Model-based approaches to neuroimaging: combining reinforcement learning theory with fMRI data
Abstract
The combination of functional magnetic resonance imaging (fMRI) with computational models for a given cognitive process provides a powerful framework for testing hypotheses about the neural computations underlying such processes in the brain. Here, we outline the steps involved in implementing this approach with reference to the application of reinforcement learning (RL) models that can account for human choice behavior during value‐based decision making. The model generates internal variables which can be used to construct fMRI predictor variables and regressed against individual subjects' fMRI data. The resulting regression coefficients reflect the strength of the correlation with blood oxygenation level dependent (BOLD) activity and the relevant internal variables from the model. In the second part of this review, we describe human neuroimaging studies that have employed this analysis strategy to identify brain regions involved in the computations mediating reward‐related decision making. Copyright © 2010 John Wiley & Sons, Ltd. This article is categorized under: Neuroscience > Cognition
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Trial-by-trial estimates of computational quantities, such as prediction errors or precisions, can be used as parametric modulators in a general linear model of fMRI data, an approach commonly referred to as model-based fMRI.
“For example, trial-by-trial estimates of computational quantities, such as prediction errors or precisions, can be used as parametric modulators in a general linear model (GLM) of fMRI data, an approach commonly referred to as “model-based fMRI” (114).”
From Can Bayesian Theories of Autism Spectrum Disorder Help Improve Clinical Practice? (2016) · cites this paper as [114]
Cites
Reinforcement Learning: An Introduction
Sutton, R. S., & Barto, A. G. (1998) · IEEE Transactions on Neural Networks · doi:10.1109/tnn.1998.712192 · Cited by 27,225 · see citing works
Reinforcement Learning: An Introduction
Sutton, R. S., & Barto, A. (2005) · IEEE Transactions on Neural Networks · doi:10.1109/tnn.2004.842673 · Cited by 25,263 · see citing works
A neural substrate of prediction and reward
Schultz, W., Dayan, P., & Montague, P. R. (1997) · Science · doi:10.1126/science.275.5306.1593 · Cited by 9,388 · see citing works
Rescorla, R. A. (1972) · Medical Entomology and Zoology · Cited by 7,268 · see citing works
Marr, D. (1982) · Cumulative Index of Computer Aided Architectural Design · Cited by 5,733 · see citing works
Barlow, H. B. (1983) · Journal of Mathematical Psychology · doi:10.1016/0022-2496(83)90030-5 · Cited by 5,502 · see citing works
Friston, K. J., Harrison, L., & Penny, W. (2003) · NeuroImage · doi:10.1016/s1053-8119(03)00202-7 · Cited by 4,583 · see citing works
Regret Theory: An Alternative Theory of Rational Choice Under Uncertainty
Loomes, G., & Sugden, R. (1982) · The Economic Journal · doi:10.2307/2232669 · Cited by 4,042 · see citing works
Meeting of minds: the medial frontal cortex and social cognition
Amodio, D. M., & Frith, C. D. (2006) · Nature Reviews Neuroscience · doi:10.1038/nrn1884 · Cited by 3,782 · see citing works
Regret in Decision Making under Uncertainty
Bell, D. E. (1982) · Operations Research · doi:10.1287/opre.30.5.961 · Cited by 3,037 · see citing works
Daw, N. D., Niv, Y., & Dayan, P. (2005) · Nature Neuroscience · doi:10.1038/nn1560 · Cited by 2,533 · see citing works
Cortical substrates for exploratory decisions in humans
Daw, N. D., O'Doherty, J. P., Dayan, P., Seymour, B., & Dolan, R. J. (2006) · Nature · doi:10.1038/nature04766 · Cited by 2,224 · see citing works
Self-citationLearning the value of information in an uncertain world
Behrens, T. E. J., Woolrich, M. W., Walton, M. E., & Rushworth, M. F. S. (2007) · Nature Neuroscience · doi:10.1038/nn1954 · Cited by 2,053 · see citing works
Zhang, B., Li, C., & Lin, N. (2020) · De Gruyter eBooks · doi:10.1515/9783110595567-011 · Cited by 1,939 · see citing works
Goal-directed instrumental action: contingency and incentive learning and their cortical substrates
Balleine, B. W., & Dickinson, A. (1998) · Neuropharmacology · doi:10.1016/s0028-3908(98)00033-1 · Cited by 1,541 · see citing works
Temporal difference models and reward-related learning in the human brain
O'Doherty, J. P., Dayan, P., Friston, K., Critchley, H., & Dolan, R. J. (2003) · Neuron · doi:10.1016/s0896-6273(03)00169-7 · Cited by 1,522 · see citing works
Self-citationAssociative learning of social value
Behrens, T. E. J., Hunt, L. T., Woolrich, M. W., & Rushworth, M. F. S. (2008) · Nature · doi:10.1038/nature07538 · Cited by 925 · see citing works
Temporal Prediction Errors in a Passive Learning Task Activate Human Striatum
McClure, S. M., Berns, G. S., & Montague, P. R. (2003) · Neuron · doi:10.1016/s0896-6273(03)00154-5 · Cited by 917 · see citing works
D., C. P., & Simon, H. A. (1980) · The American Journal of Psychology · doi:10.2307/1422381 · Cited by 773 · see citing works
Friston, K. J., & Stephan, K. E. (2007) · Synthese · doi:10.1007/s11229-007-9237-y · Cited by 673 · see citing works
Regret and its avoidance: a neuroimaging study of choice behavior
Coricelli, G., Critchley, H., Joffily, M., O’Doherty, J. P., Angela Sirigu, B., & Dolan, R. J. (2005) · Nature Neuroscience · doi:10.1038/nn1514 · Cited by 673 · see citing works
Self-citationO'Doherty, J., Critchley, H., Deichmann, R., & Dolan, R. J. (2003) · The Journal of Neuroscience · doi:10.1523/jneurosci.23-21-07931.2003 · Cited by 611 · see citing works
Self-citationMarreiros, A. C., Stephan, K. E., & Friston, K. J. (2010) · Scholarpedia · doi:10.4249/scholarpedia.9568 · Cited by 565 · see citing works
Learning and Computational Neuroscience: Foundations of Adaptive Networks
Gabriel, M., & Moore, J. (1990) · Cited by 519 · see citing works
Neural correlates of mentalizing-related computations during strategic interactions in humans
Hampton, A. N., Bossaerts, P. L., & O’Doherty, J. P. (2008) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0711099105 · Cited by 518 · see citing works
Self-citationModel‐Based fMRI and Its Application to Reward Learning and Decision Making
O’Doherty, J. P., Hampton, A. N., & Kim, H. (2007) · Annals of the New York Academy of Sciences · doi:10.1196/annals.1390.022 · Cited by 509 · see citing works
Self-citationMidbrain dopamine neurons encode decisions for future action
Morris, G., Nevet, A., Arkadir, D., Vaadia, E., & Bergman, H. (2006) · Nature Neuroscience · doi:10.1038/nn1743 · Cited by 503 · see citing works
Hampton, A. N., Bossaerts, P., & O’Doherty, J. P. (2006) · The Journal of Neuroscience · doi:10.1523/jneurosci.1010-06.2006 · Cited by 498 · see citing works
Self-citationActivity in human ventral striatum locked to errors of reward prediction
Pagnoni, G., Zink, C. F., Montague, P. R., & Berns, G. S. (2002) · Nature Neuroscience · doi:10.1038/nn802 · Cited by 451 · see citing works
Kim, H., Shinsuke Shimojo, A., & O’Doherty, J. P. (2006) · PLoS Biology · doi:10.1371/journal.pbio.0040233 · Cited by 447 · see citing works
Self-citationNonlinear dynamic causal models for fMRI
Stephan, K. E., Kasper, L., Harrison, L. M., Daunizeau, J., den Ouden, H. E. M., Breakspear, M., & Friston, K. J. (2008) · NeuroImage · doi:10.1016/j.neuroimage.2008.04.262 · Cited by 416 · see citing works
Gläscher, J., Hampton, A. N., & O'Doherty, J. P. (2009) · Cerebral Cortex · doi:10.1093/cercor/bhn098 · Cited by 387 · see citing works
Self-citationA Dual Role for Prediction Error in Associative Learning
den Ouden, H. E. M., Friston, K. J., Daw, N. D., McIntosh, A. R., & Stephan, K. E. (2009) · Cerebral Cortex · doi:10.1093/cercor/bhn161 · Cited by 306 · see citing works
Striatal activity underlies novelty-based choice in humans
Wittmann, B. C., Daw, N. D., Seymour, B., & Dolan, R. J. (2008) · Neuron · doi:10.1016/j.neuron.2008.04.027 · Cited by 277 · see citing works
Neural signature of fictive learning signals in a sequential investment task
Lohrenz, T. M., McCabe, K., Camerer, C. F., & Montague, P. R. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0608842104 · Cited by 263 · see citing works
Niv, Y., Daw, N. D., & Dayan, P. (2006) · Nature Neuroscience · doi:10.1038/nn0806-987 · Cited by 74 · see citing works
Formal Learning Theory Dissociates Brain Regions with Different Temporal Integration
Gläscher, J. P., & Büchel, C. (2005) · Neuron · doi:10.1016/j.neuron.2005.06.008 · Cited by 59 · see citing works
Self-citation
Flagged first, then by citations
Cited by
Sorted by citations
The role of metacognition in human social interactions
Frith, C. D. (2012) · Philosophical Transactions of the Royal Society B: Biological Sciences · doi:10.1098/rstb.2012.0123 · Cited by 407 · see citing works
Assessing inter individual differences with task related functional neuroimaging
Lebreton, M., Bavard, S., Daunizeau, J., & Palminteri, S. (2019) · Nature Human Behaviour · doi:10.1038/s41562-019-0681-8 · Cited by 160 · see citing works
Can Bayesian Theories of Autism Spectrum Disorder Help Improve Clinical Practice?
Haker, H., Schneebeli, M., & Stephan, K. E. (2016) · Frontiers in Psychiatry · doi:10.3389/fpsyt.2016.00107 · Cited by 130 · see citing works
Borst, J. P., Taatgen, N. A., & van Rijn, H. (2011) · NeuroImage · doi:10.1016/j.neuroimage.2011.05.084 · Cited by 33 · see citing works
- Authors
- Gläscher, J. P., & O'Doherty, J. P.
- Affiliations
- California Institute of Technology (US)
- ORCID
- Gläscher, Jan P.
- Venue
- WIREs Cognitive Science
- Publisher
- Wiley
- Published
- 2010-04-02
- Volume
- 1
- Issue
- 4
- Pages
- 501-510
- ISSN
- 1939-5078 (ISSN-L)
- 1939-5086
- OpenAlex
- W2016473481
- Cited by
- 104
- References
- 37
- Citations by year
- 2026: 2 · 2025: 5 · 2024: 4 · 2023: 9 · 2022: 4 · 2021: 18 · 2020: 7 · 2019: 11 · 2018: 8 · 2017: 6 · 2016: 8 · 2015: 7 · 2014: 2 · 2013: 5 · 2012: 5
- FWCI
- 2.91
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Wiley Interdisciplinary Reviews Cognitive Science (publishedVersion)
- PubMed (publishedVersion)
- Topics
- Life Sciences › Neuroscience › Cognitive Neuroscience › Neural and Behavioral Psychology Studies
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Neurotransmitter Receptor Influence on Behavior
- Life Sciences › Neuroscience › Cognitive Neuroscience › Functional Brain Connectivity Studies
- Keywords
- reinforcement learning models, value-based decision making, computational psychiatry, BOLD signal, internal variables, neural computation, choice behavior
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review