The DOI matches its Crossref record; 38 of the 38 references it cites were found in a registry or an index.
VCP/p97 is essential for maturation of ubiquitin-containing autophagosomes and this function is impaired by mutations that cause IBMPFD
Open accessAbstract
VCP (VCP/p97) is a ubiquitously expressed member of the AAA(+)-ATPase family of chaperone-like proteins that regulates numerous cellular processes including chromatin decondensation, homotypic membrane fusion and ubiquitin-dependent protein degradation by the proteasome. Mutations in VCP cause a multisystem degenerative disease consisting of inclusion body myopathy, Paget disease of bone, and frontotemporal dementia (IBMPFD). Here we show that VCP is essential for autophagosome maturation. We generated cells stably expressing dual-tagged LC3 (mCherry-EGFP-LC3) which permit monitoring of autophagosome maturation. We determined that VCP deficiency by RNAi-mediated knockdown or overexpression of dominant-negative VCP results in significant accumulation of immature autophagic vesicles, some of which are abnormally large, acidified and exhibit cathepsin B activity. Furthermore, expression of disease-associated VCP mutants (R155H and A232E) also causes this autophagy defect. VCP was found to be essential to autophagosome maturation under basal conditions and in cells challenged by proteasome inhibition, but not in cells challenged by starvation, suggesting that VCP might be selectively required for autophagic degradation of ubiquitinated substrates. Indeed, a high percentage of the accumulated autophagic vesicles contain ubiquitin-positive contents, a feature that is not observed in autophagic vesicles that accumulate following starvation or treatment with Bafilomycin A. Finally, we show accumulation of numerous, large LAMP-1 and LAMP-2-positive vacuoles and accumulation of LC3-II in myoblasts derived from patients with IBMPFD. We conclude that VCP is essential for maturation of ubiquitin-containing autophagosomes and that defect in this function may contribute to IBMPFD pathogenesis.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“suggesting a late-stage block in the fusion of lysosomes with autophagosomes [249].”
From Autophagy and ALS: mechanistic insights and therapeutic implications (2022) · cites this paper as [249]
In the citing paper
“muscle from IBMPFD patients carrying VCP mutations [246] and transgenic mice expressing VCP mutants [244,248,249] display accumulations of SQSTM1- and LC3-positive autophagosomes and abnormal mitochondria [250,251].”
From Autophagy and ALS: mechanistic insights and therapeutic implications (2022) · cites this paper as [249]
In the citing paper
“enlarged and acidified autophagic vacuoles accumulate in cells expressing disease-associated VCP mutants, suggesting a late-stage block in the fusion of lysosomes with autophagosomes [249].”
From Autophagy and ALS: mechanistic insights and therapeutic implications (2022) · cites this paper as [249]
In the citing paper
“In IBMPFD murine muscle lysates, VCP mutations disrupt autophagosome maturation and fusion with lysosomes, but not the formation of early autophagosome precursors [246,249].”
From Autophagy and ALS: mechanistic insights and therapeutic implications (2022) · cites this paper as [249]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Pankiv, S., Clausen, T. H., Lamark, T., Brech, A., Bruun, J.-A., Outzen, H., Øvervatn, A., Bjørkøy, G., & Johansen, T. (2007) · Journal of Biological Chemistry · doi:10.1074/jbc.m702824200 · Cited by 4,578
de Duve, C., & Wattiaux, R. (1966) · Annual Review of Physiology · doi:10.1146/annurev.ph.28.030166.002251 · Cited by 3,033 · cited 1×
“Early studies appreciated that delivery of lysosomal hydrolases occurs via fusion with lysosomes.(1) As this process has been elucidated, it has become apparent that autophagosome maturation is a complex sequential, step-wise process that involves fusion with multiple components of the endolysosomal system to produce…”
BackgroundThe ESCRT machinery in endosomal sorting of ubiquitylated membrane proteins
Raiborg, C., & Stenmark, H. (2009) · Nature · doi:10.1038/nature07961 · Cited by 1,359
HDAC6 rescues neurodegeneration and provides an essential link between autophagy and the UPS.
Pandey, U. B., Nie, Z., Batlevi, Y., McCray, B. A., Ritson, G. P., Nedelsky, N. B., Schwartz, S. L., DiProspero, N. A., Knight, M. A., Schuldiner, O., et al. (2007) · Nature · doi:10.1038/nature05853 · Cited by 1,234
Self-citationBoland, B., Kumar, A., Lee, S., Platt, F. M., Wegiel, J., Yu, W. H., & Nixon, R. A. (2008) · Journal of Neuroscience · doi:10.1523/jneurosci.0800-08.2008 · Cited by 1,119
p62 at the crossroads of autophagy, apoptosis, and cancer
Moscat, J., & Diaz-Meco, M. T. (2009) · Cell · doi:10.1016/j.cell.2009.05.023 · Cited by 1,073
Role for Rab7 in maturation of late autophagic vacuoles
Jäger, S., Bucci, C., Tanida, I., Ueno, T., Kominami, E., Säftig, P., & Eskelinen, E. (2004) · Journal of Cell Science · doi:10.1242/jcs.01370 · Cited by 970
Mutations in the endosomal ESCRTIII-complex subunit CHMP2B in frontotemporal dementia
Skibinski, G., Parkinson, N. J., Brown, J. M., Chakrabarti, L., Lloyd, S. L., Hummerich, H., Nielsen, J. E., Hodges, J. R., Spillantini, M. G., Thusgaard, T., et al. (2005) · Nature Genetics · doi:10.1038/ng1609 · Cited by 822
HDAC6 and microtubules are required for autophagic degradation of aggregated huntingtin.
Iwata, A., Riley, B. E., Johnston, J. A., & Kopito, R. R. (2005) · Journal of Biological Chemistry · doi:10.1074/jbc.m508786200 · Cited by 719
Rab7 is required for the normal progression of the autophagic pathway in mammalian cells
Gutierrez, M. G., Munafó, D. B., Berón, W., & Colombo, M. I. (2004) · Journal of Cell Science · doi:10.1242/jcs.01114 · Cited by 680
Flagged first, then by citations
Cited by
Sorted by citations
Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition).
Klionsky, D. J., Abdelmohsen, K., Abe, A., Abedin, M. J., Abeliovich, H., Acevedo Arozena, A., Adachi, H., Adams, C. M., Adams, P. D., Adeli, K., et al. (2016) · Autophagy · doi:10.1080/15548627.2015.1100356 · Cited by 5,894
Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition) 1
Klionsky, D. J., Abdel-Aziz, A. K., Abdelfatah, S., Abdellatif, M., Abdoli, A., Abel, S., Abeliovich, H., Abildgaard, M. H., Abudu, Y. P., Acevedo-Arozena, A., et al. (2021) · Autophagy · doi:10.1080/15548627.2020.1797280 · Cited by 2,897
Self-citationThe role of autophagy in neurodegenerative disease
Nixon, R. A. (2013) · Nature Medicine · doi:10.1038/nm.3232 · Cited by 2,059
Converging Mechanisms in ALS and FTD: Disrupted RNA and Protein Homeostasis
Ling, S.-C., Polymenidou, M., & Cleveland, D. W. (2013) · Neuron · doi:10.1016/j.neuron.2013.07.033 · Cited by 1,811
Selective autophagy mediated by autophagic adapter proteins
Johansen, T., & Lamark, T. (2011) · Autophagy · doi:10.4161/auto.7.3.14487 · Cited by 1,788
Proteasome and p97 mediate mitophagy and degradation of mitofusins induced by Parkin
Tanaka, A., Cleland, M. M., Xu, S., Narendra, D. P., Suen, D.-F., Karbowski, M., & Youle, R. J. (2010) · Journal of Cell Biology · doi:10.1083/jcb.201007013 · Cited by 1,369
Exome Sequencing Reveals VCP Mutations as a Cause of Familial ALS
Johnson, J. O., Mandrioli, J., Benatar, M., Abramzon, Y., Van Deerlin, V. M., Trojanowski, J. Q., Gibbs, J. R., Brunetti, M., Gronka, S., Wuu, J., et al. (2010) · Neuron · doi:10.1016/j.neuron.2010.11.036 · Cited by 1,235
Self-citationTDP-43 and FUS/TLS: emerging roles in RNA processing and neurodegeneration
Lagier-Tourenne, C., Polymenidou, M., & Cleveland, D. W. (2010) · Human Molecular Genetics · doi:10.1093/hmg/ddq137 · Cited by 1,021
Emerging functions of the VCP/p97 AAA-ATPase in the ubiquitin system
Meyer, H. H., Bug, M., & Bremer, S. (2012) · Nature Cell Biology · doi:10.1038/ncb2407 · Cited by 832
Eukaryotic Stress Granules Are Cleared by Autophagy and Cdc48/VCP Function
Buchan, J. R., Kolaitis, R.-M., Taylor, J. P., & Parker, R. (2013) · Cell · doi:10.1016/j.cell.2013.05.037 · Cited by 737
Self-citationAzithromycin: Mechanisms of action and their relevance for clinical applications
Parnham, M. J., Haber, V. E., Giamarellos‐Bourboulis, E. J., Perletti, G., Verleden, G. M., & Vos, R. (2014) · Pharmacology & Therapeutics · doi:10.1016/j.pharmthera.2014.03.003 · Cited by 684
Machinery, regulation and pathophysiological implications of autophagosome maturation
Zhao, Y. G., Codogno, P., & Zhang, H. (2021) · Nature Reviews Molecular Cell Biology · doi:10.1038/s41580-021-00392-4 · Cited by 582
Ubiquitin: Same Molecule, Different Degradation Pathways
Clague, M. J., & Urbé, S. (2010) · Cell · doi:10.1016/j.cell.2010.11.012 · Cited by 535
Pharmacological targeting of endoplasmic reticulum stress in disease
Marciniak, S. J., Chambers, J. E., & Ron, D. (2021) · Nature Reviews Drug Discovery · doi:10.1038/s41573-021-00320-3 · Cited by 548
Aggrephagy: Selective Disposal of Protein Aggregates by Macroautophagy
Lamark, T., & Johansen, T. (2012) · International Journal of Cell Biology · doi:10.1155/2012/736905 · Cited by 514
The different autophagy degradation pathways and neurodegeneration
Fleming, A., Bourdenx, M., Fujimaki, M., Karabiyik, C., Krause, G. J., Lopez, A., Martín‐Segura, A., Puri, C., Scrivo, A., Skidmore, J., et al. (2022) · Neuron · doi:10.1016/j.neuron.2022.01.017 · Cited by 500
The VCP/p97 system at a glance: connecting cellular function to disease pathogenesis
Meyer, H. H., & Weihl, C. C. (2014) · Journal of Cell Science · doi:10.1242/jcs.093831 · Cited by 442
Crosstalk Between Mammalian Autophagy and the Ubiquitin-Proteasome System
Kocatürk, N. M., & Gözüaçık, D. (2018) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2018.00128 · Cited by 442
Guerriero, C. J., & Brodsky, J. L. (2012) · Physiological Reviews · doi:10.1152/physrev.00027.2011 · Cited by 429
VCP/p97-Mediated Unfolding as a Principle in Protein Homeostasis and Signaling
van den Boom, J., & Meyer, H. H. (2017) · Molecular Cell · doi:10.1016/j.molcel.2017.10.028 · Cited by 415
Tasaki, T., Sriram, S. M., Park, K. S., & Kwon, Y. T. (2012) · Annual Review of Biochemistry · doi:10.1146/annurev-biochem-051710-093308 · Cited by 395
Covalent and allosteric inhibitors of the ATPase VCP/p97 induce cancer cell death
Magnaghi, P., D’Alessio, R., Valsasina, B., Avanzi, N. R., Rizzi, S., Asa, D., Gasparri, F., Cozzi, L., Cucchi, U., Orrenius, C., et al. (2013) · Nature Chemical Biology · doi:10.1038/nchembio.1313 · Cited by 381
Mycobacterium tuberculosis induces the miR-33 locus to reprogram autophagy and host lipid metabolism
Ouimet, M. I., Köster, S., Sakowski, E. T., Ramkhelawon, B., Solingen, C. V., Oldebeken, S. R., Karunakaran, D., Portal‐Celhay, C., Sheedy, F. J., Ray, T. D., et al. (2016) · Nature Immunology · doi:10.1038/ni.3434 · Cited by 365
TDP-43 Proteinopathy and ALS: Insights into Disease Mechanisms and Therapeutic Targets
Scotter, E. L., Chen, H.-J., & Shaw, C. E. (2015) · Neurotherapeutics · doi:10.1007/s13311-015-0338-x · Cited by 382
VCP/p97 cooperates with YOD1, UBXD1 and PLAA to drive clearance of ruptured lysosomes by autophagy
Papadopoulos, C., Kirchner, P., Bug, M., Grum, D., Koerver, L., Schulze, N., Pöhler, R., Dressler, A., Fengler, S., Arhzaouy, K., et al. (2016) · The EMBO Journal · doi:10.15252/embj.201695148 · Cited by 353
Proteotoxic crisis, the ubiquitin-proteasome system, and cancer therapy
Deshaies, R. J. (2014) · BMC Biology · doi:10.1186/s12915-014-0094-0 · Cited by 341
Dantuma, N. P., & Bott, L. C. (2014) · Frontiers in Molecular Neuroscience · doi:10.3389/fnmol.2014.00070 · Cited by 354
Self-citationUbiquitination of G3BP1 mediates stress granule disassembly in a context-specific manner
Gwon, Y., Maxwell, B. A., Kolaitis, R., Zhang, P., Kim, H. J., & Taylor, J. P. (2021) · Science · doi:10.1126/science.abf6548 · Cited by 341
Self-citationChou, T., Brown, S. J., Minond, D., Nordin, B. E., Li, K., Jones, A. C., Chase, P. S., Porubsky, P. R., Stoltz, B. M., Schoenen, F. J., et al. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1015312108 · Cited by 333
O-GlcNAc-modification of SNAP-29 regulates autophagosome maturation
Guo, B., Liang, Q., Li, L., Hu, Z., Wu, F., Zhang, P., Ma, Y., Zhao, B., Kovács, A. L., Zhang, Z., et al. (2014) · Nature Cell Biology · doi:10.1038/ncb3066 · Cited by 295
A comprehensive glossary of autophagy-related molecules and processes (2ndedition)
Klionsky, D. J., Baehrecke, E. H., Brumell, J. H., Chu, C. T., Codogno, P., Cuervo, A. M., Debnath, J., Deretic, V. P., Elazar, Z., Eskelinen, E., et al. (2011) · Autophagy · doi:10.4161/auto.7.11.17661 · Cited by 298
Deficiency of ATP13A2 Leads to Lysosomal Dysfunction, α-Synuclein Accumulation, and Neurotoxicity
Usenovic, M., Tresse, E., Mazzulli, J. R., Taylor, J. P., & Krainc, D. (2012) · Journal of Neuroscience · doi:10.1523/jneurosci.5575-11.2012 · Cited by 303
Self-citationThe AAA-ATPase VCP/p97 promotes 53BP1 recruitment by removing L3MBTL1 from DNA double-strand breaks
Ács, K., Luijsterburg, M. S., Ackermann, L., Salomons, F. A., Hoppe, T., & Dantuma, N. P. (2011) · Nature Structural & Molecular Biology · doi:10.1038/nsmb.2188 · Cited by 296
Self-citationTDP-43 Mediates Degeneration in a Novel Drosophila Model of Disease Caused by Mutations in VCP/p97
Ritson, G. P., Custer, S. K., Freibaum, B. D., Guinto, J. B., Geffel, D., Moore, J., Tang, W., Winton, M. J., Neumann, M., Trojanowski, J. Q., et al. (2010) · Journal of Neuroscience · doi:10.1523/jneurosci.5894-09.2010 · Cited by 268
Self-citationZhou, C., Zhong, W., Zhou, J., Sheng, F., Fang, Z., Wei, Y., Chen, Y., Deng, X., Xia, B., & Lin, J. (2012) · Autophagy · doi:10.4161/auto.20284 · Cited by 253
Molecules and their functions in autophagy
Pyo, J.-O., Nah, J., & Jung, Y. (2012) · Experimental & Molecular Medicine · doi:10.3858/emm.2012.44.2.029 · Cited by 262
Autophagy, aging, and age-related neurodegeneration
Palmer, J. E., Wilson, N., Son, S. M., Obrocki, P., Wróbel, L., Rob, M., Takla, M., Korolchuk, V. I., & Rubinsztein, D. C. (2024) · Neuron · doi:10.1016/j.neuron.2024.09.015 · Cited by 277
Kim, N. C., Tresse, E., Kolaitis, R., Molliex, A., Thomas, R. E., Alami, N. H., Wang, B., Joshi, A., Smith, R. B., Ritson, G. P., et al. (2013) · Neuron · doi:10.1016/j.neuron.2013.02.029 · Cited by 248
Self-citationHsp90-Cdc37 Chaperone Complex Regulates Ulk1- and Atg13-Mediated Mitophagy
Joo, J. H., Dorsey, F. C., Joshi, A., Hennessy-Walters, K. M., Rose, K. L., McCastlain, K., Zhang, J., Iyengar, R., Jung, C. H., Suen, D.-F., et al. (2011) · Molecular Cell · doi:10.1016/j.molcel.2011.06.018 · Cited by 232
Cdc48/p97 promotes degradation of aberrant nascent polypeptides bound to the ribosome
Verma, R., Oania, R. S., Kolawa, N. J., & Deshaies, R. J. (2013) · eLife · doi:10.7554/elife.00308 · Cited by 253
Pharmacologic agents targeting autophagy
Vakifahmetoglu-Norberg, H., Xia, H., & Yuan, J. (2015) · Journal of Clinical Investigation · doi:10.1172/jci73937 · Cited by 247
Root, J. T., Merino, P., Nuckols, A., Johnson, M. A., & Kukar, T. L. (2021) · Neurobiology of Disease · doi:10.1016/j.nbd.2021.105360 · Cited by 243
Ritz, D., Vuk, M., Kirchner, P., Bug, M., Schütz, S., Hayer, A., Bremer, S., Lusk, C., Baloh, R. H., Lee, H., et al. (2011) · Nature Cell Biology · doi:10.1038/ncb2301 · Cited by 224
Cdc48: a power machine in protein degradation
Stolz, A., Hilt, W., Buchberger, A., & Wolf, D. H. (2011) · Trends in Biochemical Sciences · doi:10.1016/j.tibs.2011.06.001 · Cited by 235
Gao, F., Almeida, S., & Lopez‐Gonzalez, R. (2017) · The EMBO Journal · doi:10.15252/embj.201797568 · Cited by 227
Custer, S. K., Neumann, M., Lu, H., Wright, A. C., & Taylor, J. P. (2010) · Human Molecular Genetics · doi:10.1093/hmg/ddq050 · Cited by 204
Self-citationAutophagy and ALS: mechanistic insights and therapeutic implications
Chua, J. P., De Calbiac, H., Kabashi, E., & Barmada, S. J. (2022) · Autophagy · doi:10.1080/15548627.2021.1926656 · Cited by 189
Götzl, J. K., Mori, K., Daμμe, M., Fellerer, K., Tahirović, S., Kleinberger, G., Janssens, J., van der Zee, J., Lang, C. M., Kremmer, E., et al. (2014) · Acta Neuropathologica · doi:10.1007/s00401-014-1262-6 · Cited by 196
The ubiquitin-proteasome system and autophagy: Coordinated and independent activities
Cohen‐Kaplan, V., Livneh, I., Avni, N., Cohen-Rosenzweig, C., & Ciechanover, A. J. (2016) · The International Journal of Biochemistry & Cell Biology · doi:10.1016/j.biocel.2016.07.019 · Cited by 205
Recent advances in p97/VCP/Cdc48 cellular functions
Yamanaka, K., Sasagawa, Y., & Ogura, T. (2011) · Biochimica et Biophysica Acta (BBA) - Molecular Cell Research · doi:10.1016/j.bbamcr.2011.07.001 · Cited by 196
The Ubiquitin-Proteasome System and the Autophagic-Lysosomal System in Alzheimer Disease
Ihara, Y., Morishima-Kawashima, M., & Nixon, R. (2012) · Cold Spring Harbor Perspectives in Medicine · doi:10.1101/cshperspect.a006361 · Cited by 190
Kaminskyy, V. O., & Zhivotovsky, B. (2011) · Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics · doi:10.1016/j.bbapap.2011.05.013 · Cited by 193
Autophagy and Neuronal Cell Death in Neurological DisordersPreprint
Nixon, R. A., & Yang, D.-S. (2012) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a008839 · Cited by 183
ULK1 and ULK2 Regulate Stress Granule Disassembly Through Phosphorylation and Activation of VCP/p97
Wang, B., Maxwell, B. A., Joo, J. H., Gwon, Y., Messing, J., Mishra, A., Shaw, T. I., Ward, A. L., Quan, H., Sakurada, S. M., et al. (2019) · Molecular Cell · doi:10.1016/j.molcel.2019.03.027 · Cited by 185
Self-citationBlythe, E. E., Olson, K. C., Chau, V., & Deshaies, R. J. (2017) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1706205114 · Cited by 178
Boning up on autophagy: The role of autophagy in skeletal biology
Shapiro, I. M., Layfield, R., Lotz, M., Settembre, C., & Whitehouse, C. (2014) · Autophagy · doi:10.4161/auto.26679 · Cited by 175
Ding, B., Zhang, G., Yang, X., Zhang, S., Chen, L., Yan, Q., Xu, M., Banerjee, A. K., & Chen, M. (2014) · Cell Host & Microbe · doi:10.1016/j.chom.2014.04.004 · Cited by 181
Turakhiya, A., MEYER, S. R., Marincola, G., Böhm, S., Vanselow, J. T., Schlösser, A., Hofmann, K., & Buchberger, A. (2018) · Molecular Cell · doi:10.1016/j.molcel.2018.04.021 · Cited by 173
Pathogenesis of Paget Disease of Bone
Ralston, S. H., & Layfield, R. (2012) · Calcified Tissue International · doi:10.1007/s00223-012-9599-0 · Cited by 170
The Ubiquitin-Proteasome System in Neurodegeneration
McKinnon, C., & Tabrizi, S. J. (2014) · Antioxidants and Redox Signaling · doi:10.1089/ars.2013.5802 · Cited by 175
The elimination of accumulated and aggregated proteins: A role for aggrephagy in neurodegeneration
Yamamoto, A., & Simonsen, A. (2010) · Neurobiology of Disease · doi:10.1016/j.nbd.2010.08.015 · Cited by 155
SQSTM1 mutations – Bridging Paget disease of bone and ALS/FTLD
Rea, S. L., Majcher, V., Searle, M. S., & Layfield, R. (2014) · Experimental Cell Research · doi:10.1016/j.yexcr.2014.01.020 · Cited by 152
Connections between SNAREs and autophagy
Moreau, K., Renna, M., & Rubinsztein, D. C. (2013) · Trends in Biochemical Sciences · doi:10.1016/j.tibs.2012.11.004 · Cited by 160
Atrogin-1 deficiency promotes cardiomyopathy and premature death via impaired autophagy
Zaglia, T., Milan, G., Ruhs, A., Franzoso, M., Bertaggia, E., Pianca, N., Carpi, A., Carullo, P., Pesce, P., Sacerdoti, D., et al. (2014) · Journal of Clinical Investigation · doi:10.1172/jci66339 · Cited by 147
Autophagy: A new player in skeletal maintenance?
Hocking, L. J., Whitehouse, C., & Helfrich, M. (2012) · Journal of Bone and Mineral Research · doi:10.1002/jbmr.1668 · Cited by 152
Wallings, R. L., Humble, S. W., Ward, M. E., & Wade-Martins, R. (2019) · Trends in Neurosciences · doi:10.1016/j.tins.2019.10.002 · Cited by 153
VCP/p97 regulates Beclin-1-dependent autophagy initiation
Hill, S. M., Wróbel, L., Ashkenazi, A., Fernandez-Estévez, M., Tan, K., Bürli, R. W., & Rubinsztein, D. C. (2021) · Nature Chemical Biology · doi:10.1038/s41589-020-00726-x · Cited by 148
Ju, J.-S., & Weihl, C. C. (2010) · Human Molecular Genetics · doi:10.1093/hmg/ddq157 · Cited by 143
Chou, T., Li, K., Frankowski, K. J., Schoenen, F. J., & Deshaies, R. J. (2013) · ChemMedChem · doi:10.1002/cmdc.201200520 · Cited by 147
Cdc48/p97 and Shp1/p47 regulate autophagosome biogenesis in concert with ubiquitin-like Atg8
Krick, R., Bremer, S., Welter, E., Schlotterhose, P., Mühe, Y., Eskelinen, E., & Thumm, M. (2010) · The Journal of Cell Biology · doi:10.1083/jcb.201002075 · Cited by 142
Proteomic profiling of VCP substrates links VCP to K6‐linked ubiquitylation and c‐Myc function
Heidelberger, J. B., Voigt, A., Borisova, M. E., Petrosino, G., Ruf, S., Wagner, S., & Beli, P. (2018) · EMBO Reports · doi:10.15252/embr.201744754 · Cited by 142
Emerging connections between RNA and autophagy
Frankel, L. B., Lubas, M., & Lund, A. H. (2016) · Autophagy · doi:10.1080/15548627.2016.1222992 · Cited by 140
Mice deficient in Epg5 exhibit selective neuronal vulnerability to degeneration
Zhao, H., Zhao, Y. G., Wang, X., Xu, L., Miao, L., Feng, D., Chen, Q., Kovács, A. L., Fan, D., & Zhang, H. (2013) · The Journal of Cell Biology · doi:10.1083/jcb.201211014 · Cited by 132
The ubiquitin proteasome system in neurodegenerative diseases: Culprit, accomplice or victim?
Dennissen, F. J. A., Kholod, N., & van Leeuwen, F. W. (2012) · Progress in Neurobiology · doi:10.1016/j.pneurobio.2012.01.003 · Cited by 128
Mechanisms of neuronal homeostasis: Autophagy in the axon
Maday, S. (2016) · Brain Research · doi:10.1016/j.brainres.2016.03.047 · Cited by 130
Rea, S. L., Walsh, J. P., Layfield, R., Ratajczak, T., & Xu, J. (2013) · Endocrine Reviews · doi:10.1210/er.2012-1034 · Cited by 123
Autophagy in Age-Associated Neurodegeneration
Metaxakis, A., Ploumi, C., & Tavernarakis, N. (2018) · Cells · doi:10.3390/cells7050037 · Cited by 127
The Role of Ubiquitin in Autophagy-Dependent Protein Aggregate Processing
Yao, T. (2010) · Genes & Cancer · doi:10.1177/1947601910383277 · Cited by 122
Self-citationBadadani, M., Nalbandian, A., Watts, G. D. J., Vesa, J., Kitazawa, M., Su, H., Tanaja, J., Dec, E., Wallace, D. C., Mukherjee, J., et al. (2010) · PLoS ONE · doi:10.1371/journal.pone.0013183 · Cited by 127
Self-citationAutophagosome dynamics in neurodegeneration at a glance
Wong, Y. C., & Holzbaur, E. L. F. (2015) · Journal of Cell Science · doi:10.1242/jcs.161216 · Cited by 117
Coordinate regulation of mutant NPC1 degradation by selective ER autophagy and MARCH6-dependent ERAD
Schultz, M. L., Krus, K. L., Kaushik, S., Dang, D., Chopra, R., Qi, L., Shakkottai, V. G., Cuervo, A. M., & Lieberman, A. P. (2018) · Nature Communications · doi:10.1038/s41467-018-06115-2 · Cited by 118
Taylor, J. P. (2015) · Neurology · doi:10.1212/wnl.0000000000001862 · Cited by 112
Self-citationp97 Negatively Regulates NRF2 by Extracting Ubiquitylated NRF2 from the KEAP1-CUL3 E3 Complex
Tao, S., Liu, P., Luo, G., de la Vega, M. R., Chen, R., Wu, T., Tillotson, J., Chapman, E., & Zhang, D. D. (2017) · Molecular and Cellular Biology · doi:10.1128/mcb.00660-16 · Cited by 116
Autophagy as a common pathway in amyotrophic lateral sclerosis
Nguyen, D. K. H., Thombre, R., & Wang, J. (2018) · Neuroscience Letters · doi:10.1016/j.neulet.2018.04.006 · Cited by 118
Proteasomes and Several Aspects of Their Heterogeneity Relevant to Cancer
Morozov, A. V., & Карпов, В. Л. (2019) · Frontiers in Oncology · doi:10.3389/fonc.2019.00761 · Cited by 118
Imbalances in p97 co‐factor interactions in human proteinopathy
Fernández‐Sáiz, V., & Buchberger, A. (2010) · EMBO Reports · doi:10.1038/embor.2010.49 · Cited by 110
Autophagy: Supporting cellular and organismal homeostasis by self-eating
Eskelinen, E. (2019) · The International Journal of Biochemistry & Cell Biology · doi:10.1016/j.biocel.2019.03.010 · Cited by 110
Radford, R. A. W., Morsch, M., Rayner, S. L., Cole, N. J., Pountney, D. L., & Chung, R. S. (2015) · Frontiers in Cellular Neuroscience · doi:10.3389/fncel.2015.00414 · Cited by 105
AAA ATPase p97/VCP is essential for TRIM21-mediated virus neutralization
Hauler, F., Mallery, D. L., McEwan, W. A., Bidgood, S. R., & James, L. C. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1210659109 · Cited by 104
Ageing as a risk factor for ALS/FTD
Niccoli, T., Partridge, L., & Isaacs, A. M. (2017) · Human Molecular Genetics · doi:10.1093/hmg/ddx247 · Cited by 106
Altered cofactor regulation with disease-associated p97/VCP mutations
Zhang, X., Gui, L., Zhang, X., Bulfer, S. L., Sanghez, V., Wong, D., Lee, Y., Lehmann, L. W., Lee, J. S., Shih, P.-Y., et al. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1418820112 · Cited by 105
Autophagy in neuronal cells: general principles and physiological and pathological functions
Daμμe, M., Suntio, T., Säftig, P., & Eskelinen, E. (2014) · Acta Neuropathologica · doi:10.1007/s00401-014-1361-4 · Cited by 109
Ghosal, G., Leung, J. W. C., Nair, B. C., Fong, K.-W., & Chen, J. (2012) · Journal of Biological Chemistry · doi:10.1074/jbc.m112.400135 · Cited by 100
Protein Homeostasis in Amyotrophic Lateral Sclerosis: Therapeutic Opportunities?
Webster, C. P., Smith, E. F., Shaw, P. J., & Vos, K. J. D. (2017) · Frontiers in Molecular Neuroscience · doi:10.3389/fnmol.2017.00123 · Cited by 109
Cdc48: A Swiss Army Knife of Cell Biology
Baek, G. H., Cheng, H., Choe, V., Bao, X. R., Shao, J., Luo, S., & Rao, H. (2013) · Journal of Amino Acids · doi:10.1155/2013/183421 · Cited by 105
Mutations in the Human AAA+ Chaperone p97 and Related Diseases
Tang, W. K., & Xia, D. (2016) · Frontiers in Molecular Biosciences · doi:10.3389/fmolb.2016.00079 · Cited by 99
Role of p97/VCP (Cdc48) in genome stability
Vaz, B., Halder, S., & Ramadan, K. (2013) · Frontiers in Genetics · doi:10.3389/fgene.2013.00060 · Cited by 95
Autophagy receptor defects and ALS-FTLD
Majcher, V., Goode, A., James, V. H., & Layfield, R. (2015) · Molecular and Cellular Neuroscience · doi:10.1016/j.mcn.2015.01.002 · Cited by 101
The p97/VCP ATPase is critical in muscle atrophy and the accelerated degradation of muscle proteins
Piccirillo, R., & Goldberg, A. L. (2012) · The EMBO Journal · doi:10.1038/emboj.2012.178 · Cited by 85
The AAA+ chaperone VCP disaggregates Tau fibrils and generates aggregate seeds in a cellular system
Saha, I., Yuste‐Checa, P., Padilha, M. D. S., Guo, Q., Körner, R., Holthusen, H., Trinkaus, V. A., Dudanova, I., Fernández‐Busnadiego, R., Baumeister, W. P., et al. (2023) · Nature Communications · doi:10.1038/s41467-023-36058-2 · Cited by 93
Metadata
- Authors
- Tresse, E., Salomons, F. A., Vesa, J., Bott, L. C., Kimonis, V., Yao, T.-P., Dantuma, N. P., & Taylor, J. P.
- Affiliations
- St. Jude Children's Research Hospital (US)
- Karolinska Institutet (SE)
- University of California, Irvine (US)
- Corresponding author
- Taylor, J. Paul
- ORCID
- Venue
- Autophagy
- Publisher
- Informa UK Limited
- Published
- 2010-02-16
- Volume
- 6
- Issue
- 2
- Pages
- 217-227
- ISSN
- 1554-8627 (ISSN-L)
- 1554-8635
- PMC
- PMC2929010
- OpenAlex
- W2139772062
- Cited by
- 437
- References
- 38
- Citations by year
- 2026: 6 · 2025: 15 · 2024: 24 · 2023: 15 · 2022: 23 · 2021: 31 · 2020: 24 · 2019: 20 · 2018: 25 · 2017: 29 · 2016: 40 · 2015: 27 · 2014: 30 · 2013: 40 · 2012: 36
- FWCI
- 29.88
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- cc-by-nc
- Locations
- Autophagy (publishedVersion, cc-by-nc)
- PubMed (publishedVersion)
- PubMed Central (acceptedVersion)
- DukeSpace (Duke University) (submittedVersion, cc-by-nc-nd)
- eScholarship (California Digital Library) (submittedVersion, cc-by)
- Funders
- Dana Foundation
- Karolinska Institutet
- National Institutes of Health
- National Institute on Aging (R01AG031587, AG031587)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Autophagy in Disease and Therapy
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Ubiquitin and proteasome pathways
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Genetic Neurodegenerative Diseases
- Keywords
- VCP/p97, AAA+ ATPase, autophagosome maturation, LC3, LAMP1, LAMP2, proteasome inhibition, myoblasts
- MeSH terms
- Valosin Containing Protein, Adenosine Triphosphatases, Animals, Cathepsin B, Cells, Cultured, Humans, Microtubule-Associated Proteins, Mutation, Osteitis Deformans, Phagosomes, Recombinant Fusion Proteins, Syndrome, Vacuoles, Cell Cycle Proteins, Myositis, Inclusion Body, Ubiquitin, Myoblasts, RNA Interference, Proteasome Endopeptidase Complex, Mice, Lysosomal-Associated Membrane Protein 1, Lysosomal-Associated Membrane Protein 2, Frontotemporal Dementia
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review