The DOI matches its Crossref record; 58 of the 58 references it cites were found in a registry or an index.
Dephosphorylation of d-Peptide Derivatives to Form Biofunctional, Supramolecular Nanofibers/Hydrogels and Their Potential Applications for Intracellular Imaging and Intratumoral Chemotherapy
Open accessAbstract
D-Peptides, as the enantiomers of the naturally occurring L-peptides, usually resist endogenous proteases and are presumably insensitive to most enzymes. But, it is unclear whether or how a phosphatase catalyzes the dephosphorylation from D-peptides. In this work, we examine the formation of the nanofibers of D-peptides via enzymatic dephosphorylation. By comparing the enzymatic hydrogelation of L-peptide and D-peptide based hydrogelators, we find that the chirality of the precursors of the hydrogelators affects little on the enzymatic hydrogelation resulted from the removal of the phosphate group from a tyrosine phosphate residue. The attachment of a therapeutic agent (e.g., taxol) or a fluorophore (e.g., 4-nitro-2,1,3-benzoxadiazole) to the D-peptide based hydrogelators affords a new type of biostable or biocompatible hydrogelators, which may find applications in intratumoral chemotherapy or intracellular imaging, respectively. This work, as the first comprehensive and systematic study of the unexpected enzymatic dephosphorylation of D-peptides, illustrates a useful approach to generate supramolecular hydrogels that have both biostability and other desired functions.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Whitesides, G. M., & Grzybowski, B. (2002) · Science · doi:10.1126/science.1070821 · Cited by 7,439
Lehn, J. (1988) · Angewandte Chemie International Edition in English · doi:10.1002/anie.198800891 · Cited by 3,856
Self-Assembly and Mineralization of Peptide-Amphiphile Nanofibers
Hartgerink, J. D., Beniash, E., & Stupp, S. I. (2001) · Science · doi:10.1126/science.1063187 · Cited by 3,601
Low Molecular Mass Gelators of Organic Liquids and the Properties of Their Gels
Terech, P., & Weiss, R. G. (1997) · Chemical Reviews · doi:10.1021/cr9700282 · Cited by 3,130
Water Gelation by Small Organic Molecules
Estroff, L. A., & Hamilton, A. D. (2004) · Chemical Reviews · doi:10.1021/cr0302049 · Cited by 2,034
Self‐assembly of peptide amphiphiles: From molecules to nanostructures to biomaterials
Cui, H., Webber, M. J., & Stupp, S. I. (2010) · Peptide Science · doi:10.1002/bip.21328 · Cited by 1,549
(2000) · Cited by 1,342
Extensive neurite outgrowth and active synapse formation on self-assembling peptide scaffolds
Holmes, T. C., de Lacalle, S., Su, X., Liu, G., Rich, A., & Zhang, S. (2000) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.97.12.6728 · Cited by 1,124
Structure and Mechanism of Alkaline Phosphatase
Coleman, J. E. (1992) · Annual Review of Biophysics and Biomolecular Structure · doi:10.1146/annurev.bb.21.060192.002301 · Cited by 883
d -Amino Acids Trigger Biofilm Disassembly
Kolodkin-Gal, I., Romero, D., Cao, S., Clardy, J., Kolter, R., & Losick, R. (2010) · Science · doi:10.1126/science.1188628 · Cited by 874
Clinical toxicities encountered with paclitaxel (Taxol).
Rowinsky, E. K., Eisenhauer, E. A., Chaudhry, V., Sg, A., & Rc, D. (1993) · PubMed · Cited by 692
Enzymatic Hydrogelation of Small Molecules
Yang, Z., Liang, G., & Xu, B. (2008) · Accounts of Chemical Research · doi:10.1021/ar7001914 · Cited by 661
Self-citationEnzymatic Formation of Supramolecular Hydrogels
Yang, Z., Gu, H., Fu, D., Gao, P., Lam, J. K., & Xu, B. (2004) · Advanced Materials · doi:10.1002/adma.200400340 · Cited by 602
Self-citationFrangioni, J. V., Beahm, P. H., Shifrin, V., Jost, C. A., & Neel, B. G. (1992) · Cell · doi:10.1016/0092-8674(92)90190-n · Cited by 595
Semi-wet peptide/protein array using supramolecular hydrogel
Kiyonaka, S., Sada, K., Yoshimura, I., Shinkai, S., Kato, N., & Hamachi, I. (2004) · Nature Materials · doi:10.1038/nmat1034 · Cited by 560
Enzyme-assisted self-assembly under thermodynamic control
Williams, R. J., Smith, A. M., Collins, R. F., Hodson, N. W., Das, A. K., & Ulijn, R. V. (2008) · Nature Nanotechnology · doi:10.1038/nnano.2008.378 · Cited by 527
Supramolecular Nanostructures Formed by Anticancer Drug Assembly
Cheetham, A. G., Zhang, P., Lin, Y.-A., Lock, L. L., & Cui, H. (2013) · Journal of the American Chemical Society · doi:10.1021/ja3115983 · Cited by 517
Enzyme-Triggered Self-Assembly of Peptide Hydrogels via Reversed Hydrolysis
Toledano, S., Williams, R. J., Jayawarna, V., & Ulijn, R. V. (2006) · Journal of the American Chemical Society · doi:10.1021/ja056549l · Cited by 512
Molecular hydrogels of therapeutic agents
Zhao, F., Ma, M. L., & Xu, B. (2009) · Chemical Society Reviews · doi:10.1039/b806410p · Cited by 493
Self-citationYang, Z., Liang, G., Wang, L., & Xu, B. (2006) · Journal of the American Chemical Society · doi:10.1021/ja057412y · Cited by 485
Self-citationImaging enzyme-triggered self-assembly of small molecules inside live cells
Gao, Y., Shi, J., Yuan, D., & Xu, B. (2012) · Nature Communications · doi:10.1038/ncomms2040 · Cited by 475
Self-citationEnzymatic Formation of Supramolecular Hydrogels
Yang, Z., Gu, H., Fu, D., Gao, P., Lam, J. K., & Xu, B. (2006) · Advanced Materials · doi:10.1002/adma.200690020 · Cited by 452
Self-citationXing, B., Yu, C.-W., Chow, K.-H., Ho, P.-L., Fu, D., & Xu, B. (2002) · Journal of the American Chemical Society · doi:10.1021/ja028539f · Cited by 407
Self-citationGao, Y., Kuang, Y., Guo, Z.-F., Guo, Z., Krauss, I. J., & Xu, B. (2009) · Journal of the American Chemical Society · doi:10.1021/ja904411z · Cited by 403
Self-citationLight-Activated Hydrogel Formation via the Triggered Folding and Self-Assembly of a Designed Peptide
Haines, L. A., Rajagopal, K., Ozbas, B., Salick, D. A., Pochan, D. J., & Schneider, J. P. (2005) · Journal of the American Chemical Society · doi:10.1021/ja054719o · Cited by 382
Ma, M., Kuang, Y., Gao, Y., Zhang, Y., Gao, P., & Xu, B. (2010) · Journal of the American Chemical Society · doi:10.1021/ja9088764 · Cited by 375
Self-citationGaller, K. M., Aulisa, L., Regan, K. R., D’Souza, R. N., & Hartgerink, J. D. (2010) · Journal of the American Chemical Society · doi:10.1021/ja910481t · Cited by 339
Supramolecular Hydrogel Exhibiting Four Basic Logic Gate Functions To Fine-Tune Substance Release
Komatsu, H., Matsumoto, S., Tamaru, S.-I., Kaneko, K., Ikeda, M., & Hamachi, I. (2009) · Journal of the American Chemical Society · doi:10.1021/ja8098239 · Cited by 305
Vemula, P. K., Li, J., & John, G. (2006) · Journal of the American Chemical Society · doi:10.1021/ja062650u · Cited by 300
Self-citationIntracellular Enzymatic Formation of Nanofibers Results in Hydrogelation and Regulated Cell Death
Yang, Z. M., Xu, K. M., Guo, Z. F., Guo, Z. H., & Xu, B. (2007) · Advanced Materials · doi:10.1002/adma.200701971 · Cited by 286
Self-citationLi, J., Kuang, Y., Gao, Y., Du, X., Shi, J., & Xu, B. (2013) · Journal of the American Chemical Society · doi:10.1021/ja310019x · Cited by 283
Self-citationSupramolecular Hydrogel of a d-Amino Acid Dipeptide for Controlled Drug Release in Vivo
Liang, G., Yang, Z., Zhang, R., Li, L., Fan, Y., Kuang, Y., Gao, Y., Wang, T., Lu, W. W., & Xu, B. (2009) · Langmuir · doi:10.1021/la804271d · Cited by 277
Self-citationPotent D-peptide inhibitors of HIV-1 entry
Welch, B. D., VanDemark, A. P., Heroux, A., Hill, C. P., & Kay, M. S. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0708109104 · Cited by 250
Liu, M., Li, C., Pazgier, M., Li, C., Mao, Y., Lv, Y., Gu, B., Wei, G., Yuan, W., Zhan, C., et al. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1008930107 · Cited by 228
d-Glucosamine-based supramolecular hydrogels to improve wound healing
Yang, Z., Liang, G., Ma, M., Abbah, A. S., Lu, W. W., & Xu, B. (2007) · Chem. Commun. · doi:10.1039/b616563j · Cited by 222
Self-citationA DNA Aptamer as a New Target-Specific Chiral Selector for HPLC
Michaud, M., Jourdan, E., Villet, A., Ravel, A., Grosset, C., & Peyrin, E. (2003) · Journal of the American Chemical Society · doi:10.1021/ja034483t · Cited by 198
Rational Design of Transglutaminase Substrate Peptides for Rapid Enzymatic Formation of Hydrogels
Hu, B.-H., & Messersmith, P. B. (2003) · Journal of the American Chemical Society · doi:10.1021/ja038593b · Cited by 198
Wada, A., Tamaru, S.-I., Ikeda, M., & Hamachi, I. (2009) · Journal of the American Chemical Society · doi:10.1021/ja900500j · Cited by 177
The inhibition of tumor growth and metastasis by self-assembled nanofibers of taxol
Wang, H., Wei, J., Yang, C., Zhao, H., Li, D., Yin, Z., & Yang, Z. (2012) · Biomaterials · doi:10.1016/j.biomaterials.2012.04.047 · Cited by 175
Self-citationStereoselective Interactions of Peptide Inhibitors with the β-Amyloid Peptide
Chalifour, R. J., McLaughlin, R. W., Lavoie, L., Morissette, C., Tremblay, N., Boulé, M., Sarazin, P., Stéa, D., Lacombe, D., Tremblay, P., et al. (2003) · Journal of Biological Chemistry · doi:10.1074/jbc.m212694200 · Cited by 163
Schnepp, Z., Gonzalez-McQuire, R., & Mann, S. (2006) · Advanced Materials · doi:10.1002/adma.200502545 · Cited by 156
Self-assembled prodrugs: An enzymatically triggered drug-delivery platform
Vemula, P. K., Cruikshank, G. A., Karp, J. M., & John, G. (2008) · Biomaterials · doi:10.1016/j.biomaterials.2008.09.045 · Cited by 154
Li, X., Kuang, Y., Shi, J., Gao, Y., Lin, H., & Xu, B. (2011) · Journal of the American Chemical Society · doi:10.1021/ja208456k · Cited by 135
Self-citationCai, W., Wang, G.-T., Du, P., Wang, R., Jiang, X., & Li, Z. (2008) · Journal of the American Chemical Society · doi:10.1021/ja8043322 · Cited by 124
Enzyme‐instructed self‐assembly of peptide derivatives to form nanofibers and hydrogels
Gao, Y., Yang, Z., Kuang, Y., Ma, M., Li, J., Zhao, F., & Xu, B. (2010) · Biopolymers · doi:10.1002/bip.21321 · Cited by 112
Self-citationA Self-Assembled Delivery Platform with Post-production Tunable Release Rate
Boekhoven, J., Koot, M., Wezendonk, T. A., Eelkema, R., & van Esch, J. H. (2012) · Journal of the American Chemical Society · doi:10.1021/ja3051876 · Cited by 102
D-peptides as immunogens and diagnostic reagents
Van Regenmortel, M. H., & Muller, S. (1998) · Current Opinion in Biotechnology · doi:10.1016/s0958-1669(98)80011-6 · Cited by 99
Structure and Dynamics of a Molecular Hydrogel Derived from a Tripodal Cholamide
Mukhopadhyay, S., Maitra, U., ., I., Krishnamoorthy, G., Schmidt, J., & Talmon, Y. (2004) · Journal of the American Chemical Society · doi:10.1021/ja046788t · Cited by 98
Li, X., Du, X., Li, J., Gao, Y., Pan, Y., Shi, J., Zhou, N., & Xu, B. (2012) · Langmuir · doi:10.1021/la302583a · Cited by 95
Self-citationThe in vivo performance of an enzyme-assisted self-assembled peptide/protein hydrogel
Williams, R. J., Hall, T. E., Glattauer, V., White, J., Pasic, P. J., Sørensen, A. B., Waddington, L. J., McLean, K. M., Currie, P. D., & Hartley, P. G. (2011) · Biomaterials · doi:10.1016/j.biomaterials.2011.03.078 · Cited by 82
Separation of proteins using supramolecular gel electrophoresis
Yamamichi, S., Jinno, Y., Haraya, N., Oyoshi, T., Tomitori, H., Kashiwagi, K., & Yamanaka, M. (2011) · Chemical Communications · doi:10.1039/c1cc13826j · Cited by 57
Gao, Y., Long, M. J. C., Shi, J., Hedstrom, L., & Xu, B. (2012) · Chemical Communications · doi:10.1039/c2cc33631f · Cited by 53
Self-citationBiocatalytic reactions: selected highlights
Rajagopalan, A., & Kroutil, W. (2011) · Materials Today · doi:10.1016/s1369-7021(11)70086-4 · Cited by 35
Synthetic D-amino acid peptide inhibits tumor cell motility on laminin-5
Sroka, T. C. (2006) · Carcinogenesis · doi:10.1093/carcin/bgl005 · Cited by 34
Reich, Z., Schramm, O., Brumfeld, V., & Minsky, A. (1996) · Journal of the American Chemical Society · doi:10.1021/ja9600237 · Cited by 25
New Strategy for the Generation of Specific d-Peptide Amyloid Inhibitors
Esteras‐Chopo, A., Pastor, M. T., Serrano, L. G., & de la Paz, M. L. (2008) · Journal of Molecular Biology · doi:10.1016/j.jmb.2008.01.028 · Cited by 24
Nair, D. T., Kaur, K. J., Singh, K., Mukherjee, P., Rajagopal, D., George, A., Bal, V., Rath, S., Rao, K. V. S., & Salunke, D. M. (2003) · The Journal of Immunology · doi:10.4049/jimmunol.170.3.1362 · Cited by 23
Morii, T., Tanaka, T., Sato, S., Hagihara, M., Aizawa, Y., & Makino, K. (2001) · Journal of the American Chemical Society · doi:10.1021/ja017078f · Cited by 13
Cited by
Supramolecular Chirality in Self-Assembled Systems
Liu, M., Zhang, L., & Wang, T. (2015) · Chemical Reviews · doi:10.1021/cr500671p · Cited by 2,250
Functional π-Gelators and Their Applications
Babu, S. S., Praveen, V. K., & Ajayaghosh, A. (2014) · Chemical Reviews · doi:10.1021/cr400195e · Cited by 1,725
Three-dimensional in vitro cell culture models in drug discovery and drug repositioning
Langhans, S. A. (2018) · Frontiers in Pharmacology · doi:10.3389/fphar.2018.00006 · Cited by 1,522
Lu, P., Ruan, D., Huang, M., Tian, M., Zhu, K., Gan, Z., & Xiao, Z. (2024) · Signal Transduction and Targeted Therapy · doi:10.1038/s41392-024-01852-x · Cited by 667
Supramolecular hydrogels: synthesis, properties and their biomedical applications
Dong, R., Pang, Y., Su, Y., & Zhu, X. (2015) · Biomaterials Science · doi:10.1039/c4bm00448e · Cited by 302
Metadata
- Authors
- Li, J., Gao, Y., Kuang, Y., Shi, J., Du, X., Zhou, J., Wang, H., Yang, Z., & Xu, B.
- Venue
- Journal of the American Chemical Society
- Publisher
- American Chemical Society (ACS)
- Published
- 2013-06-21
- Volume
- 135
- Issue
- 26
- Pages
- 9907-9914
- ISSN
- 0002-7863 (ISSN-L)
- 1520-5126
- OpenAlex
- W2074363870
- Cited by
- 254
- References
- 58
- FWCI
- 11.02
- Type
- journal article
- Language
- en
- Open access
- green
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.