WikiPathways: Pathway Editing for the People

Cited by (732)

Items 101–200 of 732

1. A randomised controlled phase II trial of pre-operative celecoxib treatment reveals anti-tumour transcriptional response in primary breast cancer
   Rita D. Brandão, Jürgen Veeck, Koen K Van de Vijver, Patrick J. Lindsey, Bart de Vries, Catharina H. M. J. van Elssen, Marinus J. Blok, Kristien Keymeulen, Torik Ayoubi, Hubert J.M. Smeets et al. · 2013 · Breast Cancer Research
2. From ‘Omics to Multi-omics Technologies: the Discovery of Novel Causal Mediators
   Pedrum Mohammadi‐Shemirani, Tushar Sood, Guillaume Paré · 2023 · Current Atherosclerosis Reports
3. BREEDING AND GENETICS SYMPOSIUM: Networks and pathways to guide genomic selection1–3
   W. M. Snelling, Robert A. Cushman, John W. Keele, Christian Maltecca, M. G. Thomas, Marina R. S. Fortes, Antônio Reverter · 2012 · Journal of Animal Science
4. RNA-Seq Provides New Insights in the Transcriptome Responses Induced by the Carcinogen Benzo[a]pyrene
   Joost H.M. van Delft, Stan Gaj, Matthias Lienhard, M. W. Albrecht, А. А. Кирпий, Karen J. J. Brauers, Sandra M.H. Claessen, Daneida Lizárraga, Hans Rudolf Lehrach, Ralf Herwig et al. · 2012 · Toxicological Sciences
5. INOH: ontology-based highly structured database of signal transduction pathways
   Shūichi Yamamoto, N. Sakai, Harukazu Nakamura, H. Fukagawa, Ken Fukuda, T. Takagi · 2011 · Database
6. Gene set analysis exploiting the topology of a pathway
   Maria Sofia Massa, Monica Chiogna, Chiara Romualdi · 2010 · BMC Systems Biology
7. Extending Biochemical Databases by Metabolomic Surveys
   Oliver Fiehn, Dinesh Kumar Barupal, Tobias Kind · 2011 · Journal of Biological Chemistry
8. The PluriNetWork: An Electronic Representation of the Network Underlying Pluripotency in Mouse, and Its Applications
   Anup Som, Clemens Harder, Boris Greber, Marcin Siatkowski, Yogesh Paudel, Gregor Warsow, H. Clemens, Hans Robert Schöler, Georg Fuellen · 2010 · PLoS ONE
9. Critical assessment of human metabolic pathway databases: a stepping stone for future integration
   Miranda D. Stobbe, Sander M. Houten, Gerbert A. Jansen, Antoine H. C. van Kampen, Perry D. Moerland · 2011 · BMC Systems Biology
10. Wikis and Collaborative Writing Applications in Health Care: A Scoping Review
    Patrick Michel Archambault, Tom H van de Belt, Francisco Jose Grajales III, Marjan J. Faber, Craig E. Kuziemsky, Susie Gagnon, Andrea Bilodeau, Simon Rioux, Willianne L.D.M. Nelen, Marie‐Pierre Gagnon et al. · 2013 · Journal of Medical Internet Research
11. Tools for the functional interpretation of metabolomic experiments
    Mónica Chagoyen, Florencio Pazos · 2012 · Briefings in Bioinformatics
12. Mechanosensitive Kinases Regulate Stiffness-Induced Cardiomyocyte Maturation
    Jennifer L. Young, Kyle Kretchmer, Matthew G. Ondeck, Alexander C. Zambon, Adam Jeffrey Engler · 2014 · Scientific Reports
13. A pathway approach to investigate the function and regulation of SREBPs
    Sabine Daemen, Martina Kutmon, Chris T. Evelo · 2013 · Genes & Nutrition
14. Integrated Enrichment Analysis of Variants and Pathways in Genome-Wide Association Studies Indicates Central Role for IL-2 Signaling Genes in Type 1 Diabetes, and Cytokine Signaling Genes in Crohn's Disease
    Peter S. Carbonetto, Matthew Stephens · 2013 · PLoS Genetics
15. Automated exploration of gene ontology term and pathway networks with ClueGO-REST
    B. Mlecnik, J. Galon, G. Bindea · 2019 · Bioinform.
16. Multiomic Big Data Analysis Challenges: Increasing Confidence in the Interpretation of Artificial Intelligence Assessments
    Melanie T. Odenkirk, David M. Reif, Erin Shammel Baker · 2021 · Analytical Chemistry
17. A zebrafish high throughput screening system used for Staphylococcus epidermidis infection marker discovery
    Wouter J. Veneman, Oliver W. Stockhammer, Leonie de Boer, Sebastian A. J. Zaat, Annemarie H. Meijer, Herman P. Spaink · 2013 · BMC Genomics
18. Genome-wide gene expression profiling of stress response in a spinal cord clip compression injury model
    Mahmood Chamankhah, Eftekhar Eftekharpour, Soheila Karimi‐Abdolrezaee, Paul Christopher Boutros, Serban San‐Marina, Michael George Fehlings · 2013 · BMC Genomics
19. Network-based approaches for modeling disease regulation and progression
    Gihanna Galindez, Sepideh Sadegh, Jan Baumbach, Tim Kacprowski, Markus List · 2022 · Computational and Structural Biotechnology Journal
20. Glucose and lipid-related biomarkers and the antidepressant response to infliximab in patients with treatment-resistant depression
    Mandakh Bekhbat, Karen Chu, Ngoc‐Anh Le, Bobbi J. Woolwine, Ebrahim Haroon, Andrew H. Miller, Jennifer C. Felger · 2018 · Psychoneuroendocrinology
21. A review on omics-based biomarkers discovery for Alzheimer's disease from the bioinformatics perspectives: Statistical approach vs machine learning approach
    Mei Sze Tan, Phaik‐Leng Cheah, Ai‐Vyrn Chin, Lai‐Meng Looi, Siow‐Wee Chang · 2021 · Computers in Biology and Medicine
22. Glucocorticoid receptor isoforms direct distinct mitochondrial programs to regulate ATP production
    David J. Morgan, Toryn M. Poolman, Andrew J.K. Williamson, Zichen Wang, Neil R. Clark, Avi Ma’ayan, Anthony David Whetton, Andy Brass, Laura C. Matthews, David William Ray · 2016 · Scientific Reports
23. PathText: a text mining integrator for biological pathway visualizations
    Brian Kemper, Takuya Matsuzaki, Yukiko Matsuoka, Yoshimasa Tsuruoka, Hiroaki Kitano, Sophia Ananiadou, Jun’ichi Tsujii · 2010 · Bioinformatics
24. Introducing WikiPathways as a Data-Source to Support Adverse Outcome Pathways for Regulatory Risk Assessment of Chemicals and Nanomaterials
    Marvin Martens, Tim Verbruggen, Penny E. H. Nymark, Roland Grafström, Lyle D. Burgoon, Hristo Aladjov, Fernando Torres Andón, Chris T. Evelo, Egon Willighagen · 2018 · Frontiers in Genetics
25. A comprehensive survey of the approaches for pathway analysis using multi-omics data integration
    Zeynab Maghsoudi, Ha Nguyen, Alireza Tavakkoli, Tin Nguyen · 2022 · Briefings in Bioinformatics
26. Immune and metabolic effects of African heritage diets versus Western diets in men: a randomized controlled trial
    Godfrey S. Temba, Tal Pecht, Vesla I. Kullaya, Nadira Vadaq, Mary Mosha, Thomas Ulas, Sneha Kanungo, Liesbeth van Emst, Lorenzo Bonaguro, Jonas Schulte-Schrepping et al. · 2025 · Nature Medicine
27. Industrial Ecology 2.0
    Chris B. Davis, Igor Nikolić, Gerard P.J. Dijkema · 2010 · Journal of Industrial Ecology
28. Epigenomics of Total Acute Sleep Deprivation in Relation to Genome-Wide DNA Methylation Profiles and RNA Expression
    Emil Nilsson, Adrian E. Desai Boström, Jessica Mwinyi, Helgi B. Schiöth · 2016 · OMICS A Journal of Integrative Biology
29. Mammalian γ2 AMPK regulates intrinsic heart rate
    Arash Yavari, Mohamed Bellahcene, Annalisa Bucchi, Syevda Sirenko, Katalin Pintér, Neil Herring, Julia Jung, Kirill V. Tarasov, Emily J. Sharpe, Markus Wolfien et al. · 2017 · Nature Communications
30. High-coverage lipidomics for functional lipid and pathway analyses
    Sin Man Lam, Zehua Wang, Bowen Li, Guanghou Shui · 2020 · Analytica Chimica Acta
31. Finding the Right Questions: Exploratory Pathway Analysis to Enhance Biological Discovery in Large Datasets
    Thomas Kelder, Bruce R. Conklin, Chris T. Evelo, Alexander R. Pico · 2010 · PLoS Biology
32. Systematic reconstruction of molecular pathway signatures using scalable single-cell perturbation screens
    Longda Jiang, Carol Dalgarno, Efthymia Papalexi, Isabella Mascio, Hans‐Hermann Wessels, Huiyoung Yun, Nika Iremadze, Gila Lithwick‐Yanai, Doron Lipson, Rahul Satija · 2025 · Nature Cell Biology
33. NaviCell: a web-based environment for navigation, curation and maintenance of large molecular interaction maps
    Inna Kuperstein, David Cohen, Stuart L. Pook, Eric Viara, Laurence Calzone, Emmanuel Barillot, Andrei Y. Zinovyev · 2013 · BMC Systems Biology
34. Ten Simple Rules for Editing Wikipedia
    Darren W. Logan, Massimo Sandal, Paul P. Gardner, Magnus Manske, Alex G. Bateman · 2010 · PLoS Computational Biology
35. Complete neural stem cell (NSC) neuronal differentiation requires a branched chain amino acids-induced persistent metabolic shift towards energy metabolism
    Francesco Bifari, Sissi Dolci, Emanuela Bottani, Annachiara Pino, Marzia Di Chio, Stefania Zorzin, Maurizio Ragni, Raluca Georgiana Zamfir, Dario Brunetti, Donatella Bardelli et al. · 2020 · Pharmacological Research
36. HPD: an online integrated human pathway database enabling systems biology studies
    Sudhir Chowbina, Xiaogang Wu, Fan Zhang, Peter M Li, Ragini Pandey, Harini N Kasamsetty, Jake Y. Chen · 2009 · BMC Bioinformatics
37. Genes with High Network Connectivity Are Enriched for Disease Heritability
    Samuel Sungil Kim, Chengzhen L. Dai, Farhad Hormozdiari, Bryce van de Geijn, Steven Gazal, Yongjin Park, Luke Jen O’Connor, Tiffany Amariuta, Po‐Ru Loh, Hilary K. Finucane et al. · 2019 · The American Journal of Human Genetics
38. Systems Biology Approaches for Discovering Biomarkers for Traumatic Brain Injury
    Jacob Feala, Mohamed Diwan M. AbdulHameed, Chenggang Yu, Bhaskar Dutta, Xueping Yu, Kara E. Schmid, Jitendra R. Dave, Frank C. Tortella, Jaques Reifman A · 2013 · Journal of Neurotrauma
39. Proteomic Signatures of Acquired Letrozole Resistance in Breast Cancer: Suppressed Estrogen Signaling and Increased Cell Motility and Invasiveness
    Syreeta L. Tilghman, Ian K. Townley, Qiu Zhong, Patrick P. Carriere, Jin Zou, Shawn D. Llopis, Lynez C. Preyan, Christopher C. Williams, Elena Skripnikova, Melyssa R. Bratton et al. · 2013 · Molecular & Cellular Proteomics
40. Using the Reactome Database
    Karen Rothfels, Marija Orlic-Milacic, Lisa R. Matthews, Robin Haw, Cristoffer Sevilla, Marc E. Gillespie, Ralf Stephan, Chuqiao Gong, Eliot Ragueneau, Bruce May et al. · 2023 · Current Protocols
41. Savant Genome Browser 2: visualization and analysis for population-scale genomics
    Marc Fiume, Eric Smith, A. Brook, Dario Strbenac, B. Turner, Aziz M. Mezlini, Mark D. Robinson, Shoshana J. Wodak, Michael Brudno · 2012 · Nucleic Acids Research
42. Comparative Transcriptome and Network Biology Analyses Demonstrate Antiproliferative and Hyperapoptotic Phenotypes in Human Keratoconus Corneas
    Matthias Macé, Stephane D. Galiacy, Angélique Erraud, José Enrique Mejía, Heather Etchevers, M Allouche, Laurence Desjardins, Patrick Calvas, François Malecaze · 2011 · Investigative Ophthalmology & Visual Science
43. Payao: a community platform for SBML pathway model curation
    Yukiko Matsuoka, Samik Ghosh, Norihiro Kikuchi, Hiroaki Kitano · 2010 · Bioinformatics
44. Podocyte-Specific Induction of Krüppel-Like Factor 15 Restores Differentiation Markers and Attenuates Kidney Injury in Proteinuric Kidney Disease
    Yiqing Guo, Jesse A. Pace, Zhengzhe Li, Avi Ma’ayan, Zichen Wang, Monica Patricia Revelo, Edward Chen, Xiangchen Gu, Ahmed Attalah, Yaqi Yang et al. · 2018 · Journal of the American Society of Nephrology
45. Network-Based Pipeline for Analyzing MS Data: An Application toward Liver Cancer
    Wilson Wen Bin Goh, Yie Hou Lee, Zubaidah M. Ramdzan, Jingjing Jin, Difeng Dong, Qingsong Lin, Maxey C. M. Chung, Limsoon Wong · 2011 · Journal of Proteome Research
46. Computational challenges in systems biology
    Allison P. Heath, Lydia E. Kavraki · 2009 · Computer Science Review
47. GPEC: A Cytoscape plug-in for random walk-based gene prioritization and biomedical evidence collection
    Duc‐Hau Le, Yung‐Keun Kwon · 2012 · Computational Biology and Chemistry
48. A network-based gene-weighting approach for pathway analysis
    Zhaoyuan Fang, Weidong Tian, Hongbin Ji · 2011 · Cell Research
49. snpXplorer: a web application to explore human SNP-associations and annotate SNP-sets
    Niccoló Tesi, Sven J. van der Lee, Marc Hulsman, Henne H. Holstege, Marcel J. T. Reinders · 2021 · Nucleic Acids Research
50. Tools for visualization and analysis of molecular networks, pathways, and -omics data
    Bianca Hermine Habermann, Jose M. Villaveces, Prasanna S. Koti · 2015 · Advances and Applications in Bioinformatics and Chemistry
51. The Micronutrient Genomics Project: a community-driven knowledge base for micronutrient research
    The Micronutrient Genomics Project Working Group, Ben van Ommen, Ahmed El‐Sohemy, John E. Hesketh, Jim Kaput, Michael Felix Fenech, Chris T. Evelo, Harry J McArdle, Jildau Bouwman, Georg Lietz et al. · 2010 · Genes & Nutrition
52. Pathway Analysis for Drug Repositioning Based on Public Database Mining
    Yongmei Pan, Tiejun Cheng, Yanli Wang, Stephen H. Bryant · 2014 · Journal of Chemical Information and Modeling
53. Assessing quality and completeness of human transcriptional regulatory pathways on a genome-wide scale
    Evgeny Shmelkov, Zuojian Tang, Iannis Aifantis, Alexander Statnikov · 2011 · Biology Direct
54. Identification and Pathway Analysis of microRNAs with No Previous Involvement in Breast Cancer
    Sandra Lorena Romero-Cordoba, Sergio Arturo Rodriguez-Cuevas, Rosa Rebollar‐Vega, Valeria Quintanar‐Jurado, Antonio Maffuz‐Aziz, Gerardo Jiménez‐Sánchez, Verónica Bautista‐Piña, Rocío Arellano-Llamas, Alfredo Hidalgo‐Miranda · 2012 · PLoS ONE
55. A Comprehensive Gene Expression Meta-analysis Identifies Novel Immune Signatures in Rheumatoid Arthritis Patients
    Afroz, Sumbul, Giddaluru, Jeevan, Vishwakarma, Sandeep, Naz, Saima, Khan, Aleem Ahmed, Khan, Nooruddin · 2017 · Frontiers in Immunology
56. Global open data management in metabolomics
    Kenneth Haug, Reza M. Salek, C. Steinbeck · 2017 · Current Opinion in Chemical Biology
57. Dandruff/seborrhoeic dermatitis is characterized by an inflammatory genomic signature and possible immune dysfunction: transcriptional analysis of the condition and treatment effects of zinc pyrithione
    Kevin J. Mills, Ping Hu, J. Henry, Makio Tamura, Jay P. Tiesman, J. Xu · 2012 · British Journal of Dermatology
58. IntPath--an integrated pathway gene relationship database for model organisms and important pathogens
    Hufeng Zhou, Jingjing Jin, Haojun Zhang, Bo Yi, Michał Woźniak, Limsoon Wong · 2012 · BMC Systems Biology
59. Search extension transforms Wiki into a relational system: A case for flavonoid metabolite database
    Masanori Arita, Kazuhiro Suwa · 2008 · BioData Mining
60. A systematic review for organizing hackathons and code camps in Covid-19 like times: Literature in demand to understand online hackathons and event result continuation
    Ari Happonen, Matvei Tikka, Usman Ahmad Usmani · 2021 · International Conference on Data and Software Engineering
61. MicroRNAs in Parkinson’s disease: a systematic review and diagnostic accuracy meta-analysis
    Diane Guévremont, Joyeeta Roy, Nicholas J. Cutfield, Joanna M. Williams · 2023 · Scientific Reports
62. Evaluating biomarkers to model cancer risk post cosmic ray exposure
    Sridharan, Deepa M., Asaithamby, Aroumougame, Blattnig, Steve R., Costes, Sylvain V., Doetsch, Paul W., Dynan, William S., Hahnfeldt, Philip, Hlatky, Lynn, Kidane, Yared, Kronenberg, Amy et al. · 2016 · Life Sciences in Space Research
63. Using the Reactome Database
    Robin Haw, Lincoln David Stein · 2012 · Current Protocols in Bioinformatics
64. A community-curated consensual annotation that is continuously updated: the Bacillus subtilis centred wiki SubtiWiki
    Lope A. Flórez, Sebastian Roppel, Arne Schmeisky, Christoph R. Lammers, Jörg Stülke · 2009 · Database
65. Defining bacterial regulons using ChIP-seq
    Kevin S. Myers, Dan M. Park, Nicole A. Beauchene, Patricia J. Kiley · 2015 · Methods
66. Connecting parts with processes: SubtiWiki and SubtiPathways integrate gene and pathway annotation for Bacillus subtilis
    Christoph R. Lammers, Lope A. Flórez, Arne Schmeisky, Sebastian Roppel, Ulrike Mäder, Leendert Willem Hamoen, Jörg Stülke · 2009 · Microbiology
67. Understanding Cytotoxicity and Cytostaticity in a High-Throughput Screening Collection
    Lewis Mervin, Qing Cao, Ian P. Barrett, Mike A. Firth, David Murray, Lisa J. McWilliams, Malcolm Haddrick, Mark J Wigglesworth, Ola Engkvist, Andreas Bender · 2016 · ACS Chemical Biology
68. Wikipedia Research and Tools: Review and Comments
    Finn Årup Nielsen · 2012 · SSRN Electronic Journal
69. Interpretable meta-learning of multi-omics data for survival analysis and pathway enrichment
    Cho, Hyun Jae, Shu, Mia, Bekiranov, Stefan, Zang, Chongzhi, Zhang, Aidong · 2023 · Bioinformatics
70. PathBank 2.0—the pathway database for model organism metabolomics
    David Scott Wishart, Ray Kruger, Aadhavya Sivakumaran, Karxena Harford, Selena Sanford, Rahil Doshi, Nitya Khetarpal, Omolola Fatokun, Daphnee Doucet, Ashley Zubkowski et al. · 2023 · Nucleic Acids Research
71. Utility of network integrity methods in therapeutic target identification
    Qian Peng, Nicholas J. Schork · 2014 · Frontiers in Genetics
72. Improving the description of metabolic networks: the TCA cycle as example
    Miranda D. Stobbe, Sander M. Houten, Antoine H. C. van Kampen, Ronald J. A. Wanders, Perry D. Moerland · 2012 · The FASEB Journal
73. Using prior knowledge from cellular pathways and molecular networks for diagnostic specimen classification
    Enrico Glaab · 2015 · Briefings in Bioinformatics
74. Gene expression study of monocytes/macrophages during early foreign body reaction and identification of potential precursors of myofibroblasts
    Mesure, Lindsay, De Visscher, Geofrey, Vranken, Ilse, Lebacq, An, Flameng, Willem · 2010 · PLoS ONE
75. hiPathDB: a human-integrated pathway database with facile visualization
    N. Yu, Jung-Woo Seo, Kyoohyoung Rho, Yeongjun Jang, J. Park, Wankyu Kim, Sunghoon Lee · 2011 · Nucleic Acids Research
76. Social engineering for virtual 'big science' in systems biology
    Hiroaki Kitano, Samik Ghosh, Yukiko Matsuoka · 2011 · Nature Chemical Biology
77. Pharmacokinetics and effects of tetrabromobisphenol a (TBBPA) to early life stages of zebrafish (Danio rerio)
    Hongling Liu, Zhiyuan Ma, Tao Zhang, Nanyang Yu, Guanyong Su, John Paul Giesy, Hongxia Yu · 2017 · Chemosphere
78. Using random walks to identify cancer-associated modules in expression data
    Deanna Petrochilos, Ali Shojaie, John H. Gennari, Neil F. Abernethy · 2013 · BioData Mining
79. Biotransformation pathway maps in WikiPathways enable direct visualization of drug metabolism related expression changes
    Danyel G. J. Jennen, Stan Gaj, Pieter Giesbertz, Joost H.M. van Delft, Chris T. Evelo, Jos C. S. Kleinjans · 2010 · Drug Discovery Today
80. Bioinformatics approaches for the functional interpretation of protein lists: From ontology term enrichment to network analysis
    Kris Laukens, Stefan Naulaerts, Wim Vanden Berghe · 2014 · PROTEOMICS
81. 3DSwap: curated knowledgebase of proteins involved in 3D domain swapping
    Khader Shameer, Prashant Shingate, S. C. P. Manjunath, M. Karthika, Ganesan Pugalenthi, Ramanathan Sowdhamini · 2011 · Database
82. CoPub update: CoPub 5.0 a text mining system to answer biological questions
    Wilco W. M. Fleuren, Stefan Verhoeven, Raoul Frijters, B. Heupers, Jan E. M. Polman, Rik van Schaik, Jakob de Vlieg, Wynand B. L. Alkema · 2011 · Nucleic Acids Research
83. Cross‐sectional serum metabolomic study of multiple forms of muscular dystrophy
    Pietro Spitali, Kristina Maria Hettne, Roula Tsonaka, Ekrem Sabir, Alexandre Seyer, Jesse Hemerik, Jelle J. Goeman, Esther Picillo, Manuela Ergoli, Luisa Politano et al. · 2018 · Journal of Cellular and Molecular Medicine
84. YTPdb: A wiki database of yeast membrane transporters
    Sylvain Brohée, Roland Barriot, Yves Moreau, Bruno André · 2010 · Biochimica et Biophysica Acta (BBA) - Biomembranes
85. Challenges and Limitations of Biological Network Analysis
    Marianna Milano, Giuseppe Agapito, Mario Cannataro · 2022 · BioTech
86. Patient iPSC models reveal glia-intrinsic phenotypes in multiple sclerosis
    Clayton, Benjamin L.L., Barbar, Lilianne, Sapar, Maria, Kalpana, Kriti, Rao, Chandrika, Migliori, Bianca, Rusielewicz, Tomasz, Paull, Daniel, Brenner, Katie, Moroziewicz, Dorota et al. · 2024 · Cell Stem Cell
87. CMS: A Web-Based System for Visualization and Analysis of Genome-Wide Methylation Data of Human Cancers
    Fei Gu, Mark S. Doderer, Yi‐Wen Huang, Juan Carlos Roa, Paul J. Goodfellow, E. Lynette Kizer, Tim H.‐M. Huang, Yidong Chen · 2013 · PLoS ONE
88. Marginal selenium deficiency down-regulates inflammation-related genes in splenic leukocytes of the mouse
    Anna Patricia Kipp, Antje Banning, Evert M. van Schothorst, Catherine Méplan, Susan L. Coort, Chris T. Evelo, Jaap Keijer, John E. Hesketh, Regina Brigelius‐Flohé · 2011 · The Journal of Nutritional Biochemistry
89. Intervention Approaches in Studying the Response to Vitamin D3 Supplementation
    Emilia Gospodarska, Ranjini Ghosh Dastidar, Carsten Carlberg · 2023 · Nutrients
90. Network‐Based Approaches for Pathway Level Analysis
    Tin Nguyen, Cristina Mitrea, Sorin Drăghici · 2018 · Current Protocols in Bioinformatics
91. Novel ecological and climatic conditions drive rapid adaptation in invasive Florida Burmese pythons
    Daren C. Card, Blair W. Perry, Richard H. Jr. Adams, Drew R. Schield, Acacia S. Young, Audra L. Andrew, Tereza Ježková, Giulia Irene Maria Pasquesi, Nicole R. Hales, Matthew Walsh et al. · 2018 · Molecular Ecology
92. Pathway information extracted from 25 years of pathway figures
    Kristina Hanspers, Anders Riutta, Martina Kutmon, Alexander R. Pico · 2020 · Genome biology
93. Community Code Engagements
    Erik H. Trainer, Chalalai Chaihirunkarn, Arun Kalyanasundaram, James D. Herbsleb · 2014 · International ACM SIGGROUP Conference on Supporting Group Work (GROUP)
94. Construction of a large scale integrated map of macrophage pathogen recognition and effector systems
    Sobia Raza, N. A. McDerment, Paul A Lacaze, Kevin A. Robertson, Steven Watterson, Ying Chen, Michael Chisholm, George Eleftheriadis, Stephanie L. Monk, Maire O'Sullivan et al. · 2010 · BMC Systems Biology
95. Proteome Profile of Starch Granules Purified from Rice (Oryza sativa) Endosperm
    Shihai Xing, Xiaoxi Meng, Lihui Zhou, Hana Mujahid, Chunfang Zhao, Yadong Zhang, Cailin Wang, Zhaohua Peng · 2016 · PLoS ONE
96. Integrating literature-constrained and data-driven inference of signalling networks
    Federica Eduati, Javier De Las Rivas, Barbara Di Camillo, GIANNA MARIA TOFFOLO, Julio Sáez-Rodríguez · 2012 · Bioinformatics
97. Quantitative Single-Cell Proteomics as a Tool to Characterize Cellular Hierarchies
    Erwin M. Schoof, Benjamin Furtwängler, Nil Üresin, Nicolas Rapin, Simonas Savickas, Coline Gentil, Eric R. Lechman, Ulrich auf dem Keller, John Edgar Dick, Bo Torben Porse · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
98. In silico investigations identified Butyl Xanalterate to competently target CK2α (CSNK2A1) for therapy of chronic lymphocytic leukemia
    Suliman Abdallah Alsagaby, Danish Iqbal, Iqrar Ahmad, Harun Patel, Shabir Ahmad Mir, Yahya Madkhali, Atif Abdulwahab A. Oyouni, Yousef MohammedRabaa Hawsawi, Fahad Abdulrahman Alhumaydhi, Bader Alshehri et al. · 2022 · Scientific Reports
99. Systems biology analysis of protein‐drug interactions
    Jacques Colinge, Uwe Rix, Keiryn L. Bennett, Giulio Superti‐Furga · 2011 · PROTEOMICS - CLINICAL APPLICATIONS
100. The systems biology format converter
     Nicolás Rodríguez, Jean‐Baptiste Pettit, Piero Dalle Pezze, Lu Li, Arnaud Henry, Martijn van Iersel, Gaël Jalowicki, Martina Kutmon, Kedar Nath Natarajan, David Tolnay et al. · 2016 · BMC Bioinformatics