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DeamiDATE 1.0: Site-specific deamidation as a tool to assess authenticity of members of ancient proteomes

Ramsøe, Abigail, van Heekeren, Vivian, Ponce, Paola, Fischer, Roman, Barnes, Ian, Speller, Camilla, Collins, Matthew J.·2020·Journal of Archaeological Science
DOI 10.1016/j.jas.2020.105080
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  • Ramsøe et al. developed a novel software tool (deamiDATE) to measure site-specific deamidation rates, based on previous work by van Doorn et al. exploring site-specific deamidation.

    “On the basis of the previous work by van Doorn et al. (84) exploring deamidation rates based on the presence of other amino acids adjacent to glutamine (site-specific deamidation), Ramsøe et al. (83) developed a novel software tool (deamiDATE) to measure these site-specific deamidation rates.”

    From Ancient protein analysis in archaeology (2021) · cites this paper as [83]

  • Deamidation patterns have been explored in multiple archeological substrates, such as collagen degradation in bone, keratin degradation in textiles, and food proteins from ancient dental calculus.

    “Deamidation patterns have therefore been explored in multiple archeological substrates, such as collagen degradation in bone (80, 81), keratin degradation in textiles (82), and food proteins from ancient dental calculus (83).”

    From Ancient protein analysis in archaeology (2021) · cites this paper as [83]

  • Deamidation of glutamine and asparagine has been extensively explored, and tools have been developed to identify patterns of deamidation associated with time.

    “Deamidation of glutamine and asparagine has been extensively explored (described above), and tools have been developed to identify patterns of deamidation associated with time”

    From Ancient protein analysis in archaeology (2021) · cites this paper as [83]

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Metadata

Authors
Ramsøe, A., van Heekeren, V., Ponce, P., Fischer, R., Barnes, I., Speller, C., & Collins, M. J.
Venue
Journal of Archaeological Science
Publisher
Elsevier BV
Published
2020-03
Volume
115
Pages
105080
ISSN
0305-4403
DOI
10.1016/j.jas.2020.105080
Cited by
72
References
7
Language
en
Licence
Funders
Arts and Humanities Research Council (AH/N005015/1)

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