Identifying miRNA-mRNA regulation network of major depressive disorder in ovarian cancer patients.
Open accessAbstract
Major depression disorder (MDD) has become increasingly common in patients with ovarian cancer, which complicates the treatment course. The microRNA (miRNA)-mRNA regulation network may help elucidate the potential mechanism of MDD in ovarian cancer. The differentially expressed microRNAs (DEmiRs) and mRNAs (DEmRNAs) were therefore identified from the GSE61741, GSE58105 and GSE9116 ovarian cancer datasets using GEO2R. The target genes of the DEmiRs were then obtained using the TargetScan, microRNAorg, microT-CDS, miRDB and miRTarBase prediction tools. The DAVID program was used to identify the KEGG pathways of target genes, and the core genes of major depressive disorder (MDD) were identified using the Kaplan-Meier Plotter for ovarian cancer. A total of 5 DEmiRs (miR-23b-3p, miR-33b-3p, miR-1265, miR-933 and miR-629-5p) were obtained from GSE61741 and GSE58105. The target genes of these DEmiRs were enriched in pathways that were considered high risk for developing MDD in ovarian cancer. A total of 11 risk genes were selected from these pathways as the core genes in the miRNA-mRNA network of MDD in ovarian cancer, and eventually identified the following 12 miRNA-mRNAs pairs: miR-629-5p-FGF1, miR-629-5p-AKT3, miR-629-5p-MAGI2, miR-933-BDNF, miR-933-MEF2A, miR-23b-3p-TJP1, miR-23b-3p-JMJD1, miR-23b-3p-APAF1, miR-23b-3p-CAB39, miR-1265-CDKN1B, miR-33b-3p-CDKN1B, and miR-33b-3p-F2R. These results may provide novel insights into the mechanisms of developing MDD in ovarian cancer patients.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In MMD, miRNAs are associated with depression caused by various illnesses and with response to specific treatments such as isoliquiritin, oligonucleotides, or purinergic receptor.
“In MMD, it has been reported that miRNAs are not only involved in the pathogenesis of the disease [17], but are also associated with depression caused by various illnesses [18, 19], as well as the response to specific treatments such as isoliquiritin [20], oligonucleotides [21], or purinergic receptor [22], confirming their potential as disease monitoring biomarkers.”
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
Gene Ontology: tool for the unification of biology
Ashburner, M., Ball, C. A., Blake, J. A., Botstein, D., Butler, H., Cherry, J. M., Davis, A. P., Dolinski, K., Dwight, S. S., Eppig, J. T., et al. (2000) · Nature Genetics · doi:10.1038/75556 · Cited by 43,206 · see citing works
KEGG: Kyoto Encyclopedia of Genes and Genomes
Kanehisa, M. (2000) · Nucleic Acids Research · doi:10.1093/nar/28.1.27 · Cited by 37,077 · see citing works
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
Huang, D. W., Sherman, B. T., & Lempicki, R. A. (2009) · Nature Protocols · doi:10.1038/nprot.2008.211 · Cited by 35,890 · see citing works
KEGG: Kyoto Encyclopedia of Genes and Genomes
Ogata, H., Goto, S., Sato, K., Fujibuchi, W., Bono, H., & Kanehisa, M. (1999) · Nucleic Acids Research · doi:10.1093/nar/27.1.29 · Cited by 31,232 · see citing works
Huang, D. W., Sherman, B. T., & Lempicki, R. A. (2009) · Nucleic Acids Research · doi:10.1093/nar/gkn923 · Cited by 14,108 · see citing works
Prevalence of depression in patients with cancer
Massie, M. J. (2004) · Journal of the National Cancer Institute Monographs · doi:10.1093/jncimonographs/lgh014 · Cited by 1,408 · see citing works
Ketamine blocks bursting in the lateral habenula to rapidly relieve depression
Yang, Y., Cui, Y., Sang, K., Dong, Y., Ni, Z., Ma, S., & Hu, H. (2018) · Nature · doi:10.1038/nature25509 · Cited by 1,036 · see citing works
Győrffy, B., Lánczky, A., & Szállási, Z. (2012) · Endocrine Related Cancer · doi:10.1530/erc-11-0329 · Cited by 970 · see citing works
Astroglial Kir4.1 in the lateral habenula drives neuronal bursts in depression
Cui, Y., Yang, Y., Ni, Z., Dong, Y., Cai, G., Foncelle, A., Ma, S., Sang, K., Tang, S., Li, Y., et al. (2018) · Nature · doi:10.1038/nature25752 · Cited by 597 · see citing works
Polyakova, M., Stuke, K., Schuemberg, K., Mueller, K., Schoenknecht, P., & Schroeter, M. L. (2015) · Journal of Affective Disorders · doi:10.1016/j.jad.2014.11.044 · Cited by 488 · see citing works
Somatic activation of AKT3 causes hemispheric developmental brain malformations
Poduri, A., Evrony, G. D., Cai, X., Elhosary, P. C., Beroukhim, R., Lehtinen, M. K., Hills, L. B., Heinzen, E. L., Hill, A., Hill, R. S., et al. (2012) · Neuron · doi:10.1016/j.neuron.2012.03.010 · Cited by 478 · see citing works
Taliaz, D., Stall, N., Dar, D. E., & Zangen, A. (2010) · Molecular Psychiatry · doi:10.1038/mp.2009.67 · Cited by 454 · see citing works
Dwivedi, Y., Rizavi, H. S., Roberts, R. C., Conley, R. C., Tamminga, C. A., & Pandey, G. N. (2001) · Journal of Neurochemistry · doi:10.1046/j.1471-4159.2001.00300.x · Cited by 333 · see citing works
Depression, Anxiety, and Quality of Life in Patients with Epithelial Ovarian Cancer
Bodurka, D. C., Basen-Engquist, K. M., Carmack, C. L., Fitzgerald, M. A., Wolf, J. K., de Moor, C., & Gershenson, D. M. (2000) · Gynecologic Oncology · doi:10.1006/gyno.2000.5908 · Cited by 312 · see citing works
Hirao, K., Hata, Y., Ide, N., Takeuchi, M., Irie, M., Yao, I., Deguchi, M., Toyoda, A., Südhof, T. C., & Takai, Y. (1998) · Journal of Biological Chemistry · doi:10.1074/jbc.273.33.21105 · Cited by 293 · see citing works
PI3K/AKT/mTOR signaling pathway as a therapeutic target for ovarian cancer
Li, H., Zeng, J., & Shen, K. (2014) · Archives of Gynecology and Obstetrics · doi:10.1007/s00404-014-3377-3 · Cited by 203 · see citing works
Recent Developments in Anti-Cancer Agents Targeting the Ras/Raf/ MEK/ERK Pathway
Wong, K. (2008) · Recent Patents on Anti-Cancer Drug Discovery · doi:10.2174/157489209787002461 · Cited by 150 · see citing works
Price, M. A., Butow, P. N., Costa, D. S. J., King, M. T., Aldridge, L. J., Fardell, J. E., DeFazio, A., & Webb, P. M. (2010) · Medical Journal of Australia · doi:10.5694/j.1326-5377.2010.tb03929.x · Cited by 116 · see citing works
Bachis, A., Mallei, A., Cruz, M. I., Wellstein, A., & Mocchetti, I. (2008) · Neuropharmacology · doi:10.1016/j.neuropharm.2008.07.014 · Cited by 96 · see citing works
The AKT genes and their roles in various disorders
Cohen, M. M. (2013) · American Journal of Medical Genetics Part A · doi:10.1002/ajmg.a.36101 · Cited by 95 · see citing works
The role of ventral striatal cAMP signaling in stress-induced behaviors
Plattner, F., Hayashi, K., Hernández, A., Benavides, D. R., Tassin, T. C., Tan, C., Day, J., Fina, M. W., Yuen, E. Y., Yan, Z., et al. (2015) · Nature Neuroscience · doi:10.1038/nn.4066 · Cited by 94 · see citing works
Ding, L., Zhang, C., Masood, A., Li, J., Sun, J., Nadeem, A., Zhang, H., O’Donnell, J. M., & Xu, Y. (2014) · Behavioural Brain Research · doi:10.1016/j.bbr.2014.03.042 · Cited by 82 · see citing works
Renaud, F., Desset, S., Oliver, L., Giménez‐Gallego, G., OBBERGHEN, E. V., Courtois, Y., & Laurent, M. (1996) · Journal of Biological Chemistry · doi:10.1074/jbc.271.5.2801 · Cited by 68 · see citing works
MAGI-2 Inhibits cell migration and proliferation via PTEN in human hepatocarcinoma cells
Hu, Y., Li, Z., Guo, L., Wang, L., Zhang, L., Cai, X., Zhao, H., & Zha, X. (2007) · Archives of Biochemistry and Biophysics · doi:10.1016/j.abb.2007.07.027 · Cited by 66 · see citing works
Three Isoforms of Synaptic Scaffolding Molecule and Their Characterization
Hirao, K., Hata, Y., Yao, I., Deguchi, M., Kawabe, H., Mizoguchi, A., & Takai, Y. (2000) · Journal of Biological Chemistry · doi:10.1074/jbc.275.4.2966 · Cited by 65 · see citing works
Understanding and treating depression among cancer patients
Bailey, R. K., Geyen, D. J., Scott-Gurnell, K., Hipolito, M. M. S., Bailey, T. A., & Beal, J. M. (2005) · International Journal of Gynecological Cancer · doi:10.1111/j.1525-1438.2005.15204.x · Cited by 56 · see citing works
Jiao, J., Zhao, X., Liang, Y., Tang, D., & Pan, C. (2015) · Biochemical and Biophysical Research Communications · doi:10.1016/j.bbrc.2015.09.021 · Cited by 42 · see citing works
Targeting protein kinase-b3 (akt3) signaling in melanoma
Madhunapantula, S. V., & Robertson, G. P. (2017) · Expert Opinion on Therapeutic Targets · doi:10.1080/14728222.2017.1279147 · Cited by 25 · see citing works
Wu, M. C., Chen, Y., Jiang, L., LI, Y., Lan, T., Wang, Y., & Qian, H. (2013) · Oncology Letters · doi:10.3892/ol.2013.1630 · Cited by 20 · see citing works
Karami‐Tehrani, F., Fallahian, F., & Atri, M. (2012) · Tumor Biology · doi:10.1007/s13277-012-0453-9 · Cited by 18 · see citing works
Yeganeh, P. N., Richardson, C. A., Bahrani-Mostafavi, Z., Tait, D. L., & Mostafavi, M. T. (2017) · Genes & Cancer · doi:10.18632/genesandcancer.164 · Cited by 15 · see citing works
Yan, T., GU, Y.-J., CAO, Z.-H., BIAN, X.-J., Lan, T., Sang, J., Jiang, L., Wang, Y., Qian, H., & Chen, Y. (2012) · Oncology Letters · doi:10.3892/ol.2012.851 · Cited by 14 · see citing works
Pharmacokinetics and pharmacodynamics of mood-altering drugs in patients with cancer
Lovejoy, N. C., & Matteis, M. (1996) · Cancer Nursing · doi:10.1097/00002820-199612000-00001 · Cited by 9 · see citing works
Flagged first, then by citations
Research works printed but not linked: 1
- [16]Dwivedi Y Rizavi HS Roberts RC Conley RC Tamminga CA Pandey GN Reduced activation and expression of ERK1/2 MAP kinase in the post-mortem brain of depressed suicide subjects J Neurochem 77 916 928 2001 10.1046/j.1471-4159.2001.00300.x 11331420 · DOI
Cited by
Sorted by citations
Wei, Z.-X., Xie, G.-J., Mao, X., Zou, X.-P., Liao, Y.-J., Liu, Q.-S., Wang, H., & Cheng, Y. (2020) · Neuropsychopharmacology · doi:10.1038/s41386-020-0622-2 · Cited by 227 · see citing works
MicroRNA in Ovarian Cancer: Biology, Pathogenesis, and Therapeutic Opportunities
Chen, S., Chang, R., Lin, L., Chern, C.-U., Tsai, H., Wen, Z., Li, Y.-H., Li, C., & Tsui, K. (2019) · International Journal of Environmental Research and Public Health · doi:10.3390/ijerph16091510 · Cited by 123 · see citing works
Gruzdev, S. K., Yakovlev, A. A., Druzhkova, T. A., Guekht, A. B., & Gulyaeva, N. V. (2019) · Cellular and Molecular Neurobiology · doi:10.1007/s10571-019-00684-6 · Cited by 75 · see citing works
Construction of Potential miRNA–mRNA Regulatory Network in COPD Plasma by Bioinformatics Analysis
Zhu, M., Ye, M., Wang, J., Ye, L., & Jin, M. (2020) · International Journal of COPD · doi:10.2147/copd.s255262 · Cited by 62 · see citing works
Xu, Z., Li, Z., Wang, W., Xia, Y., He, Z., Li, B., Wang, S., Huang, X., Sun, G., Xu, J., et al. (2019) · Cancer Letters · doi:10.1016/j.canlet.2019.02.026 · Cited by 60 · see citing works
NEAT1/miR-23a-3p/KLF3: a novel regulatory axis in melanoma cancer progression
Ding, F., Lai, J., Gao, Y., Wang, G., Shang, J., Zhang, D., & Zheng, S. (2019) · Cancer Cell International · doi:10.1186/s12935-019-0927-6 · Cited by 59 · see citing works
Differential serum exosome microRNA profile in a stress-induced depression rat model
Fang, K., Xu, J., Chen, X.-X., Gao, X., Huang, L.-L., Du, A.-Q., Jiang, C., & Ge, J. (2020) · Journal of Affective Disorders · doi:10.1016/j.jad.2020.05.017 · Cited by 61 · see citing works
Ontologies and Knowledge Graphs in Oncology Research
Silva, M. C., Eugénio, P., Faria, D., & Pesquita, C. (2022) · Cancers · doi:10.3390/cancers14081906 · Cited by 46 · see citing works
CircMEG3 inhibits telomerase activity by reducing Cbf5 in human liver cancer stem cells
Jiang, X., Xing, L., Chen, Y., Qin, R., Song, S., Lu, Y., Xie, S., Wang, L., Pu, H., Gui, X., et al. (2020) · Molecular Therapy — Nucleic Acids · doi:10.1016/j.omtn.2020.11.009 · Cited by 45 · see citing works
Wu, Z., Cai, Z., Shi, H., Huang, X., Cai, M., Yuan, K., Huang, P., Shi, G., Yan, T., & Li, Z. (2022) · Aging · doi:10.18632/aging.204030 · Cited by 37 · see citing works
Treble‐Barna, A., Heinsberg, L. W., Stec, Z., Breazeale, S., Davis, T. S., Kesbhat, A., Chattopadhyay, A., VonVille, H. M., Ketchum, A., Yeates, K. O., et al. (2022) · Neuroscience & Biobehavioral Reviews · doi:10.1016/j.neubiorev.2023.105078 · Cited by 37 · see citing works
Dual-Channel Heterogeneous Graph Neural Network for Predicting microRNA-Mediated Drug Sensitivity
Deng, L., Fan, Z., Xiao, X., Liu, H., & Zhang, J. (2022) · Journal of Chemical Information and Modeling · doi:10.1021/acs.jcim.2c01060 · Cited by 26 · see citing works
A New Story of the Three Magi: Scaffolding Proteins and lncRNA Suppressors of Cancer
Kotelevets, L., & Chastre, E. (2021) · Cancers · doi:10.3390/cancers13174264 · Cited by 21 · see citing works
Zhang, C., & Ge, C. (2019) · BioMed Research International · doi:10.1155/2019/3526407 · Cited by 17 · see citing works
Rahman, M. R., Islam, T., Al-Mamun, M. A., Zaman, T., Karim, M. R., & Moni, M. A. (2019) · Informatics in Medicine Unlocked · doi:10.1016/j.imu.2019.100207 · Cited by 16 · see citing works
The core genes involved in the promotion of depression in patients with ovarian cancer
Yi, Y., Liu, Y., Wu, K., Wu, W., & Zhang, W. (2019) · Oncology Letters · doi:10.3892/ol.2019.10934 · Cited by 13 · see citing works
Zhang, Y., Chen, D., Zhang, G., Wu, X., Zhou, L.-Y., Lin, Y., Ding, J., An, F., & Zhan, Q. (2020) · Oncology Letters · doi:10.3892/ol.2020.12021 · Cited by 13 · see citing works
Qiu, H., Shen, L., Shen, Y. H., & Mao, Y. (2023) · Frontiers in Neurology · doi:10.3389/fneur.2023.1096911 · Cited by 11 · see citing works
Cai, H., Lin, H. M., Cao, W., Sun, J., Huang, Y., & Fang, Y. (2019) · PubMed Central · Cited by 9 · see citing works
MicroRNA-629-5p promotes osteosarcoma proliferation and migration by targeting caveolin 1
Gao, C., Gao, J., Zeng, G., Yan, H., Zheng, J., & Guo, W. (2021) · Brazilian Journal of Medical and Biological Research · doi:10.1590/1414-431x202010474 · Cited by 8 · see citing works
Shu, X., Chen, X., Kang, X.-D., Ran, M., Wang, Y.-L., Zhao, Z., & Li, C. (2022) · World Journal of Clinical Cases · doi:10.12998/wjcc.v10.i18.5965 · Cited by 6 · see citing works
Khetan, R., Lokman, N. A., Eldi, P., Price, Z. K., Oehler, M. K., Brooks, D. A., Blencowe, A., Garg, S., Ricciardelli, C., & Albrecht, H. (2025) · International Journal of Molecular Sciences · doi:10.3390/ijms26178529 · Cited by 4 · see citing works
Wang, J., Luo, J., Du, L., Shu, X., Guo, C., & Li, T. (2022) · Renal Failure · doi:10.1080/0886022x.2022.2091998 · Cited by 2 · see citing works
miR-2053 inhibits the growth of ovarian cancer cells by downregulating SOX4
Huang, X., Zhang, W., Shen, X., Ma, S., & Liu, L. (2023) · Open Medicine · doi:10.1515/med-2023-0667
Habiburrahman, M., & Flanagan, J. M. (2024) · SSRN Electronic Journal · doi:10.2139/ssrn.4951684
Yang, J., Luan, R., & Zhao, X. (2026) · International Journal of Radiation Research · doi:10.66224/ijrr.24.3.17
- Authors
- Wu, C., Zhao, Y., Liu, Y., Yang, X., Yan, M., Min, Y., Pan, Z., Qiu, S., Xia, S., Yu, J., Yang, P., Wan, B., & Shao, Q.
- Affiliations
- Nanjing Jiangning Hospital (CN)
- Jiangsu University (CN)
- Affiliated Hospital of Jiangsu University (CN)
- Corresponding author
- Wan, Bing
- Shao, Qixiang
- ORCID
- Venue
- Oncology Letters
- Publisher
- Spandidos Publications
- Published
- 2018-07-31
- Volume
- 16
- Issue
- 4
- Pages
- 5375-5382
- ISSN
- 1792-1074 (ISSN-L)
- 1792-1082
- PMC
- PMC6126176
- OpenAlex
- W2887243418
- Cited by
- 26
- References
- 33
- Citations by year
- 2026: 1 · 2025: 1 · 2024: 1 · 2023: 2 · 2022: 6 · 2021: 2 · 2020: 5 · 2019: 8
- FWCI
- 1.13
- Type
- journal article
- Language
- en
- Open access
- diamond
- doi.org
- Licence
- cc-by-nc-nd
- Locations
- Oncology Letters (publishedVersion, cc-by-nc-nd)
- Europe PMC (PubMed Central) (publishedVersion, other-oa)
- PubMed Central (publishedVersion, cc-by-nc-nd)
- PubMed (publishedVersion)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › MicroRNA in disease regulation
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › Cancer-related molecular mechanisms research
- Health Sciences › Medicine › Reproductive Medicine › Ovarian cancer diagnosis and treatment
- Keywords
- major depressive disorder, ovarian cancer, miRNA-mRNA regulatory network, differentially expressed miRNAs, miR-23b-3p
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review