Guidelines for the use and interpretation of assays for monitoring autophagy

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1. Mitochondria-Associated Membranes: Composition, Molecular Mechanisms, and Physiopathological Implications
   Carlotta Giorgi, Sonia Missiroli, Simone Patergnani, Jerzy Duszyński, Mariusz Roman Wieckowski, Paolo Pinton · 2015 · Antioxidants and Redox Signaling
2. The histone H4 lysine 16 acetyltransferase hMOF regulates the outcome of autophagy
   Jens Füllgrabe, Melinda A. Lynch-Day, Nina Heldring, Wenbo Li, Robin B. Struijk, Qi Ma, Ola Hermanson, Michael G. Rosenfeld, Daniel J. Klionsky, Bertrand Joseph · 2013 · Nature
3. Insufficient autophagy in idiopathic pulmonary fibrosis
   Jun Araya, Jun Kojima, Naoki Takasaka, Saburo Ito, Satoko Fujii, Hiromichi Hara, Haruhiko Yanagisawa, Kenji Kobayashi, Chikako Tsurushige, Makoto Kawaishi et al. · 2012 · American Journal of Physiology-Lung Cellular and Molecular Physiology
4. Coxsackievirus B Exits the Host Cell in Shed Microvesicles Displaying Autophagosomal Markers
   Robinson, Scott M., Tsueng, Ginger, Sin, Jon, Mangale, Vrushali, Rahawi, Shahad, McIntyre, Laura L., Williams, Wesley, Kha, Nelson, Cruz, Casey, Hancock, Bryan M. et al. · 2014 · PLoS Pathogens
5. The Role of the Selective Adaptor p62 and Ubiquitin-Like Proteins in Autophagy
   Mónika Lippai, Péter Lőw · 2014 · BioMed Research International
6. Defining and measuring autophagosome flux—concept and reality
   Ben Loos, André du Toit, Jan‐Hendrik S. Hofmeyr · 2014 · Autophagy
7. Sustained Activation of mTORC1 in Skeletal Muscle Inhibits Constitutive and Starvation-Induced Autophagy and Causes a Severe, Late-Onset Myopathy
   Castets, Perrine, Lin, Shuo, Rion, Nathalie, Di Fulvio, Sabrina, Romanino, Klaas, Guridi, Maitea, Frank, Stephan, Tintignac, Lionel A., Sinnreich, Michael, Rüegg, Markus A. · 2013 · Cell Metabolism
8. Self-renewal of a purified Tie2 + hematopoietic stem cell population relies on mitochondrial clearance
   Kyoko Ito, Raphaël Turcotte, Jinhua Cui, Samuel E. Zimmerman, Sandra Pinho, Toshihide Mizoguchi, Fumio Arai, Judith M. Runnels, Clemens Alt, Julie Teruya‐Feldstein et al. · 2016 · Science
9. Posttranslational modification of autophagy-related proteins in macroautophagy
   Yangchun Xie, Rui Kang, Xiaofang Sun, Meizuo Zhong, Jin Long Huang, Daniel J. Klionsky, Daolin Tang · 2014 · Autophagy
10. ROS-induced autophagy in cancer cells assists in evasion from determinants of immunogenic cell death
    Garg, Abhishek D., Dudek, Aleksandra M., Ferreira, Gabriela B., Verfaillie, Tom, Vandenabeele, Peter, Krysko, Dmitri V., Mathieu, Chantal, Agostinis, Patrizia · 2013 · Autophagy
11. Histone deacetylase 6–mediated selective autophagy regulates COPD-associated cilia dysfunction
    Lam, Hilaire C., Cloonan, Suzanne M., Bhashyam, Abhiram R., Haspel, Jeffery A., Singh, Anju, Sathirapongsasuti, J. Fah, Cervo, Morgan, Yao, Hongwei, Chung, Anna L., Mizumura, Kenji et al. · 2013 · Journal of Clinical Investigation
12. Why should autophagic flux be assessed?
    Xiao-Jie Zhang, Sheng Chen, Kai-xing Huang, Wei-Dong Le · 2013 · Acta Pharmacologica Sinica
13. AMPK Modulates Tissue and Organismal Aging in a Non-Cell-Autonomous Manner
    Matthew Ulgherait, Anil Rana, Michaël Rera, Jacqueline V. Graniel, David W. Walker · 2014 · Cell Reports
14. Punctate LC3B Expression Is a Common Feature of Solid Tumors and Associated with Proliferation, Metastasis, and Poor Outcome
    Lazova, Rossitza, Camp, Robert L., Klump, Vincent, Siddiqui, Summar F., Amaravadi, Ravi K., Pawelek, John M. · 2012 · Clinical Cancer Research
15. 3D graphene/δ-MnO 2 aerogels for highly efficient and reversible removal of heavy metal ions
    Juntao Liu, Xiao Ge, Xinxin Ye · 2016 · Journal of Materials Chemistry A
16. Autophagy in the CNS and Periphery Coordinate Lipophagy and Lipolysis in the Brown Adipose Tissue and Liver
    Nuria Martínez-López, Marina García Macia, Srabani Sahu, Diana Athonvarangkul, Emily J. Liebling, Paola Merlo, Francesco Cecconi, Gary J. Schwartz, Rajat Singh · 2015 · Cell Metabolism
17. <scp>AMPK</scp> activation protects cells from oxidative stress‐induced senescence via autophagic flux restoration and intracellular <scp>NAD</scp> ⁺ elevation
    Han, Xiaojuan, Tai, Haoran, Wang, Xiaobo, Wang, Zhe, Zhou, Jiao, Wei, Xiawei, Ding, Yi, Gong, Hui, Mo, Chunfen, Zhang, Jie et al. · 2016 · Aging Cell
18. BNIP3- and BNIP3L-Mediated Mitophagy Promotes the Generation of Natural Killer Cell Memory
    Timothy Edward O’Sullivan, Lexus R. Johnson, Helen H. Kang, Joseph Chai-Yuen Sun · 2015 · Immunity
19. A Combined Preclinical Therapy of Cannabinoids and Temozolomide against Glioma
    Sofía Torres, Mar Lorente, Fátima Rodríguez-Fornés, Sonia Hernández‐Tiedra, María Salazar‐Roa, Elena García-Taboada, Juan Antonio Barcia, Manuel Guzmán, Guillermo Velasco · 2011 · Molecular Cancer Therapeutics
20. Autophagy and mitophagy in the context of doxorubicin-induced cardiotoxicity
    Navid Koleini, Elissavet Kardami · 2017 · Oncotarget
21. The multiple roles of autophagy in cancer
    Mathias Tillmann Rosenfeldt, Kevin M. Ryan · 2011 · Carcinogenesis
22. Enhanced autophagy ameliorates cardiac proteinopathy
    Bhuiyan, Md. Shenuarin, Pattison, J. Scott, Osinska, Hanna, James, Jeanne, Gulick, James, McLendon, Patrick M., Hill, Joseph A., Sadoshima, Junichi, Robbins, Jeffrey · 2013 · Journal of Clinical Investigation
23. Endothelial cell and podocyte autophagy synergistically protect from diabetes-induced glomerulosclerosis
    Lenoir, Olivia, Jasiek, Magali, Hénique, Carole, Guyonnet, Léa, Hartleben, Björn, Bork, Tillmann, Chipont, Anna, Flosseau, Kathleen, Bensaada, Imane, Schmitt, Alain et al. · 2015 · Autophagy
24. A TRP Channel Senses Lysosome Neutralization by Pathogens to Trigger Their Expulsion
    Yuxuan Miao, Guojie Li, Xiaoli Zhang, Haoxing Xu, Soman N. Abraham · 2015 · Cell
25. Induction of autophagy supports the bioenergetic demands of quiescent muscle stem cell activation
    Tang, Ann H, Rando, Thomas A · 2014 · The EMBO Journal
26. Subversion of Cellular Autophagy Machinery by Hepatitis B Virus for Viral Envelopment
    Jianhua Li, Yinghui Liu, Zekun Wang, Kuancheng Liu, Yaohui Wang, Jiangxia Liu, Huanping Ding, Zhenghong Yuan · 2011 · Journal of Virology
27. Role of Autophagy in Cisplatin Resistance in Ovarian Cancer Cells
    Juan Wang, Gen Sheng Wu · 2014 · Journal of Biological Chemistry
28. Impaired Autophagy in the Lipid-Storage Disorder Niemann-Pick Type C1 Disease
    Sovan Sarkar, Bernadette Carroll, Yosef Buganim, Dorothea Maetzel, Alex H. M. Ng, John P. Cassady, Malkiel A. Cohen, Souvik Chakraborty, Haoyi Wang, Eric Spooner et al. · 2013 · Cell Reports
29. p38 MAPK inhibits autophagy and promotes microglial inflammatory responses by phosphorylating ULK1
    Yingli He, Hua She, Ting Zhang, Haidong Xu, Lihong Cheng, Manuel Yepes, Yingren Zhao, Zixu Mao · 2017 · The Journal of Cell Biology
30. Trehalose inhibits solute carrier 2A (SLC2A) proteins to induce autophagy and prevent hepatic steatosis
    DeBosch, Brian J., Heitmeier, Monique R., Mayer, Allyson L., Higgins, Cassandra B., Crowley, Jan R., Kraft, Thomas E., Chi, Maggie, Newberry, Elizabeth P., Chen, Zhouji, Finck, Brian N. et al. · 2016 · Science Signaling
31. Targeting the UPR transcription factor XBP1 protects against Huntington's disease through the regulation of FoxO1 and autophagy.
    René L. Vidal, Alicia Figueroa, F. Court, P. Thielen, C. Molina, Craig Wirth, Benjamín Caballero, R. Kiffin, J. Segura-Aguilar, A. Cuervo et al. · 2012 · Human Molecular Genetics
32. Neuronal stimulation induces autophagy in hippocampal neurons that is involved in AMPA receptor degradation after chemical long-term depression
    Shehata, Mohammad, Matsumura, Hiroyuki, Okubo-Suzuki, Reiko, Ohkawa, Noriaki, Inokuchi, Kaoru · 2012 · The Journal of Neuroscience
33. Recessive mutations in EPG5 cause Vici syndrome, a multisystem disorder with defective autophagy
    Thomas Cullup, Ay Lin Kho, Carlo Dionisi‐Vici, Birgit Brandmeier, Frances Smith, Zoë Urry, Michael A. Simpson, Shu Yau, Enrico Bertini, Verity M. McClelland et al. · 2012 · Nature Genetics
34. Parkin-mediated mitophagy in mutant hAPP neurons and Alzheimer's disease patient brains
    Ye, Xuan, Sun, Xiaqin, Starovoytov, Valentin, Cai, Qian · 2015 · Human Molecular Genetics
35. Leaky intestine and impaired microbiome in an amyotrophic lateral sclerosis mouse model
    Wu, Shaoping, Yi, Jianxun, Zhang, Yong-guo, Zhou, Jingsong, Sun, Jun · 2015 · Physiological Reports
36. Molecular Mechanisms of Autophagy in the Cardiovascular System
    Gatica, Damián, Chiong, Mario, Lavandero, Sergio, Klionsky, Daniel J. · 2015 · Circulation Research
37. Skeletal muscle action of estrogen receptor α is critical for the maintenance of mitochondrial function and metabolic homeostasis in females
    Ribas, Vicent, Drew, Brian G., Zhou, Zhenqi, Phun, Jennifer, Kalajian, Nareg Y., Soleymani, Teo, Daraei, Pedram, Widjaja, Kevin, Wanagat, Jonathan, de Aguiar Vallim, Thomas Q. et al. · 2016 · Science Translational Medicine
38. Autophagic Recycling Plays a Central Role in Maize Nitrogen Remobilization
    Li, Faqiang, Chung, Taijoon, Pennington, Janice G., Federico, Maria L., Kaeppler, Heidi F., Kaeppler, Shawn M., Otegui, Marisa S., Vierstra, Richard D. · 2015 · The Plant Cell
39. Autophagic and lysosomal defects in human tauopathies: analysis of post-mortem brain from patients with familial Alzheimer disease, corticobasal degeneration and progressive supranuclear palsy
    Piras, Antonio, Collin, Ludovic, Grüninger, Fiona, Graff, Caroline, Rönnbäck, Annica · 2016 · Acta Neuropathologica Communications
40. Autophagy: shaping the tumor microenvironment and therapeutic response
    Hannelore Maes, Noemí Rubio, Abhishek Dinkarnath Garg, Patrizia Agostinis · 2013 · Trends in Molecular Medicine
41. Mitochondria as a therapeutic target for ischemic stroke
    Zhi He, Niya Ning, Qiongxiu Zhou, Seyed Esmaeil Khoshnam, Maryam Farzaneh · 2019 · Free Radical Biology and Medicine
42. Macrophage autophagy protects against liver fibrosis in mice
    Lodder, Jasper, Denaës, Timothé, Chobert, Marie-Noële, Wan, JingHong, El-Benna, Jamel, Pawlotsky, Jean-Michel, Lotersztajn, Sophie, Teixeira-Clerc, Fatima · 2015 · Autophagy
43. Extracellular Vesicles Exploit Viral Entry Routes for Cargo Delivery
    Helena M. van Dongen, N. Masoumi, Kenneth Whitaker Witwer, Dirk Michiel Pegtel · 2016 · Microbiology and Molecular Biology Reviews
44. Internalized Tau Oligomers Cause Neurodegeneration by Inducing Accumulation of Pathogenic Tau in Human Neurons Derived from Induced Pluripotent Stem Cells
    Usenovic, Marija, Niroomand, Shahriar, Drolet, Robert E., Yao, Lihang, Gaspar, Renee C., Hatcher, Nathan G., Schachter, Joel, Renger, John J., Parmentier-Batteur, Sophie · 2015 · The Journal of Neuroscience
45. Placental Adaptations in Growth Restriction
    Song Zhang, Timothy R.H. Regnault, Paige Barker, Kimberley J. Botting, Isabella Caroline McMillen, Christine McMillan, Claire Trelford Roberts, Janna Leigh Morrison · 2015 · Nutrients
46. Therapeutic Targeting of Autophagy in Disease: Biology and Pharmacology
    Yan Cheng, Xingcong Ren, William N. Hait, Jinming Yang · 2013 · Pharmacological Reviews
47. The Atg8 family: multifunctional ubiquitin-like key regulators of autophagy
    Moran Rawet-Slobodkin, Zvulun Elazar · 2013 · Essays in Biochemistry
48. Breaking BAG: The Co-Chaperone BAG3 in Health and Disease
    Christian Behl · 2016 · Trends in Pharmacological Sciences
49. Compounds Triggering ER Stress Exert Anti-Melanoma Effects and Overcome BRAF Inhibitor Resistance
    Michaël Cerezo, Abdelali Lehraiki, Antoine Millet, Florian Rouaud, Magali Plaisant, Emilie Jaune, Thomas Botton, Cyril Ronco, Patricia Abbe, Hella Amdouni et al. · 2016 · Cancer Cell
50. A novel autophagy/mitophagy inhibitor liensinine sensitizes breast cancer cells to chemotherapy through DNM1L-mediated mitochondrial fission
    Jing Zhou, Guo-Bing Li, Yi Zheng, Han-Ming Shen, Xiao-ye Hu, Qian-liang Ming, Cheng Huang, Peng Li, N. Gao · 2015 · Autophagy
51. Cellular and metabolic functions for autophagy in cancer cells
    Candia M. Kenific, Jayanta Debnath · 2014 · Trends in Cell Biology
52. MTOR-independent, autophagic enhancer trehalose prolongs motor neuron survival and ameliorates the autophagic flux defect in a mouse model of amyotrophic lateral sclerosis
    Xiaojie Zhang, Sheng Chen, Lin Song, Yu Tang, Yufei Shen, Jia Xuan Li, Weidong Le · 2014 · Autophagy
53. Dynamic association of the ULK1 complex with omegasomes during autophagy induction
    Eleftherios Karanasios, Eloise Stapleton, Maria Manifava, Takeshi Kaizuka, Noboru Mizushima, Simon A. Walker, Nicholas T. Ktistakis · 2013 · Journal of Cell Science
54. A tuberous sclerosis complex signalling node at the peroxisome regulates mTORC1 and autophagy in response to ROS
    Zhang, Jiangwei, Kim, Jinhee, Alexander, Angela, Cai, Shengli, Tripathi, Durga Nand, Dere, Ruhee, Tee, Andrew R., Tait-Mulder, Jacqueline, Di Nardo, Alessia, Han, Juliette M. et al. · 2013 · Nature Cell Biology
55. Nerve Growth Factor and Pain Mechanisms
    Franziska Denk, David Bennett, Stephen Brendan McMahon · 2017 · Annual Review of Neuroscience
56. Ubiquitylation of Autophagy Receptor Optineurin by HACE1 Activates Selective Autophagy for Tumor Suppression
    Liu, Zhengzhao, Chen, Peng, Gao, Hong, Gu, Yu, Yang, Jiao, Peng, Hong, Xu, Xingxing, Wang, Haifeng, Yang, Meiqiang, Liu, Xiaoying et al. · 2014 · Cancer Cell
57. Inflammation-Induced Alteration of Astrocyte Mitochondrial Dynamics Requires Autophagy for Mitochondrial Network Maintenance
    Motori, Elisa, Puyal, Julien, Toni, Nicolas, Ghanem, Alexander, Angeloni, Cristina, Malaguti, Marco, Cantelli-Forti, Giorgio, Berninger, Benedikt, Conzelmann, Karl-Klaus, Götz, Magdalena et al. · 2013 · Cell Metabolism
58. Mitochondrial division ensures the survival of postmitotic neurons by suppressing oxidative damage
    Yusuke Kageyama, Zhongyan Zhang, Ricardo Horacio Roda, Masahiro Fukaya, Junko Wakabayashi, Nobunao Wakabayashi, Thomas W. Kensler, P. Hemachandra Reddy, Miho Iijima, Hiromi Sesaki · 2012 · The Journal of Cell Biology
59. Inhibition of autophagy with bafilomycin and chloroquine decreases mitochondrial quality and bioenergetic function in primary neurons
    Matthew Redmann, Gloria A. Benavides, Taylor F. Berryhill, Willayat Yousuf Wani, Xiaosen Ouyang, Michelle Smith Johnson, Saranya Ravi, Stephen Barnes, Victor M. Darley-Usmar, Jianhua Zhang · 2016 · Redox Biology
60. WIPI proteins: essential PtdIns3 P effectors at the nascent autophagosome
    Tassula Proikas‐Cezanne, Zsuzsanna Takács, Pierre Dönnes, Oliver Kohlbacher · 2015 · Journal of Cell Science
61. Emerging role of autophagy in kidney function, diseases and aging
    Tobias Bruno Huber, Charles L. Edelstein, Björn Hartleben, Ken Inoki, Man Jiang, Daisuke Koya, Shinji Kume, Wilfred Lieberthal, Nicolas Pallet, Alejandro Quiroga et al. · 2012 · Autophagy
62. NCOA4 deficiency impairs systemic iron homeostasis
    Bellelli, Roberto, Federico, Giorgia, Matte’, Alessandro, Colecchia, David, Iolascon, Achille, Chiariello, Mario, Santoro, Massimo, De Franceschi, Lucia, Carlomagno, Francesca · 2016 · Cell Reports
63. Mitochondrial dysfunction and mitophagy: the beginning and end to diabetic nephropathy?
    Gavin C. Higgins, Melinda T. Coughlan · 2013 · British Journal of Pharmacology
64. Axonal autophagosomes recruit dynein for retrograde transport through fusion with late endosomes
    Xiu‐Tang Cheng, Bing Zhou, Mei-Yao Lin, Qian Cai, Zu‐Hang Sheng · 2015 · The Journal of Cell Biology
65. NAD ⁺ repletion improves muscle function in muscular dystrophy and counters global PARylation
    Ryu, Dongryeol, Zhang, Hongbo, Ropelle, Eduardo R., Sorrentino, Vincenzo, Mázala, Davi A. G., Mouchiroud, Laurent, Marshall, Philip L., Campbell, Matthew D., Ali, Amir Safi, Knowels, Gary M. et al. · 2016 · Science Translational Medicine
66. Novel mechanisms for the antifibrotic action of nintedanib
    Rangarajan, Sunad, Kurundkar, Ashish, Kurundkar, Deepali, Bernard, Karen, Sanders, Yan Y., Ding, Qiang, Antony, Veena B., Zhang, Jianhua, Zmijewski, Jaroslaw, Thannickal, Victor J. · 2016 · American Journal of Respiratory Cell and Molecular Biology
67. Autophagy Inhibition Improves Chemosensitivity in BRAFV600E Brain Tumors
    Jean M. Mulcahy Levy, Joshua C. Thompson, Andrea M. Griesinger, Vladimir M. Amani, Andrew M. Donson, Diane K. Birks, Michael J. Morgan, David M. Mirsky, Michael H. Handler, Nicholas K. Foreman et al. · 2014 · Cancer Discovery
68. Autophagy protects auditory hair cells against neomycin-induced damage
    Zuhong He, Lingna Guo, Yilai Shu, Qiaojun Fang, Han Zhou, Yongze Liu, Dingding Liu, Ling Lü, Xiaoli Zhang, Xiaoqiong Ding et al. · 2017 · Autophagy
69. Autophagy in bone homeostasis and the onset of osteoporosis
    Yin, Xing, Zhou, Chenchen, Li, Jingtao, Liu, Renkai, Shi, Bing, Yuan, Quan, Zou, Shujuan · 2019 · Bone Research
70. Exploiting Intrinsic Nanoparticle Toxicity: The Pros and Cons of Nanoparticle-Induced Autophagy in Biomedical Research
    Karen Peynshaert, Bella B. Manshian, Freya Joris, Kevin Braeckmans, Stefaan C. De Smedt, Jo Demeester, Stefaan J. Soenen · 2014 · Chemical Reviews
71. Effect of resveratrol on mitochondrial function: Implications in parkin-associated familiar Parkinson's disease
    Anna Ferretta, Antonio Gaballo, Paola Tanzarella, Cláudia Piccoli, Nazzareno Capitanio, Beatrice Nico, Tiziana Annese, Marco Di Paola, Claudia Dell’Aquila, Michele De Mari et al. · 2014 · Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease
72. Improvement of drought tolerance by overexpressing MdATG18a is mediated by modified antioxidant system and activated autophagy in transgenic apple
    Xun Sun, Ping Wang, Xin Jia, Liuqing Huo, Runmin Che, Fengwang Ma · 2017 · Plant Biotechnology Journal
73. ROCK inhibition in models of neurodegeneration and its potential for clinical translation
    Koch, Jan Christoph, Tatenhorst, Lars, Roser, Anna-Elisa, Saal, Kim-Ann, Tönges, Lars, Lingor, Paul · 2018 · Pharmacology &amp; Therapeutics
74. The roles of apoptosis, autophagy and unfolded protein response in arbovirus, influenza virus, and HIV infections
    Parvaneh Mehrbod, Sudharsana Rao Ande, Javad Alizadeh, Shahrzad Rahimizadeh, Aryana Shariati, Hadis Malek, Mohammad Mostakhdem Hashemi, Kathleen K. M. Glover, Affan Ali Sher, Kevin M. Coombs et al. · 2019 · Virulence
75. Safety and biologic response of pre-operative autophagy inhibition in combination with gemcitabine in patients with pancreatic adenocarcinoma
    Boone, Brian A., Bahary, Nathan, Zureikat, Amer H, Moser, A. James, Normolle, Daniel P, Wu, Wen-Chi, Singhi, Aatur D., Bao, Phillip, Bartlett, David L, Liotta, Lance A et al. · 2015 · Annals of Surgical Oncology
76. A Cyanine Dye to Probe Mitophagy: Simultaneous Detection of Mitochondria and Autolysosomes in Live Cells
    Ying Liu, Jin Zhou, Linlin Wang, Xiaoxiao Hu, Xiangjun Liu, Meirong Liu, Zehui Charles Cao, Dihua Shangguan, Weihong Tan · 2016 · Journal of the American Chemical Society
77. Mutation in ATG5 reduces autophagy and leads to ataxia with developmental delay
    Kim, Myungjin, Sandford, Erin, Gatica, Damian, Qiu, Yu, Liu, Xu, Zheng, Yumei, Schulman, Brenda A, Xu, Jishu, Semple, Ian, Ro, Seung-Hyun et al. · 2016 · eLife
78. The role of NLRP3-CASP1 in inflammasome-mediated neuroinflammation and autophagy dysfunction in manganese-induced, hippocampal-dependent impairment of learning and memory ability
    Diya Wang, Jianbin Zhang, Wenkai Jiang, Zipeng Cao, Fang Zhao, Tongjian Cai, Michael Aschner, Wenjing Luo · 2017 · Autophagy
79. Temporal orchestration of circadian autophagy rhythm by C/EBPβ
    Ma, Di, Panda, Satchidananda, Lin, Jiandie D · 2011 · The EMBO Journal
80. Acetylation of Beclin 1 inhibits autophagosome maturation and promotes tumour growth
    Ting Sun, Xuan Li, Peng Zhang, Wen-Dan Chen, Hai‐Liang Zhang, Dandan Li, Rong Deng, Xiao-Jun Qian, Lin Jiao, Jiao Ji et al. · 2015 · Nature Communications
81. Updating the MISEV minimal requirements for extracellular vesicle studies: building bridges to reproducibility
    Kenneth Whitaker Witwer, Carolina Soekmadji, Andrew Francis Hill, Marca H. M. Wauben, Edit I. Buzás, Dolores Di Vizio, Juan Manuel Falcón‐Pérez, Chris Gardiner, Fred H. Hochberg, Igor V. Kurochkin et al. · 2017 · Journal of Extracellular Vesicles
82. Autophagy variation within a cell population determines cell fate through selective degradation of Fap-1
    Gump, Jacob M., Staskiewicz, Leah, Morgan, Michael J., Bamberg, Alison, Riches, David W. H., Thorburn, Andrew · 2014 · Nature Cell Biology
83. TMEM175 Is an Organelle K+ Channel Regulating Lysosomal Function
    Chunlei Cang, Kimberly Aranda, Young-jun Seo, Bruno Gasnier, Dejian Ren · 2015 · Cell
84. Autophagy signal transduction by ATG proteins: from hierarchies to networks
    Sebastian Wesselborg, Björn Stork · 2015 · Cellular and Molecular Life Sciences
85. S-Nitrosylation links obesity-associated inflammation to endoplasmic reticulum dysfunction
    Ling Yang, Ediz S. Calay, Jason Fan, Alessandro Arduini, Ryan C. Kunz, Steven P. Gygi, Abdullah Yalçın, Suneng Fu, Gökhan S. Hotamışlıgil · 2015 · Science
86. PDGF-mediated autophagy regulates vascular smooth muscle cell phenotype and resistance to oxidative stress
    Joshua Kuimeta Salabei, Timothy D. Cummins, Mahavir Singh, Steven Paul Jones, Aruni Bhatnagar, Bradford G. Hill · 2013 · Biochemical Journal
87. Long Noncoding RNA MALAT1 Promotes Aggressive Pancreatic Cancer Proliferation and Metastasis via the Stimulation of Autophagy
    Le Li, Hua Chen, Yue Gao, Yongwei Wang, Guangquan Zhang, Shangha Pan, Liang Ji, Rui Kong, Gang Wang, Yue-Hui Jia et al. · 2016 · Molecular Cancer Therapeutics
88. Membrane recruitment of endogenous LRRK2 precedes its potent regulation of autophagy
    Schapansky, J., Nardozzi, J. D., Felizia, F., LaVoie, M. J. · 2014 · Human Molecular Genetics
89. Acidic extracellular pH neutralizes the autophagy-inhibiting activity of chloroquine
    Paola Pellegrini, Angela Strambi, Zipoli Chiara, Maria Hägg-Olofsson, Maria Buoncervello, Stig Linder, Angelo De Milito · 2014 · Autophagy
90. Chemical modulation of chaperone-mediated autophagy by retinoic acid derivatives
    Jaime Anguiano, Thomas P. Garner, Murugesan Mahalingam, Bhaskar C. Das, Evripidis Gavathiotis, Ana María Cuervo · 2013 · Nature Chemical Biology
91. Chloroquine Inhibits Autophagy to Potentiate Antiestrogen Responsiveness in ER+ Breast Cancer
    Katherine Loree Cook, Anni M. Wärri, David R. Soto‐Pantoja, Pamela A.G. Clarke, Maria Idalia Cruz, Alan L. Zwart, Robert C. Clarke · 2014 · Clinical Cancer Research
92. Schwann cells use TAM receptor-mediated phagocytosis in addition to autophagy to clear myelin in a mouse model of nerve injury
    Brosius Lutz, Amanda, Chung, Won-Suk, Sloan, Steven A., Carson, Glenn A., Zhou, Lu, Lovelett, Emilie, Posada, Sean, Zuchero, J. Bradley, Barres, Ben A. · 2017 · Proceedings of the National Academy of Sciences
93. A Kinase-Independent Role for EGF Receptor in Autophagy Initiation
    Tan, Xiaojun, Thapa, Narendra, Sun, Yue, Anderson, Richard A. · 2015 · Cell
94. Bioenergetics of neurons inhibit the translocation response of Parkin following rapid mitochondrial depolarization
    Victor S. Van Laar, Beth A. Arnold, Steven J. Cassady, Charleen T. Chu, Edward A. Burton, Sarah B. Berman · 2010 · Human Molecular Genetics
95. Metabolic Dependencies in RAS -Driven Cancers
    Alec C. Kimmelman · 2015 · Clinical Cancer Research
96. Adiponectin Stimulates Autophagy and Reduces Oxidative Stress to Enhance Insulin Sensitivity During High-Fat Diet Feeding in Mice
    Ying Liu, Rengasamy Palanivel, Esther Rai, Min S. Park, Timothy V. Gabor, Michael P. Scheid, Aimin Xu, Gary Sweeney · 2014 · Diabetes
97. A novel curcumin analog binds to and activates TFEB in vitro and in vivo independent of MTOR inhibition
    Ju‐Xian Song, Yueru Sun, Ivana Peluso, Yu Xiao Zeng, Xing Yu, Jiahong Lu, Zheng Xu, Mingzhong Wang, Liangfeng Liu, Yingyu Huang et al. · 2016 · Autophagy
98. Function and Mechanisms of Autophagy in Brain and Spinal Cord Trauma
    Marta M. Lipinski, Junfang Wu, Alan I. Faden, Chinmoy Sarkar · 2015 · Antioxidants and Redox Signaling
99. Celastrol mediates autophagy and apoptosis via the ROS/JNK and Akt/mTOR signaling pathways in glioma cells
    Xihong Liu, Peiyuan Zhao, Xiujuan Wang, Lei Wang, Yingjun Zhu, Yadi Song, Wei Gao · 2019 · Journal of Experimental & Clinical Cancer Research
100. Vaccine Activation of the Nutrient Sensor GCN2 in Dendritic Cells Enhances Antigen Presentation
     Rajesh Ravindran, Nooruddin Khan, Helder Imoto Nakaya, Shuzhao Li, Jens Loebbermann, Mohan S. Maddur, Youngja H. Park, Dean P. Jones, Pascal Chappert, Jean M. Davoust et al. · 2013 · Science