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Bile salt biotransformations by human intestinal bacteria
Open accessAbstract
Secondary bile acids, produced solely by intestinal bacteria, can accumulate to high levels in the enterohepatic circulation of some individuals and may contribute to the pathogenesis of colon cancer, gallstones, and other gastrointestinal (GI) diseases. Bile salt hydrolysis and hydroxy group dehydrogenation reactions are carried out by a broad spectrum of intestinal anaerobic bacteria, whereas bile acid 7-dehydroxylation appears restricted to a limited number of intestinal anaerobes representing a small fraction of the total colonic flora. Microbial enzymes modifying bile salts differ between species with respect to pH optima, enzyme kinetics, substrate specificity, cellular location, and possibly physiological function. Crystallization, site-directed mutagenesis, and comparisons of protein secondary structure have provided insight into the mechanisms of several bile acid-biotransforming enzymatic reactions. Molecular cloning of genes encoding bile salt-modifying enzymes has facilitated the understanding of the genetic organization of these pathways and is a means of developing probes for the detection of bile salt-modifying bacteria. The potential exists for altering the bile acid pool by targeting key enzymes in the 7alpha/beta-dehydroxylation pathway through the development of pharmaceuticals or sequestering bile acids biologically in probiotic bacteria, which may result in their effective removal from the host after excretion.
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“Primary conjugated BAs synthesized in the liver, such as the tauro- and glycoconjugates of cholic acid (TCA, GCA), are deconjugated by BSHs to generate cholic acid (CA)”
From Bile salt hydrolases shape the bile acid landscape and restrict Clostridioides difficile growth in the murine gut (2023) · cites this paper as [11]
In the citing paper
“This vanguard reaction acts as a ‘gatekeeper’ for subsequent BA transformations that turn primary BAs into secondary BAs”
From Bile salt hydrolases shape the bile acid landscape and restrict Clostridioides difficile growth in the murine gut (2023) · cites this paper as [11]
In the citing paper
“There is an intensive bidirectional interaction between BAs and intestinal microbiota.51”
From Novel therapeutic targets for cholestatic and fatty liver disease (2022) · cites this paper as [51]
In the citing paper
“Primary bile acids are converted to secondary bile acids by the local microbiota, partly in the small intestine and predominantly in the colon. This involves multiple steps and typically begins with the initial deconjugation of glycine or taurine, followed by dehydroxylation (Ridlon et al., 2006).”
From Understanding the Holobiont: How Microbial Metabolites Affect Human Health and Shape the Immune System (2017) · cites this paper as Ridlon et al., 2006
In the citing paper
“Bile acid activity of commensal bacteria is involved in a complex interplay with host hepatic enzymes, and together they promote digestion and absorption of dietary lipids.42”
From The Gut Microbiome Contributes to a Substantial Proportion of the Variation in Blood Lipids (2015) · cites this paper as [42]
Citations
Cites
Diversity of the Human Intestinal Microbial Flora
Eckburg, P. B., Bik, E. M., Bernstein, C. N., Purdom, E., Dethlefsen, L., Sargent, M., Gill, S. R., Nelson, K. E., & Relman, D. A. (2005) · Science · doi:10.1126/science.1110591 · Cited by 7,913
Prokaryotes: The unseen majority
Whitman, W. B., Coleman, D. C., & Wiebe, W. J. (1998) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.95.12.6578 · Cited by 4,871 · cited 1×
“Bacterial density in the human colon is among the highest found in nature, approaching 10(12) bacteria/ gram wet weight feces (2, 3).”
BackgroundMICROBIAL ECOLOGY OF THE GASTROINTESTINAL TRACT
Savage, D. C. (1977) · Annual Review of Microbiology · doi:10.1146/annurev.mi.31.100177.000543 · Cited by 2,436
The interaction between bacteria and bile
Begley, M., Gahan, C. G. M., & Hill, C. (2004) · FEMS Microbiology Reviews · doi:10.1016/j.femsre.2004.09.003 · Cited by 1,776
Comparative Genomics of Listeria Species
Glaser, P., Frangeul, L., Buchrieser, C., Rusniok, C., Amend, A., Baquero, F., Berche, P., Blöcker, H., Brandt, P., Chakraborty, T., et al. (2001) · Science · doi:10.1126/science.1063447 · Cited by 1,505
Vitamin D Receptor As an Intestinal Bile Acid Sensor
Makishima, M., Lu, T. T., Xie, W., Whitfield, G. K., Domoto, H., Evans, R. M., Haussler, M. R., & Mangelsdorf, D. J. (2002) · Science · doi:10.1126/science.1070477 · Cited by 1,176
The Continuing Importance of Bile Acids in Liver and Intestinal Disease
Hofmann, A. F. (1999) · Archives of Internal Medicine · doi:10.1001/archinte.159.22.2647 · Cited by 972
Wyatt, J. S., Delpy, D. T., Cope, M., Wray, S., & Reynolds, E. O. R. (1986) · The Lancet · doi:10.1016/s0140-6736(86)90467-8 · Cited by 875
Narisawa, T., Magadia, N. E., Weisburger, J. H., & Wynder, E. L. (1974) · JNCI Journal of the National Cancer Institute · doi:10.1093/jnci/53.4.1093 · Cited by 704
Hepatology. A Textbook of Liver Disease
(1990) · Annals of Internal Medicine · doi:10.7326/0003-4819-113-3-259_2 · Cited by 624
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Kovàcs, T., Mikó, E., Ujlaki, G., Sári, Z., & Bai, P. (2020) · Advances in experimental medicine and biology · doi:10.1007/978-3-030-35727-6_10 · Cited by 134
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Gallagher, K., Catesson, A., Griffin, J. L., Holmes, E., & Williams, H. R. T. (2021) · Journal of Crohn's and Colitis · doi:10.1093/ecco-jcc/jjaa227 · Cited by 133
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Kan, H., Zhao, F., Zhang, X., Ren, H., & Gao, S. (2015) · Environmental Science & Technology · doi:10.1021/acs.est.5b02990 · Cited by 132
Clavel, T., Neto, J. C. G., Lagkouvardos, I., & Ramer‐Tait, A. E. (2017) · Immunological Reviews · doi:10.1111/imr.12578 · Cited by 132
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Xie, J., Li, H., Zhang, X., Yang, T., Yue, M., Zhang, Y., Chen, S., Cui, N., Yuan, C., Li, J., et al. (2023) · Nature Microbiology · doi:10.1038/s41564-022-01279-6 · Cited by 132
Prediagnostic Plasma Bile Acid Levels and Colon Cancer Risk: A Prospective Study
Kuhn, T. E., Stępień, M., López‐Nogueroles, M., Damms-Machado, A., Sookthai, D., Johnson, T., Roca, M., Hüsing, A., Maldonado, S. G., Cross, A. J., et al. (2019) · JNCI Journal of the National Cancer Institute · doi:10.1093/jnci/djz166 · Cited by 131
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Manchester, A. C., Webb, C. B., Blake, A. B., Sarwar, F., Lidbury, J. A., Steiner, J. M., & Suchodolski, J. S. (2019) · Journal of Veterinary Internal Medicine · doi:10.1111/jvim.15635 · Cited by 131
Response of Intestinal Microbiota to Antibiotic Growth Promoters in Chickens
Lin, J., Hunkapiller, A. A., Layton, A. C., Chang, Y., & Robbins, K. R. (2013) · Foodborne Pathogens and Disease · doi:10.1089/fpd.2012.1348 · Cited by 131
Walker, A., Pfitzner, B., Neschen, S., Kahle, M., Harir, M., Lucio, M., Moritz, F., Tziotis, D., Witting, M. A., Rothballer, M., et al. (2014) · The ISME Journal · doi:10.1038/ismej.2014.79 · Cited by 130
Disease-Associated Changes in Bile Acid Profiles and Links to Altered Gut Microbiota
Joyce, S. A., & Gahan, C. G. M. (2017) · Digestive Diseases · doi:10.1159/000450907 · Cited by 130
Microbial Metabolites, Postbiotics, and Intestinal Epithelial Function
Mayorgas, A., Dotti, I., & Salas, A. (2020) · Molecular Nutrition & Food Research · doi:10.1002/mnfr.202000188 · Cited by 130
Albaugh, V. L., Flynn, C. R., Cai, S. B., Xiao, Y., Tamboli, R. A., & Abumrad, N. N. (2015) · The Journal of Clinical Endocrinology & Metabolism · doi:10.1210/jc.2015-2467 · Cited by 129
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Wong, S., Stephens, W. Z., Burns, A. R., Stagaman, K., David, L. A., Bohannan, B. J. M., Guillemin, K. J., & Rawls, J. F. (2015) · mBio · doi:10.1128/mbio.00687-15 · Cited by 128
Interplay between bile acid metabolism and microbiota in irritable bowel syndrome
Dior, M., Delagreverie, H. M., Duboc, H., Jouet, P., Coffin, B., Brot, L., Humbert, L., Trugnan, G., Seksik, P., Sokol, H., et al. (2016) · Neurogastroenterology & Motility · doi:10.1111/nmo.12829 · Cited by 128
Clavel, T., Lepage, P., & Charrier, C. (2014) · Springer eBooks · doi:10.1007/978-3-642-30138-4_343 · Cited by 128
The role of the gut microbiota in health and cardiovascular diseases
Wang, L., Wang, S., Zhang, Q., He, C., Fu, C., & Wei, Q. (2022) · Molecular Biomedicine · doi:10.1186/s43556-022-00091-2 · Cited by 132
Lagkouvardos, I., Kläring, K., Heinzmann, S. S., Platz, S., Scholz, B., Engel, K., Schmitt‐Kopplin, P., Haller, D., Rohn, S., Skurk, T., et al. (2015) · Molecular Nutrition & Food Research · doi:10.1002/mnfr.201500125 · Cited by 127
Kläring, K., Hanske, L., Bui, T. P. N., Charrier, C., Blaut, M., Haller, D., Plugge, C. M., & Clavel, T. (2013) · INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · doi:10.1099/ijs.0.051441-0 · Cited by 127
Microbial Induction of Immunity, Inflammation, and Cancer
Greer, J. B., & O’Keefe, S. J. (2011) · Frontiers in Physiology · doi:10.3389/fphys.2010.00168 · Cited by 127
Bajaj, J. S. (2015) · Alimentary Pharmacology & Therapeutics · doi:10.1111/apt.13435 · Cited by 127
Survival of the Fittest: How Bacterial Pathogens Utilize Bile To Enhance Infection
Sistrunk, J. R., Nickerson, K. P., Chanin, R. B., Rasko, D. A., & Faherty, C. S. (2016) · Clinical Microbiology Reviews · doi:10.1128/cmr.00031-16 · Cited by 127
FXR Agonists as Therapeutic Agents for Non-alcoholic Fatty Liver Disease
Carr, R. M., & Reid, A. E. (2015) · Current Atherosclerosis Reports · doi:10.1007/s11883-015-0500-2 · Cited by 126
Bile acids and their receptors in regulation of gut health and diseases
Lin, S., Wang, S., Wang, P., Tang, C., Wang, Z., Chen, L., Luo, G., Chen, H., Liu, Y., Feng, B., et al. (2022) · Progress in Lipid Research · doi:10.1016/j.plipres.2022.101210 · Cited by 128
Candela, M., Centanni, M., Fiori, J., Biagi, E., Turroni, S., Orrico, C., Bergmann, S., Hammerschmidt, S., & Brigidi, P. (2010) · Microbiology · doi:10.1099/mic.0.038307-0 · Cited by 125
Sex-Specific Effects of Organophosphate Diazinon on the Gut Microbiome and Its Metabolic Functions
Gao, B., Bian, X., Mahbub, R., & Lü, K. (2016) · Environmental Health Perspectives · doi:10.1289/ehp202 · Cited by 125
Influence of gut microbiota on the development and progression of nonalcoholic steatohepatitis
Ghetti, F. D. F., de Oliveira, D. G., de Oliveira, J. M., Ferreira, L. E. V. V. D. C., Cesar, D. E., & Moreira, A. P. B. (2017) · European Journal of Nutrition · doi:10.1007/s00394-017-1524-x · Cited by 125
Ijssennagger, N., Derrien, M., van Doorn, G. M., Rijnierse, A., van den Bogert, B., Müller, M. M., Dekker, J. P., Kleerebezem, M., & van der Meer, R. (2012) · PLoS ONE · doi:10.1371/journal.pone.0049868 · Cited by 124
Bile acids regulate intestinal cell proliferation by modulating EGFR and FXR signaling
Dossa, A. Y., Escobar, O. H., Golden, J. M., Frey, M. R., Ford, H. R., & Gayer, C. P. (2015) · American Journal of Physiology-Gastrointestinal and Liver Physiology · doi:10.1152/ajpgi.00065.2015 · Cited by 124
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Dubois, T., Tremblay, Y. D. N., Hamiot, A., Martin‐Verstraete, I., Deschamps, J., Monot, M., Briandet, R., & Dupuy, B. (2019) · npj Biofilms and Microbiomes · doi:10.1038/s41522-019-0087-4 · Cited by 124
Gut Microbiome and Response to Cardiovascular Drugs
Tuteja, S., & Ferguson, J. F. (2019) · Circulation Genomic and Precision Medicine · doi:10.1161/circgen.119.002314 · Cited by 124
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Philipp, B. (2010) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-010-2998-0 · Cited by 124
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Descamps, H. C., Herrmann, B. I., Wiredu, D., & Thaiss, C. A. (2019) · EBioMedicine · doi:10.1016/j.ebiom.2019.05.063 · Cited by 123
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Little, R., Wine, E., Kamath, B. M., Griffiths, A. M., & Ricciuto, A. (2020) · World Journal of Gastroenterology · doi:10.3748/wjg.v26.i21.2768 · Cited by 123
Bile acids as inflammatory mediators and modulators of intestinal permeability
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Wu, R., Xiong, R., Li, Y., Chen, J., & Yan, R. (2023) · Journal of Autoimmunity · doi:10.1016/j.jaut.2023.103062 · Cited by 124
Roles of bile acids signaling in neuromodulation under physiological and pathological conditions
Chen, X., Huang, X., Wang, D., Yu, D., Hou, S., Cui, H., & Song, L. (2023) · Cell & Bioscience · doi:10.1186/s13578-023-01053-z · Cited by 128
Gut microbiota and obesity: Role in aetiology and potential therapeutic target
Moran, C. P., & Shanahan, F. (2014) · Best Practice & Research Clinical Gastroenterology · doi:10.1016/j.bpg.2014.07.005 · Cited by 122
Emerging Concepts Linking Obesity with the Hallmarks of Cancer
Donohoe, C. L., Lysaght, J., O'Sullivan, J. N., & Reynolds, J. V. (2016) · Trends in Endocrinology and Metabolism · doi:10.1016/j.tem.2016.08.004 · Cited by 122
Importance of microbial defence systems to bile salts and mechanisms of serum cholesterol reduction
Horáčková, Š., Plocková, M., & Demnerová, K. (2017) · Biotechnology Advances · doi:10.1016/j.biotechadv.2017.12.005 · Cited by 124
A prospective study of serum metabolites and colorectal cancer risk
Cross, A. J., Moore, S. C., Boca, S. M., Huang, W., Xiong, X., Stolzenberg‐Solomon, R. Z., Sinha, R. R., & Sampson, J. N. (2014) · Cancer · doi:10.1002/cncr.28799 · Cited by 122
Doden, H. L., Sallam, L., Devendran, S., Ly, L. K., Doden, G., Daniel, S. L., Alves, J. M. P., & Ridlon, J. M. (2018) · Applied and Environmental Microbiology · doi:10.1128/aem.00235-18 · Cited by 121
Self-citationFoley, S. E., Tuohy, C. A., Dunford, M., Grey, M. J., Luca, H. E. D., Cawley, C., Szabady, R. L., Maldonado‐Contreras, A., Houghton, J. M., Ward, D. V., et al. (2021) · Microbiome · doi:10.1186/s40168-021-01137-3 · Cited by 121
Masse, K. E., & Lu, V. B. (2023) · Frontiers in Endocrinology · doi:10.3389/fendo.2023.1169624 · Cited by 120
“FXR regulates a multitude of genes involved in bile acid, lipid, and glucose metabolism (15).”
BackgroundInfluentialClostridium difficile infection: molecular pathogenesis and novel therapeutics
Rineh, A., Kelso, M. J., Vatansever, F., Tegos, G. P., & Hamblin, M. R. (2014) · Expert Review of Anti-infective Therapy · doi:10.1586/14787210.2014.866515 · Cited by 120
Torres, J., Palmela, C., Brito, H., Bao, X., Ruiqi, H., Moura-Santos, P., da Silva, J. P., Oliveira, A. A. S., Vieira, C. L., Pérez, K., et al. (2017) · United European Gastroenterology Journal · doi:10.1177/2050640617708953 · Cited by 121
Alemán, J. O., Bokulich, N. A., Swann, J. R., Walker, J. M., da Rosa, J. C., Battaglia, T., Costabile, A., Pechlivanis, A., Liang, Y., Breslow, J. L., et al. (2018) · Journal of Translational Medicine · doi:10.1186/s12967-018-1619-z · Cited by 120
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Fukui, H. (2020) · Gut and Liver · doi:10.5009/gnl20032 · Cited by 121
Probiotics and the BSH-related cholesterol lowering mechanism: a Jekyll and Hyde scenario
Choi, S.-B., Lew, L.-C., Yeo, S.-K., Nair Parvathy, S., & Liong, M.-T. (2015) · Critical Reviews in Biotechnology · doi:10.3109/07388551.2014.889077 · Cited by 119
Crosstalk between Bile Acids and Gut Microbiota and Its Impact on Farnesoid X Receptor Signalling
Wahlstrom, A. M., Kovatcheva‐Datchary, P., Ståhlman, M., Bäckhed, F., & Marschall, H. (2017) · Digestive Diseases · doi:10.1159/000450982 · Cited by 119
Tao, J., Li, S., Gan, R., Zhao, C., Meng, X., & Li, H. (2019) · Critical Reviews in Food Science and Nutrition · doi:10.1080/10408398.2018.1555789 · Cited by 120
Gut and Root Microbiota Commonalities
Ramírez-Puebla, S. T., Servín-Garcidueñas, L. E., Jiménez‐Marín, B., Bolaños, L. M., Rosenblueth, M., Martínez, J., Rogel, M. A., Ormeño‐Orrillo, E., & Martínez‐Romero, E. (2012) · Applied and Environmental Microbiology · doi:10.1128/aem.02553-12 · Cited by 119
The Lactobacillus Bile Salt Hydrolase Repertoire Reveals Niche-Specific Adaptation
O’Flaherty, S., Briner Crawley, A., Theriot, C. M., & Barrangou, R. (2018) · mSphere · doi:10.1128/msphere.00140-18 · Cited by 118
Mechanisms responsible for the hypocholesterolaemic effect of regular consumption of probiotics
dos Reis, S. A., da Conceição, L. L., Rosa, D. D., Siqueira, N. P., & Pelúzio, M. D. C. G. (2016) · Nutrition Research Reviews · doi:10.1017/s0954422416000226 · Cited by 118
Crisol‐Martínez, E., Stanley, D., Geier, M. S., Hughes, R., & Moore, R. J. (2017) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-017-8193-9 · Cited by 118
Bile Acids and Cancer: Direct and Environmental-Dependent Effects
Ciaula, A. D., Wang, D. Q. ‐., Molina‐Molina, E., Baccetto, R., Calamita, G., Palmieri, V. O., & Portincasa, P. (2017) · Annals of Hepatology · doi:10.5604/01.3001.0010.5501 · Cited by 119
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Xiong, R., Gunter, C., Fleming, E. S., Vernon, S. D., Bateman, L., Unutmaz, D., & Oh, J. (2022) · Cell Host & Microbe · doi:10.1016/j.chom.2023.01.001 · Cited by 118
Wegner, K., Just, S., Gau, L., Henrike, M., Gérard, P., Lepage, P., Clavel, T., & Rohn, S. (2016) · Analytical and Bioanalytical Chemistry · doi:10.1007/s00216-016-0048-1 · Cited by 117
Swine gut microbiota and its interaction with host nutrient metabolism
Wang, H., Xu, R., Zhang, H., Su, Y., & Zhu, W. (2020) · Animal nutrition · doi:10.1016/j.aninu.2020.10.002 · Cited by 117
Wang, Y., Gao, X., Zhang, X., Xiao, F., Hu, H., Li, X., Dong, F., Sun, M., Xiao, Y., Ge, T., et al. (2021) · Gut Microbes · doi:10.1080/19490976.2020.1865708 · Cited by 117
Gut microbiota inhibit Asbt-dependent intestinal bile acid reabsorption via Gata4
Out, C., Patankar, J. V., Doktorova, M., Boesjes, M., Bos, T., de Boer, S., Havinga, R., Wolters, H., Boverhof, R., van Dijk, T. H., et al. (2015) · Journal of Hepatology · doi:10.1016/j.jhep.2015.04.030 · Cited by 117
Human intestinal microbiota: cross-talk with the host and its potential role in colorectal cancer
Candela, M., Guidotti, M., Fabbri, A., Brigidi, P., Franceschi, C., & Fiorentini, C. (2010) · Critical Reviews in Microbiology · doi:10.3109/1040841x.2010.501760 · Cited by 117
Probiotics—Interactions with Bile Acids and Impact on Cholesterol Metabolism
Pavlović, N., Stankov, K., & Mikov, M. (2012) · Applied Biochemistry and Biotechnology · doi:10.1007/s12010-012-9904-4 · Cited by 118
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Vipperla, K., & O'Keefe, S. J. (2012) · Nutrition in Clinical Practice · doi:10.1177/0884533612452012 · Cited by 116
Torres, J., de Chambrun, G. P., Itzkowitz, S. H., Sachar, D. B., & Colombel, J. F. (2011) · Alimentary Pharmacology & Therapeutics · doi:10.1111/j.1365-2036.2011.04753.x · Cited by 117
Role of farnesoid X receptor and bile acids in alcoholic liver disease
Manley, S., & Ding, W. (2015) · Acta Pharmaceutica Sinica B · doi:10.1016/j.apsb.2014.12.011 · Cited by 116
Development of a covalent inhibitor of gut bacterial bile salt hydrolases
Adhikari, A. A., Seegar, T. C. M., Ficarro, S. B., McCurry, M. D., Ramachandran, D., Yao, L., Chaudhari, S. N., Ndousse-Fetter, S., Banks, A. S., Marto, J. A., et al. (2020) · Nature Chemical Biology · doi:10.1038/s41589-020-0467-3 · Cited by 116
Completion of the gut microbial epi-bile acid pathway
Doden, H. L., Wolf, P. G., Gaskins, H. R., Anantharaman, K., Alves, J. M. P., & Ridlon, J. M. (2021) · Gut Microbes · doi:10.1080/19490976.2021.1907271 · Cited by 117
Self-citationKoh, E., Hwang, I. Y., Lee, H. L., Sotto, R. D., Lee, J. W. J., Lee, Y. S., March, J. C., & Chang, M. W. (2022) · Nature Communications · doi:10.1038/s41467-022-31334-z · Cited by 116
Diet, microbiota, and dysbiosis: a ‘recipe’ for colorectal cancer
Vipperla, K., & O’Keefe, S. J. (2016) · Food & Function · doi:10.1039/c5fo01276g · Cited by 117
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Angelis, M. D., Garruti, G., Minervini, F., Bonfrate, L., Portincasa, P., & Gobbetti, M. (2017) · Current Medicinal Chemistry · doi:10.2174/0929867324666170428103848 · Cited by 115
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Massafra, V., & van Mil, S. W. C. (2017) · Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease · doi:10.1016/j.bbadis.2017.10.003 · Cited by 115
Camilleri, M., Lyle, B. J., Madsen, K. L., Sonnenburg, J. L., Verbeke, K., & Wu, G. D. (2019) · American Journal of Physiology-Gastrointestinal and Liver Physiology · doi:10.1152/ajpgi.00063.2019 · Cited by 115
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Najjar, R. S., & Feresin, R. G. (2019) · Nutrients · doi:10.3390/nu11112712 · Cited by 115
Arora, K., Green, M., & Prakash, S. (2020) · Frontiers in Bioengineering and Biotechnology · doi:10.3389/fbioe.2020.537847 · Cited by 115
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Macpherson, A. J., Heikenwälder, M. F., & Ganal-Vonarburg, S. C. (2016) · Cell Host & Microbe · doi:10.1016/j.chom.2016.10.016 · Cited by 114
Avuthu, N., & Guda, C. (2022) · Microbiology Spectrum · doi:10.1128/spectrum.00013-22 · Cited by 114
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Zwicker, B. L., & Agellon, L. B. (2013) · The International Journal of Biochemistry & Cell Biology · doi:10.1016/j.biocel.2013.04.012 · Cited by 114
Antharam, V. C., McEwen, D. C., Garrett, T. J., Dossey, A. T., Li, E. C., Kozlov, A., Mesbah, Z., & Wang, G. P. (2016) · PLoS ONE · doi:10.1371/journal.pone.0148824 · Cited by 113
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Metadata
- Authors
- Ridlon, J. M., Kang, D.-J., & Hylemon, P. B.
- Affiliations
- Virginia Commonwealth University (US)
- Venue
- Journal of Lipid Research
- Publisher
- Elsevier BV
- Published
- 2006-02
- Volume
- 47
- Issue
- 2
- Pages
- 241-259
- ISSN
- 0022-2275 (ISSN-L)
- OpenAlex
- W2071273298
- Cited by
- 2,829
- References
- 181
- Citations by year
- 2026: 202 · 2025: 220 · 2024: 211 · 2023: 245 · 2022: 263 · 2021: 252 · 2020: 238 · 2019: 200 · 2018: 191 · 2017: 161 · 2016: 130 · 2015: 119 · 2014: 87 · 2013: 91 · 2012: 51
- FWCI
- 1.11
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Journal of Lipid Research (publishedVersion, cc-by)
- PubMed (publishedVersion)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
- Funders
- National Institute of Diabetes and Digestive and Kidney Diseases (P01DK038030, P01 DK 38030)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Gut microbiota and health
- Physical Sciences › Chemistry › Organic Chemistry › Steroid Chemistry and Biochemistry
- Health Sciences › Medicine › Oncology › Drug Transport and Resistance Mechanisms
- Keywords
- secondary bile acids, enterohepatic circulation, enzyme kinetics, enzyme structure, gene cloning, probiotics, bile acid sequestration, colon cancer, gallstones
- MeSH terms
- Amidohydrolases, Amino Acid Sequence, Bacteria, Bile Acids and Salts, Biotransformation, Cholic Acids, Colonic Neoplasms, Humans, Hydrogen Sulfide, Hydroxysteroid Dehydrogenases, Intestinal Mucosa, Intestines, Models, Molecular, Molecular Sequence Data, Taurine, Molecular Structure, Sequence Homology, Amino Acid
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