A Pattern-Based Method for the Identification of MicroRNA Binding Sites and Their Corresponding Heteroduplexes

Miranda, Kevin C.; Huynh, Tien; Tay, Yvonne; Ang, Yen-Sin; Tam, Wai-Leong; Thomson, Andrew M.; Lim, Bing; Rigoutsos, Isidore

doi:10.1016/j.cell.2006.07.031

Cited by 1,739

A Pattern-Based Method for the Identification of MicroRNA Binding Sites and Their Corresponding Heteroduplexes

Miranda, Kevin C., Huynh, Tien, Tay, Yvonne, Ang, Yen-Sin, Tam, Wai-Leong, Thomson, Andrew M., Lim, Bing, Rigoutsos, Isidore·2006·Cell

DOI 10.1016/j.cell.2006.07.031

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Using RNA22 v2 predicted interactions, the number of predicted interactions increased from ~59,000 to ~184,000.
“The number of predicted interactions increased substantially, from ~59,000 to ~184,000, and we identified two additional miRNA-target pairs for which the SMR/HEIDI tests support pleiotropy or causality (Supplementary Table 12).”
From Mapping the microRNA landscape in the older adult brain and its genetic contribution to neuropsychiatric conditions (2024) · cites this paper as [30]
Two additional miRNA-target pairs had SMR/HEIDI tests supporting pleiotropy or causality.
“The number of predicted interactions increased substantially, from ~59,000 to ~184,000, and we identified two additional miRNA-target pairs for which the SMR/HEIDI tests support pleiotropy or causality (Supplementary Table 12).”
From Mapping the microRNA landscape in the older adult brain and its genetic contribution to neuropsychiatric conditions (2024) · cites this paper as [30]
It is very likely that most miRNAs have many, perhaps as many as a few thousand, mRNA targets.
“We also find that neurons express multiple miRNAs and it is very likely that most miRNAs have many, perhaps as many as a few thousand, mRNA targets [1,2,6,56].”
From MicroRNAs show a wide diversity of expression profiles in the developing and mature central nervous system (2007) · cites this paper as [2]

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Authors: Miranda, K. C., Huynh, T., Tay, Y., Ang, Y.-S., Tam, W.-L., Thomson, A. M., Lim, B., & Rigoutsos, I.
Venue: Cell
Publisher: Elsevier BV
Published: 2006-09
Volume: 126
Issue: 6
Pages: 1203-1217
ISSN: 0092-8674
DOI: 10.1016/j.cell.2006.07.031
Cited by: 1,739
References: 1
Language: en
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A Pattern-Based Method for the Identification of MicroRNA Binding Sites and Their Corresponding Heteroduplexes

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