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Host genotype and age shape the leaf and root microbiomes of a wild perennial plant
Open accessAbstract
Bacteria living on and in leaves and roots influence many aspects of plant health, so the extent of a plant’s genetic control over its microbiota is of great interest to crop breeders and evolutionary biologists. Laboratory-based studies, because they poorly simulate true environmental heterogeneity, may misestimate or totally miss the influence of certain host genes on the microbiome. Here we report a large-scale field experiment to disentangle the effects of genotype, environment, age and year of harvest on bacterial communities associated with leaves and roots of Boechera stricta(Brassicaceae), a perennial wild mustard. Host genetic control of the microbiome is evident in leaves but not roots, and varies substantially among sites. Microbiome composition also shifts as plants age. Furthermore, a large proportion of leaf bacterial groups are shared with roots, suggesting inoculation from soil. Our results demonstrate how genotype-by-environment interactions contribute to the complexity of microbiome assembly in natural environments.
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Metadata
- Authors
- Wagner, M. R., Lundberg, D. S., del Rio, T. G., Tringe, S. G., Dangl, J. L., & Mitchell-Olds, T.
- Venue
- Nature Communications
- Published
- 2016-07-12
- Volume
- 7
- Issue
- 1
- Pages
- 12151-12151
- ISSN
- 2041-1723 (ISSN-L)
- OpenAlex
- W2464547619
- Cited by
- 990
- References
- 63
- FWCI
- 68.76
- Type
- journal article
- Language
- en
- Open access
- gold
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