Anatomical characterization of human fetal brain development with diffusion tensor magnetic resonance imaging
Open accessAbstract
The human brain is extraordinarily complex, and yet its origin is a simple tubular structure. Characterizing its anatomy at different stages of human fetal brain development not only aids in understanding this highly ordered process but also provides clues to detecting abnormalities caused by genetic or environmental factors. During the second trimester of human fetal development, neural structures in the brain undergo significant morphological changes. Diffusion tensor imaging (DTI), a novel method of magnetic resonance imaging, is capable of delineating anatomical components with high contrast and revealing structures at the microscopic level. In this study, high-resolution and high-signal-to-noise-ratio DTI data of fixed tissues of second-trimester human fetal brains were acquired and analyzed. DTI color maps and tractography revealed that important white matter tracts, such as the corpus callosum and uncinate and inferior longitudinal fasciculi, become apparent during this period. Three-dimensional reconstruction shows that major brain fissures appear while most of the cerebral surface remains smooth until the end of the second trimester. A dominant radial organization was identified at 15 gestational weeks, followed by both laminar and radial architectures in the cerebral wall throughout the remainder of the second trimester. Volumetric measurements of different structures indicate that the volumes of basal ganglia and ganglionic eminence increase along with that of the whole brain, while the ventricle size decreases in the later second trimester. The developing fetal brain DTI database presented can be used for education, as an anatomical research reference, and for data registration.
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Using ex vivo dMRI on fetal brain samples, major tract parts of the fornix and cingulum bundles are identifiable at 13 weeks, and a part of the corpus callosum at 15 weeks.
“For instance, using ex vivo dMRI scans on fetal brain samples, researchers are able to identify the major tract parts of the fornix and cingulum bundles at 13 weeks, but a part of the corpus callosum at 15 weeks (Huang et al., 2009).”
From Quantitative mapping of the brain’s structural connectivity using diffusion MRI tractography: A review (2022) · cites this paper as Huang et al., 2009
The Results (White matter tracts) say the fornix is appreciable as a major tract at 13 weeks and the corpus callosum appears at 15 weeks. But they say the cingulum bundle can be traced only after 17 weeks, not at 13 weeks. The supplied passages do not give page numbers. (LLM, conf=0.93)
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Cites
Le Bihan, D., Breton, E., Lallemand, D., Grenier, P., Cabanis, E., & Laval-Jeantet, M. (1986) · Radiology · doi:10.1148/radiology.161.2.3763909 · Cited by 3,912 · see citing works
Specification of Cerebral Cortical Areas
Rakic, P. (1988) · Science · doi:10.1126/science.3291116 · Cited by 3,127 · see citing works
Diffusion Tensor Imaging and Axonal Tracking in the Human Brainstem
Stieltjes, B., Kaufmann, W. E., van Zijl, P. C. M., Fredericksen, K., Pearlson, G. D., Solaiyappan, M., & Mori, S. (2001) · NeuroImage · doi:10.1006/nimg.2001.0861 · Cited by 492 · see citing works
Self-citationDiffusion tensor imaging of normal and injured developing human brain-a technical review
Neil, J., Miller, J., Mukherjee, P., & Hüppi, P. S. (2002) · NMR in Biomedicine · doi:10.1002/nbm.784 · Cited by 402 · cited 1× · see citing works
“…based on relaxation parameters, this technology has superior contrast to delineate the anatomy of premyelinated brains (Hüppi et al., 1998, 2001; Neil et al., 1998, 2002; McKinstry et al., 2002; Miller et al., 2002b; Mukherjee et al., 2002; Zhang et al., 2003; Maas et al., 2004; Partridge et…”
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Research works printed but not linked: 39
- Basser PJ Mattiello J LeBihan D Estimation of the effective self-diffusion tensor from the NMR spin echo J Magn Reson B 1994 103 247 254 8019776
- Catani M Howard RJ Pajevic S Jones DK Virtual in vivo interactive dissection of white matter fasciculi in the human brain Neuroimage 2002 17 77 94 12482069
- Deipolyi AR Mukherjee P Gill K Henry RG Partridge SC Veeraraghavan S Jin H Lu Y Miller SP Ferriero DM Vigneron DB Barkovich AJ Comparing microstructural and macrostructural development of the cerebral cortex in premature newborns: diffusion tensor imaging versus cortical gyration Neuroimage 2005 27 579 586 15921934
- Hermoye L Saint-Martin C Cosnard G Lee SK Kim J Nassogne MC Menten R Clapuyt P Donohue PK Hua K Wakana S Jiang H van Zijl PC Mori S Pediatric diffusion tensor imaging: normal database and observation of the white matter maturation in early childhood Neuroimage 2006 29 493 504 16194615
- Honig LS Herrmann K Shatz CJ Developmental changes revealed by immunohistochemical markers in human cerebral cortex Cereb Cortex 1996 6 794 806 8922336
- Huang H Zhang J Wakana S Zhang W Ren T Richards LJ Yarowsky P Donohue P Graham E van Zijl PC Mori S White and gray matter development in human fetal, newborn and pediatric brains Neuroimage 2006b 33 27 38 16905335
- Hüppi PS Maier SE Peled S Zientara GP Barnes PD Jolesz FA Volpe JJ Microstructural development of human newborn cerebral white matter assessed in vivo by diffusion tensor magnetic resonance imaging Pediatr Res 1998 44 584 590 9773850
- Hüppi PS Murphy B Maier SE Zientara GP Inder TE Barnes PD Kikinis R Jolesz FA Volpe JJ Microstructural brain development after perinatal cerebral white matter injury assessed by diffusion tensor magnetic resonance imaging Pediatrics 2001 107 455 460 11230582
- Jiang H van Zijl PC Kim J Pearlson GD Mori S DtiStudio: resource program for diffusion tensor computation and fiber bundle tracking Comput Methods Programs Biomed 2006 81 106 116 16413083
- Kinoshita Y Okudera T Tsuru E Yokota A Volumetric analysis of the germinal matrix and lateral ventricles performed using MR images of postmortem fetuses AJNR Am J Neuroradiol 2001 22 382 388 11156787 PMC7973932
- Kostović I Judas M Rados M Hrabac P Laminar organization of the human fetal cerebrum revealed by histochemical markers and magnetic resonance imaging Cereb Cortex 2002 12 536 544 11950771
- Kroenke CD Bretthorst GL Inder TE Neil JJ DiffusionMRimaging characteristics of the developing primate brain Neuroimage 2005 25 1205 1213 15850738
- Kroenke CD Van Essen DC Inder TE Rees S Bretthorst GL Neil JJ Microstructural changes of the baboon cerebral cortex during gestational development reflected in magnetic resonance imaging diffusion anisotropy J Neurosci 2007 27 12506 12515 18003829 PMC4780575
- Lee SK Kim DI Kim J Kim DJ Kim HD Kim DS Mori S Diffusion-tensor MR imaging and fiber tractography: a new method of describing aberrant fiber connections in developmental CNS anomalies Radio-graphics 2005 25 53 65 discussion 66–68 15653586
- Maas LC Mukherjee P Carballido-Gamio J Veeraraghavan S Miller SP Partridge SC Henry RG Barkovich AJ Vigneron DB Early laminar organization of the human cerebrum demonstrated with diffusion tensor imaging in extremely premature infants Neuroimage 2004 22 1134 1140 15219585
- Makris N Worth AJ Sorensen AG Papadimitriou GM Wu O Reese TG Wedeen VJ Davis TL Stakes JW Caviness VS Kaplan E Rosen BR Pandya DN Kennedy DN Morphometry of in vivo human white matter association pathways with diffusion weighted magnetic resonance imaging Ann Neurol 1997 42 951 962 9403488
- McKinstry RC Mathur A Miller JH Ozcan A Snyder AZ Schefft GL Almli CR Shiran SI Conturo TE Neil JJ Radial organization of developing preterm human cerebral cortex revealed by non-invasive water diffusion anisotropy MRI Cereb Cortex 2002 12 1237 1243 12427675
- Miller MI Trouve A Younes L On the metrics and Euler-Lagrange equations of computational anatomy Annu Rev Biomed Eng 2002a 4 375 405 12117763
- Miller SP Vigneron DB Henry RG Bohland MA Ceppi-Cozzio C Hoffman C Newton N Partridge JC Ferriero DM Barkovich AJ Serial quantitative diffusion tensor MRI of the premature brain: development in newborns with and without injury J Magn Reson Imaging 2002b 16 621 632 12451575
- Mori S Crain BJ Chacko VP van Zijl PCM Three dimensional tracking of axonal projections in the brain by magnetic resonance imaging Ann Neurol 1999 45 265 269 9989633
- Mori S Wakana S Nagae-Poetscher LM van Zijl PC MRI atlas of human white matter 2005 Amsterdam Elsevier 14645885
- Moseley ME Cohen Y Kucharczyk J Mintorovitch J Asgari HS Wendland MF Tsuruda J Norman D Diffusion-weighted MR imaging of anisotropic water diffusion in cat central nervous system Radiology 1990 176 439 445 2367658
- Mountcastle VB The columnar organization of the neocortex Brain 1997 120 701 722 9153131
- Mukherjee P Miller JH Shimony JS Philip JV Nehra D Snyder AZ Conturo TE Neil JJ McKinstry RC Diffusion-tensor MR imaging of gray and white matter development during normal human brain maturation AJNR Am J Neuroradiol 2002 23 1445 1456 12372731 PMC7976805
- Neil JJ Shiran SI McKinstry RC Schefft GL Snyder AZ Almli CR Akbudak E Aronovitz JA Miller JP Lee BC Conturo TE Normal brain in human newborns: apparent diffusion coefficient and diffusion anisotropy measured by using diffusion tensor MR imaging Radiology 1998 209 57 66 9769812
- O’Rahilly RR Muller F The embryonic human brain: an atlas of developmental stages 1999 New York Wiley
- Partridge SC Mukherjee P Henry RG Miller SP Berman JI Jin H Lu Y Glenn OA Ferriero DM Barkovich AJ Vigneron DB Diffusion tensor imaging: serial quantitation of white matter tract maturity in premature newborns Neuroimage 2004 22 1302 1314 15219602
- Pierpaoli C Basser PJ Toward a quantitative assessment of diffusion anisotropy Magn Reson Med 1996 36 893 906 8946355
- Rados M Judas M Kostović I In vitro MRI of brain development Eur J Radiol 2006 57 187 198 16439088
- Rakic P Mode of cell migration to the superficial layers of fetal monkey neocortex J Comp Neurol 1972 145 61 83 4624784
- Ren T Anderson A Shen WB Huang H Plachez C Zhang J Mori S Kinsman SL Richards LJ Imaging, anatomical, and molecular analysis of callosal formation in the developing human fetal brain Anat RecADiscov Mol Cell Evol Biol 2006 288 191 204 16411247
- Schneider JF Il’yasov KA Hennig J Martin E Fast quantitative diffusion-tensor imaging of cerebral white matter from the neonatal period to adolescence Neuroradiology 2004 46 258 266 14999435
- Sidman RL Rakic P Neuronal migration, with special reference to developing human brain: a review Brain Res 1973 62 1 35 4203033
- Volpe JJ Neurobiology of periventricular leukomalacia in the premature infant Pediatr Res 2001 50 553 562 11641446
- Wakana S Jiang H Nagae-Poetscher LM van Zijl PC Mori S Fiber tract-based atlas of human white matter anatomy Radiology 2004 230 77 87 14645885
- Wakana S Caprihan A Panzenboeck MM Fallon JH Perry M Gollub RL Hua K Zhang J Jiang H Dubey P Blitz A van Zijl PCM Mori S Reproducibility of quantitative tractography methods applied to cerebral white matter Neuroimage 2007 36 630 644 17481925 PMC2350213
- Woods RP Grafton ST Holmes CJ Cherry SR Mazziotta JC Automated image registration: I. General methods and intrasubject, intramodality validation J Comput Assist Tomogr 1998 22 139 152 9448779
- Zhang J Richards LJ Yarowsky P Huang H van Zijl PC Mori S Three-dimensional anatomical characterization of the developing mouse brain by diffusion tensor microimaging Neuroimage 2003 20 1639 1648 14642474
- Zhang J Evans A Hermoye L Lee SK Wakana S Zhang W Donohue P Miller MI Huang H Wang X van Zijl PCM Mori S Evidence of slow maturation of the superior longitudinal fasciculus in early childhood by diffusion tensor imaging Neuroimage 2007 38 239 247 17826183 PMC2694744
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- Authors
- Huang, H., Xue, R., Zhang, J., Ren, T., Richards, L. J., Yarowsky, P., Miller, M. I., & Mori, S.
- Affiliations
- Johns Hopkins University (US)
- Chinese Academy of Sciences (CN)
- The University of Texas Southwestern Medical Center (US)
- Kennedy Krieger Institute (US)
- The University of Queensland (AU)
- University of Maryland, Baltimore (US)
- ORCID
- Venue
- The Journal of Neuroscience
- Publisher
- Society for Neuroscience
- Published
- 2009-04-01
- Volume
- 29
- Issue
- 13
- Pages
- 4263-4273
- ISSN
- 0270-6474 (ISSN-L)
- 1529-2401
- PMC
- PMC2721010
- OpenAlex
- W2095064889
- Cited by
- 364
- References
- 4
- Citations by year
- 2026: 14 · 2025: 18 · 2024: 16 · 2023: 27 · 2022: 23 · 2021: 33 · 2020: 20 · 2019: 26 · 2018: 20 · 2017: 23 · 2016: 11 · 2015: 26 · 2014: 29 · 2013: 23 · 2012: 14
- FWCI
- 13.85
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Journal of Neuroscience (publishedVersion, cc-by-nc-sa)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Institutes of Health
- Medical Research Council
- National Health and Medical Research Council
- National Institute on Aging (R01AG020012, AG 20012)
- National Institute of Neurological Disorders and Stroke (R21NS045841, NS45841)
- National Institute of Biomedical Imaging and Bioengineering (R01EB003543, EB 003543)
- Topics
- Health Sciences › Medicine › Radiology, Nuclear Medicine and Imaging › Advanced Neuroimaging Techniques and Applications
- Health Sciences › Medicine › Pediatrics, Perinatology and Child Health › Fetal and Pediatric Neurological Disorders
- Health Sciences › Medicine › Radiology, Nuclear Medicine and Imaging › Advanced MRI Techniques and Applications
- Keywords
- fetal brain development, second trimester, white matter tracts, corpus callosum, uncinate fasciculus, inferior longitudinal fasciculus, basal ganglia, ganglionic eminence, ventricular size, diffusion tensor imaging, tractography
- MeSH terms
- Brain, Brain Mapping, Fetus, Gestational Age, Humans, Postmortem Changes, Imaging, Three-Dimensional, Diffusion Magnetic Resonance Imaging
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