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Ultrastructural evidence of microglial heterogeneity in Alzheimer’s disease amyloid pathology
Open accessAbstract
Alzheimer’s disease (AD) is the most common neurodegenerative disease, characterized by the deposition of extracellular fibrillar amyloid β (fΑβ) and the intracellular accumulation of neurofibrillary tangles. As AD progresses, Aβ drives a robust and prolonged inflammatory response via its recognition by microglia, the brain’s immune cells. Microglial reactivity to fAβ plaques may impair their normal surveillance duties, facilitating synaptic loss and neuronal death, as well as cognitive decline in AD. In the current study, we performed correlative light, transmission, and scanning electron microscopy to provide insights into microglial structural and functional heterogeneity. We analyzed microglial cell bodies and processes in areas containing fAβ plaques and neuronal dystrophy, dystrophy only, or appearing healthy, among the hippocampus CA1 of 14-month-old APPSwe-PS1Δe9 mice versus wild-type littermates. Our quantitative analysis revealed that microglial cell bodies in the AD model mice were larger and displayed ultrastructural signs of cellular stress, especially nearby plaques. Microglial cell bodies and processes were overall less phagocytic in AD model mice. However, they contained increased fibrillar materials and non-empty inclusions proximal to plaques. Microglial cell bodies and processes in AD model mice also displayed reduced association with extracellular space pockets that contained debris. In addition, microglial processes in healthy subregions of AD model mice encircled synaptic elements more often compared with plaque-associated processes. These observations in mice were qualitatively replicated in post-mortem hippocampal samples from two patients with AD (Braak stage 5). Together, our findings identify at the ultrastructural level distinct microglial transformations common to mouse and human in association with amyloid pathology.
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“In addition, in areas with limited plaque pathology, microglial processes encircled synaptic elements more often compared with plaque-associated processes [57].”
From Microglia specific deletion of miR-155 in Alzheimer’s disease mouse models reduces amyloid-β pathology but causes hyperexcitability and seizures (2023) · cites this paper as [57]
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“Previous studies have shown that cell bodies of microglia in AD model mice were larger and displayed ultrastructural signs of cellular stress, especially those nearby plaques and that these cells were overall less phagocytic [57].”
From Microglia specific deletion of miR-155 in Alzheimer’s disease mouse models reduces amyloid-β pathology but causes hyperexcitability and seizures (2023) · cites this paper as [57]
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Stephen, T. L., Cacciottolo, M., Balu, D., Morgan, T. E., LaDu, M. J., Finch, C. E., & Pike, C. J. (2019) · Acta Neuropathologica Communications · doi:10.1186/s40478-019-0729-z · Cited by 115
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“These data show that microglia contain synaptic protein in human brain with more ingestion in AD, more near plaques, and more in APOE4 carriers.”
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Self-citationA neurodegenerative cellular stress response linked to dark microglia and toxic lipid secretion
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“In addition, in our qualitative analysis, neuronal cell bodies were distinguished by their pale nuclei and pale cytoplasm, heterochromatin pattern, as well as innervation from axon terminals (65, 68).”
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“In line with these findings, previous studies from our group identified a microglial state, the dark microglia, which are found nearby fibrillar Aβ in middle-age, 14-month-old APP-PS1 mice [mouse model of AD with a Swedish mutation in the APP and a humanized presenilin (PSEN1)] [64, 65].”
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Afridi, R., Lee, W.-H., & Suk, K. (2020) · Frontiers in Cellular Neuroscience · doi:10.3389/fncel.2020.00246 · Cited by 64
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“Of note, brains of subjects with AD showed an intensified immune response in both post-mortem studies [33] as well as in vivo [34] and microglia displayed ultrastructural modifications when associated with Aβ [35].”
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“In addition, in areas with limited plaque pathology, microglial processes encircled synaptic elements more often compared with plaque-associated processes [57].”
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“These plaques caused neuronal dystrophy, and finally neuronal death (34) that is represented by the increased number of dark neurons in the AD group.”
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“neuron-microglia interaction remains unknown [17].”
BackgroundPhenomic Microglia Diversity as a Druggable Target in the Hippocampus in Neurodegenerative Diseases
Lana, D., Magni, G., Landucci, E., Wenk, G. L., Pellegrini-Giampietro, D. E., & Giovannini, M. G. (2023) · International Journal of Molecular Sciences · doi:10.3390/ijms241813668 · Cited by 20
Bobotis, B. C., Khakpour, M., Braniff, O., de Andrade, E. G., Gargus, M., Allen, M., Carrier, M., Baillargeon, J., Rangachari, M., & Tremblay, M.-È. (2025) · Journal of Neuroinflammation · doi:10.1186/s12974-025-03341-6 · Cited by 17
Self-citationDecoeur, F., Picard, K., St‐Pierre, M., Greenhalgh, A. D., Delpech, J.-C., Séré, A., Layé, S., Tremblay, M., & Nadjar, A. (2022) · Frontiers in Cellular Neuroscience · doi:10.3389/fncel.2022.802411 · Cited by 16
Self-citationMicroglial Reactivity Correlates with Presynaptic Loss Independent of β‐Amyloid and Tau
Lan, G., Chen, X., Yang, J., Sun, P., Cai, Y. Q., Li, A., Zhu, Y., Liu, Z., Ma, S., Guo, T., et al. (2024) · Annals of Neurology · doi:10.1002/ana.26885 · Cited by 19
“One postmortem study 49 demonstrated that microglial processes contained synaptic elements in the hippocampus of AD patients, and the amyloidosis mice experienced greater synaptic engulfment by microglia compared to wild-type mice.”
Tolédano, A., Rodríguez‐Casado, A., Álvarez, M., & Toledano‐Díaz, A. (2024) · Brain Sciences · doi:10.3390/brainsci14111101 · Cited by 19
Pumo, A., & Legeay, S. (2024) · Brain Research · doi:10.1016/j.brainres.2024.148817 · Cited by 14
“Additionally, other microglial subsets that emerge during disease progression have been observed, which differ from the originally described DAMs, including plaques associated microglia and dark microglia (Hashemiaghdam and Mroczek, 2020; Bisht et al., 2016; El Hajj et al., 2019).”
Liang, F., Sun, F., He, B., & Wang, J. (2022) · Neuroscience · doi:10.1016/j.neuroscience.2022.03.043 · Cited by 12
Toledano‐Díaz, A., Álvarez, M., & Tolédano, A. (2022) · Journal of Central Nervous System Disease · doi:10.1177/11795735221128703 · Cited by 11
“Many authors consider that microglial cells accumulate in areas more strongly associated with amyloid deposits, even infiltrating amyloid plaques, although they also appear in less severely affected areas.(198,199) In”
BackgroundPromising molecular targets for pharmacological therapy of neurodegenerative pathologies
Неганова, М. Е., Aleksandrova, Y. R., Nebogatikov, V. O., Klochkov, S. G., & Ustyugov, A. A. (2020) · Acta Naturae · doi:10.32607/actanaturae.10925 · Cited by 11
The Role of Glia in Addiction: Dopamine as a Modulator of Glial Responses in Addiction
Jiménez-González, A., Acevedo, C. G., Ochoa-Aguilar, A., & Chavarría, A. (2021) · Cellular and Molecular Neurobiology · doi:10.1007/s10571-021-01105-3 · Cited by 10
Vecchiarelli, H. A., Bisht, K., Sharma, K. P., Novak, S. W., Traetta, M. E., Garcia‐Segura, M. E., St‐Pierre, M., Savage, J. C., Willis, C. M., Picard, K., et al. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.10.15.618087 · Cited by 10
Self-citationUltrastructural features of psychological stress resilience in the brain: a microglial perspective
Ibáñez, F. G., VanderZwaag, J., Deslauriers, J., & Tremblay, M. (2024) · Open Biology · doi:10.1098/rsob.240079 · Cited by 11
Self-citationMicroglia heterogeneity during neuroinflammation and neurodegeneration in the mouse retina
Rao, B., Liu, X., Xiao, J., Wu, X., He, F., Yang, Q., Zhao, W., Lin, X., & Zhang, J. (2024) · Brain Structure and Function · doi:10.1007/s00429-024-02875-4 · Cited by 12
“This is in agreement with previous studies in the CNS (Bisht K et al. 2016; El Hajj H et al. 2019).”
InfluentialCell type specific isolation of primary astrocytes and microglia from adult mouse spinal cord
Ahn, J. J., Islam, Y., & Miller, R. H. (2022) · Journal of Neuroscience Methods · doi:10.1016/j.jneumeth.2022.109599 · Cited by 8
Shulyatnikova, T. V., Tumanskiy, V. A., & Hayden, M. R. (2022) · International Journal of Molecular Sciences · doi:10.3390/ijms232214455 · Cited by 8
“5 μm in diameter, enclosing heterogeneous contents by a single membrane [44].”
BackgroundInfluentialInvestigation of microglial diversity in a LRRK2 G2019S mouse model of Parkinson's disease
Iovino, L., VanderZwaag, J., Kaur, G., Khakpour, M., Giusti, V., Donadon, M., Chiavegato, A., Lopes, L. T., Greggio, E., Tremblay, M., et al. (2024) · Neurobiology of Disease · doi:10.1016/j.nbd.2024.106481 · Cited by 7
Self-citationSt‐Pierre, M., Šimončičová, E., Carrier, M., & Tremblay, M. (2022) · Methods in molecular biology · doi:10.1007/978-1-0716-2655-9_4 · Cited by 5
Self-citationMicroglial Drivers of Alzheimer's Disease Pathology: An Evolution of Diverse Participating States
Kuhn, M. K., & Proctor, E. A. (2024) · Proteins Structure Function and Bioinformatics · doi:10.1002/prot.26723 · Cited by 5
“…neurons from Aβ oligomers that contribute to synapse disruption and cognitive deficits [169, 170], as a consequence of their interaction with Aβ and Aβ plaques, microglia display impaired surveillance activity and dampened homeostatic functions [171] and promote the spread of Aβ in the brain [172].”
Lau, V. Z., VanderZwaag, J., Murray, C. J., & Tremblay, M. (2025) · Journal of Neurochemistry · doi:10.1111/jnc.70086 · Cited by 6
Self-citationEvolving insights into the identity and function of dark microglia
Flury, A. G., St‐Pierre, M., Ayata, P., & Tremblay, M. (2025) · Trends in Neurosciences · doi:10.1016/j.tins.2025.11.002 · Cited by 7
Self-citationFelice, E. D., Bobotis, B. C., Rigillo, G., Khakpour, M., de Andrade, E. G., Benatti, C., Vilella, A., Tascedda, F., Limatola, C., Tremblay, M., et al. (2024) · Brain Behavior and Immunity · doi:10.1016/j.bbi.2024.11.034 · Cited by 5
Self-citationSomodji, E. A., & Gowrishankar, S. (2026) · npj Dementia · doi:10.1038/s44400-026-00086-8 · Cited by 6
“Indeed, a study that examined the ultrastructure of organelles within the main body and processes of microglia, noted that there were more non-empty inclusions within phagocytic vesicles of processes versus the main body 103 .”
St‐Pierre, M., Carrier, M., Ibáñez, F. G., Šimončičová, E., Wallman, M., Vallières, L., Parent, M., & Tremblay, M. (2022) · Research Square · doi:10.21203/rs.3.rs-1751270/v1 · Cited by 4
Self-citationEmerging Techniques for the Study of Microglia: Visualization, Depletion and Fate MappingPreprint
Bobotis, B. C., Halvorson, T., Carrier, M., & Tremblay, M. (2023) · Preprints.org · doi:10.20944/preprints202308.2190.v1 · Cited by 3
Self-citationXie, D., Zheng, Q., Lv, J., Zhang, Q., Cui, Z., Huang, S., Yu, W., Chen, B., Que, W., Fu, S., et al. (2025) · Advanced Science · doi:10.1002/advs.202510270 · Cited by 3
How Many Alzheimer–Perusini’s Atypical Forms Do We Still Have to Discover?
Donato, L., Mordà, D., Scimone, C., Alibrandi, S., D’Angelo, R., & Sidoti, A. (2023) · Biomedicines · doi:10.3390/biomedicines11072035 · Cited by 3
Biphasic Role of Microglia in Healthy and Diseased Brain
Kumar, M., Arora, P., & Sandhir, R. (2022) · Springer eBooks · doi:10.1007/978-981-16-8313-8_18 · Cited by 2
Ibáñez, F. G., Halvorson, T., Sharma, K. P., McKee, C., Carrier, M., Picard, K., Vernoux, N., Bisht, K., Deslauriers, J., Lalowski, M. M., et al. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.08.28.555135 · Cited by 2
Self-citationda Silva‐Araújo, E. R., Manhães-de-Castro, R., Toscano, A. E., Gouveia, H. J. C. B., de Sá, M. R., Júnior, G. B. A., da Silva, A. N., & Hernández, E. P. (2025) · Progress in Biophysics and Molecular Biology · doi:10.1016/j.pbiomolbio.2025.12.006 · Cited by 1
Caveolin-1 Regulates Ultrastructural Alterations of Astrocytes in Chronic Cerebral Hypoperfusion
Wu, M., Zhang, X., Wang, D., Shu, X., Chen, D., Zhao, Y., Lv, Q., Li, Y., Huang, Z., Gao, J., et al. (2025) · Inflammation · doi:10.1007/s10753-025-02431-0 · Cited by 1
Investigation of microglial diversity in a mouse model of Parkinson’s disease pathologyPreprint
Iovino, L., VanderZwaag, J., Kaur, G., Khakpour, P., Giusti, V., Chiavegato, A., Lopes, L. T., Greggio, E., Tremblay, M., & Civiero, L. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.11.23.567809 · Cited by 1
Self-citationEtebar, F. (2023) · Queensland University of Technology · doi:10.5204/thesis.eprints.244774
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“ER /Golgi apparatus dilation, associated with cellular stress, was identified when the distance between cisternal membranes was greater than 100 nm [17,19].”
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Enlow, W., Bordeleau, M., Piret, J., Ibáñez, F. G., Uyar, O., Venable, M.-C., Goyette, N., Carbonneau, J., Tremblay, M., & Boivin, G. (2021) · Figshare · doi:10.6084/m9.figshare.15179567
Self-citationAloi, M. S., Prater, K. E., Sánchez, R. E. A., Beck, A. I., Pathan, J. L., Davidson, S., Wilson, A. M., Keene, C. D., de la Iglesia, H. O., Jayadev, S., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26573215
Metadata
- Authors
- El Hajj, H., Savage, J. C., Bisht, K., Parent, M., Vallières, L., Rivest, S., & Tremblay, M.-È.
- Affiliations
- Centre de recherche du CHU de Québec-Université Laval (CA)
- Université Laval (CA)
- Corresponding author
- Tremblay, Marie-Ève
- Venue
- Journal of Neuroinflammation
- Published
- 2019-04-16
- Volume
- 16
- Issue
- 1
- Pages
- 87-87
- ISSN
- 1742-2094 (ISSN-L)
- PMC
- PMC6469225
- OpenAlex
- W2946033659
- Cited by
- 119
- References
- 95
- Citations by year
- 2026: 7 · 2025: 11 · 2024: 23 · 2023: 16 · 2022: 22 · 2021: 18 · 2020: 18 · 2019: 4
- FWCI
- 6.82
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- Locations
- Journal of Neuroinflammation (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion)
- Funders
- Fonds de recherche en santé du Québec
- Lebanese Ministry of Education and Higher Education
- Fondation du CHU de Québec
- The Banting Research Foundation
- The Scottish Rite Charitable Foundation of Canada
- NEURON-ERANET
- Topics
- Life Sciences › Neuroscience › Neurology › Neuroinflammation and Neurodegeneration Mechanisms
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Alzheimer's disease research and treatments
- Life Sciences › Neuroscience › Neurology › Neurological Disease Mechanisms and Treatments
- Keywords
- Alzheimer's disease, microglial heterogeneity, amyloid plaques, amyloid fibrils, APPswe/PS1ΔE9 mice, hippocampal CA1, microglial phagocytosis, neuronal dystrophy, Braak stages, neuroinflammation
- MeSH terms
- Aged, Aged, 80 and over, Alzheimer Disease, Animals, Hippocampus, Humans, Amyloid beta-Peptides, Microglia, Mice
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