
ISR activation following GSPT1 degradation at least partially modulates the anti-AML activity of CC-90009.
“Collectively, these findings suggest that the ISR activation following GSPT1 degradation at least partially modulates the anti-AML activity of CC-90009.”
Quote in the paperSubstantial claim - Interpretationown data
Activation of the mTORC1 signaling attenuates the degradation of GSPT1, leading to diminished CC-90009 response.
“Cotreatment with everolimus, an mTORC1 inhibitor, restored the CC-90009-induced degradation and growth inhibition (supplemental Figure 5D-E), suggesting that activation of the mTORC1 signaling attenuates the degradation of GSPT1, leading to diminished CC-90009 response.”
Quote in the paperSubstantial claim - Interpretationown data
CC-90009 has potent growth inhibitory effects on AML cells from patients with adverse prognostic features.
“Together, these data indicate that CC-90009 has potent growth inhibitory effects on AML cells from patients with adverse prognostic features.”
Quote in the paperSubstantial claim - Premisecitation
Therapy resistance and disease relapse in AML are tied to LSC properties including self-renewal and quiescence.
“Therapy resistance and disease relapse in AML are tied to LSC properties including self-renewal and quiescence.[51][52][53][54]”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [51][52][53][54]
Not checked in the free run.
- Interpretationown data
The ISR wired into LSC can be modulated between prosurvival and prodeath.
“Our findings that persistent ISR activation by CC-90009 induces apoptosis substantiate the concept that the ISR wired into LSC can be modulated between prosurvival and prodeath, thereby providing a novel therapeutic approach to eradicate disease-driving LSC.”
Quote in the paperSubstantial claim - Premisecitation
LSCs possess a distinct pro-survival integrated stress response (ISR) that mirrors that of normal hematopoietic stem cells.
“Our recent studies have shown that LSCs possess a distinct pro-survival ISR 50 that mirrors that of normal hematopoietic stem cells.55,56”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [55] van Galen, 2018, Integrated stress response activity marks stem cells in normal hematopoiesis and leukemia, Cell Rep source
Not checked in the free run.
- cites [56] van Galen, 2014, The unfolded protein response governs integrity of the haematopoietic stem-cell pool during stress, Nature source
Not checked in the free run.
- Premisecitation
In both hematopoietic stem cells and LSCs, specific translation dynamics lead to activation of the ISR.
“In both hematopoietic stem cell and LSC, specific translation dynamics lead to activation of the ISR.55”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [55] van Galen, 2018, Integrated stress response activity marks stem cells in normal hematopoiesis and leukemia, Cell Rep source
Not checked in the free run.
- Interpretationown data
Activity of CC-90009 across a spectrum of high-risk AML samples gives some confidence that it will target intrasample genetic diversity.
“However, that we observed activity across a spectrum of high-risk samples gives some confidence that it will target intrasample genetic diversity.”
Quote in the paperSubstantial claim - Interpretationown data
CC-90009 displayed marked activity in AML xenograft assays across a wide spectrum of AML samples, including refractory/relapsed cases and those with adverse risk features who are at high risk of relapse.
“We show that CC-90009 displayed marked activity in AML xenograft assays across a wide spectrum of AML samples, including refractory/relapsed cases and those with adverse risk features who are at high risk of relapse.”
Quote in the paperSubstantial claim- Rests on an assumption: Effective treatment options for patients with poor-risk cytogenetic features or relapsed/refractory AML are still needed.
- Interpretationown data
Disease-driving LSC can be eradicated in a subset of cases.
“Importantly, disease-driving LSC can be eradicated in a subset of cases.”
Quote in the paperSubstantial claim - Interpretationown data
Modulating the ISR in LSC provides a novel therapeutic approach to eradicate disease-driving LSC.
“Our findings that persistent ISR activation by CC-90009 induces apoptosis substantiate the concept that the ISR wired into LSC can be modulated between prosurvival and prodeath, thereby providing a novel therapeutic approach to eradicate disease-driving LSC.”
Quote in the paperSubstantial claim
- May combine two claims. 26
- The quote only partly states this claim. 1
- Classified as probably not a substantial claim. 4
May combine two claims.
Findingown dataCC-90009 demonstrated potent antiproliferative activity in 10 of 11 AML cell lines, with much less effect on the cell viability of PBMCs and THLE-2.
“We identified a novel CELMoD agent, CC-90009, which demonstrated potent antiproliferative activity in 10 of 11 cell lines (Figure 1A-B; supplemental Figure 1A), with much less effect on the cell viability of PBMCs and THLE-2.”
Quote in the paperSubstantial claim- Rests on an assumption: Normal PBMCs, THLE-2 cells, and cord blood CD34+ cells represent normal tissues for assessing CC-90009 toxicity.
May combine two claims.
Findingown dataDepletion of GSPT1 by CC-90009 rapidly induces AML apoptosis, reducing leukemia engraftment and LSCs in primary patient xenografting of 35 independent AML samples, including those with adverse risk features.
“Depletion of GSPT1 by CC-90009 rapidly induces acute myeloid leukemia (AML) apoptosis, reducing leukemia engraftment and leukemia stem cells (LSCs) in large-scale primary patient xenografting of 35 independent AML samples, including those with adverse risk features.”
Quote in the paperSubstantial claim- Rests on an assumption: Effective treatment options for patients with poor-risk cytogenetic features or relapsed/refractory AML are still needed.
May combine two claims.
Findingown dataCC-90009 selectively degrades GSPT1, resulting in acute AML apoptosis and elimination of disease-driving LSCs.
“CC-90009 selectively degrades GSPT1, resulting in acute AML apoptosis and elimination of diseasedriving LSCs.”
Quote in the paperSubstantial claim- Rests on an assumption: Effective treatment options for patients with poor-risk cytogenetic features or relapsed/refractory AML are still needed.
May combine two claims.
Findingown dataILF3 knockout reduced the mRNA level of CRBN-201 and CRBN-203 and increased the level of splicing variant CRBN-213, which is composed of exons 1 through 4 and a cryptic exon 5 containing a premature stop codon.
“ILF3 knockout reduced the mRNA level of CRBN-201 and CRBN-203 and increased the level of splicing variant CRBN-213, which is composed of exons 1 through 4 and a cryptic exon 5 containing a premature stop codon (Figure 3F; supplemental Figure 4F).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataRapid and highly efficient loss of viable leukemic cells was detected in 8 of 9 patient samples at 48 hours posttreatment with CC-90009, and nearly all leukemic cells were eliminated within 96 hours.
“Rapid and highly efficient loss of viable leukemic cells was detected in 8 of 9 patient samples at 48 hours posttreatment with CC-90009 (Figure 1C), and nearly all leukemic cells were eliminated within 96 hours (supplemental Figure 1E).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataCC-90009 treatment triggered rapid phosphorylation of eIF2α; accumulation of ATF4 and its transcriptional targets DDIT4, CHOP, and ATF3; and subsequent induction of apoptosis.
“Indeed, CC-90009 treatment triggered the rapid phosphorylation of eIF2a; accumulation of ATF4 and its transcriptional targets DDIT4, CHOP, and ATF3; and subsequent induction of apoptosis (Figure 5E; supplemental Figure 6H).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataCC-90009 promoted the binding of cereblon to GSPT1 but not IKZF1, whereas lenalidomide exhibited binding selectivity toward IKZF1 over GSPT1.
“Moreover, CC-90009 promoted the binding of cereblon to GSPT1 but not IKZF1 when added directly into the binding assays performed with cell extracts, whereas lenalidomide exhibited binding selectivity toward IKZF1 over GSPT1 (supplemental Figure 2A).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataILF3 loss drastically reduced cereblon expression, and hence CC-90009-induced GSPT1 degradation and growth inhibition.
“ILF3 loss drastically reduced cereblon expression, and hence CC-90009induced GSPT1 degradation and growth inhibition (Figure 3B,D; supplemental Figure 4C).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataImmunoblotting confirmed the specific degradation of GSPT1 but not other known CC-885 neosubstrates including IKZF1, HBS1L, and CK1a.
“immunoblotting confirmed the specific degradation of GSPT1 but not other known CC-885 neosubstrates including IKZF1, HBS1L, and CK1a (Figure 1F).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataCC-90009 treatment led to cell growth arrest and significantly affected the sgRNA distribution as compared with DMSO control in a genome-wide CRISPR screen.
“As expected, CC-90009 treatment led to cell growth arrest and significantly affected the sgRNA distribution as compared with DMSO control (Figure 2B; supplemental Figure 3A).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataGCN2 knockout inhibited eIF2α phosphorylation, induction of ATF4 and its target gene DDIT4, and caspase-3 cleavage in U937 cells treated with CC-90009.
“GCN2 knockout inhibited eIF2a phosphorylation, induction of ATF4 and its target gene DDIT4, and caspase-3 cleavage in U937 cells treated with CC-90009 (Figure 5E-F).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataCC-90009-induced GSPT1 downregulation can be blocked by proteasomal inhibition with bortezomib, or inactivation of the CRL4 CRBN complex with MLN4924 or CRBN knockout.
“The CC-90009-induced GSPT1 downregulation can be blocked by proteasomal inhibition with bortezomib, or inactivation of the CRL4 CRBN complex with MLN4924 or CRBN knockout (Figure 1F-G; supplemental Figure 1G-H).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataCC-90009 treatment reduced GSPT1 protein abundance with minimal effect on the rest of the proteome in KG-1 AML cells.
“CC-90009 treatment reduced the GSPT1 protein abundance with minimal effect on the rest of the proteome (Figure 1E), and immunoblotting confirmed the specific degradation of GSPT1 but not other known CC-885 neosubstrates including IKZF1, HBS1L, and CK1a (Figure 1F).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataCC-90009 resistance in OCI-AML3 is associated with insufficient GSPT1 degradation, and RNA interference-mediated partial GSPT1 knockdown restored CC-90009 activity.
“CC-90009 resistance in OCI-AML3 is associated with insufficient GSPT1 degradation, and RNA interference-mediated partial GSPT1 knockdown restored CC-90009 activity (supplemental Figure 1D).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataGSPT1 degradation activates the GCN1/GCN2/eIF2α/ATF4 axis of the ISR, with concomitant induction of acute apoptosis in AML.
“GSPT1 degradation activates the GCN1/GCN2/eIF2a/ATF4 axis of the ISR, with concomitant induction of acute apoptosis in AML.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown datamTORC1 hyperactivation owing to loss of TSC1 or TSC2 significantly blocked CC-90009-induced GSPT1 recruitment to cereblon, and hence diminished GSPT1 degradation and CC-90009 sensitivity in AML.
“We showed that mTORC1 hyperactivation owing to loss of TSC1 or TSC2 significantly blocked the CC-90009-induced GSPT1 recruitment to cereblon, and hence diminished GSPT1 degradation and CC-90009 sensitivity in AML.”
Quote in the paperSubstantial claimThe quote only partly states this claim.
Findingown data78 genes were significantly enriched by CC-90009 treatment (log2 FC > 2 and FDR < 0.05).
“Scatter plot of 78 genes significantly enriched by CC-90009 (log 2 FC .2 and FDR ,0.05).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataCC-90009 reduces leukemic engraftment in mice transplanted with de novo or secondary/relapsed AML, normal or abnormal cytogenetics, MRC adverse or intermediate risk group, and high or low LSC17 scores.
“Relative reduction in leukemic engraftment in mice treated with CC-90009 compared with controls, and transplanted with de novo or secondary or relapsed AML, normal or abnormal cytogenetics, MRC adverse or intermediate risk group, and high or low LS17 scores.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataCC-90009 treatment reduces GSPT1 in AML patient samples, with reduction categories at 100 nM.
“Lines in black, cyan, and red represent samples with .70%,50% to 70%, and ,50% GSPT1 reduction, respectively, at the 100-nM treatment dose.”
Quote in the paperSubstantial claimMay combine two claims.
Interpretationown dataGSPT1 stabilization completely inhibited the response to CC-90009, ruling out the participation of other substrates in the anti-AML effect of CC-90009.
“GSPT1 stabilization completely inhibited the response to CC-90009 (Figure 1L; supplemental Figure 2E-F), ruling out the participation of other substrates in the anti-AML effect of CC-90009.”
Quote in the paperSubstantial claimMay combine two claims.
Interpretationown dataGSPT1 degradation is both necessary and sufficient to account for the anti-AML activity of CC-90009.
“Thus, GSPT1 degradation is both necessary and sufficient to account for the anti-AML activity of CC-90009.”
Quote in the paperSubstantial claimMay combine two claims.
Interpretationown dataOverall, CC-90009 can target LSCs in the AML xenograft model, albeit with heterogeneous responses among AML cases.
“Overall, these data indicate that CC-90009 can target LSCs in the AML xenograft model, albeit with heterogeneous responses among AML cases.”
Quote in the paperSubstantial claimClassified as probably not a substantial claim. May combine two claims.
InterpretationreasoningSelective degradation of just the intended target optimizes the therapeutic index and overcomes toxicities associated with earlier, more promiscuous, cereblon modulators and provides a roadmap for the design of next-generation CELMoD agents.
“Beyond CC-90009, selective degradation of just the intended target optimizes the therapeutic index and overcomes toxicities associated with earlier, more promiscuous, cereblon modulators and provides a roadmap for the design of the next-generation CELMoD agents.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
InterpretationreasoningDifferences in response among patient samples may be related to distinct GSPT1 levels that exist between patients or between LSC subclones within individual patients.
“These differences in response among patient samples may be related to distinct GSPT1 levels that exist between patients or even between LSC subclones within individual patients.”
Quote in the paperNot a substantial claimMay combine two claims.
InterpretationreasoningIn the context of dysregulated protein translation termination, the GCN2-mediated ISR upon GSPT1 degradation promotes acute apoptotic cell death in AML cell lines and patient blasts with minimal effect on normal PBMC, THLEs, or T-lymphocytes, indicative of an exclusive vulnerability to GSPT1 loss in AML.
“In the context of dysregulated protein translation termination, the GCN2-mediated ISR upon GSPT1 degradation promotes acute apoptotic cell death in AML cell lines and patient blasts with minimal effect on normal PBMC, THLEs, or T-lymphocytes indicative of an exclusive vulnerability to GSPT1 loss in AML.”
Quote in the paperSubstantial claim- Rests on an assumption: Normal PBMCs, THLE-2 cells, and cord blood CD34+ cells represent normal tissues for assessing CC-90009 toxicity.
Probably not a substantial claim: may not pass S2 (checkable).
InterpretationreasoningEffective targeting of leukemic blasts and LSCs in AML samples with poorer prognosis supports further development of CC-90009 in clinical trials as a novel agent for patients with refractory/relapsed AML.
“Such effective targeting of leukemic blasts and LSCs in AML samples with poorer prognosis supports further development of CC-90009 in clinical trials as a novel agent for patients with refractory/relapsed AML.”
Quote in the paperNot a substantial claim- Rests on an assumption: Preclinical activity of CC-90009 against AML blasts and LSCs in patient samples and xenograft models predicts clinical efficacy in patients with refractory/relapsed AML.
May combine two claims.
Interpretationown dataAblation of DDIT4 significantly reduced the response to CC-90009 and largely mimicked the gene knockout effect of GCN1, GCN2, and ATF4, strongly suggesting that the GCN2-mediated anti-AML activity of CC-90009 is mainly exerted by REDD1 among all the target genes transactivated by ATF4.
“Ablation of DDIT4(REDD1) significantly reduced the response to CC-90009 and largely mimicked the gene knockout effect of GCN1, GCN2, and ATF4, strongly suggesting that the GCN2-mediated anti-AML activity of CC-90009 is mainly exerted by REDD1 among all the target genes transactivated by ATF4.”
Quote in the paperSubstantial claimMay combine two claims.
Interpretationown dataThe alternative splicing of CRBN mRNA transcripts controlled by the ILF2/ILF3 complex was detected in all tested cell lines regardless of cell type or tissue of origin, suggesting that ILF2 or ILF3 loss should attenuate the response to all cereblon modulating agents.
“For example, the alternative splicing of CRBN mRNA transcripts controlled by the ILF2/ ILF3 complex was detected in all tested cell lines regardless of cell type or tissue of origin (data not shown), suggesting that ILF2 or ILF3 loss should attenuate the response to all cereblon modulating agents.”
Quote in the paperSubstantial claimMay combine two claims.
Study design and conductown dataMultiple sgRNAs targeting each top-ranked gene were significantly enriched by CC-90009, strongly supporting the on-target gene knockout effect.
“Note that in panels E and F, multiple sgRNAs targeting each of these top-ranked genes were significantly enriched by CC-90009, strongly supporting the on-target gene knockout effect.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductnone givenResults in all figure panels are representative of 3 biological replicates.
“Result shown in all figure panels is representative of 3 biological replicates.”
Quote in the paperNot a substantial claim
The paper relies on this without support.
Effective treatment options for patients with poor-risk cytogenetic features or relapsed/refractory AML are still needed.
“effective options for patients with poor risk cytogenetic features, or relapsed and refractory disease are still needed.”
The paper relies on this without support.
Normal PBMCs, THLE-2 cells, and cord blood CD34+ cells represent normal tissues for assessing CC-90009 toxicity.
“with much less effect on the cell viability of PBMCs and THLE-2.”
“CC-90009 had lesser inhibitory effect on normal cord blood CD34 1 primitive cells in the xenograft than AML CD34 1 cells”
The paper relies on this without support.
Preclinical activity of CC-90009 against AML blasts and LSCs in patient samples and xenograft models predicts clinical efficacy in patients with refractory/relapsed AML.
“Such effective targeting of leukemic blasts and LSCs in AML samples with poorer prognosis supports further development of CC-90009 in clinical trials as a novel agent for patients with refractory/relapsed AML.”
The paper relies on this without support.
LSC frequency measured by limiting dilution secondary transplantation in mice reflects the disease-driving LSC population in patients.
“LSC frequency in CC-90009-or control-treated mice determined by secondary transplantation at limiting doses for representative sample AML3 (left) and summary graph showing fold change in LSC frequency for all samples tested by limiting dilution analysis (right).”
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Several rationally optimized CELMoDs are now in clinical trials for both solid and haematological malignancies.
“Several of these rationally optimized celMoDs are now in clinical trials for both solid and haematological malignancies, demonstrating the potential for rational compound optimization”
From From serendipity to strategy: molecular glue degraders in cancer therapeutics (2025) · cites this paper as Surka et al. 2021
The Introduction names several novel CELMoDs developed to treat haematological malignancies, and the Discussion describes CC-90009 as a route to designing improved agents. Neither passage establishes that several are already in clinical trials or that those trials cover solid malignancies; the Discussion instead calls for further clinical development of CC-90009. (LLM, conf=0.83)
Experimental — accuracy not yet measuredFurther refinement of GSPT1-targeting compounds has resulted in three potent molecules: CC-90009, BTX-1188 and MRT-2359.
“For gSPt1 in particular, further refinement of these compounds has resulted in three potent gSPt1-targeting molecules: cc-90009, BtX-1188and MRt-2359(Surka et al. 2021).”
From From serendipity to strategy: molecular glue degraders in cancer therapeutics (2025) · cites this paper as Surka et al. 2021
The Introduction describes CC-90009 as a GSPT1-selective agent developed after CC-885, and the targeted-degradation section reports its GSPT1-directed activity. Our copy does not mention BTX-1188 or MRT-2359, so it does not support the claim that refinement resulted in all three named molecules. (LLM, conf=0.90)
Experimental — accuracy not yet measuredCustom CELMoDs targeting GSPT1 have demonstrated potential across multiple malignancies.
“custom celMoDs targeting gSPt1 have already demonstrated potential across multiple malignancies (Matyskiela et al. 2016;Surka et al. 2021)”
From From serendipity to strategy: molecular glue degraders in cancer therapeutics (2025) · cites this paper as Surka et al. 2021
The Introduction and Discussion identify CC-90009 as a GSPT1-selective CELMoD and report preclinical activity across a wide range of AML samples. That supports its potential in AML, but this paper does not demonstrate potential across multiple malignancies; its reported efficacy is confined to AML. No page numbers were available in our copy. (LLM, conf=0.88)
Experimental — accuracy not yet measuredThe discovery of CC-885 as a CRBN-dependent GSPT1 degrader was initially motivated by cancer cell line profiling studies.
“The discovery of CC-885 as a CRBN-dependent GSPT1 degrader53 was likewise initially motivated by cancer cell line profiling studies, prompting the development of the clinical candidate CC-90009.168,169”
From Advancing Targeted Protein Degradation via Multiomics Profiling and Artificial Intelligence (2023) · cites this paper as [168]
Target identification and elucidation of the mechanism of action of degraders via functional genomics was initially mostly driven by pooled CRISPR/Cas9 screens with a positive selection readout based on cellular fitness.
“Target identification and elucidation of the mechanism of action of degraders via functional genomics was initially mostly driven by pooled CRISPR/Cas9 screens with a positive selection readout based on cellular fitness (“drug resistance screens”).168,232,233”
From Advancing Targeted Protein Degradation via Multiomics Profiling and Artificial Intelligence (2023) · cites this paper as [168]
Several functional genomics campaigns have helped map how the repertoire of CRLs and their regulators shape degrader efficacy, outlining putative resistance mechanisms.
“Several functional genomics campaigns in recent years have helped map how the repertoire of CLRs and their regulators shape degrader efficacy, thus also outlining putative resistance mechanisms.141-151”
From Chasing molecular glue degraders: screening approaches (2022) · cites this paper as [149]
Molecular glues constitute another important therapeutic class of targeted protein degraders.
“Molecular glues, based on the serendipitous discovery that thalidomide and its analogues act as degrader molecules, constitute another important therapeutic class1–8.”
From PROTAC targeted protein degraders: the past is prologue (2022) · cites this paper as [1]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
Each contradiction between two passages listed here was confirmed by an independent check.
Partial responder falls outside the stated reduction range at both sites
MinorThe text says partial responders had 20% to 60% relative reduction. Table 1 classifies patient 24 as a partial responder but reports 9% reduction in RF and 97% in BM-neither is in that range.
“Eight "partial responders" had a less robust response to CC-90009, with 20% to 60% relative reduction.”
“24 LSC17 hi 6.2 7.0 NS 9 1.7 48.4 ,.05 97 PR”
Two different counts of differentially expressed genes
MinorThe Results state that ILF3 loss affected expression of 645 genes, whereas the Figure 3 caption reports 791 significantly up- or downregulated genes at the gene level.
“ILF3 loss significantly affected the expression level of 645 genes”
“At the gene level, 791 genes were found to be significantly (FDR ,0.05) up-or downregulated with ILF3 knockout.”
Claim of significant reduction at both sites conflicts with Table 1
MinorThe Results describe significant reductions in both RF and BM for the 24 responders. Table 1 nevertheless labels the BM result for responder patient 8 as NS and the RF result for responder patient 18 as NS.
“In 24 samples, CC-90009 significantly reduced CD45 1 33 1 AML cells by 52% to 100% in injected femur (RF) and 62% to 99% in noninjected bones (BM), compared with vehicle-treated mice”
“18 LSC17 hi 24.2 91.3 NS 74 3.1 78.5 ,.01 96 R”
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HDAC pharmacological inhibition promotes cell death through the eIF2α kinases PKR and GCN2
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Flagged first, then by citations
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PROTAC targeted protein degraders: the past is prologue
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Molecular glue CELMoD compounds are regulators of cereblon conformation
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From Thalidomide to Rational Molecular Glue Design for Targeted Protein Degradation
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Self-citationFunctional E3 ligase hotspots and resistance mechanisms to small-molecule degraders
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Mining the CRBN target space redefines rules for molecular glue-induced neosubstrate recognition
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Design of a Cereblon construct for crystallographic and biophysical studies of protein degraders
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“Several of these rationally optimized celMoDs are now in clinical trials for both solid and haematological malignancies, demonstrating the potential for rational compound optimization (Nct05519085, Nct04975997, Nct05827016, Nct03891953) (Surka et al. 2021).”
Influential
- Authors
- Surka, C., Jin, L., Mbong, N., Lu, C.-C., Jang, I. S., Rychak, E., Mendy, D., Clayton, T., Tindall, E., Hsu, C., Fontanillo, C., Tran, E., Contreras, A., Ng, S. W. K., Matyskiela, M., Wang, K., Chamberlain, P., Cathers, B., Carmichael, J., Hansen, J., Wang, J. C. Y., Minden, M. D., Fan, J., Pierce, D. W., Pourdehnad, M., Rolfe, M., Lopez-Girona, A., Dick, J. E., & Lu, G.
- Affiliations
- Bristol-Myers Squibb (United States) (US)
- University Health Network (CA)
- Bristol-Myers Squibb, San Diego, CA;
- Corresponding author
- Surka, Christine
- Jin, Liqing
- ORCID
- Venue
- Blood
- Publisher
- American Society of Hematology
- Published
- 2021-02-04
- Volume
- 137
- Issue
- 5
- Pages
- 661-677
- ISSN
- 0006-4971 (ISSN-L)
- 1528-0020
- PMC
- PMC8215192
- OpenAlex
- W3100577837
- Cited by
- 229
- References
- 58
- Citations by year
- 2026: 40 · 2025: 60 · 2024: 41 · 2023: 36 · 2022: 31 · 2021: 19 · 2020: 1 · 2014: 1
- FWCI
- 7.21
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Locations
- Blood (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- U.S. Department of Energy (-AC02-05CH11231, 05CH11231, DE AC02 05CH11231, GM124169, DE-AC02-)
- Bristol-Myers Squibb
- Government of Ontario
- International Development Research Centre
- National Institutes of Health (DE-AC02–05CH11231, 1s10od021832-01, P30-GM124169-01, GM124169)
- Office of Science (DEAC02–05CH11231, AC02-05CH11231, DE-AC02)
- Canadian Institutes of Health Research (DE-AC02-05CH11231, 154293, 89932)
- National Institute of General Medical Sciences (DE-AC02-05CH11231, GM124169-01, GM124169, P30GM124169)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Degradation and Inhibitors
- Health Sciences › Medicine › Hematology › Acute Myeloid Leukemia Research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Ubiquitin and proteasome pathways
- Keywords
- cereblon E3 ligase modulator, GSPT1, acute myeloid leukemia, leukemia stem cells, proteasomal degradation, mTOR signaling, integrated stress response, apoptosis, drug repurposing
- MeSH terms
- Acetamides, Animals, Humans, Models, Molecular, Neoplasm Proteins, Peptide Termination Factors, Piperidones, Protein Conformation, Protein Processing, Post-Translational, Stress, Physiological, Neoplastic Stem Cells, Leukemia, Myeloid, Acute, Mice, SCID, Mice, Inbred NOD, U937 Cells, Xenograft Model Antitumor Assays, Ubiquitin-Protein Ligases, Cell Line, Tumor, Proteasome Endopeptidase Complex, Adaptor Proteins, Signal Transducing, Nuclear Factor 90 Proteins, Mice, Nuclear Factor 45 Protein, Receptors, Interleukin-17, Isoindoles, Small Molecule Libraries, Ubiquitination, TOR Serine-Threonine Kinases, Molecular Targeted Therapy, Proteolysis, CRISPR-Cas Systems
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Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Claims read by deepseek-v4.1-flash under definition version 3 (extract-v3) on 2026-10-10.
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