Cited by 123Plant Molecular Biology ResearchPlant Parasitism and ResistanceDevelopmental Biology and Gene Regulation

The DOI matches its Crossref record; 51 of the 51 references it cites were found in a registry or an index.

How boundaries control plant development

Žádníková, Petra, Simon, Rüdiger·2014·Current Opinion in Plant Biology

DOI 10.1016/j.pbi.2013.11.013

Open this paper in CoChat — free account

Abstract

Continuous growth and organ development from the shoot apical meristem (SAM) requires a precise coordination of stem cell proliferation, commitment of stem cell descendants to diverse differentiation pathways and establishment of morphological meristem-to-organ boundaries. These complex biological processes require extensive integration of several components of cell-to-cell signaling and gene regulatory networks whose coordinated actions have an impact on cell division and growth. Here we review the current knowledge of gene networks involved in organogenesis from the SAM in higher plants. We focus on recent advances to show how the interaction between transcriptional regulators, hormonal crosstalk and physical stress regulates the establishment and maintenance of meristem-to-organ boundaries. Continuous growth and organ development from the shoot apical meristem (SAM) requires a precise coordination of stem cell proliferation, commitment of stem cell descendants to diverse differentiation pathways and establishment of morphological meristem-to-organ boundaries. These complex biological processes require extensive integration of several components of cell-to-cell signaling and gene regulatory networks whose coordinated actions have an impact on cell division and growth. Here we review the current knowledge of gene networks involved in organogenesis from the SAM in higher plants. We focus on recent advances to show how the interaction between transcriptional regulators, hormonal crosstalk and physical stress regulates the establishment and maintenance of meristem-to-organ boundaries.

Integrity signals

Registry

Crossref · 10.1016/j.pbi.2013.11.013

Cites

51 of 51 references verified0 citation errors · 0 not checkable

Statistics

Recomputing p-values needs the paper’s full text.

Claims the paper makes

We couldn’t retrieve this paper’s full text, so its claims and self-check weren’t run. The registry and citation checks still apply.

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

Mechanical Stress Acts via Katanin to Amplify Differences in Growth Rate between Adjacent Cells in Arabidopsis
Uyttewaal, M., Burian, A., Alim, K., Landrein, B., Borowska-Wykręt, D., Berne-Dedieu, A., Peaucelle, A., Ludynia, M., Traas, J. A., Boudaoud, A., et al. (2012) · Cell · doi:10.1016/j.cell.2012.02.048 · Cited by 483
Model for the regulation of Arabidopsis thaliana leaf margin development
Bilsborough, G. D., Runions, A., Barkoulas, M., Jenkins, H. W., Hasson, A., Galinha, C., Laufs, P., Hay, A., Prusinkiewicz, P., & Tsiantis, M. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1015162108 · Cited by 467
Alignment between PIN1 Polarity and Microtubule Orientation in the Shoot Apical Meristem Reveals a Tight Coupling between Morphogenesis and Auxin Transport
Heisler, M. G., Hamant, O., Krupinski, P., Uyttewaal, M., Ohno, C., Jönsson, H., Traas, J., & Meyerowitz, E. M. (2010) · PLoS Biology · doi:10.1371/journal.pbio.1000516 · Cited by 459
TCP Transcription Factors Regulate the Activities of ASYMMETRIC LEAVES1 and miR164, as Well as the Auxin Response, during Differentiation of Leaves inArabidopsis
Koyama, T., Mitsuda, N., Seki, M., Shinozaki, K., & Ohme‐Takagi, M. (2010) · The Plant Cell · doi:10.1105/tpc.110.075598 · Cited by 420
Cellulose synthase interactive protein 1 (CSI1) links microtubules and cellulose synthase complexes
Li, S., Lei, L., Somerville, C. R., & Gu, Y. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1118560109 · Cited by 331
LAX PANICLE2of Rice Encodes a Novel Nuclear Protein and Regulates the Formation of Axillary Meristems
Tabuchi, H., Zhang, Y., Hattori, S., Omae, M., Shimizu‐Sato, S., Oikawa, T., Qian, Q., Nishimura, M., Kitano, H., Xie, H., et al. (2011) · The Plant Cell · doi:10.1105/tpc.111.088765 · Cited by 271
Two-Step Regulation of LAX PANICLE1 Protein Accumulation in Axillary Meristem Formation in Rice
Oikawa, T., & Kyozuka, J. (2009) · The Plant Cell · doi:10.1105/tpc.108.065425 · Cited by 251
The maize SBP-box transcription factor encoded by tasselsheath4 regulates bract development and the establishment of meristem boundaries
Chuck, G. S., Whipple, C., Jackson, D. P., & Hake, S. (2010) · Development · doi:10.1242/dev.048348 · Cited by 243
Auxin-Dependent Cell Cycle Reactivation through Transcriptional Regulation of Arabidopsis E2Fa by Lateral Organ Boundary Proteins
Berckmans, B., Vassileva, V., Schmid, S. P. C., Maes, S., Parizot, B., Naramoto, S., Magyar, Z., Kamei, C. L. A., Koncz, C., Bögre, L., et al. (2011) · The Plant Cell · doi:10.1105/tpc.111.088377 · Cited by 239
Self-citation
In vivo analysis of local wall stiffness at the shoot apical meristem in Arabidopsis using atomic force microscopy
Milani, P., Gholamirad, M., Traas, J. A., Arnéodo, A., Boudaoud, A., Argoul, F., & Hamant, O. (2011) · The Plant Journal · doi:10.1111/j.1365-313x.2011.04649.x · Cited by 231
Brassinosteroids regulate organ boundary formation in the shoot apical meristem of Arabidopsis
Gendron, J. M., Liu, J.-S., Fan, M., Bai, M.-Y., Wenkel, S., Springer, P. S., Barton, M. K., & Wang, Z.-Y. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1210799110 · Cited by 205
Auxin at the Shoot Apical MeristemPreprint
Vernoux, T., Besnard, F., & Traas, J. A. (2010) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a001487 · Cited by 196
Arabidopsis LATERAL ORGAN BOUNDARIES negatively regulates brassinosteroid accumulation to limit growth in organ boundaries
Bell, E. M., Lin, W.-C., Husbands, A. Y., Yu, L., Jaganatha, V., Jablonska, B., Mangeon, A., Neff, M. M., Girke, T., & Springer, P. S. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1210789109 · Cited by 194
Plant development: A TALE story
Hamant, O., & Pautot, V. (2010) · Comptes Rendus Biologies · doi:10.1016/j.crvi.2010.01.015 · Cited by 191
The ASYMMETRIC LEAVES complex maintains repression of KNOX homeobox genes via direct recruitment of Polycomb-repressive complex2Preprint
Lodha, M., Marco, C. F., & Timmermans, M. C. P. (2013) · Genes & Development · doi:10.1101/gad.211425.112 · Cited by 173
LATERAL ORGAN FUSION1 and LATERAL ORGAN FUSION2 function in lateral organ separation and axillary meristem formation in Arabidopsis
Lee, D.-K., Geisler, M., & Springer, P. S. (2009) · Development · doi:10.1242/dev.031971 · Cited by 164
MACROCALYX and JOINTLESS Interact in the Transcriptional Regulation of Tomato Fruit Abscission Zone Development
Nakano, T., Kimbara, J., Fujisawa, M., Kitagawa, M., Ihashi, N., Maeda, H., Kasumi, T., & Ito, Y. (2011) · PLANT PHYSIOLOGY · doi:10.1104/pp.111.183731 · Cited by 162
Arabidopsis Class I KNOTTED-Like Homeobox Proteins Act Downstream in the IDA-HAE/HSL2 Floral Abscission Signaling Pathway
Shi, C., Stenvik, G., Vie, A. K., Bones, A. M., Pautot, V., Proveniers, M. C. G., Aalen, R. B., & Butenko, M. A. (2011) · The Plant Cell · doi:10.1105/tpc.111.084608 · Cited by 160
BLADE-ON-PETIOLE1 Coordinates Organ Determinacy and Axial Polarity in Arabidopsis by Directly Activating ASYMMETRIC LEAVES2
Jun, J. H., Ha, C. M., & Fletcher, J. C. (2010) · The Plant Cell · doi:10.1105/tpc.109.070763 · Cited by 150
CUP‐SHAPED COTYLEDON1 transcription factor activates the expression of LSH4 and LSH3 , two members of the ALOG gene family, in shoot organ boundary cells
Takeda, S., Hanano, K., Kariya, A., Shimizu, S., Zhao, L., Matsui, M., Tasaka, M., & Aida, M. (2011) · The Plant Journal · doi:10.1111/j.1365-313x.2011.04571.x · Cited by 146
A Mechanistic Link between STM and CUC1 during Arabidopsis Development
Spinelli, S. V., Martin, A. P., Viola, I. L., Gonzalez, D. H., & Palatnik, J. F. (2011) · Plant Physiology · doi:10.1104/pp.111.177709 · Cited by 145
Members of the LATERAL ORGAN BOUNDARIES DOMAIN Transcription Factor Family Are Involved in the Regulation of Secondary Growth inPopulus
Yordanov, Y. S., Regan, S., & Busov, V. B. (2010) · The Plant Cell · doi:10.1105/tpc.110.078634 · Cited by 142
JAGGED Controls Arabidopsis Petal Growth and Shape by Interacting with a Divergent Polarity Field
Sauret-Gueto, S., Schiessl, K., Bangham, A., Sablowski, R. W. M., & Coen, E. (2013) · PLoS Biology · doi:10.1371/journal.pbio.1001550 · Cited by 139
Differential Regulation of Cellulose Orientation at the Inner and Outer Face of Epidermal Cells in the Arabidopsis Hypocotyl
Crowell, E. F., Timpano, H., Desprez, T., Franssen-Verheijen, T., Emons, A. C., Höfte, H., & Vernhettes, S. (2011) · The Plant Cell · doi:10.1105/tpc.111.087338 · Cited by 130
The class I protein AtTCP15 modulates plant development through a pathway that overlaps with the one affected by CIN-like TCP proteins
Uberti‐Manassero, N. G., Lucero, L. E., Viola, I. L., Vegetti, A. C., & González, D. H. (2011) · Journal of Experimental Botany · doi:10.1093/jxb/err305 · Cited by 113
Auxin controls petal initiation in Arabidopsis
Lampugnani, E. R., Kilinc, A., & Smyth, D. R. (2012) · Development · doi:10.1242/dev.084582 · Cited by 109
Early inflorescence development in the grasses (Poaceae)
Kellogg, E. A., Câmara, P. E. A. S., Rudall, P. J., Ladd, P. G., Malcomber, S. T., Whipple, C., & Doust, A. N. (2013) · Frontiers in Plant Science · doi:10.3389/fpls.2013.00250 · Cited by 100
Genetic networks regulated by ASYMMETRIC LEAVES1 ( AS1 ) and AS2 in leaf development in Arabidopsis thaliana : KNOX genes control five morphological events
Ikezaki, M., Kojima, M., Sakakibara, H., Kojima, S., Ueno, Y., Machida, C., & Machida, Y. (2010) · The Plant Journal · doi:10.1111/j.1365-313x.2009.04033.x · Cited by 97
The rotation of cellulose synthase trajectories is microtubule dependent and influences the texture of epidermal cell walls in Arabidopsis hypocotyls
Chan, J., Crowell, E. F., Eder, M., Calder, G. M., Bunnewell, S., Findlay, K., Vernhettes, S., Höfte, H., & Lloyd, C. W. (2010) · Journal of Cell Science · doi:10.1242/jcs.074641 · Cited by 95
Antagonistic Interaction of BLADE-ON-PETIOLE1 and 2 with BREVIPEDICELLUS and PENNYWISE Regulates Arabidopsis Inflorescence Architecture
Khan, M., Xu, M., Murmu, J., Tabb, P., Liu, Y., Storey, K. M., McKim, S. M., Douglas, C. J., & Hepworth, S. R. (2011) · PLANT PHYSIOLOGY · doi:10.1104/pp.111.188573 · Cited by 94
NO APICAL MERISTEM ( MtNAM ) regulates floral organ identity and lateral organ separation in Medicago truncatula
Cheng, X., Peng, J., Ma, J., Tang, Y., Chen, R., Mysore, K. S., & Wen, J. (2012) · New Phytologist · doi:10.1111/j.1469-8137.2012.04147.x · Cited by 93
ORGAN BOUNDARY1 defines a gene expressed at the junction between the shoot apical meristem and lateral organs
Cho, E., & Zambryski, P. C. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1018542108 · Cited by 91
Arabidopsis JAGGED LATERAL ORGANS Acts with ASYMMETRIC LEAVES2 to Coordinate KNOX and PIN Expression in Shoot and Root Meristems
Rast, M. I., & Simon, R. (2012) · The Plant Cell · doi:10.1105/tpc.112.099978 · Cited by 89
Self-citation
RBE controls microRNA164 expression to effect floral organogenesis
Huang, T., López‐Giráldez, F., Townsend, J. P., & Irish, V. F. (2012) · Development · doi:10.1242/dev.075069 · Cited by 86
Organ abscission: exit strategies require signals and moving traffic
Liljegren, S. J. (2012) · Current Opinion in Plant Biology · doi:10.1016/j.pbi.2012.09.012 · Cited by 84
PETAL LOSS is a boundary gene that inhibits growth between developing sepals in Arabidopsis thaliana
Lampugnani, E. R., Kilinc, A., & Smyth, D. R. (2012) · The Plant Journal · doi:10.1111/j.1365-313x.2012.05023.x · Cited by 83
Organogenesis from stem cells in planta: multiple feedback loops integrating molecular and mechanical signals
Besnard, F., Vernoux, T., & Hamant, O. (2011) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-011-0732-4 · Cited by 71
BLADE-ON-PETIOLE1 and 2 regulate Arabidopsis inflorescence architecture in conjunction with homeobox genes KNAT6 and ATH1
Khan, M., Tabb, P., & Hepworth, S. R. (2012) · Plant Signaling & Behavior · doi:10.4161/psb.20599 · Cited by 63
Control of Arabidopsis Leaf Morphogenesis Through Regulation of the YABBY and KNOX Families of Transcription Factors
Ha, C. M., Jun, J. H., & Fletcher, J. C. (2010) · Genetics · doi:10.1534/genetics.110.118703 · Cited by 62
Arabidopsis and Tobacco SUPERMAN regulate hormone signalling and mediate cell proliferation and differentiation
Nibau, C., Stilio, V. S. D., Wu, H., & Cheung, A. Y. (2010) · Journal of Experimental Botany · doi:10.1093/jxb/erq325 · Cited by 62
Impaired Cellulose Synthase Guidance Leads to Stem Torsion and Twists Phyllotactic Patterns in Arabidopsis
Landrein, B., Lathe, R. S., Bringmann, M., Vouillot, C., Ivakov, A. A., Boudaoud, A., Persson, S., & Hamant, O. (2013) · Current Biology · doi:10.1016/j.cub.2013.04.013 · Cited by 59
JAGGED LATERAL ORGAN (JLO) controls auxin dependent patterning during development of the Arabidopsis embryo and root
Bureau, M., Rast, M. I., Illmer, J., & Simon, R. (2010) · Plant Molecular Biology · doi:10.1007/s11103-010-9688-2 · Cited by 56
Self-citation
Cellulose synthase interactive protein 1 (CSI1) mediates the intimate relationship between cellulose microfibrils and cortical microtubules
Lei, L., Li, S., & Gu, Y. (2012) · Plant Signaling & Behavior · doi:10.4161/psb.20338 · Cited by 52
Arabidopsis ASL11/LBD15 is involved in shoot apical meristem development and regulates WUS expression
Sun, X., Feng, Z., Meng, L., Zhu, J., & Geitmann, A. (2013) · Planta · doi:10.1007/s00425-013-1844-x · Cited by 49
DEVELOPMENT-RELATED PcG TARGET IN THE APEX 4 controls leaf margin architecture in Arabidopsis thaliana
Engelhorn, J., Reimer, J. J., Leuz, I., Göbel, U., Hüettel, B., Farrona, S., & Turck, F. (2012) · Development · doi:10.1242/dev.078618 · Cited by 37
KNAT1, KNAT2 and KNAT6 act downstream in the IDA-HAE/HSL2 signaling pathway to regulate floral organ abscission
Butenko, M. A., Shi, C., & Aalen, R. B. (2012) · Plant Signaling & Behavior · doi:10.4161/psb.7.1.18379 · Cited by 32
Direct activation ofEXPANSIN14by LBD18 in the gene regulatory network of lateral root formation in Arabidopsis
Kim, J., & Lee, H. W. (2013) · Plant Signaling & Behavior · doi:10.4161/psb.22979 · Cited by 32
The ATP-Binding Cassette Transporter ABCB19 Regulates Postembryonic Organ Separation in Arabidopsis
Zhao, H., Liu, L., Mo, H., Qian, L., Cao, Y., Cui, S., Li, X., & Ma, L. (2013) · PLoS ONE · doi:10.1371/journal.pone.0060809 · Cited by 26
Plant Development: Brassinosteroids Go Out of Bounds
Arnaud, N., & Laufs, P. (2013) · Current Biology · doi:10.1016/j.cub.2013.01.001 · Cited by 16
Boundary genes in regulation and evolution of secondary growth
Yordanov, Y. S., & Busov, V. B. (2011) · Plant Signaling & Behavior · doi:10.4161/psb.6.5.14973 · Cited by 10
Growing Cells Push Back under Pressure
Gibson, W. T., & Gibson, M. C. (2012) · Cell · doi:10.1016/j.cell.2012.03.019 · Cited by 7

Sorted by citations

Leaf development and morphogenesis
Bar, M., & Ori, N. (2014) · Development · doi:10.1242/dev.106195 · Cited by 281
Shaping plant architecture
Teichmann, T., & Muhr, M. (2015) · Frontiers in Plant Science · doi:10.3389/fpls.2015.00233 · Cited by 228
“This zone is not just a border but fulfills an important function in meristem maintenance and organ development (Zadnikova and Simon, 2014).”
Background
What lies beyond the eye: the molecular mechanisms regulating tomato fruit weight and shape
van der Knaap, E., Chakrabarti, M., Chu, Y., Clevenger, J. P., Illa-Berenguer, E., Huang, Z., Keyhaninejad, N., Mu, Q., Sun, L., Wang, Y., et al. (2014) · Frontiers in Plant Science · doi:10.3389/fpls.2014.00227 · Cited by 248
HAWAIIAN SKIRT controls size and floral organ number by modulating CUC1 and CUC2 expression
González-Carranza, Z. H., Zhang, X., Peters, J. L., Boltz, V., Szécsi, J., Bendahmane, M., & Roberts, J. A. (2017) · PLoS ONE · doi:10.1371/journal.pone.0185106 · Cited by 117
Auxin and Flower Development: A Blossoming FieldPreprint
Cucinotta, M., Cavalleri, A., Chandler, J., & Colombo, L. (2020) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a039974 · Cited by 118

See all 123

Authors: Žádníková, P., & Simon, R.
Affiliations: Cluster of Excellence on Plant Sciences (DE)
Corresponding author: Simon, Rüdiger
ORCID: Žádníková, Petra
Simon, Rüdiger
Venue: Current Opinion in Plant Biology
Publisher: Elsevier BV
Published: 2014-02
Volume: 17
Pages: 116-125
ISSN: 1369-5266 (ISSN-L)
DOI: 10.1016/j.pbi.2013.11.013
OpenAlex: W2082421148
Cited by: 121
References: 51
Citations by year: 2026: 6 · 2025: 7 · 2024: 11 · 2023: 7 · 2022: 8 · 2021: 12 · 2020: 12 · 2019: 6 · 2018: 9 · 2017: 11 · 2016: 11 · 2015: 13 · 2014: 8
FWCI: 1.14
Type: journal article
Language: en
Open access: closed
Licence: www.elsevier.com/tdm/userlicense/1.0/ (tdm)
Locations: Current Opinion in Plant Biology (publishedVersion)
PubMed (publishedVersion)
Kölner Universitäts PublikationsServer (Universität zu Köln) (publishedVersion)
Topics: Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant Molecular Biology Research
Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant Parasitism and Resistance
Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Developmental Biology and Gene Regulation
Keywords: shoot apical meristem, organogenesis, stem cell proliferation, cell-to-cell signaling, gene regulatory networks, transcription factors, hormone crosstalk, physical stress, plant organ development
MeSH terms: Models, Biological, Plant Proteins, Stem Cells, Gene Expression Regulation, Plant, Gene Expression Regulation, Developmental, Meristem, Plant Shoots, Cell Proliferation, Gene Regulatory Networks, Plant Development

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review

How boundaries control plant development

Abstract

Overview

Integrity signals

Verification

Claims the paper makes

Claims other papers make about this one

Citations

Cites

Cited by

Related

Metadata

Record

About these checks