Chromatin modifications and their function

Kouzarides, Tony·2007·Cell

Cited by (1,104)

Items 401–500 of 1,104

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  2. Structure of the p300 catalytic core and implications for chromatin targeting and HAT regulation
    Manuela Delvecchio, Jonathan Gaucher, Carmen Aguilar‐Gurrieri, Esther Martínez Ortega, Daniel Panne · 2013 · Nature Structural & Molecular Biology
  3. Histone acetylation by CBP and p300 at double-strand break sites facilitates SWI/SNF chromatin remodeling and the recruitment of non-homologous end joining factors
    Hideaki Ogiwara, Ayako Ui, A Otsuka, H. Satoh, I Yokomi, Satoshi Nakajima, Akira Yasui, Jun Yokota, Takashi Kohno · 2011 · Oncogene
  4. Copper-Mediated Amidation of Heterocyclic and Aromatic C−H Bonds
    Qiu Wang, Stuart L. Schreiber · 2009 · Organic Letters
  5. Regulation of constitutive and alternative splicing by PRMT5 reveals a role for Mdm4 pre-mRNA in sensing defects in the spliceosomal machinery
    Marco Bezzi, Shun Xie Teo, Julius Müller, Wei Chuen Mok, Sanjeeb Kumar Sahu, Leah A. Vardy, Zahid Bonday, Ernesto Guccione · 2013 · Genes & Development
  6. Transgenerational epigenetic inheritance in plants
    Marie‐Theres Hauser, Werner Aufsatz, Claudia Jonak, Christian Luschnig · 2011 · Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms
  7. Transcriptional and Epigenetic Regulation of Oligodendrocyte Development and Myelination in the Central Nervous System
    Ben Emery, Qing Richard Lu · 2015 · Cold Spring Harbor Perspectives in Biology
  8. Epigenetic changes during aging and their reprogramming potential
    Kane, Alice E., Sinclair, David A. · 2019 · Critical Reviews in Biochemistry and Molecular Biology
  9. Heterochromatin formation in the mouse embryo requires critical residues of the histone variant H3.3
    Angèle Santenard, Céline Ziegler-Birling, Marc Koch, Làszlò Tora, Andrew J. Bannister, Maria‐Elena Torres‐Padilla · 2010 · Nature Cell Biology
  10. The Potential of HDAC Inhibitors as Cognitive Enhancers
    Johannes Gräff, Li‐Huei Tsai · 2013 · The Annual Review of Pharmacology and Toxicology
  11. Mitochondrial complex ii: At the crossroads
    Bezawork-Geleta, Ayenachew, Rohlena, Jakub, Dong, Lanfeng, Pacak, Karel, Neuzil, Jiri · 2017 · Trends in Biochemical Sciences
  12. Rapid changes in histone deacetylases and inflammatory gene expression in expert meditators
    Kaliman, Perla, Álvarez-López, María Jesús, Cosín-Tomás, Marta, Rosenkranz, Melissa A., Lutz, Antoine, Davidson, Richard J. · 2014 · Psychoneuroendocrinology
  13. Role for Dpy-30 in ES Cell-Fate Specification by Regulation of H3K4 Methylation within Bivalent Domains
    Hao Jiang, Abhijit Shukla, Xiaoling Wang, Wei‐Yi Chen, B Bernstein, Robert G. Roeder · 2011 · Cell
  14. Single-molecule regulatory architectures captured by chromatin fiber sequencing
    Stergachis, Andrew B., Debo, Brian M., Haugen, Eric, Churchman, L. Stirling, Stamatoyannopoulos, John A. · 2020 · Science
  15. The Redox Basis of Epigenetic Modifications: From Mechanisms to Functional Consequences
    Anthony Roger Cyr, Frederick E. Domann · 2010 · Antioxidants and Redox Signaling
  16. Broad chromosomal domains of histone modification patterns in C. elegans
    Tao Liu, Andreas Rechtsteiner, Thea A. Egelhofer, Anne Vielle, Isabel Latorre, Ming-Sin Cheung, Sevinç Ercan, Kohta Ikegami, Morten Jensen, Paulina Kolasinska-Zwierz et al. · 2010 · Genome Research
  17. DNA Methylation: An Introduction to the Biology and the Disease-Associated Changes of a Promising Biomarker
    J. Tost · 2010 · Molecular Biotechnology
  18. Exercise-induced histone modifications in human skeletal muscle
    McGee, Sean L., Fairlie, Erin, Garnham, Andrew P., Hargreaves, Mark · 2009 · The Journal of Physiology
  19. Genomic views of STAT function in CD4+ T helper cell differentiation
    O'Shea, John J., Lahesmaa, Riitta, Vahedi, Golnaz, Laurence, Arian, Kanno, Yuka · 2011 · Nature Reviews Immunology
  20. The role of epigenetics in the pathology of diabetic complications
    Louisa M. Villeneuve, Rama D Natarajan · 2010 · American Journal of Physiology-Renal Physiology
  21. Epigenetic responses to environmental change and their evolutionary implications
    Bryan M. Turner · 2009 · Philosophical Transactions of the Royal Society B Biological Sciences
  22. Regulation of chromatin structure by long noncoding RNAs: focus on natural antisense transcripts
    Marco Magistri, Mohammad Ali Faghihi, Georges St. Laurent, Claes Wahlestedt · 2012 · Trends in Genetics
  23. Bromodomain inhibitors and cancer therapy: From structures to applications
    Montserrat Pérez-Salvia, Manel Esteller · 2016 · Epigenetics
  24. Protein arginine-methyltransferase-dependent oncogenesis
    N. Cheung, Li-Chong Chan, A. Thompson, M. Cleary, C. So · 2007 · Nature Cell Biology
  25. Target gene context influences the transcriptional requirement for the KAT3 family of CBP and p300 histone acetyltransferases
    David C. Bedford, Lawryn H. Kasper, Tomofusa Fukuyama, Paul K. Brindle · 2010 · Epigenetics
  26. Epigenetic principles and mechanisms underlying nervous system functions in health and disease
    Mark F. Mehler · 2008 · Progress in Neurobiology
  27. Advances in mass spectrometry-based clinical biomarker discovery
    Christopher A. Crutchfield, Stefani N. Thomas, Lori J. Sokoll, Daniel W. Chan · 2016 · Clinical Proteomics
  28. Requirement of the histone demethylase LSD1 in Snai1-mediated transcriptional repression during epithelial-mesenchymal transition
    Tianming Lin, Alison Ponn, Xin Hu, Brian Keith Law, Jianrong Lu · 2010 · Oncogene
  29. A CRISPR–dCas Toolbox for Genetic Engineering and Synthetic Biology
    Xiaoshu Xu, Lei S. Qi · 2018 · Journal of Molecular Biology
  30. Regulation of hippocampal H3 histone methylation by acute and chronic stress
    Hunter, Richard G., McCarthy, Katharine J., Milne, Thomas A., Pfaff, Donald W., McEwen, Bruce S. · 2009 · Proceedings of the National Academy of Sciences
  31. Chemical and Biochemical Perspectives of Protein Lysine Methylation
    Minkui Luo · 2018 · Chemical Reviews
  32. Certain and Progressive Methylation of Histone H4 at Lysine 20 during the Cell Cycle
    James J. Pesavento, Hongbo Yang, Neil L. Kelleher, Craig Andrew Mizzen · 2007 · Molecular and Cellular Biology
  33. The BRG1 transcriptional coregulator
    Kevin W. Trotter, Trevor Archer · 2008 · Nuclear Receptor Signaling
  34. Auxin signaling: Research advances over the past 30 years
    Zipeng Yu, Feng Zhang, Jiřı́ Friml, Zhaojun Ding · 2022 · Journal of Integrative Plant Biology
  35. Physiological and biochemical aspects of hydroxylations and demethylations catalyzed by human 2-oxoglutarate oxygenases
    Loenarz, Christoph, Schofield, Christopher J. · 2011 · Trends in Biochemical Sciences
  36. Epigenetics and Allergy: from Basic Mechanisms to Clinical Applications
    Daniel P. Potaczek, Hani Harb, Sven Michel, Bilal Alashkar Alhamwe, Harald E. Renz, Jörg Tost · 2017 · Epigenomics
  37. Discovery of an in Vivo Chemical Probe of the Lysine Methyltransferases G9a and GLP
    Feng Liu, Dalia Baršytė-Lovejoy, Fengling Li, Yan Xiong, Victoria Korneeva Korboukh, Xi‐Ping Huang, Abdellah Allali‐Hassani, William P. Janzen, Bryan L. Roth, Stephen V. Frye et al. · 2013 · Journal of Medicinal Chemistry
  38. The prdm family: expanding roles in stem cells and development
    Hohenauer, Tobias, Moore, Adrian W. · 2012 · Development
  39. Epigenetic suppression of GAD65 expression mediates persistent pain
    Zhi Zhang, You-Qing Cai, Fang Zou, Bihua Bie, Zhizhong Z. Pan · 2011 · Nature Medicine
  40. Signaling and Transcriptional Networks in Heart Development and Regeneration
    BG Bruneau · 2013 · Cold Spring Harbor Perspectives in Biology
  41. A phosphorylation-acetylation switch regulates STAT1 signaling
    Oliver Holger Krämer, Shirley K. Knauer, Georg Greiner, Enrico Jandt, Sigrid Reichardt, Karl‐Heinz Gührs, Roland H. Stauber, Frank‐D. Böhmer, Thorsten Heinzel · 2009 · Genes & Development
  42. Stable Isotope Labeling by Amino Acids in Cell Culture (SILAC) and Proteome Quantitation of Mouse Embryonic Stem Cells to a Depth of 5,111 Proteins
    Graumann, Johannes, Hubner, Nina C., Kim, Jeong Beom, Ko, Kinarm, Moser, Markus, Kumar, Chanchal, Cox, Jürgen, Schöler, Hans, Mann, Matthias · 2008 · Molecular & Cellular Proteomics
  43. Druggability Analysis and Structural Classification of Bromodomain Acetyl-lysine Binding Sites
    Lewis R. Vidler, Nathan Brown, Stefan Knapp, Swen Hoelder · 2012 · Journal of Medicinal Chemistry
  44. Regulation of NF-κB by NSD1/FBXL11-dependent reversible lysine methylation of p65
    Tao Lu, Mark W. Jackson, Benlian Wang, Maojing Yang, Mark R. Chance, Masaru Miyagi, Andrei V. Gudkov, George Robert Stark · 2009 · Proceedings of the National Academy of Sciences
  45. Replication Stress Interferes with Histone Recycling and Predeposition Marking of New Histones
    Zuzana Jasencakova, Annette N. D. Scharf, Katrine Ask, Armelle Corpet, Axel Imhof, Geneviève Almouzni, Anja Groth · 2010 · Molecular Cell
  46. Histone deacetylase inhibitors (HDACIs): multitargeted anticancer agents
    Paul Vincent Licciardi, Ververis, Hiong, Tom C. Karagiannis · 2013 · Biologics
  47. Identification of Lysine Succinylation Substrates and the Succinylation Regulatory Enzyme CobB in Escherichia coli
    Gozde Colak, Zhongyu Xie, Anita Y. Zhu, Lunzhi Dai, Zhike Lu, Yi Zhang, Xuelian Wan, Yue Chen, Yoon H. Cha, Hening Lin et al. · 2013 · Molecular & Cellular Proteomics
  48. Cfp1 integrates both CpG content and gene activity for accurate H3K4me3 deposition in embryonic stem cells
    Thomas Clouaire, Shaun Webb, Pete Skene, Robert Scott Illingworth, Alastair R. W. Kerr, Robert Andrews, Jeong‐Heon Lee, David G. Skalnik, Adrian Peter Bird · 2012 · Genes & Development
  49. Specificity and mechanism of JMJD2A, a trimethyllysine-specific histone demethylase
    Jean‐François Couture, Evys Collazo, Patricia A. Ortiz-Tello, J.S. Brunzelle, Raymond C. Trievel · 2007 · Nature Structural & Molecular Biology
  50. DOT1L, the H3K79 methyltransferase, is required for MLL-AF9-mediated leukemogenesis.
    A. Nguyen, O. Taranova, Jin-quan He, Yi Zhang · 2011 · Blood
  51. The functional diversity of protein lysine methylation
    Sylvain Lanouette, V. Mongeon, Daniel Figeys, Jean‐François Couture · 2014 · Molecular Systems Biology
  52. The central role of RNA in human development and cognition
    John S. Mattick · 2011 · FEBS Letters
  53. A Novel Mammalian Flavin-dependent Histone Demethylase
    Aristotele Karytinos, Federico Forneris, Antonella Profumo, Giuseppe Ciossani, Elena Battaglioli, Claudia Binda, Andrea Mattevi · 2009 · Journal of Biological Chemistry
  54. Epigenetics of Colorectal Cancer
    Ajay Goel, Clement Richard Boland · 2012 · Gastroenterology
  55. Epigenetic regulation of the histone-to-protamine transition during spermiogenesis
    Jianqiang Bao, Mark T. Bedford · 2016 · Reproduction
  56. Epigenetic Instability of Cytokine and Transcription Factor Gene Loci Underlies Plasticity of the T Helper 17 Cell Lineage
    Ryuta Mukasa, Anand Balasubramani, Yun Kyung Lee, Sarah K. Whitley, Benjamin T. Weaver, Yoichiro Shibata, Gregory E. Crawford, Robin D. Hatton, Casey Todd Weaver · 2010 · Immunity
  57. Structural Basis of Heterochromatin Formation by Human HP1
    Shinichi Machida, Yoshimasa Takizawa, Masakazu Ishimaru, Yukihiko Sugita, Satoshi Sekine, Jun‐ichi Nakayama, Matthias Wolf, Hitoshi Kurumizaka · 2018 · Molecular Cell
  58. Epigenetics of the male gamete
    Douglas T. Carrell · 2012 · Fertility and Sterility
  59. Histone Methyl Transferases and Demethylases; Can They Link Metabolism and Transcription?
    Raffaele Teperino, Kristina Schoonjans, Johan H. Auwerx · 2010 · Cell Metabolism
  60. The AREB1 Transcription Factor Influences Histone Acetylation to Regulate Drought Responses and Tolerance in Populus trichocarpa
    Shuang Li, Ying‐Chung Jimmy Lin, Pengyu Wang, Baofeng Zhang, Meng Li, Su Chen, Rui Shi, Sermsawat Tunlaya‐Anukit, Xinying Liu, Zhifeng Wang et al. · 2018 · The Plant Cell
  61. Histone Acetylation Regulates Intracellular pH
    McBrian, Matthew A., Behbahan, Iman Saramipoor, Ferrari, Roberto, Su, Trent, Huang, Ta-Wei, Li, Kunwu, Hong, Candice S., Christofk, Heather R., Vogelauer, Maria, Seligson, David B. et al. · 2013 · Molecular Cell
  62. Regulation of Transcription through Acetylation of H3K122 on the Lateral Surface of the Histone Octamer
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  63. The environment and male reproduction: The effect of cadmium exposure on reproductive function and its implication in fertility
    Cristina de Angelis, Mariano Galdiero, Claudia Pivonello, Ciro Salzano, Daniele Gianfrilli, Prisco Piscitelli, Andrea Lenzi, Annamaria Anita Livia Colao, Rosario Pivonello · 2017 · Reproductive Toxicology
  64. Plasticity in patterns of histone modifications and chromosomal proteins in Drosophila heterochromatin
    Nicole C. Riddle, Aki Minoda, Peter V. Kharchenko, Artyom A. Alekseyenko, Yuri B. Schwartz, Michael Yevgeniy Tolstorukov, Andrey A. Gorchakov, Jacob D. Jaffe, Cameron Kennedy, Daniela Linder-Basso et al. · 2010 · Genome Research
  65. Epigenetics of Host–Pathogen Interactions: The Road Ahead and the Road Behind
    E. Gómez-Díaz, Mireia Jordà, M. Peinado, A. Rivero · 2012 · PLoS Pathogens
  66. Advantages of next-generation sequencing versus the microarray in epigenetic research
    Paul J. Hurd, Christopher J. Nelson · 2009 · Briefings in Functional Genomics and Proteomics
  67. MLL2 Is Required in Oocytes for Bulk Histone 3 Lysine 4 Trimethylation and Transcriptional Silencing
    Claudia Andreu‐Vieyra, Ruihong Chen, Julio E. Agno, Stefan P. Glaser, Konstantinos Anastassiadis, A. Francis Stewart, Martin Matthew Matzuk · 2010 · PLoS Biology
  68. Cancer Epigenetics: Modifications, Screening, and Therapy
    Einav Nili Gal‐Yam, Yoshimasa Saito, Gerda Egger, Peter A. Jones · 2007 · Annual Review of Medicine
  69. Structural Biology of Human H3K9 Methyltransferases
    Wu, Hong, Min, Jinrong, Lunin, Vladimir V., Antoshenko, Tatiana, Dombrovski, Ludmila, Zeng, Hong, Allali-Hassani, Abdellah, Campagna-Slater, Valérie, Vedadi, Masoud, Arrowsmith, Cheryl H. et al. · 2010 · PLoS ONE
  70. Transcriptional and Epigenomic Regulation of Adipogenesis
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  71. Inhibition of specific HDACs and sirtuins suppresses pathogenesis in a Drosophila model of Huntington’s disease
    Judit Pallos, László Bodai, Tamás Lukácsovich, Judith M. Purcell, Joan S. Steffan, Leslie Michels Thompson, Joan Marsh · 2008 · Human Molecular Genetics
  72. Comparative genomics of transcription factors and chromatin proteins in parasitic protists and other eukaryotes
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  73. Imipramine Treatment and Resiliency Exhibit Similar Chromatin Regulation in the Mouse Nucleus Accumbens in Depression Models
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  74. H2A.Z: View from the Top
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  75. Aging Hallmarks and Progression and Age-Related Diseases: A Landscape View of Research Advancement
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  76. PARP1 ADP-ribosylates lysine residues of the core histone tails
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  77. Long‐lasting depression‐like behavior and epigenetic changes of BDNF gene expression induced by perinatal exposure to methylmercury
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  78. Polycomb PHF19 binds H3K36me3 and recruits PRC2 and demethylase NO66 to embryonic stem cell genes during differentiation
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  79. Aging and Chronic Sun Exposure Cause Distinct Epigenetic Changes in Human Skin
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  80. Histone demethylase Lsd1 represses hematopoietic stem and progenitor cell signatures during blood cell maturation
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  81. The matrix environmental and cell mechanical properties regulate cell migration and contribute to the invasive phenotype of cancer cells
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  82. Chromatin dynamics in the regulation of cell fate allocation during early embryogenesis
    Adam Burton, Maria‐Elena Torres‐Padilla · 2014 · Nature Reviews Molecular Cell Biology
  83. Epigenetic Temporal Control of Mouse Hox Genes in Vivo
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  84. In Vivo Residue-specific Histone Methylation Dynamics*
    Barry M. Zee, Rebecca S. Levin, Bo Xu, G. Leroy, N. Wingreen, B. Garcia · 2009 · Journal of Biological Chemistry
  85. DNA Methylation and Histone Modifications Regulate De Novo Shoot Regeneration in Arabidopsis by Modulating WUSCHEL Expression and Auxin Signaling
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  86. Zygotic Resetting of the HISTONE 3 Variant Repertoire Participates in Epigenetic Reprogramming in Arabidopsis
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  87. NuRD‐mediated deacetylation of H3K27 facilitates recruitment of Polycomb Repressive Complex 2 to direct gene repression
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  88. Epigenetic targets of bioactive dietary components for cancer prevention and therapy
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  89. Histone Modifications and Non-Coding RNAs: Mutual Epigenetic Regulation and Role in Pathogenesis
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  90. Histone modifications and dynamic regulation of genome accessibility in plants
    Pfluger, Jennifer, Wagner, Doris · 2007 · Current Opinion in Plant Biology
  91. Modeling gene expression using chromatin features in various cellular contexts
    Xianjun Dong, Melissa C. Greven, Anshul Bharat Kundaje, Sarah Djebali, James Brown, Chao Cheng, T Gingeras, Mark Gerstein, Roderic Guigó, Ewan Birney et al. · 2012 · Genome biology
  92. Lysine methylation of the NF-κB subunit RelA by SETD6 couples activity of the histone methyltransferase GLP at chromatin to tonic repression of NF-κB signaling
    Dan Levy, Alex J. Kuo, Yanqi Chang, Uwe Schaefer, Christopher Kitson, Peggie Cheung, Alexsandra B. Espejo, Barry M. Zee, Chih Long Liu, Stephanie Tangsombatvisit et al. · 2010 · Nature Immunology
  93. Chk1 Is a Histone H3 Threonine 11 Kinase that Regulates DNA Damage-Induced Transcriptional Repression
    Midori Shimada, Hiroyuki Niida, Doaa Hussein Zineldeen, Hideaki Tagami, Masafumi Tanaka, Hiroyuki Saito, Makoto Nakanishi · 2008 · Cell
  94. The HTLV-1 Tax interactome
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  95. Cutaneous Squamous Cell Carcinoma: From Pathophysiology to Novel Therapeutic Approaches
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  96. The Anti-Inflammatory Properties of Phytochemicals and Their Effects on Epigenetic Mechanisms Involved in TLR4/NF-κB-Mediated Inflammation
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  97. Detection of histone modifications at specific gene loci in single cells in histological sections
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  98. A Major Epigenetic Programming Mechanism Guided by piRNAs
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  99. Epigenetics and Colorectal Cancer Pathogenesis
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  100. The Current State of Chromatin Immunoprecipitation
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