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Self-assembly and binding of a sorting nexin to sorting endosomes

Kurten, Richard C., Eddington, Anthony D., Chowdhury, Parag, Smith, Richard D., Davidson, April D., Shank, Brian B.·2001·Journal of Cell Science

Abstract

The fate of endocytosed membrane proteins and luminal contents is determined by a materials processing system in sorting endosomes. Endosomal retention is a mechanism that traps specific proteins within this compartment, and thereby prevents their recycling. We report that a sorting nexin SNX1, a candidate endosomal retention protein, self-assembles in vitro and in vivo, and has this property in common with its yeast homologue Vps5p. A comparison of SNX1 expressed in bacterial and in mammalian systems and analyzed by size-exclusion chromatography indicates that in cytosol SNX1 tetramers are part of a larger complex with additional proteins. An endosomal retention function would require that SNX1 bind to endosomal membranes, yet the complexes that we analyzed were largely soluble and little SNX1 was found in pellet fractions. Using green fluorescent protein fusions, endocytic compartment markers and fluorescence recovery after photobleaching, we found that there is an equilibrium between free cytoplasmic and early/sorting endosome-bound pools of green fluorescent protein-SNX1. Fluorescence resonance energy transfer indicated that spectral variants of green fluorescent protein-SNX1 were oligomeric in vivo. In cell extracts, these green fluorescent protein-SNX1 oligomers corresponded to tetrameric and larger complexes of green fluorescent protein-SNX1. Using video microscopy, we observed small vesicle docking and tubule budding from large green fluorescent protein-SNX1 coated endosomes, which are features consistent with their role as sorting endosomes. Movies available on-line: http://www.biologists.com/JCS/movies/jcs2058.html

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Research works printed but not linked: 50

  1. Aoe, 1998, Modulation of intracellular transport by transported proteins: insight from regulation of COPI-mediated transport, Proc. Natl. Acad. Sci. USA, 95, 1624, 10.1073/pnas.95.4.1624 · DOI
  2. Aridor, 1998, Cargo selection by the COPII budding machinery during export from the ER, J. Cell Biol, 141, 61, 10.1083/jcb.141.1.61 · DOI
  3. Berdichevsky, 1994, Branching morphogenesis of human mammary epithelial cells in collagen gels, J. Cell Sci, 107, 3557, 10.1242/jcs.107.12.3557 · DOI
  4. Cadena, 1994, The intracellular tyrosine kinase domain of the epidermal growth factor receptor undergoes a conformational change upon autophosphorylation, J. Biol. Chem, 269, 260, 10.1016/S0021-9258(17)42343-X · DOI
  5. Candido, 1978, Sodium butyrate inhibits histone deacetylation in cultured cells, Cell, 14, 105, 10.1016/0092-8674(78)90305-7 · DOI · Paper page
  6. Carter, 1998, Endocytosis of functional epidermal growth factor receptor-green fluorescent protein chimera, J. Biol. Chem, 273, 35000, 10.1074/jbc.273.52.35000 · DOI
  7. Chalfie, 1994, Green fluorescent protein as a marker for gene expression, Science, 263, 802, 10.1126/science.8303295 · DOI · Paper page
  8. Chang, 1993, Ligand-induced internalization of the epidermal growth factor receptor is mediated by multiple endocytic codes analogous to the tyrosine motif found in constitutively internalized receptors, J. Biol. Chem, 268, 19312, 10.1016/S0021-9258(19)36515-9 · DOI
  9. Chen, 1985, Identification of two lysosomal membrane glycoproteins, J. Cell Biol, 101, 85, 10.1083/jcb.101.1.85 · DOI
  10. Chin, 2000, Hrs interacts with sorting Nexin 1 and regulates degradation of epidermal growth factor receptor, J. Biol. Chem, 276, 7069, 10.1074/jbc.M004129200 · DOI
  11. Dautry-Varsat, 1983, pH and the recycling of transferrin during receptor-mediated endocytosis, Proc. Natl. Acad. Sci. USA, 80, 2258, 10.1073/pnas.80.8.2258 · DOI
  12. Dunn, 1989, Iterative fractionation of recycling receptors from lysosomally destined ligands in an early sorting endosome, J. Cell Biol, 109, 3303, 10.1083/jcb.109.6.3303 · DOI · Paper page
  13. Faundez, 1998, A function for the AP3 coat complex in synaptic vesicle formation from endosomes, Cell, 93, 423, 10.1016/S0092-8674(00)81170-8 · DOI
  14. Felder, 1990, Kinase activity controls the sorting of the epidermal growth factor receptor within the multivesicular body, Cell, 61, 623, 10.1016/0092-8674(90)90474-S · DOI
  15. French, 1994, Postendocytic trafficking of epidermal growth factor-receptor complexes is mediated through saturable and specific endosomal interactions, J. Biol. Chem, 269, 15749, 10.1016/S0021-9258(17)40744-7 · DOI
  16. Gill, 2000, Interactions among sorting nexins, Mol. Biol. Cell, 11, 214a
  17. Goldberg, 2000, Decoding of sorting signals by coatomer through a GTPase switch in the COPI coat complex, Cell, 100, 671, 10.1016/S0092-8674(00)80703-5 · DOI
  18. Graham, 1973, A new technique for the assay of infectivity of human adenovirus 5 DNA, Virology, 52, 456, 10.1016/0042-6822(73)90341-3 · DOI
  19. Guarnieri, 1993, The motif Tyr-X-X-hydrophobic residue mediates lysosomal membrane targeting of lysosome-associated membrane protein 1, J. Biol. Chem, 268, 1941, 10.1016/S0021-9258(18)53945-4 · DOI
  20. Haft, 2000, Human Orthologs of Yeast Vacuolar Protein Sorting Proteins Vps26, 29, and 35: Assembly into Multimeric Complexes, Mol. Biol. Cell, 11, 4105, 10.1091/mbc.11.12.4105 · DOI · Paper page
  21. Herbst, 1994, Regulation of postendocytic trafficking of the epidermal growth factor receptor through endosomal retention, J. Biol. Chem, 269, 12865, 10.1016/S0021-9258(18)99956-4 · DOI
  22. Honegger, 1987, Point mutation at the ATP binding site of EGF receptor abolishes protein-tyrosine kinase activity and alters cellular routing, Cell, 51, 199, 10.1016/0092-8674(87)90147-4 · DOI
  23. Horazdovsky, 1997, A sorting nexin-1 homologue, Vps5p, forms a complex with Vps17p and is required for recycling the vacuolar protein-sorting receptor, Mol. Biol. Cell, 8, 1529, 10.1091/mbc.8.8.1529 · DOI
  24. Kil, 1999, A leucine-based determinant in the epidermal growth factor receptor juxtamembrane domain is required for the efficient transport of ligand-receptor complexes to lysosomes, J. Biol. Chem, 274, 3141, 10.1074/jbc.274.5.3141 · DOI
  25. Kornilova, 1996, Lysosomal targeting of epidermal growth factor receptors via a kinase-dependent pathway is mediated by the receptor carboxyl-terminal residues 1022-1123, J. Biol. Chem, 271, 30340, 10.1074/jbc.271.48.30340 · DOI
  26. Kurten, 1996, Enhanced degradation of EGF receptors by a sorting nexin, SNX1, Science, 272, 1008, 10.1126/science.272.5264.1008 · DOI · Paper page
  27. Levkowitz, 1999, Ubiquitin ligase activity and tyrosine phosphorylation underlie suppression of growth factor signaling by c-Cbl/Sli-1, Mol. Cell, 4, 1029, 10.1016/S1097-2765(00)80231-2 · DOI
  28. Levkowitz, 1998, c-Cbl/Sli-1 regulates endocytic sorting and ubiquitination of the epidermal growth factor receptor, Genes Dev, 12, 3663, 10.1101/gad.12.23.3663 · DOI
  29. Milsted, 1987, Phenotypes of HeLa S3 variant cell lines resistant to growth inhibition by sodium butyrate, In Vitro Cell Dev. Biol, 23, 395, 10.1007/BF02623854 · DOI
  30. Miyawaki, 1997, Fluorescent indicators for Ca2+ based on green fluorescent proteins and calmodulin, Nature, 388, 882, 10.1038/42264 · DOI
  31. Mukherjee, 1997, Endocytosis, Physiol. Rev, 77, 759, 10.1152/physrev.1997.77.3.759 · DOI
  32. Nesterov, 1995, Association of epidermal growth factor receptors with coated pit adaptins via a tyrosine phosphorylation-regulated mechanism, J. Biol. Chem, 270, 6320, 10.1074/jbc.270.11.6320 · DOI
  33. Nesterov, 1995, Ligand-induced endocytosis of epidermal growth factor receptors that are defective in binding adaptor proteins, Proc. Natl. Acad. Sci. USA, 92, 8719, 10.1073/pnas.92.19.8719 · DOI
  34. Nothwehr, 1997, The yeast VPS5/GRD2 gene encodes a sorting nexin-1-like protein required for localizing membrane proteins to the late Golgi, J. Cell Sci, 110, 1063, 10.1242/jcs.110.9.1063 · DOI
  35. Ohno, 1995, Interaction of tyrosine-based sorting signals with clathrin-associated proteins, Science, 269, 1872, 10.1126/science.7569928 · DOI
  36. Opresko, 1995, Endocytosis and lysosomal targeting of epidermal growth factor receptors are mediated by distinct sequences independent of the tyrosine kinase domain, J. Biol. Chem, 270, 4325, 10.1074/jbc.270.9.4325 · DOI
  37. Pollok, 1999, Using GFP in FRET-based applications, Trends Cell Biol, 9, 57, 10.1016/S0962-8924(98)01434-2 · DOI
  38. Ponting, 1996, Novel domains in NADPH oxidase subunits, sorting nexins, and PtdIns 3-kinases: binding partners of SH3 domains?, Protein Sci, 5, 2353, 10.1002/pro.5560051122 · DOI · Paper page
  39. Presley, 1997, ER-to-Golgi transport visualized in living cells, Nature, 389, 81, 10.1038/38001 · DOI
  40. Roberts, 1999, Endosome fusion in living cells overexpressing GFP-rab5, J. Cell Sci, 112, 3667, 10.1242/jcs.112.21.3667 · DOI
  41. Sealy, 1978, The effect of sodium butyrate on histone modification, Cell, 14, 115, 10.1016/0092-8674(78)90306-9 · DOI
  42. Seaman, 1998, A membrane coat complex essential for endosome-to-Golgi retrograde transport in yeast, J. Cell Biol, 142, 665, 10.1083/jcb.142.3.665 · DOI · Paper page
  43. Slaaby, 1998, PLD2 complexes with the EGF receptor and undergoes tyrosine phosphorylation at a single site upon agonist stimulation, J. Biol. Chem, 273, 33722, 10.1074/jbc.273.50.33722 · DOI
  44. Sorkin, 1993, Interaction of activated EGF receptors with coated pit adaptins, Science, 261, 612, 10.1126/science.8342026 · DOI
  45. Sorkin, 1996, Epidermal growth factor receptor interaction with clathrin adaptors is mediated by the Tyr974-containing internalization motif, J. Biol. Chem, 271, 13377, 10.1074/jbc.271.23.13377 · DOI
  46. Stenmark, 1994, Inhibition of rab5 GTPase activity stimulates membrane fusion in endocytosis, EMBO J, 13, 1287, 10.1002/j.1460-2075.1994.tb06381.x · DOI · Paper page
  47. Vieira, 1996, Control of EGF receptor signaling by clathrin-mediated endocytosis, Science, 274, 2086, 10.1126/science.274.5295.2086 · DOI · Paper page
  48. Wells, 1990, Ligand-induced transformation by a noninternalizing epidermal growth factor receptor, Science, 247, 962, 10.1126/science.2305263 · DOI
  49. Wu, 1994, Resonance energy transfer: methods and applications, Anal. Biochem, 218, 1, 10.1006/abio.1994.1134 · DOI
  50. Yang, 1998, Improved fluorescence and dual color detection with enhanced blue and green variants of the green fluorescent protein, J. Biol. Chem, 273, 8212, 10.1074/jbc.273.14.8212 · DOI

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Metadata

Authors
Kurten, R. C., Eddington, A. D., Chowdhury, P., Smith, R. D., Davidson, A. D., & Shank, B. B.
Venue
Journal of Cell Science
Published
2001-05-01
Volume
114
Issue
9
Pages
1743-1756
ISSN
  • 0021-9533
  • 1477-9137
Cited by
65
References
2
Language
en

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