Development of a Three-Dimensional Bioengineering Technology to Generate Lung Tissue for Personalized Disease Modeling
Open accessAbstract
Stem cell technologies, especially patient-specific, induced stem cell pluripotency and directed differentiation, hold great promise for changing the landscape of medical therapies. Proper exploitation of these methods may lead to personalized organ transplants, but to regenerate organs, it is necessary to develop methods for assembling differentiated cells into functional, organ-level tissues. The generation of three-dimensional human tissue models also holds potential for medical advances in disease modeling, as full organ functionality may not be necessary to recapitulate disease pathophysiology. This is specifically true of lung diseases where animal models often do not recapitulate human disease. Here, we present a method for the generation of self-assembled human lung tissue and its potential for disease modeling and drug discovery for lung diseases characterized by progressive and irreversible scarring such as idiopathic pulmonary fibrosis (IPF). Tissue formation occurs because of the overlapping processes of cellular adhesion to multiple alveolar sac templates, bioreactor rotation, and cellular contraction. Addition of transforming growth factor-β1 to single cell-type mesenchymal organoids resulted in morphologic scarring typical of that seen in IPF but not in two-dimensional IPF fibroblast cultures. Furthermore, this lung organoid may be modified to contain multiple lung cell types assembled into the correct anatomical location, thereby allowing cell-cell contact and recapitulating the lung microenvironment. Our bottom-up approach for synthesizing patient-specific lung tissue in a scalable system allows for the development of relevant human lung disease models with the potential for high throughput drug screening to identify targeted therapies.
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Organoid types grown in alginate include human lung, human brain, murine intestinal, human intestinal, human pancreatic, and human and murine vascular.
“Organoid types grown in alginate include human lung99,100, human brain101, murine intestinal102, human intestinal102,103, human pancreatic104, and human and murine vascular105.”
From Towards organoid culture without Matrigel (2021) · cites this paper as [99]
Several laboratories have grown a wide range of organoids in polysaccharides such as alginate or alginate-chitosan mixtures.
“In addition to organoids grown in naturally-derived proteins, several laboratories have grown a wide range of organoids in polysaccharides such as alginate or alginate-chitosan mixtures.”
From Towards organoid culture without Matrigel (2021) · cites this paper as [99]
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Cites
Mussel-inspired surface chemistry for multifunctional coatings
Lee, H., Dellatore, S. M., Miller, W. M., & Messersmith, P. B. (2007) · Science · doi:10.1126/science.1147241 · Cited by 10,965 · see citing works
Mechanisms of fibrosis: therapeutic translation for fibrotic disease
Wynn, T. A., & Ramalingam, T. R. (2012) · Nature Medicine · doi:10.1038/nm.2807 · Cited by 3,541 · see citing works
Alginate hydrogels as synthetic extracellular matrix materials
Rowley, J. A., Madlambayan, G., & Mooney, D. J. (1999) · Biomaterials · doi:10.1016/s0142-9612(98)00107-0 · Cited by 2,342 · see citing works
Selman, M., King, T. E., & Pardo, A. (2001) · Annals of Internal Medicine · doi:10.7326/0003-4819-134-2-200101160-00015 · Cited by 1,788 · see citing works
Type 2 alveolar cells are stem cells in adult lung
Barkauskas, C. E., Cronce, M. J., Rackley, C. R., Bowie, E. J., Keene, D. R., Stripp, B. R., Randell, S. H., Noble, P. W., & Hogan, B. L. M. (2013) · Journal of Clinical Investigation · doi:10.1172/jci68782 · Cited by 1,776 · see citing works
Moeller, A., Ask, K., Warburton, D., Gauldie, J., & Kolb, M. (2008) · The International Journal of Biochemistry & Cell Biology · doi:10.1016/j.biocel.2007.08.011 · Cited by 1,007 · see citing works
In vitro generation of human pluripotent stem cell derived lung organoids
Dye, B. R., Hill, D. R., Ferguson, M. A. H., Tsai, Y.-H., Nagy, M. S., Dyal, R., Wells, J. M., Mayhew, C. N., Nattiv, R., Klein, O. D., et al. (2015) · eLife · doi:10.7554/elife.05098 · Cited by 824 · see citing works
Lee, J., Bhang, D. H., Beede, A. M., Huang, T. L., Stripp, B. R., Bloch, K. D., Wagers, A. J., Tseng, Y., Ryeom, S. W., & Kim, C. F. (2014) · Cell · doi:10.1016/j.cell.2013.12.039 · Cited by 491 · see citing works
Vascularized and Complex Organ Buds from Diverse Tissues via Mesenchymal Cell-Driven Condensation
Takebe, T., Enomura, M., Yoshizawa, E., Kimura, M., Koike, H., Ueno, Y., Matsuzaki, T., Yamazaki, T., Toyohara, T., Osafune, K., et al. (2015) · Cell stem cell · doi:10.1016/j.stem.2015.03.004 · Cited by 454 · see citing works
Cell encapsulation using biopolymer gels for regenerative medicine
Hunt, N. C., & Grover, L. M. (2010) · Biotechnology Letters · doi:10.1007/s10529-010-0221-0 · Cited by 437 · see citing works
Epithelial-Mesenchymal Interactions in Pulmonary Fibrosis
Chapman, H. A. (2011) · Annual Review of Physiology · doi:10.1146/annurev-physiol-012110-142225 · Cited by 409 · see citing works
Idiopathic Pulmonary Fibrosis: Aberrant Recapitulation of Developmental Programs?
Selman, M., Pardo, A., & Kaminski, N. (2008) · PLoS Medicine · doi:10.1371/journal.pmed.0050062 · Cited by 334 · see citing works
Gotoh, S., Ito, I., Nagasaki, T., Yamamoto, Y., Konishi, S., Korogi, Y., Matsumoto, H., Muro, S., Hirai, T., Funato, M., et al. (2014) · Stem Cell Reports · doi:10.1016/j.stemcr.2014.07.005 · Cited by 328 · see citing works
Building and maintaining the epithelium of the lung
Rackley, C. R., & Stripp, B. R. (2012) · Journal of Clinical Investigation · doi:10.1172/jci60519 · Cited by 250 · see citing works
Engineering pulmonary vasculature in decellularized rat and human lungs
Ren, X., Moser, P. T., Gilpin, S. E., Okamoto, T., Wu, T., Tapias, L. F., Mercier, F., Xiong, L., Ghawi, R., Scadden, D. T., et al. (2015) · Nature Biotechnology · doi:10.1038/nbt.3354 · Cited by 222 · see citing works
Extracellular matrix biology in the lung
Dunsmore, S. E., & Rannels, D. E. (1996) · American Journal of Physiology-Lung Cellular and Molecular Physiology · doi:10.1152/ajplung.1996.270.1.l3 · Cited by 214 · see citing works
Gill, B. J., Gibbons, D. L., Roudsari, L. C., Saik, J. E., Rizvi, Z. H., Roybal, J. D., Kurie, J. M., & West, J. L. (2012) · Cancer Research · doi:10.1158/0008-5472.can-12-0895 · Cited by 170 · see citing works
Concise Review: Current Status of Stem Cells and Regenerative Medicine in Lung Biology and Diseases
Weiss, D. J. (2013) · Stem Cells · doi:10.1002/stem.1506 · Cited by 158 · see citing works
Electrostatic droplet generation: Mechanism of polymer droplet formation
Bugarski, B., Li, Q., Goosen, M. F. A., Poncelet, D., Neufeld, R. J., & Vunjak‐Novakovic, G. (1994) · AIChE Journal · doi:10.1002/aic.690400613 · Cited by 149 · see citing works
Selman, M., King, T. E., & Pardo, A. (2001) · Cited by 144 · see citing works
Cell-based tissue engineering for lung regeneration
Andrade, C., Wong, A. P., Waddell, T. K., Keshavjee, S. H., & Liu, M. (2006) · American Journal of Physiology-Lung Cellular and Molecular Physiology · doi:10.1152/ajplung.00175.2006 · Cited by 128 · see citing works
Hubbard, R. (2006) · Thorax · doi:10.1136/thx.2006.066050 · Cited by 110 · see citing works
Airway branching morphogenesis in three dimensional culture
Franzdóttir, S. R., Axelsson, I. T., Arason, A. J., Baldursson, Ó., Guðjónsson, Þ., & Magnússon, M. K. (2010) · Respiratory Research · doi:10.1186/1465-9921-11-162 · Cited by 103 · see citing works
Functional Analysis of Two Distinct Bronchiolar Progenitors during Lung Injury and Repair
Teisanu, R. M., Chen, H., Matsumoto, K., McQualter, J. L., Potts, E. N., Foster, W. M., Bertoncello, I., & Stripp, B. R. (2010) · American Journal of Respiratory Cell and Molecular Biology · doi:10.1165/rcmb.2010-0098oc · Cited by 95 · see citing works
Engineering of a Complex Organ: Progress Toward Development of a Tissue-engineered Lung
Nichols, J. E., & Cortiella, J. (2008) · Proceedings of the American Thoracic Society · doi:10.1513/pats.200802-022aw · Cited by 86 · see citing works
Idiopathic pulmonary fibrosis fibroblasts migrate and proliferate to CC chemokine ligand 21
Pierce, E. M., Carpenter, K. J., Jakubzick, C., Kunkel, S. L., Evanoff, H. L., Flaherty, K. R., Martínez, F. J., Toews, G. B., & Hogaboam, C. M. (2007) · European Respiratory Journal · doi:10.1183/09031936.00122806 · Cited by 81 · see citing works
Yu, X., Walsh, J., & Wei, M. (2014) · RSC Advances · doi:10.1039/c3ra44137g · Cited by 68 · see citing works
Carloni, A., Poletti, V. E., Fermo, L., Bellomo, N., & Chilosi, M. (2013) · Journal of Theoretical Biology · doi:10.1016/j.jtbi.2013.04.038 · Cited by 55 · see citing works
Singh, D., Zo, S. M., Kumar, A., & Han, S. S. (2013) · Journal of Biomaterials Science Polymer Edition · doi:10.1080/09205063.2012.759505 · Cited by 51 · see citing works
Sucre, J. M. S., Wilkinson, D., Vijayaraj, P., Paul, M. K., Dunn, B., Alva-Ornelas, J. A., & Gomperts, B. N. (2016) · American Journal of Physiology-Lung Cellular and Molecular Physiology · doi:10.1152/ajplung.00446.2015 · Cited by 50 · see citing works
Self-citationKarumbayaram, S., Lee, P., Azghadi, S. F., Cooper, A. R., Patterson, M., Kohn, D. B., Pyle, A. D., Clark, A. T., Byrne, J., Zack, J. A., et al. (2011) · Stem Cells Translational Medicine · doi:10.5966/sctm.2011-0001 · Cited by 48 · see citing works
Self-citationMiki, H., Mio, T., Nagai, S., Hoshino, Y., Nagao, T., Kitaichi, M., & Izumi, T. (2000) · American Journal of Respiratory and Critical Care Medicine · doi:10.1164/ajrccm.162.6.9812029 · Cited by 39 · see citing works
Zhang, W.-J., Lin, Q., Zhang, Y., Liu, C., Qiu, L., Wang, H., Wang, Y.-M., Duan, C., Liu, Z., Zhou, J., et al. (2010) · Journal of Cellular and Molecular Medicine · doi:10.1111/j.1582-4934.2010.01189.x · Cited by 34 · see citing works
Kaisani, A. A., Delgado, O., Fasciani, G., Kim, S. B., Wright, W. E., Minna, J. D., & Shay, J. W. (2014) · Differentiation · doi:10.1016/j.diff.2014.02.003 · Cited by 33 · see citing works
Shamis, Y., Silva, E. A., Hewitt, K. J., Brudno, Y., Levenberg, S., Mooney, D. J., & Garlick, J. A. (2013) · PLoS ONE · doi:10.1371/journal.pone.0083755 · Cited by 27 · see citing works
Fate of Distal Lung Epithelium Cultured in a Decellularized Lung Extracellular Matrix
Calle, E. A., Mendez, J. J., Ghaedi, M., Leiby, K. L., Bove, P. F., Herzog, E. L., Sundaram, S., & Niklason, L. E. (2015) · Tissue Engineering Part A · doi:10.1089/ten.tea.2014.0511 · Cited by 26 · see citing works
Flagged first, then by citations
Research works printed but not linked: 1
- [23]Samuel CS. Kidney research. In: Hewitson TD, Becker GJ, eds. Methods in Molecular Biology 2009;Vol 466 Totowa, NJ: Humana Press 223– 235.
Cited by
Sorted by citations
Idiopathic pulmonary fibrosis: Disease mechanisms and drug development
Spagnolo, P., Kropski, J. A., Jones, M. G., Lee, J. S., Rossi, G., Karampitsakos, Τ., Maher, T. M., Tzouvelekis, A., & Ryerson, C. J. (2020) · Pharmacology & Therapeutics · doi:10.1016/j.pharmthera.2020.107798 · Cited by 638 · see citing works
Next-generation cancer organoids
LeSavage, B. L., Suhar, R. A., Broguière, N., Lütolf, M. P., & Heilshorn, S. C. (2021) · Nature Materials · doi:10.1038/s41563-021-01057-5 · Cited by 462 · see citing works
Engineered materials for organoid systems
Kratochvil, M. J., Seymour, A. J., Li, T. L., Pașca, S. P., Kuo, C. J., & Heilshorn, S. C. (2019) · Nature Reviews Materials · doi:10.1038/s41578-019-0129-9 · Cited by 413 · see citing works
Towards organoid culture without Matrigel
Kozlowski, M. T., Crook, C. J., & Ku, H. T. (2021) · Communications Biology · doi:10.1038/s42003-021-02910-8 · Cited by 409 · see citing works
Multi-lineage human iPSC-derived platforms for disease modeling and drug discovery
Sharma, A., Sances, S., Workman, M. J., & Svendsen, C. N. (2020) · Cell Stem Cell · doi:10.1016/j.stem.2020.02.011 · Cited by 296 · see citing works
Modeling human diseases with induced pluripotent stem cells: from 2D to 3D and beyond
Liu, C., Oikonomopoulos, A., Sayed, N., & Wu, J. C. (2018) · Development · doi:10.1242/dev.156166 · Cited by 271 · see citing works
Human lung development: recent progress and new challenges
Nikolić, M., Sun, D., & Rawlins, E. L. (2018) · Development · doi:10.1242/dev.163485 · Cited by 230 · see citing works
Bioengineering Approaches for the Advanced Organoid Research
Yi, S. A., Zhang, Y., Rathnam, C., Pongkulapa, T., & Lee, K. (2021) · Advanced Materials · doi:10.1002/adma.202007949 · Cited by 218 · see citing works
Organoids: a systematic review of ethical issues
de Jongh, D., Massey, E. K., Berishvili, E., Fonseca, L. M., Lebreton, F., Bellofatto, K., Bignard, J., Seißler, J., Buerck, L. W.-V., Honarpisheh, M. M., et al. (2022) · Stem Cell Research & Therapy · doi:10.1186/s13287-022-02950-9 · Cited by 208 · see citing works
In Vitro Models to Study Human Lung Development, Disease and Homeostasis.
Miller, A. J., & Spence, J. (2017) · Physiology · doi:10.1152/physiol.00041.2016 · Cited by 166 · see citing works
In vitro biomimetic engineering of a human hematopoietic niche with functional properties
Bourgine, P. E., Klein, T., Paczulla, A., Shimizu, T., Kunz, L., Kokkaliaris, K. D., Coutu, D. L., Lengerke, C., Skoda, R. C., Schroeder, T., et al. (2018) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1805440115 · Cited by 153 · see citing works
Engineered cell and tissue models of pulmonary fibrosis
Sundarakrishnan, A., Chen, Y. G., Black, L. D., Aldridge, B. B., & Kaplan, D. L. (2017) · Advanced Drug Delivery Reviews · doi:10.1016/j.addr.2017.12.013 · Cited by 150 · see citing works
Gkatzis, K., Taghizadeh, S., Huh, D., Stainier, D. Y. R., & Bellusci, S. (2018) · European Respiratory Journal · doi:10.1183/13993003.00876-2018 · Cited by 128 · see citing works
Functional precision oncology using patient-derived assays: bridging genotype and phenotype
van Renterghem, A. W. J., van de Haar, J., & Voest, E. E. (2023) · Nature Reviews Clinical Oncology · doi:10.1038/s41571-023-00745-2 · Cited by 116 · see citing works
Advances in the Fabrication of Scaffold and 3D Printing of Biomimetic Bone Graft
Bisht, B., Hope, A., Mukherjee, A., & Paul, M. K. (2021) · Annals of Biomedical Engineering · doi:10.1007/s10439-021-02752-9 · Cited by 100 · see citing works
Self-citationOrganoids: a novel modality in disease modeling
Heydari, Z., Moeinvaziri, F., Agarwal, T., Pooyan, P., Shpichka, A. I., Maiti, T. K., Timashev, P. S., Baharvand, H., & Vosough, M. (2021) · Bio-Design and Manufacturing · doi:10.1007/s42242-021-00150-7 · Cited by 100 · see citing works
Airway organoids as models of human disease
van der Vaart, J., & Clevers, H. C. (2020) · Journal of Internal Medicine · doi:10.1111/joim.13075 · Cited by 97 · see citing works
Bioreactor Technologies for Enhanced Organoid Culture
Licata, J. P., Schwab, K. H., Har-el, Y.-E., Gerstenhaber, J. A., & Lelkes, P. I. (2023) · International Journal of Molecular Sciences · doi:10.3390/ijms241411427 · Cited by 99 · see citing works
Kim, S. K., Kim, Y. H., Park, S., & Cho, S. (2021) · Acta Biomaterialia · doi:10.1016/j.actbio.2021.03.002 · Cited by 92 · see citing works
Evans, K. V., & Lee, J. (2020) · Stem Cells Translational Medicine · doi:10.1002/sctm.19-0433 · Cited by 92 · see citing works
Bioengineered 3D Models to Recapitulate Tissue Fibrosis
Sacchi, M., Bansal, R., & Rouwkema, J. (2020) · Trends in biotechnology · doi:10.1016/j.tibtech.2019.12.010 · Cited by 91 · see citing works
Disease modeling of pulmonary fibrosis using human pluripotent stem cell-derived alveolar organoids
Suezawa, T., Kanagaki, S., Moriguchi, K., Masui, A., Nakao, K., Toyomoto, M., Tamai, K., Mikawa, R., Hirai, T., Murakami, K., et al. (2021) · Stem Cell Reports · doi:10.1016/j.stemcr.2021.10.015 · Cited by 91 · see citing works
3D organ models—Revolution in pharmacological research?
Weinhart, M., Hocke, A. C., Hippenstiel, S., Kurreck, J., & Hedtrich, S. (2018) · Pharmacological Research · doi:10.1016/j.phrs.2018.11.002 · Cited by 89 · see citing works
Regenerative Medicine in COVID-19 Treatment: Real Opportunities and Range of Promises
Basiri, A., Pazhouhnia, Z., Beheshtizadeh, N., Hoseinpour, M., Saghazadeh, A., & Rezaei, N. (2020) · Stem Cell Reviews and Reports · doi:10.1007/s12015-020-09994-5 · Cited by 81 · see citing works
Emerging delivery approaches for targeted pulmonary fibrosis treatment
Diwan, R., Bhatt, H., Beaven, E., & Nurunnabi, M. (2023) · Advanced Drug Delivery Reviews · doi:10.1016/j.addr.2023.115147 · Cited by 78 · see citing works
CNS organoids: an innovative tool for neurological disease modeling and drug neurotoxicity screening
Chhibber, T., Bagchi, S., Lahooti, B., Verma, A., Al-Ahmad, A. J., Paul, M. K., Pendyala, G., & Jayant, R. D. (2019) · Drug Discovery Today · doi:10.1016/j.drudis.2019.11.010 · Cited by 78 · see citing works
Self-citationHuman Pulmonary 3D Models For Translational Research
Zscheppang, K., Berg, J., Hedtrich, S., Verheyen, L., Wagner, D. E., Suttorp, N., Hippenstiel, S., & Hocke, A. C. (2017) · Biotechnology Journal · doi:10.1002/biot.201700341 · Cited by 76 · see citing works
Devarasetty, M., Mazzocchi, A. R., & Skardal, A. (2018) · BioDrugs · doi:10.1007/s40259-017-0258-x · Cited by 76 · see citing works
Hyperoxia Injury in the Developing Lung Is Mediated by Mesenchymal Expression of Wnt5A
Sucre, J. M. S., Vickers, K. C., Benjamin, J. T., Plosa, E. J., Jetter, C. S., Cutrone, A. M., Ransom, M. A., Anderson, Z. G., Sheng, Q., Fensterheim, B. A., et al. (2020) · American Journal of Respiratory and Critical Care Medicine · doi:10.1164/rccm.201908-1513oc · Cited by 74 · see citing works
Self-citationEngineered Plant‐Based Nanocellulose Hydrogel for Small Intestinal Organoid Growth
Curvello, R., Kerr, G., Micati, D., Chan, W. H., Raghuwanshi, V. S., Rosenbluh, J., Abud, H. E., & Garnier, G. (2020) · Advanced Science · doi:10.1002/advs.202002135 · Cited by 72 · see citing works
Lung Organoids and Their Use To Study Cell-Cell Interaction
Nikolić, M., & Rawlins, E. L. (2017) · Current Pathobiology Reports · doi:10.1007/s40139-017-0137-7 · Cited by 70 · see citing works
Organoids as a Powerful Model for Respiratory Diseases
Li, Y., Wu, Q., Sun, X., Shen, J., & Chen, H. (2020) · Stem Cells International · doi:10.1155/2020/5847876 · Cited by 66 · see citing works
Surolia, R., Li, F. J., Wang, Z., Li, H., Liu, G., Zhou, Y., Luckhardt, T., Bae, S., Liu, R.-M., Rangarajan, S., et al. (2017) · JCI Insight · doi:10.1172/jci.insight.91377 · Cited by 63 · see citing works
How to build a lung: latest advances and emerging themes in lung bioengineering
Santis, M. M. D., Bölükbas, D. A., Lindstedt, S., & Wagner, D. E. (2018) · European Respiratory Journal · doi:10.1183/13993003.01355-2016 · Cited by 61 · see citing works
Strategies to overcome the limitations of current organoid technology - engineered organoids
Fan, X., Hou, K., Liu, G., Shi, R., Wang, W., & Liang, G. (2025) · Journal of Tissue Engineering · doi:10.1177/20417314251319475 · Cited by 60 · see citing works
Preventing bronchopulmonary dysplasia: new tools for an old challenge
Álvarez-Fuente, M., Moreno, L., Mitchell, J. A., Reiss, I. K. M., López, P. B., Elorza, D., Duijts, L., Ávila-Álvarez, A., Arruza, L., Ramírez, M. R., et al. (2018) · Pediatric Research · doi:10.1038/s41390-018-0228-0 · Cited by 57 · see citing works
Advanced lung organoids for respiratory system and pulmonary disease modeling
Joo, H., Min, S., & Cho, S. (2024) · Journal of Tissue Engineering · doi:10.1177/20417314241232502 · Cited by 60 · see citing works
Breathing in vitro: Designs and applications of engineered lung models
Nossa, R., Costa, J. S., Cacopardo, L., & Ahluwalia, A. D. (2021) · Journal of Tissue Engineering · doi:10.1177/20417314211008696 · Cited by 55 · see citing works
Kiener, M., Roldán, N., Machahua, C., Sengupta, A., Geiser, T., Guenat, O. T., Funke-Chambour, M., Hobi, N., & Julio, M. K. (2021) · Frontiers in Medicine · doi:10.3389/fmed.2021.644678 · Cited by 52 · see citing works
Advancing lung organoids for COVID-19 research
van der Vaart, J., Lamers, M. M., Haagmans, B. L., & Clevers, H. C. (2021) · Disease Models & Mechanisms · doi:10.1242/dmm.049060 · Cited by 50 · see citing works
Successful Establishment of Primary Type II Alveolar Epithelium with 3D Organotypic Coculture
Sucre, J. M. S., Jetter, C. S., Loomans-Kropp, H. A., Williams, J. A., Plosa, E. J., Benjamin, J. T., Young, L. R., Kropski, J. A., Calvi, C. L., Kook, S., et al. (2018) · American Journal of Respiratory Cell and Molecular Biology · doi:10.1165/rcmb.2017-0442ma · Cited by 51 · see citing works
Self-citationThe evolution ofin vitromodels of lung fibrosis: promising prospects for drug discovery
Kolanko, E., Cargnoni, A., Papait, A., Silini, A. R., Czekaj, P., & Parolini, O. (2024) · European Respiratory Review · doi:10.1183/16000617.0127-2023 · Cited by 51 · see citing works
Faber, S. C., & McCullough, S. D. (2018) · Applied In Vitro Toxicology · doi:10.1089/aivt.2018.0002 · Cited by 50 · see citing works
Pluripotent Stem Cells: The Last 10 Years
Kimbrel, E. A., & Lanza, R. (2016) · Regenerative Medicine · doi:10.2217/rme-2016-0117 · Cited by 45 · see citing works
Chen, Y., Feng, J., Zhao, S., Han, L. K., Yang, H., Lin, Y., & Rong, Z. (2018) · Stem Cells and Development · doi:10.1089/scd.2018.0042 · Cited by 42 · see citing works
Applications of lung cancer organoids in precision medicine: from bench to bedside
Li, H., Chen, Z., Chen, N., Fan, Y., Xu, Y., & Xu, X. (2023) · Cell Communication and Signaling · doi:10.1186/s12964-023-01332-9 · Cited by 43 · see citing works
Sucre, J. M. S., Deutsch, G. H., Jetter, C. S., Ambalavanan, N., Benjamin, J. T., Gleaves, L. A., Millis, B. A., Young, L. R., Blackwell, T. S., Kropski, J. A., et al. (2018) · American Journal Of Pathology · doi:10.1016/j.ajpath.2017.12.004 · Cited by 41 · see citing works
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Gopal, S., Rodrigues, A. L., & Dordick, J. S. (2020) · Frontiers in Bioengineering and Biotechnology · doi:10.3389/fbioe.2020.00692 · Cited by 44 · see citing works
Developmental mechanisms and adult stem cells for therapeutic lung regeneration
Lee, J., & Rawlins, E. L. (2017) · Developmental Biology · doi:10.1016/j.ydbio.2017.09.016 · Cited by 41 · see citing works
Moreira, A., Müller, M., Costa, P. F., & Kohl, Y. (2021) · Advanced Biology · doi:10.1002/adbi.202101139 · Cited by 43 · see citing works
Human lung cell models to study aerosol delivery – considerations for model design and development
Rothen‐Rutishauser, B., Gibb, M., He, R., Petri‐Fink, A., & Sayes, C. M. (2022) · European Journal of Pharmaceutical Sciences · doi:10.1016/j.ejps.2022.106337 · Cited by 39 · see citing works
Sucre, J. M. S., Vijayaraj, P., Aros, C. J., Wilkinson, D., Paul, M. K., Dunn, B., Guttentag, S. H., & Gomperts, B. N. (2016) · American Journal of Physiology-Lung Cellular and Molecular Physiology · doi:10.1152/ajplung.00477.2016 · Cited by 39 · see citing works
Self-citationCastellani, S., Gioia, S. D., di Toma, L., & Conese, M. (2018) · Analytical Cellular Pathology · doi:10.1155/2018/3839803 · Cited by 37 · see citing works
Application of iPSC to Modelling of Respiratory Diseases
Calvert, B. A., & Ryan, A. L. (2019) · Advances in experimental medicine and biology · doi:10.1007/5584_2019_430 · Cited by 35 · see citing works
Lung Organoids—The Ultimate Tool to Dissect Pulmonary Diseases?
Bosáková, V., Zuani, M. D., Sládková, L., Garlíková, Z., Jose, S. S., Zelante, T., Kohoutková, M. H., & Frič, J. (2022) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2022.899368 · Cited by 35 · see citing works
Caracena, T., Blomberg, R., Hewawasam, R. S., Fry, Z. E., Riches, D. W. H., & Magin, C. M. (2022) · Biomaterials Science · doi:10.1039/d2bm00827k · Cited by 35 · see citing works
Alveolar Organoids in Lung Disease Modeling
Purev, E., Bahmed, K., & Kośmider, B. (2024) · Biomolecules · doi:10.3390/biom14010115 · Cited by 34 · see citing works
Modeling Progressive Fibrosis with Pluripotent Stem Cells Identifies an Anti-fibrotic Small Molecule
Vijayaraj, P., Minasyan, A., Durra, A., Karumbayaram, S., Mehrabi, M., Aros, C. J., Ahadome, S. D., Shia, D. W., Chung, K., Sandlin, J. M., et al. (2019) · Cell Reports · doi:10.1016/j.celrep.2019.11.019 · Cited by 33 · see citing works
Self-citationVazquez‐Armendariz, A. I., Barroso, M. M., Agha, E. E., & Herold, S. (2022) · Cells · doi:10.3390/cells11091526 · Cited by 35 · see citing works
Bessa, M. J., Brandão, F., Rosário, F., Moreira, L., Reis, A. T., Valdiglesias, V., Laffón, B., Fraga, S., & Teixeira, J. P. (2023) · Journal of Toxicology and Environmental Health Part B · doi:10.1080/10937404.2023.2166638 · Cited by 33 · see citing works
Ishikawa, S., Ishimori, K., & Ito, S. (2017) · Respiratory Research · doi:10.1186/s12931-017-0680-0 · Cited by 33 · see citing works
Organoid-based tissue engineering for advanced tissue repair and reconstruction
Hsiung, N., Ju, Y., Yang, K. C., Pu, Y., Zeng, W., Zhao, H., Zou, P., Ye, J., Yi, K., & Wang, X. (2025) · Materials Today Bio · doi:10.1016/j.mtbio.2025.102093 · Cited by 35 · see citing works
de Jongh, D., Massey, E. K., Cronin, A. J., Schermer, M., & Bunnik, E. M. (2022) · Transplant International · doi:10.3389/ti.2022.10751 · Cited by 31 · see citing works
Stem cell biology and regenerative medicine for neonatal lung diseases
Kang, M. H., & Thébaud, B. (2017) · Pediatric Research · doi:10.1038/pr.2017.232 · Cited by 30 · see citing works
Organoids as preclinical models of human disease: progress and applications
Chen, B., Du, C., Wang, M., Guo, J., & Liu, X. (2024) · Medical Review · doi:10.1515/mr-2023-0047 · Cited by 30 · see citing works
Hua, W., Mitchell, K., Kariyawasam, L. S., Do, C., Chen, J., Raymond, L., Valentin, N., Coulter, R., Yang, Y., & Jin, Y. (2022) · ACS Applied Materials & Interfaces · doi:10.1021/acsami.2c12465 · Cited by 29 · see citing works
Tissue-informed engineering strategies for modeling human pulmonary diseases
Bailey, K. E., Floren, M. L., D’Ovidio, T. J., Lammers, S. R., Stenmark, K. R., & Magin, C. M. (2018) · American Journal of Physiology-Lung Cellular and Molecular Physiology · doi:10.1152/ajplung.00353.2018 · Cited by 30 · see citing works
Lung Organoid on a Chip: A New Ensemble Model for Preclinical Studies
Kim, H., Park, S., Jeong, S., Kim, J., & Cho, Y. (2023) · International Journal of Stem Cells · doi:10.15283/ijsc23090 · Cited by 28 · see citing works
Advanced lung organoids and lung-on-a-chip for cancer research and drug evaluation: a review
Zhu, L., Zhang, J., Guo, Q., Kuang, J., Li, D., Wu, M., Mo, Y., Zhang, T., Gao, X., & Tan, J. (2023) · Frontiers in Bioengineering and Biotechnology · doi:10.3389/fbioe.2023.1299033 · Cited by 28 · see citing works
Ertaş, Y. N., Mahmoodi, M., Shahabipour, F., Jahed, V., Di̇ltemi̇z, S. E., Tutar, R., & Ashammakhi, N. A. (2021) · Emergent Materials · doi:10.1007/s42247-021-00165-x · Cited by 26 · see citing works
Wilkinson, D. C., Mellody, M., Meneses, L. K., Hope, A. C., Dunn, B., & Gomperts, B. N. (2018) · Current Protocols in Stem Cell Biology · doi:10.1002/cpsc.56 · Cited by 25 · see citing works
Self-citationThree-dimensional models of the lung: past, present and future: a mini review
Sen, C., Freund, D., & Gomperts, B. N. (2022) · Biochemical Society Transactions · doi:10.1042/bst20190569 · Cited by 23 · see citing works
Self-citationLung Organoids in Smoking Research: Current Advances and Future Promises
Agraval, H., & Chu, H. W. (2022) · Biomolecules · doi:10.3390/biom12101463 · Cited by 25 · see citing works
Chen, J., & Na, F. (2022) · Frontiers in Bioengineering and Biotechnology · doi:10.3389/fbioe.2022.1066869 · Cited by 25 · see citing works
Bronchial epithelial and airway smooth muscle cell interactions in health and disease
Abohalaka, R. (2023) · Heliyon · doi:10.1016/j.heliyon.2023.e19976 · Cited by 25 · see citing works
Sen, C., Koloff, C. R., Kundu, S., Wilkinson, D., Yang, J. M., Shia, D. W., Meneses, L. K., Rickabaugh, T. M., & Gomperts, B. N. (2023) · Frontiers in Pharmacology · doi:10.3389/fphar.2023.1211026 · Cited by 23 · see citing works
Self-citationShakir, S., Hackett, T., & Mostaço-Guidolin, L. B. (2022) · Frontiers in Bioengineering and Biotechnology · doi:10.3389/fbioe.2022.1011800 · Cited by 22 · see citing works
Moura, J. A., Meldrum, K., Doak, S. H., & Clift, M. J. D. (2023) · Seminars in Cell and Developmental Biology · doi:10.1016/j.semcdb.2022.12.006 · Cited by 24 · see citing works
Engineering Advanced In Vitro Models of Systemic Sclerosis for Drug Discovery and Development
Pieri, A. D., Korman, B. D., Jüngel, A., & Wuertz‐Kozak, K. (2021) · Advanced Biology · doi:10.1002/adbi.202000168 · Cited by 22 · see citing works
Pozzobon, M., D’Agostino, S., Roubelakis, M. G., Cargnoni, A., Gramignoli, R., Wolbank, S., Gindraux, F., Bollini, S., Kerdjoudj, H., Fénelon, M., et al. (2022) · Frontiers in Bioengineering and Biotechnology · doi:10.3389/fbioe.2022.961987 · Cited by 22 · see citing works
Multiomic Investigations into Lung Health and Disease
Blutt, S. E., Coarfa, C., Neu, J., & Pammi, M. (2023) · Microorganisms · doi:10.3390/microorganisms11082116 · Cited by 19 · see citing works
Stem Cells in Pulmonary Disease and Regeneration
Nadkarni, R. R., Abed, S., & Draper, J. S. (2017) · CHEST Journal · doi:10.1016/j.chest.2017.07.021 · Cited by 20 · see citing works
Organoid Model in Idiopathic Pulmonary Fibrosis
Lee, J. Y., Kim, J.-H., Hong, S., & Yang, S. (2020) · International Journal of Stem Cells · doi:10.15283/ijsc20093 · Cited by 19 · see citing works
Ghuloum, F. I., Johnson, C. A., Galdo, N. A. R., & Amer, M. H. (2022) · Materials Today Bio · doi:10.1016/j.mtbio.2022.100502 · Cited by 19 · see citing works
Montesi, S. B., Gómez, C. R., Beers, M. F., Brown, R., Chattopadhyay, I., Flaherty, K. R., Garcia, C. K., Gomperts, B. N., Hariri, L. P., Hogaboam, C. M., et al. (2023) · American Journal of Respiratory and Critical Care Medicine · doi:10.1164/rccm.202307-1154ws · Cited by 18 · see citing works
Self-citationLight-field tomographic fluorescence lifetime imaging microscopy
Ma, Y., Park, J., Huang, L., Sen, C., Burri, S., Bruschini, C. E., Yang, X., Cui, Q., Cameron, R. B., Fishbein, G. A., et al. (2024) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2402556121 · Cited by 18 · see citing works
Self-citationTowards an artificial human lung: modelling organ-like complexity to aid mechanistic understanding
Humbert, M. V., Spalluto, C. M., Bell, J., Blume, C., Conforti, F., Davies, E. R., Dean, L. S. N., Elkington, P. T., Haitchi, H. M., Jackson, C. L., et al. (2022) · European Respiratory Journal · doi:10.1183/13993003.00455-2022 · Cited by 18 · see citing works
Keshavan, S., Bannuscher, A., Drašler, B., Barošová, H., Petri‐Fink, A., & Rothen‐Rutishauser, B. (2023) · European Journal of Pharmaceutical Sciences · doi:10.1016/j.ejps.2023.106387 · Cited by 16 · see citing works
Do, T., Synan, L., Ali, G., & Gappa‐Fahlenkamp, H. (2022) · Stem Cell Research & Therapy · doi:10.1186/s13287-022-03134-1 · Cited by 16 · see citing works
Jurj, A. M., Paşca, S., Braicu, C., Rusu, I., Korban, S. S., & Berindan‐Neagoe, I. (2021) · Seminars in Cancer Biology · doi:10.1016/j.semcancer.2021.12.002 · Cited by 15 · see citing works
Bioengineering toolkits for potentiating organoid therapeutics
Park, S., & Cho, S. (2024) · Advanced Drug Delivery Reviews · doi:10.1016/j.addr.2024.115238 · Cited by 15 · see citing works
Fallert, L., Urigoitia-Asua, A., Cipitria, A., & de Aberasturi, D. J. (2024) · Nanoscale · doi:10.1039/d3nr06672j · Cited by 14 · see citing works
Development of apical out trophoblast stem cell derived organoids to model early human pregnancy
Zhou, J., Sheridan, M. A., Tian, Y., Dahlgren, K. J., Messler, M. J., Peng, T., Zhao, A., Ezashi, T., Schulz, L. C., Ulery, B. D., et al. (2025) · iScience · doi:10.1016/j.isci.2025.112099 · Cited by 14 · see citing works
Organoid: Biomedical application, biobanking, and pathways to translation
Sinha, A., Maibam, M., Jain, R., Aggarwal, K., Sahu, A. K., Gupta, P. K., Paul, S., Bisht, B., & Paul, M. K. (2025) · Heliyon · doi:10.1016/j.heliyon.2025.e43028 · Cited by 14 · see citing works
Self-citationDubois, C., Daumar, P., Aubel, C., Gauthier, J. B., Vidalinc, B., Mounetou, E., Penault-Llorca, F. M., & Bamdad, M. (2019) · Journal of Clinical Medicine · doi:10.3390/jcm8030397 · Cited by 14 · see citing works
Surfactant-free fabrication of pNIPAAm microgels in microfluidic devices
Hua, M., Du, Y., Song, J., Sun, M., & He, X. (2018) · Journal of materials research/Pratt's guide to venture capital sources · doi:10.1557/jmr.2018.364 · Cited by 13 · see citing works
Application of colloidal photonic crystals in study of organoids
Huang, K., Li, Q., Xue, Y., Wang, Q., Chen, Z., & Gu, Z. (2023) · Advanced Drug Delivery Reviews · doi:10.1016/j.addr.2023.115075 · Cited by 13 · see citing works
Jain, N., Bhushan, B. L. S., Natarajan, M., Mehta, R., Saini, D. K., & Chatterjee, K. (2024) · ACS Biomaterials Science & Engineering · doi:10.1021/acsbiomaterials.3c01499 · Cited by 12 · see citing works
Human pluripotent stem cells for the modelling and treatment of respiratory diseases
Goldsteen, P. A., Yoseif, C., Dolga, A. M., & Gosens, R. (2021) · European Respiratory Review · doi:10.1183/16000617.0042-2021 · Cited by 11 · see citing works
Three-Dimensional Airway Spheroids and Organoids for Cystic Fibrosis Research
Laselva, O., & Conese, M. (2021) · Journal of Respiration · doi:10.3390/jor1040022 · Cited by 11 · see citing works
- Authors
- Wilkinson, D. C., Alva-Ornelas, J. A., Sucre, J. M. S., Vijayaraj, P., Durra, A., Richardson, W., Jonas, S. J., Paul, M. K., Karumbayaram, S., Dunn, B., & Gomperts, B. N.
- Affiliations
- University of California, Los Angeles (US)
- Corresponding author
- Gomperts, Brigitte N.
- ORCID
- Venue
- Stem Cells Translational Medicine
- Publisher
- Oxford University Press (OUP)
- Published
- 2016-09-15
- Volume
- 6
- Issue
- 2
- Pages
- 622-633
- ISSN
- 2157-6564 (ISSN-L)
- 2157-6580
- PMC
- PMC5442826
- OpenAlex
- W2520176498
- Cited by
- 165
- References
- 36
- Citations by year
- 2026: 5 · 2025: 17 · 2024: 11 · 2023: 21 · 2022: 28 · 2021: 24 · 2020: 14 · 2019: 8 · 2018: 19 · 2017: 15 · 2016: 2
- FWCI
- 16.24
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- Locations
- Stem Cells Translational Medicine (publishedVersion, cc-by-nc)
- Europe PMC (PubMed Central) (publishedVersion, other-oa)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- eScholarship (California Digital Library) (submittedVersion)
- Funders
- National Science Foundation
- California Institute for Regenerative Medicine (12-02)
- National Institutes of Health
- University of California, Los Angeles
- National Institute of General Medical Sciences (GM114259-01, R01GM114259)
- Jonsson Comprehensive Cancer Center
- Eli and Edythe Broad Center of Regenerative Medicine and Stem Cell Research, University of California Los Angeles
- Topics
- Health Sciences › Medicine › Surgery › Tissue Engineering and Regenerative Medicine
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Pluripotent Stem Cells Research
- Physical Sciences › Engineering › Biomedical Engineering › 3D Printing in Biomedical Research
- Keywords
- lung organoids, idiopathic pulmonary fibrosis, disease modeling, TGF-β1, fibrosis, drug screening, personalized medicine, organ regeneration
- MeSH terms
- Cell Differentiation, Cells, Cultured, Fibroblasts, Humans, Lung, Organoids, Phenotype, Time Factors, Cell Culture Techniques, Cell Lineage, Bioreactors, Tissue Engineering, Transforming Growth Factor beta1, Idiopathic Pulmonary Fibrosis, Induced Pluripotent Stem Cells
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