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miR-1, miR-10b, miR-155, and miR-191 are novel regulators of BDNF

Varendi, Kärt, Kumar, Anmol, Härma, Mari-Anne, Andressoo, Jaan-Olle·2014·Cellular and Molecular Life Sciences

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  1. [1]Abidin I Eysel UT Lessmann V Mittmann T Impaired GABAergic inhibition in the visual cortex of brain-derived neurotrophic factor heterozygous knockout mice J Physiol 2008 586 1885 1901 10.1113/jphysiol.2007.148627 18238806 PMC2375720 · DOI
  2. [2]Abidin I Kohler T Weiler E Zoidl G Eysel UT Lessmann V Mittmann T Reduced presynaptic efficiency of excitatory synaptic transmission impairs LTP in the visual cortex of BDNF-heterozygous mice Eur J Neurosci 2006 24 3519 3531 10.1111/j.1460-9568.2006.05242.x 17229100 · DOI
  3. [3]An JJ Gharami K Liao GY Woo NH Lau AG Vanevski F Torre ER Jones KR Feng Y Lu B Xu B Distinct role of long 3′ UTR BDNF mRNA in spine morphology and synaptic plasticity in hippocampal neurons Cell 2008 134 175 187 10.1016/j.cell.2008.05.045 18614020 PMC2527207 · DOI
  4. [4]Arvey A Larsson E Sander C Leslie CS Marks DS Target mRNA abundance dilutes microRNA and siRNA activity Mol Syst Biol 2010 6 363 10.1038/msb.2010.24 20404830 PMC2872614 · DOI
  5. [5]Baquet ZC Bickford PC Jones KR Brain-derived neurotrophic factor is required for the establishment of the proper number of dopaminergic neurons in the substantia nigra pars compacta J Neurosci 2005 25 6251 6259 10.1523/JNEUROSCI.4601-04.2005 15987955 PMC6725062 · DOI
  6. [6]Barrett LW Fletcher S Wilton SD Regulation of eukaryotic gene expression by the untranslated gene regions and other non-coding elements Cell Mol Life Sci 2012 69 3613 3634 10.1007/s00018-012-0990-9 22538991 PMC3474909 · DOI
  7. [7]Bartel DP MicroRNAs: genomics, biogenesis, mechanism, and function Cell 2004 116 281 297 10.1016/S0092-8674(04)00045-5 14744438 · DOI
  8. [8]Calabrese F Molteni R Maj PF Cattaneo A Gennarelli M Racagni G Riva MA Chronic duloxetine treatment induces specific changes in the expression of BDNF transcripts and in the subcellular localization of the neurotrophin protein Neuropsychopharmacology 2007 32 2351 2359 10.1038/sj.npp.1301360 17327885 · DOI
  9. [10]Castren E Berninger B Leingartner A Lindholm D Regulation of brain-derived neurotrophic factor mRNA levels in hippocampus by neuronal activity Prog Brain Res 1998 117 57 64 10.1016/S0079-6123(08)64007-8 9932400 · DOI
  10. [11]Chan JP Unger TJ Byrnes J Rios M Examination of behavioral deficits triggered by targeting Bdnf in fetal or postnatal brains of mice Neuroscience 2006 142 49 58 10.1016/j.neuroscience.2006.06.002 16844311 · DOI
  11. [12]Chen JF Mandel EM Thomson JM Wu Q Callis TE Hammond SM Conlon FL Wang DZ The role of microRNA-1 and microRNA-133 in skeletal muscle proliferation and differentiation Nat Genet 2006 38 228 233 10.1038/ng1725 16380711 PMC2538576 · DOI
  12. [13]Clow C Jasmin BJ Brain-derived neurotrophic factor regulates satellite cell differentiation and skeletal muscle regeneration Mol Biol Cell 2010 21 2182 2190 10.1091/mbc.E10-02-0154 20427568 PMC2893983 · DOI
  13. [15]Dluzen DE Anderson LI McDermott JL Kucera J Walro JM Striatal dopamine output is compromised within ± BDNF mice Synapse 2002 43 112 117 10.1002/syn.10027 11754489 · DOI
  14. [16]Donovan MJ Lin MI Wiegn P Ringstedt T Kraemer R Hahn R Wang S Ibanez CF Rafii S Hempstead BL Brain derived neurotrophic factor is an endothelial cell survival factor required for intramyocardial vessel stabilization Development 2000 127 4531 4540 11023857
  15. [17]Dunn KC Aotaki-Keen AE Putkey FR Hjelmeland LM ARPE-19, a human retinal pigment epithelial cell line with differentiated properties Exp Eye Res 1996 62 155 169 10.1006/exer.1996.0020 8698076 · DOI
  16. [18]Ebert MS Neilson JR Sharp PA MicroRNA sponges: competitive inhibitors of small RNAs in mammalian cells Nat Methods 2007 4 721 726 10.1038/nmeth1079 17694064 PMC3857099 · DOI · Paper page
  17. [19]Egan MF Kojima M Callicott JH Goldberg TE Kolachana BS Bertolino A Zaitsev E Gold B Goldman D Dean M Lu B Weinberger DR The BDNF val66met polymorphism affects activity-dependent secretion of BDNF and human memory and hippocampal function Cell 2003 112 257 269 10.1016/S0092-8674(03)00035-7 12553913 · DOI · Paper page
  18. [20]Ernfors P Ibanez CF Ebendal T Olson L Persson H Molecular cloning and neurotrophic activities of a protein with structural similarities to nerve growth factor: developmental and topographical expression in the brain Proc Natl Acad Sci USA 1990 87 5454 5458 10.1073/pnas.87.14.5454 2164684 PMC54343 · DOI · Paper page
  19. [23]Ferrer I Goutan E Marin C Rey MJ Ribalta T Brain-derived neurotrophic factor in Huntington disease Brain Res 2000 866 257 261 10.1016/S0006-8993(00)02237-X 10825501 · DOI
  20. [24]Filipowicz W Bhattacharyya SN Sonenberg N Mechanisms of post-transcriptional regulation by microRNAs: are the answers in sight? Nat Rev Genet 2008 9 102 114 10.1038/nrg2290 18197166 · DOI
  21. [25]Friedman LM Dror AA Mor E Tenne T Toren G Satoh T Biesemeier DJ Shomron N Fekete DM Hornstein E Avraham KB MicroRNAs are essential for development and function of inner ear hair cells in vertebrates Proc Natl Acad Sci USA 2009 106 7915 7920 10.1073/pnas.0812446106 19416898 PMC2683084 · DOI
  22. [26]Fukuchi M Tsuda M Involvement of the 3′-untranslated region of the brain-derived neurotrophic factor gene in activity-dependent mRNA stabilization J Neurochem 2010 115 1222 1233 10.1111/j.1471-4159.2010.07016.x 20874756 · DOI
  23. [27]Funakoshi H Frisen J Barbany G Timmusk T Zachrisson O Verge VM Persson H Differential expression of mRNAs for neurotrophins and their receptors after axotomy of the sciatic nerve J Cell Biol 1993 123 455 465 10.1083/jcb.123.2.455 8408225 PMC2119843 · DOI
  24. [28]Gentner B Schira G Giustacchini A Amendola M Brown BD Ponzoni M Naldini L Stable knockdown of microRNA in vivo by lentiviral vectors Nat Methods 2009 6 63 66 10.1038/nmeth.1277 19043411 · DOI
  25. [29]Grimson A Farh KK Johnston WK Garrett-Engele P Lim LP Bartel DP MicroRNA targeting specificity in mammals: determinants beyond seed pairing Mol Cell 2007 27 91 105 10.1016/j.molcel.2007.06.017 17612493 PMC3800283 · DOI · Paper page
  26. [31]Hofer M Pagliusi SR Hohn A Leibrock J Barde YA Regional distribution of brain-derived neurotrophic factor mRNA in the adult mouse brain EMBO J 1990 9 2459 2464 2369898 PMC552273
  27. [32]Huang EJ Reichardt LF Neurotrophins: roles in neuronal development and function Annu Rev Neurosci 2001 24 677 736 10.1146/annurev.neuro.24.1.677 11520916 PMC2758233 · DOI · Paper page
  28. [33]John B Enright AJ Aravin A Tuschl T Sander C Marks DS Human MicroRNA targets PLoS Biol 2004 2 e363 10.1371/journal.pbio.0020363 15502875 PMC521178 · DOI · Paper page
  29. [35]Kim HK Lee YS Sivaprasad U Malhotra A Dutta A Muscle-specific microRNA miR-206 promotes muscle differentiation J Cell Biol 2006 174 677 687 10.1083/jcb.200603008 16923828 PMC2064311 · DOI
  30. [36]Konopka W Kiryk A Novak M Herwerth M Parkitna JR Wawrzyniak M Kowarsch A Michaluk P Dzwonek J Arnsperger T Wilczynski G Merkenschlager M Theis FJ Kohr G Kaczmarek L Schutz G MicroRNA loss enhances learning and memory in mice J Neurosci 2010 30 14835 14842 10.1523/JNEUROSCI.3030-10.2010 21048142 PMC6633640 · DOI · Paper page
  31. [37]Korte M Carroll P Wolf E Brem G Thoenen H Bonhoeffer T Hippocampal long-term potentiation is impaired in mice lacking brain-derived neurotrophic factor Proc Natl Acad Sci USA 1995 92 8856 8860 10.1073/pnas.92.19.8856 7568031 PMC41066 · DOI · Paper page
  32. [38]Krek A Grun D Poy MN Wolf R Rosenberg L Epstein EJ MacMenamin P da Piedade I Gunsalus KC Stoffel M Rajewsky N Combinatorial microRNA target predictions Nat Genet 2005 37 495 500 10.1038/ng1536 15806104 · DOI · Paper page
  33. [39]Lagos-Quintana M Rauhut R Yalcin A Meyer J Lendeckel W Tuschl T Identification of tissue-specific microRNAs from mouse Curr Biol 2002 12 735 739 10.1016/S0960-9822(02)00809-6 12007417 · DOI · Paper page
  34. [41]Lau AG Irier HA Gu J Tian D Ku L Liu G Xia M Fritsch B Zheng JQ Dingledine R Xu B Lu B Feng Y Distinct 3′UTRs differentially regulate activity-dependent translation of brain-derived neurotrophic factor (BDNF) Proc Natl Acad Sci USA 2010 107 15945 15950 10.1073/pnas.1002929107 20733072 PMC2936648 · DOI
  35. [42]Lee ST Chu K Jung KH Kim JH Huh JY Yoon H Park DK Lim JY Kim JM Jeon D Ryu H Lee SK Kim M Roh JK miR-206 regulates brain-derived neurotrophic factor in Alzheimer disease model Ann Neurol 2012 72 269 277 10.1002/ana.23588 22926857 · DOI · Paper page
  36. [43]Lewis BP Burge CB Bartel DP Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets Cell 2005 120 15 20 10.1016/j.cell.2004.12.035 15652477 · DOI · Paper page
  37. [44]Lu B BDNF and activity-dependent synaptic modulation Learn Mem 2003 10 86 98 10.1101/lm.54603 12663747 PMC5479144 · DOI · Paper page
  38. [45]Lyons WE Mamounas LA Ricaurte GA Coppola V Reid SW Bora SH Wihler C Koliatsos VE Tessarollo L Brain-derived neurotrophic factor-deficient mice develop aggressiveness and hyperphagia in conjunction with brain serotonergic abnormalities Proc Natl Acad Sci USA 1999 96 15239 15244 10.1073/pnas.96.26.15239 10611369 PMC24804 · DOI
  39. [46]Mellios N Huang HS Grigorenko A Rogaev E Akbarian S A set of differentially expressed miRNAs, including miR-30a-5p, act as post-transcriptional inhibitors of BDNF in prefrontal cortex Hum Mol Genet 2008 17 3030 3042 10.1093/hmg/ddn201 18632683 PMC2722882 · DOI · Paper page
  40. [48]Moore MJ From birth to death: the complex lives of eukaryotic mRNAs Science 2005 309 1514 1518 10.1126/science.1111443 16141059 · DOI
  41. [50]Nakajo Y Miyamoto S Nakano Y Xue JH Hori T Yanamoto H Genetic increase in brain-derived neurotrophic factor levels enhances learning and memory Brain Res 2008 1241 103 109 10.1016/j.brainres.2008.08.080 18801341 · DOI · Paper page
  42. [51]Park H Poo MM Neurotrophin regulation of neural circuit development and function Nat Rev Neurosci 2013 14 7 23 10.1038/nrn3379 23254191 · DOI · Paper page
  43. [52]Peltier HJ Latham GJ Normalization of microRNA expression levels in quantitative RT-PCR assays: identification of suitable reference RNA targets in normal and cancerous human solid tissues RNA 2008 14 844 852 10.1261/rna.939908 18375788 PMC2327352 · DOI · Paper page
  44. [53]Poliseno L Salmena L Zhang J Carver B Haveman WJ Pandolfi PP A coding-independent function of gene and pseudogene mRNAs regulates tumour biology Nature 2010 465 1033 1038 10.1038/nature09144 20577206 PMC3206313 · DOI
  45. [54]Radzikinas K Aven L Jiang Z Tran T Paez-Cortez J Boppidi K Lu J Fine A Ai X A Shh/miR-206/BDNF cascade coordinates innervation and formation of airway smooth muscle J Neurosci 2011 31 15407 15415 10.1523/JNEUROSCI.2745-11.2011 22031887 PMC3222097 · DOI
  46. [55]Rios M Fan G Fekete C Kelly J Bates B Kuehn R Lechan RM Jaenisch R Conditional deletion of brain-derived neurotrophic factor in the postnatal brain leads to obesity and hyperactivity Mol Endocrinol 2001 15 1748 1757 10.1210/mend.15.10.0706 11579207 · DOI
  47. [56]Saetrom P Heale BS Snove O Jr Aagaard L Alluin J Rossi JJ Distance constraints between microRNA target sites dictate efficacy and cooperativity Nucleic Acids Res 2007 35 2333 2342 10.1093/nar/gkm133 17389647 PMC1874663 · DOI
  48. [57]Salmena L Poliseno L Tay Y Kats L Pandolfi PP A ceRNA hypothesis: the Rosetta Stone of a hidden RNA language? Cell 2011 146 353 358 10.1016/j.cell.2011.07.014 21802130 PMC3235919 · DOI · Paper page
  49. [58]Sandberg R Neilson JR Sarma A Sharp PA Burge CB Proliferating cells express mRNAs with shortened 3′ untranslated regions and fewer microRNA target sites Science 2008 320 1643 1647 10.1126/science.1155390 18566288 PMC2587246 · DOI · Paper page
  50. [61]Timmusk T Palm K Metsis M Reintam T Paalme V Saarma M Persson H Multiple promoters direct tissue-specific expression of the rat BDNF gene Neuron 1993 10 475 489 10.1016/0896-6273(93)90335-O 8461137 · DOI · Paper page
  51. [62]Timmusk T Persson H Metsis M Analysis of transcriptional initiation and translatability of brain-derived neurotrophic factor mRNAs in the rat brain Neurosci Lett 1994 177 27 31 10.1016/0304-3940(94)90036-1 7824176 · DOI
  52. [63]Trang T Beggs S Salter MW Brain-derived neurotrophic factor from microglia: a molecular substrate for neuropathic pain Neuron Glia Biology 2011 7 99 108 10.1017/S1740925X12000087 22613083 PMC3748035 · DOI · Paper page
  53. [64]Tyler WJ Alonso M Bramham CR Pozzo-Miller LD From acquisition to consolidation: on the role of brain-derived neurotrophic factor signaling in hippocampal-dependent learning Learn Mem 2002 9 224 237 10.1101/lm.51202 12359832 PMC2806479 · DOI
  54. [65]Yaffe D Saxel O Serial passaging and differentiation of myogenic cells isolated from dystrophic mouse muscle Nature 1977 270 725 727 10.1038/270725a0 563524 · DOI
  55. [66]Yajima Y Narita M Usui A Kaneko C Miyatake M Yamaguchi T Tamaki H Wachi H Seyama Y Suzuki T Direct evidence for the involvement of brain-derived neurotrophic factor in the development of a neuropathic pain-like state in mice J Neurochem 2005 93 584 594 10.1111/j.1471-4159.2005.03045.x 15836617 · DOI
  56. [67]Zhao Y Ransom JF Li A Vedantham V von Drehle M Muth AN Tsuchihashi T McManus MT Schwartz RJ Srivastava D Dysregulation of cardiogenesis, cardiac conduction, and cell cycle in mice lacking miRNA-1-2 Cell 2007 129 303 317 10.1016/j.cell.2007.03.030 17397913 · DOI
  57. [68]Zhao Y Samal E Srivastava D Serum response factor regulates a muscle-specific microRNA that targets Hand2 during cardiogenesis Nature 2005 436 214 220 10.1038/nature03817 15951802 · DOI
  58. [69]Zuccato C Ciammola A Rigamonti D Leavitt BR Goffredo D Conti L MacDonald ME Friedlander RM Silani V Hayden MR Timmusk T Sipione S Cattaneo E Loss of huntingtin-mediated BDNF gene transcription in Huntington’s disease Science 2001 293 493 498 10.1126/science.1059581 11408619 · DOI

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Authors
Varendi, K., Kumar, A., Härma, M.-A., & Andressoo, J.-O.
Venue
Cellular and Molecular Life Sciences
Published
2014-05-08
Volume
71
Issue
22
Pages
4443-4456
ISSN
  • 1420-682X
  • 1420-9071
Cited by
144
References
11
Language
en

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